ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32j09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 66 9e-08
2dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic D... 66 9e-08
3dbj|AK102072.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 9e-08
4dbj|AK099544.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 9e-08
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
6dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
7dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
8ref|XM_482265.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.085
9emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4,... 46 0.085
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.085
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.085
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.085
13gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) ch... 46 0.085
14dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.085
15gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.085
16gb|AC183300.4| Pan troglodytes BAC clone CH251-263P14 from chrom... 44 0.34
17gb|AC122916.4| Mus musculus BAC clone RP23-28F1 from 5, complete... 42 1.3
18gb|AC122875.2| Mus musculus BAC clone RP23-113B22 from 5, comple... 42 1.3
19emb|AL136170.14| Human DNA sequence from clone RP5-1198E17 on ch... 42 1.3
20gb|AC087468.11| Homo sapiens chromosome 15, clone RP11-255M6, co... 42 1.3
21emb|BX511157.10| Zebrafish DNA sequence from clone DKEY-197M14 i... 42 1.3
22emb|AL935034.18| Zebrafish DNA sequence from clone CH211-160A3 i... 42 1.3
23emb|BX005151.5| Zebrafish DNA sequence from clone CH211-11M20, c... 42 1.3
24emb|AL935282.14| Zebrafish DNA sequence from clone CH211-281O21 ... 42 1.3
25emb|BX470230.5| Zebrafish DNA sequence from clone CH211-284B12 i... 42 1.3
26emb|AL954190.5| Zebrafish DNA sequence from clone DKEY-30O6 in l... 42 1.3
27emb|AL691487.9| Human DNA sequence from clone RP11-565A8 on chro... 42 1.3
28gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, comp... 40 5.2
29gb|AC137691.7| Mus musculus chromosome 13, clone RP23-104G24, co... 40 5.2
30gb|AC129561.13| Mus musculus chromosome 1, clone RP23-192P10, co... 40 5.2
31emb|BX005403.15| Zebrafish DNA sequence from clone DKEY-81J11 in... 40 5.2
32gb|AC126027.4| Mus musculus BAC clone RP24-490F3 from chromosome... 40 5.2
33gb|AC122213.4| Mus musculus BAC clone RP23-104C8 from chromosome... 40 5.2
34gb|AC011248.8| Homo sapiens 12 BAC RP11-14P21 (Roswell Park Canc... 40 5.2
35gb|AC113969.7| Mus musculus chromosome 8, clone RP23-122L19, com... 40 5.2
36gb|AC004983.3| Homo sapiens PAC clone RP5-1163J12 from 7, comple... 40 5.2
37gb|AC141115.22| Medicago truncatula clone mth2-16b23, complete s... 40 5.2
38gb|AC137832.40| Medicago truncatula clone mth2-22i17, complete s... 40 5.2
39gb|AC124969.12| Medicago truncatula clone mth2-15o15, complete s... 40 5.2
40gb|AC130808.36| Medicago truncatula clone mth2-34k9, complete se... 40 5.2
41emb|AL445530.19| Human DNA sequence from clone RP1-61F10 on chro... 40 5.2
42emb|BX897682.11| Zebrafish DNA sequence from clone DKEY-29N3 in ... 40 5.2
43gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's H... 40 5.2
44emb|BX927179.9| Zebrafish DNA sequence from clone CH211-194N20 i... 40 5.2
45gb|AC064807.7| Homo sapiens chromosome 8, clone RP11-546K22, com... 40 5.2
46gb|AC067932.9| Homo sapiens chromosome 8, clone RP11-78F5, compl... 40 5.2
47gb|AC010683.10| Homo sapiens BAC clone RP11-364M6 from 4, comple... 40 5.2
48emb|BX897687.7| Zebrafish DNA sequence from clone DKEY-151O8, co... 40 5.2
49gb|AC092186.1|AC092186 Drosophila melanogaster, chromosome 2L, r... 40 5.2
50gb|AC098824.3| Homo sapiens BAC clone RP11-489G24 from 2, comple... 40 5.2
51gb|DQ286835.1| Aedes aegypti hexokinase gene, partial cds 40 5.2
52gb|AC118935.7| Mus musculus chromosome 5, clone RP24-172P15, com... 40 5.2
53gb|AE003583.3| Drosophila melanogaster chromosome 2L, section 8 ... 40 5.2
54gb|AC004246.1|AC004246 Drosophila melanogaster DNA sequence (P1 ... 40 5.2
55emb|AL928650.5| Zebrafish DNA sequence from clone CH211-160D14 i... 40 5.2
56gb|AC122473.4| Mus musculus BAC clone RP24-326I7 from 12, comple... 40 5.2
57gb|AC004315.1|AC004315 Drosophila melanogaster (P1 DS03279 (D209... 40 5.2
58emb|AL928981.7| Mouse DNA sequence from clone RP23-54O14 on chro... 40 5.2
59emb|AL831760.3| Mouse DNA sequence from clone RP23-382F2 on chro... 40 5.2 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                                
Query: 343      aacaagctgctcatataatggaagatgattcttanaaacaaagaccct 390
                |||||||||||||||||||| |||||||||||||  |||||| |||||
Sbjct: 23173133 aacaagctgctcatataatgaaagatgattcttaggaacaaaaaccct 23173180
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>dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0710A02
          Length = 157201

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                              
Query: 343    aacaagctgctcatataatggaagatgattcttanaaacaaagaccct 390
              |||||||||||||||||||| |||||||||||||  |||||| |||||
Sbjct: 105292 aacaagctgctcatataatgaaagatgattcttaggaacaaaaaccct 105339
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>dbj|AK102072.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082G14, full
            insert sequence
          Length = 3676

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 343  aacaagctgctcatataatggaagatgattcttanaaacaaagaccct 390
            |||||||||||||||||||| |||||||||||||  |||||| |||||
Sbjct: 3130 aacaagctgctcatataatgaaagatgattcttaggaacaaaaaccct 3083
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>dbj|AK099544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013032O15, full
            insert sequence
          Length = 3572

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 343  aacaagctgctcatataatggaagatgattcttanaaacaaagaccct 390
            |||||||||||||||||||| |||||||||||||  |||||| |||||
Sbjct: 3089 aacaagctgctcatataatgaaagatgattcttaggaacaaaaaccct 3042
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 348     gctgctcatataatggaagatgattcttanaaacaaa 384
               |||||||||| ||||||||||||||||||  ||||||
Sbjct: 5903257 gctgctcatacaatggaagatgattcttaggaacaaa 5903293
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>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0056C19
          Length = 147739

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 348   gctgctcatataatggaagatgattcttanaaacaaa 384
             |||||||||| ||||||||||||||||||  ||||||
Sbjct: 81478 gctgctcatacaatggaagatgattcttaggaacaaa 81514
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>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0544H11
          Length = 178376

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 348    gctgctcatataatggaagatgattcttanaaacaaa 384
              |||||||||| ||||||||||||||||||  ||||||
Sbjct: 133059 gctgctcatacaatggaagatgattcttaggaacaaa 133095
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>ref|XM_482265.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 921

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 348 gctgctcatataatggaagatgattct 374
           |||||||||| ||||||||||||||||
Sbjct: 895 gctgctcatacaatggaagatgattct 869
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>emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K06,
              complete sequence
          Length = 129608

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 348    gctgctcatataatggaagatgattct 374
              |||||||||| ||||||||||||||||
Sbjct: 115006 gctgctcatacaatggaagatgattct 114980
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 348     gctgctcatataatggaagatgattct 374
               |||||||||| ||||||||||||||||
Sbjct: 4724873 gctgctcatacaatggaagatgattct 4724847
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 348      gctgctcatataatggaagatgattct 374
                |||||||||| ||||||||||||||||
Sbjct: 15642463 gctgctcatacaatggaagatgattct 15642489
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 348      gctgctcatataatggaagatgattct 374
                |||||||||| ||||||||||||||||
Sbjct: 19120460 gctgctcatacaatggaagatgattct 19120434
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>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20,
              complete sequence
          Length = 193119

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 348    gctgctcatataatggaagatgattct 374
              |||||||||| ||||||||||||||||
Sbjct: 129829 gctgctcatacaatggaagatgattct 129855
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>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0086F04
          Length = 163579

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 348   gctgctcatataatggaagatgattct 374
             |||||||||| ||||||||||||||||
Sbjct: 42825 gctgctcatacaatggaagatgattct 42799
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 348      gctgctcatataatggaagatgattct 374
                |||||||||| ||||||||||||||||
Sbjct: 15650704 gctgctcatacaatggaagatgattct 15650730
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>gb|AC183300.4| Pan troglodytes BAC clone CH251-263P14 from chromosome 4, complete
             sequence
          Length = 171121

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 100   ataatatgggataattacattt 121
             ||||||||||||||||||||||
Sbjct: 64668 ataatatgggataattacattt 64689
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>gb|AC122916.4| Mus musculus BAC clone RP23-28F1 from 5, complete sequence
          Length = 231319

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 7  agcccattgctgaaaacatgggaat 31
          |||||||||||||| ||||||||||
Sbjct: 34 agcccattgctgaatacatgggaat 58
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>gb|AC122875.2| Mus musculus BAC clone RP23-113B22 from 5, complete sequence
          Length = 152406

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 7     agcccattgctgaaaacatgggaat 31
             |||||||||||||| ||||||||||
Sbjct: 26366 agcccattgctgaatacatgggaat 26342
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>emb|AL136170.14| Human DNA sequence from clone RP5-1198E17 on chromosome 1 Contains the
             3' end of a novel gene (KIAA2025), two novel genes
             (MGC2629), the GAS5 gene for growth arrest-specific 5, the
             SERPINC1 gene for serine (or cysteine) proteinase
             inhibitor clade C (antithrombin) member 1 and a CpG
             island, complete sequence
          Length = 129441

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 214   acttcccataagttaattgcatgaa 238
             ||||||||||||||| |||||||||
Sbjct: 39792 acttcccataagttatttgcatgaa 39768
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>gb|AC087468.11| Homo sapiens chromosome 15, clone RP11-255M6, complete sequence
          Length = 168693

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   gggataattacattttttaat 127
             |||||||||||||||||||||
Sbjct: 45615 gggataattacattttttaat 45595
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>emb|BX511157.10| Zebrafish DNA sequence from clone DKEY-197M14 in linkage group 5,
              complete sequence
          Length = 159528

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 100    ataatatgggataattacattttttaatt 128
              |||||| ||||||||||||||||| ||||
Sbjct: 121344 ataataagggataattacatttttaaatt 121372
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>emb|AL935034.18| Zebrafish DNA sequence from clone CH211-160A3 in linkage group 12,
             complete sequence
          Length = 171213

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 112   aattacattttttaatttaca 132
             |||||||||||||||||||||
Sbjct: 82142 aattacattttttaatttaca 82122
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>emb|BX005151.5| Zebrafish DNA sequence from clone CH211-11M20, complete sequence
          Length = 142257

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 114  ttacattttttaatttacagt 134
            |||||||||||||||||||||
Sbjct: 4675 ttacattttttaatttacagt 4695
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>emb|AL935282.14| Zebrafish DNA sequence from clone CH211-281O21 in linkage group 2,
             complete sequence
          Length = 173134

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 100   ataatatgggataattacatttttt 124
             |||||||||| ||||||||||||||
Sbjct: 36330 ataatatggggtaattacatttttt 36306
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>emb|BX470230.5| Zebrafish DNA sequence from clone CH211-284B12 in linkage group 4,
              complete sequence
          Length = 173564

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 110    ataattacattttttaattta 130
              |||||||||||||||||||||
Sbjct: 169615 ataattacattttttaattta 169595
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>emb|AL954190.5| Zebrafish DNA sequence from clone DKEY-30O6 in linkage group 4, complete
              sequence
          Length = 144062

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 110    ataattacattttttaattta 130
              |||||||||||||||||||||
Sbjct: 133739 ataattacattttttaattta 133719
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>emb|AL691487.9| Human DNA sequence from clone RP11-565A8 on chromosome 1, complete
             sequence
          Length = 62125

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 214   acttcccataagttaattgcatgaa 238
             ||||||||||||||| |||||||||
Sbjct: 38681 acttcccataagttatttgcatgaa 38705
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>gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, complete sequence
          Length = 203728

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   attacattttttaatttaca 132
             ||||||||||||||||||||
Sbjct: 11360 attacattttttaatttaca 11379
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>gb|AC137691.7| Mus musculus chromosome 13, clone RP23-104G24, complete sequence
          Length = 204418

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    gtatattttttaacaagctg 351
              ||||||||||||||||||||
Sbjct: 162878 gtatattttttaacaagctg 162897
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>gb|AC129561.13| Mus musculus chromosome 1, clone RP23-192P10, complete sequence
          Length = 217279

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 350    tgctcatataatggaagatgattc 373
              ||||||||||||||| ||||||||
Sbjct: 169722 tgctcatataatggatgatgattc 169699
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>emb|BX005403.15| Zebrafish DNA sequence from clone DKEY-81J11 in linkage group 17,
             complete sequence
          Length = 74369

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   ataattacattttttaattt 129
             ||||||||||||||||||||
Sbjct: 31538 ataattacattttttaattt 31519
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>gb|AC126027.4| Mus musculus BAC clone RP24-490F3 from chromosome 18, complete sequence
          Length = 172078

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   ataattacattttttaattt 129
             ||||||||||||||||||||
Sbjct: 21663 ataattacattttttaattt 21682
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>gb|AC122213.4| Mus musculus BAC clone RP23-104C8 from chromosome 18, complete sequence
          Length = 188125

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    ataattacattttttaattt 129
              ||||||||||||||||||||
Sbjct: 173989 ataattacattttttaattt 174008
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>gb|AC011248.8| Homo sapiens 12 BAC RP11-14P21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 111312

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   tttttccacatttcatcttt 291
             ||||||||||||||||||||
Sbjct: 42078 tttttccacatttcatcttt 42059
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>gb|AC113969.7| Mus musculus chromosome 8, clone RP23-122L19, complete sequence
          Length = 182258

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   attacattttttaatttaca 132
             ||||||||||||||||||||
Sbjct: 11048 attacattttttaatttaca 11029
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>gb|AC004983.3| Homo sapiens PAC clone RP5-1163J12 from 7, complete sequence
          Length = 124821

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   tgcatgaattcagtggaatt 250
             ||||||||||||||||||||
Sbjct: 78293 tgcatgaattcagtggaatt 78312
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>gb|AC141115.22| Medicago truncatula clone mth2-16b23, complete sequence
          Length = 126187

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    atatgtgcaatgcactgatt 179
              ||||||||||||||||||||
Sbjct: 117687 atatgtgcaatgcactgatt 117668
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>gb|AC137832.40| Medicago truncatula clone mth2-22i17, complete sequence
          Length = 127688

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   taattacattttttaattta 130
             ||||||||||||||||||||
Sbjct: 42356 taattacattttttaattta 42375
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>gb|AC124969.12| Medicago truncatula clone mth2-15o15, complete sequence
          Length = 134863

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   taattacattttttaattta 130
             ||||||||||||||||||||
Sbjct: 57107 taattacattttttaattta 57126
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>gb|AC130808.36| Medicago truncatula clone mth2-34k9, complete sequence
          Length = 113091

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   taattacattttttaattta 130
             ||||||||||||||||||||
Sbjct: 23426 taattacattttttaattta 23445
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>emb|AL445530.19| Human DNA sequence from clone RP1-61F10 on chromosome 6 Contains part
             of the RNGTT gene for RNA guanylyltransferase and
             5'-phosphatase (mRNA capping enzyme, CAP1A), complete
             sequence
          Length = 57464

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   ataattacattttttaattt 129
             ||||||||||||||||||||
Sbjct: 40817 ataattacattttttaattt 40836
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>emb|BX897682.11| Zebrafish DNA sequence from clone DKEY-29N3 in linkage group 3,
             complete sequence
          Length = 92674

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   taattacattttttaattta 130
             ||||||||||||||||||||
Sbjct: 30324 taattacattttttaattta 30343
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>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 147560

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 112   aattacattttttaatttacagtt 135
             ||||||||||||||||||| ||||
Sbjct: 87652 aattacattttttaatttaaagtt 87629
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>emb|BX927179.9| Zebrafish DNA sequence from clone CH211-194N20 in linkage group 5,
             complete sequence
          Length = 121960

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 100   ataatatgggataattacattttt 123
             |||||| |||||||||||||||||
Sbjct: 36654 ataataagggataattacattttt 36631
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>gb|AC064807.7| Homo sapiens chromosome 8, clone RP11-546K22, complete sequence
          Length = 203270

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    accaaactacagataatgag 75
             ||||||||||||||||||||
Sbjct: 99139 accaaactacagataatgag 99120
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>gb|AC067932.9| Homo sapiens chromosome 8, clone RP11-78F5, complete sequence
          Length = 163777

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     accaaactacagataatgag 75
              ||||||||||||||||||||
Sbjct: 103993 accaaactacagataatgag 104012
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>gb|AC010683.10| Homo sapiens BAC clone RP11-364M6 from 4, complete sequence
          Length = 175283

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 114    ttacattttttaatttacagttga 137
              ||||||||||||||||| ||||||
Sbjct: 115464 ttacattttttaatttagagttga 115487
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>emb|BX897687.7| Zebrafish DNA sequence from clone DKEY-151O8, complete sequence
          Length = 208227

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    taattacattttttaattta 130
              ||||||||||||||||||||
Sbjct: 203757 taattacattttttaattta 203738
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>gb|AC092186.1|AC092186 Drosophila melanogaster, chromosome 2L, region 22D-22E, BAC clone
              BACR22P10, complete sequence
          Length = 184650

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    gggataattacattttttaa 126
              ||||||||||||||||||||
Sbjct: 132117 gggataattacattttttaa 132136
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>gb|AC098824.3| Homo sapiens BAC clone RP11-489G24 from 2, complete sequence
          Length = 157758

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    aacctatttccagaaacata 102
             ||||||||||||||||||||
Sbjct: 15222 aacctatttccagaaacata 15241
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>gb|DQ286835.1| Aedes aegypti hexokinase gene, partial cds
          Length = 4978

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 119  ttttttaatttacagttgaa 138
            ||||||||||||||||||||
Sbjct: 1343 ttttttaatttacagttgaa 1362
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>gb|AC118935.7| Mus musculus chromosome 5, clone RP24-172P15, complete sequence
          Length = 168119

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    attttttaatttacagttga 137
              ||||||||||||||||||||
Sbjct: 120579 attttttaatttacagttga 120560
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>gb|AE003583.3| Drosophila melanogaster chromosome 2L, section 8 of 83 of the complete
              sequence
          Length = 303641

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    gggataattacattttttaa 126
              ||||||||||||||||||||
Sbjct: 142326 gggataattacattttttaa 142345
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>gb|AC004246.1|AC004246 Drosophila melanogaster DNA sequence (P1 DS00564 (D140)), complete
             sequence
          Length = 50279

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   gggataattacattttttaa 126
             ||||||||||||||||||||
Sbjct: 49944 gggataattacattttttaa 49925
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>emb|AL928650.5| Zebrafish DNA sequence from clone CH211-160D14 in linkage group 17,
              complete sequence
          Length = 178563

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     caaactacagataatgagtt 77
              ||||||||||||||||||||
Sbjct: 155187 caaactacagataatgagtt 155206
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>gb|AC122473.4| Mus musculus BAC clone RP24-326I7 from 12, complete sequence
          Length = 165740

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   acattttttaatttacagtt 135
             ||||||||||||||||||||
Sbjct: 45131 acattttttaatttacagtt 45150
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>gb|AC004315.1|AC004315 Drosophila melanogaster (P1 DS03279 (D209)) DNA sequence, complete
             sequence
          Length = 35867

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   gggataattacattttttaa 126
             ||||||||||||||||||||
Sbjct: 35618 gggataattacattttttaa 35637
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>emb|AL928981.7| Mouse DNA sequence from clone RP23-54O14 on chromosome 2, complete
             sequence
          Length = 110096

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   taattacattttttaattta 130
             ||||||||||||||||||||
Sbjct: 46263 taattacattttttaattta 46244
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>emb|AL831760.3| Mouse DNA sequence from clone RP23-382F2 on chromosome X, complete
             sequence
          Length = 138140

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   attacattttttaatttaca 132
             ||||||||||||||||||||
Sbjct: 38487 attacattttttaatttaca 38468


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,189,531
Number of Sequences: 3902068
Number of extensions: 5189531
Number of successful extensions: 112600
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112286
Number of HSP's gapped (non-prelim): 314
length of query: 392
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 370
effective length of database: 17,147,199,772
effective search space: 6344463915640
effective search space used: 6344463915640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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