ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags32j06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475628.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1509 Score = 391 bits (197), Expect = e-105 Identities = 377/437 (86%) Strand = Plus / Minus Query: 214 gcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcg 273 |||||||||||||| ||||||||||| ||||| || ||||| || || ||||| ||||| Sbjct: 1472 gcctccttcagggcttcgctcactgttggatgcgcatggcatgtccgtgcaatatcctca 1413 Query: 274 ctggatgctccatactgaagggcaagcacagcctcgtggatgatctcgcccgcaccaggg 333 || ||||||||||||||||| |||||||| ||||| ||||| ||||| || ||| |||| Sbjct: 1412 ctagatgctccatactgaagtgcaagcaccgcctcatggattatctcacctgcattaggg 1353 Query: 334 gacattatgtgtacaccgaggattctgtcagtttccttctcagatatcaccttcaccatc 393 | |||||| ||||||||||||||||| || || |||||||||| | ||||| |||| | Sbjct: 1352 gccattatatgtacaccgaggattctatcggtctccttctcagccactaccttgaccaac 1293 Query: 394 ccttcggcatcatcgattgccttcgcccgactgtttgccagcagggggaacttgccaacc 453 ||||| |||||||| |||||||| || || ||||| |||| |||||||||||| |||||| Sbjct: 1292 ccttcagcatcatcaattgcctttgcacggctgttggccaacagggggaacttcccaacc 1233 Query: 454 tggtaggctacaccagatgccttgacctgttcctctgtcttgccaacggaggccacctct 513 |||||||| || || ||||||||||||||||| || ||||| ||||| || ||||||||| Sbjct: 1232 tggtaggccactcctgatgccttgacctgttcttccgtcttcccaacagaagccacctct 1173 Query: 514 gggtgtgtgtacaccaccccaggtacagtgtcatagtcaacatggccctccttccctgca 573 ||||||||||||||||| ||||||||||||||||| || || || || || || ||||| Sbjct: 1172 gggtgtgtgtacaccactccaggtacagtgtcataatctacgtgaccttctttacctgcg 1113 Query: 574 ataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggtccaggg 633 || ||||||||||| ||||||||||| || ||||| |||||||||||||| ||||||||| Sbjct: 1112 atgaattcaacacaggcaacaccatcttcttcagctttatgtgcaagcatgggtccaggg 1053 Query: 634 atcgcatctccaatcgc 650 ||||||||||||||||| Sbjct: 1052 atcgcatctccaatcgc 1036
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22, complete sequence Length = 177153 Score = 391 bits (197), Expect = e-105 Identities = 377/437 (86%) Strand = Plus / Minus Query: 214 gcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcg 273 |||||||||||||| ||||||||||| ||||| || ||||| || || ||||| ||||| Sbjct: 99016 gcctccttcagggcttcgctcactgttggatgcgcatggcatgtccgtgcaatatcctca 98957 Query: 274 ctggatgctccatactgaagggcaagcacagcctcgtggatgatctcgcccgcaccaggg 333 || ||||||||||||||||| |||||||| ||||| ||||| ||||| || ||| |||| Sbjct: 98956 ctagatgctccatactgaagtgcaagcaccgcctcatggattatctcacctgcattaggg 98897 Query: 334 gacattatgtgtacaccgaggattctgtcagtttccttctcagatatcaccttcaccatc 393 | |||||| ||||||||||||||||| || || |||||||||| | ||||| |||| | Sbjct: 98896 gccattatatgtacaccgaggattctatcggtctccttctcagccactaccttgaccaac 98837 Query: 394 ccttcggcatcatcgattgccttcgcccgactgtttgccagcagggggaacttgccaacc 453 ||||| |||||||| |||||||| || || ||||| |||| |||||||||||| |||||| Sbjct: 98836 ccttcagcatcatcaattgcctttgcacggctgttggccaacagggggaacttcccaacc 98777 Query: 454 tggtaggctacaccagatgccttgacctgttcctctgtcttgccaacggaggccacctct 513 |||||||| || || ||||||||||||||||| || ||||| ||||| || ||||||||| Sbjct: 98776 tggtaggccactcctgatgccttgacctgttcttccgtcttcccaacagaagccacctct 98717 Query: 514 gggtgtgtgtacaccaccccaggtacagtgtcatagtcaacatggccctccttccctgca 573 ||||||||||||||||| ||||||||||||||||| || || || || || || ||||| Sbjct: 98716 gggtgtgtgtacaccactccaggtacagtgtcataatctacgtgaccttctttacctgcg 98657 Query: 574 ataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggtccaggg 633 || ||||||||||| ||||||||||| || ||||| |||||||||||||| ||||||||| Sbjct: 98656 atgaattcaacacaggcaacaccatcttcttcagctttatgtgcaagcatgggtccaggg 98597 Query: 634 atcgcatctccaatcgc 650 ||||||||||||||||| Sbjct: 98596 atcgcatctccaatcgc 98580
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12, complete sequence Length = 156263 Score = 391 bits (197), Expect = e-105 Identities = 377/437 (86%) Strand = Plus / Minus Query: 214 gcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcg 273 |||||||||||||| ||||||||||| ||||| || ||||| || || ||||| ||||| Sbjct: 35165 gcctccttcagggcttcgctcactgttggatgcgcatggcatgtccgtgcaatatcctca 35106 Query: 274 ctggatgctccatactgaagggcaagcacagcctcgtggatgatctcgcccgcaccaggg 333 || ||||||||||||||||| |||||||| ||||| ||||| ||||| || ||| |||| Sbjct: 35105 ctagatgctccatactgaagtgcaagcaccgcctcatggattatctcacctgcattaggg 35046 Query: 334 gacattatgtgtacaccgaggattctgtcagtttccttctcagatatcaccttcaccatc 393 | |||||| ||||||||||||||||| || || |||||||||| | ||||| |||| | Sbjct: 35045 gccattatatgtacaccgaggattctatcggtctccttctcagccactaccttgaccaac 34986 Query: 394 ccttcggcatcatcgattgccttcgcccgactgtttgccagcagggggaacttgccaacc 453 ||||| |||||||| |||||||| || || ||||| |||| |||||||||||| |||||| Sbjct: 34985 ccttcagcatcatcaattgcctttgcacggctgttggccaacagggggaacttcccaacc 34926 Query: 454 tggtaggctacaccagatgccttgacctgttcctctgtcttgccaacggaggccacctct 513 |||||||| || || ||||||||||||||||| || ||||| ||||| || ||||||||| Sbjct: 34925 tggtaggccactcctgatgccttgacctgttcttccgtcttcccaacagaagccacctct 34866 Query: 514 gggtgtgtgtacaccaccccaggtacagtgtcatagtcaacatggccctccttccctgca 573 ||||||||||||||||| ||||||||||||||||| || || || || || || ||||| Sbjct: 34865 gggtgtgtgtacaccactccaggtacagtgtcataatctacgtgaccttctttacctgcg 34806 Query: 574 ataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggtccaggg 633 || ||||||||||| ||||||||||| || ||||| |||||||||||||| ||||||||| Sbjct: 34805 atgaattcaacacaggcaacaccatcttcttcagctttatgtgcaagcatgggtccaggg 34746 Query: 634 atcgcatctccaatcgc 650 ||||||||||||||||| Sbjct: 34745 atcgcatctccaatcgc 34729
>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08, complete sequence Length = 118049 Score = 391 bits (197), Expect = e-105 Identities = 377/437 (86%) Strand = Plus / Minus Query: 214 gcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcg 273 |||||||||||||| ||||||||||| ||||| || ||||| || || ||||| ||||| Sbjct: 36816 gcctccttcagggcttcgctcactgttggatgcgcatggcatgtccgtgcaatatcctca 36757 Query: 274 ctggatgctccatactgaagggcaagcacagcctcgtggatgatctcgcccgcaccaggg 333 || ||||||||||||||||| |||||||| ||||| ||||| ||||| || ||| |||| Sbjct: 36756 ctagatgctccatactgaagtgcaagcaccgcctcatggattatctcacctgcattaggg 36697 Query: 334 gacattatgtgtacaccgaggattctgtcagtttccttctcagatatcaccttcaccatc 393 | |||||| ||||||||||||||||| || || |||||||||| | ||||| |||| | Sbjct: 36696 gccattatatgtacaccgaggattctatcggtctccttctcagccactaccttgaccaac 36637 Query: 394 ccttcggcatcatcgattgccttcgcccgactgtttgccagcagggggaacttgccaacc 453 ||||| |||||||| |||||||| || || ||||| |||| |||||||||||| |||||| Sbjct: 36636 ccttcagcatcatcaattgcctttgcacggctgttggccaacagggggaacttcccaacc 36577 Query: 454 tggtaggctacaccagatgccttgacctgttcctctgtcttgccaacggaggccacctct 513 |||||||| || || ||||||||||||||||| || ||||| ||||| || ||||||||| Sbjct: 36576 tggtaggccactcctgatgccttgacctgttcttccgtcttcccaacagaagccacctct 36517 Query: 514 gggtgtgtgtacaccaccccaggtacagtgtcatagtcaacatggccctccttccctgca 573 ||||||||||||||||| ||||||||||||||||| || || || || || || ||||| Sbjct: 36516 gggtgtgtgtacaccactccaggtacagtgtcataatctacgtgaccttctttacctgcg 36457 Query: 574 ataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggtccaggg 633 || ||||||||||| ||||||||||| || ||||| |||||||||||||| ||||||||| Sbjct: 36456 atgaattcaacacaggcaacaccatcttcttcagctttatgtgcaagcatgggtccaggg 36397 Query: 634 atcgcatctccaatcgc 650 ||||||||||||||||| Sbjct: 36396 atcgcatctccaatcgc 36380
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 391 bits (197), Expect = e-105 Identities = 377/437 (86%) Strand = Plus / Minus Query: 214 gcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcg 273 |||||||||||||| ||||||||||| ||||| || ||||| || || ||||| ||||| Sbjct: 3469534 gcctccttcagggcttcgctcactgttggatgcgcatggcatgtccgtgcaatatcctca 3469475 Query: 274 ctggatgctccatactgaagggcaagcacagcctcgtggatgatctcgcccgcaccaggg 333 || ||||||||||||||||| |||||||| ||||| ||||| ||||| || ||| |||| Sbjct: 3469474 ctagatgctccatactgaagtgcaagcaccgcctcatggattatctcacctgcattaggg 3469415 Query: 334 gacattatgtgtacaccgaggattctgtcagtttccttctcagatatcaccttcaccatc 393 | |||||| ||||||||||||||||| || || |||||||||| | ||||| |||| | Sbjct: 3469414 gccattatatgtacaccgaggattctatcggtctccttctcagccactaccttgaccaac 3469355 Query: 394 ccttcggcatcatcgattgccttcgcccgactgtttgccagcagggggaacttgccaacc 453 ||||| |||||||| |||||||| || || ||||| |||| |||||||||||| |||||| Sbjct: 3469354 ccttcagcatcatcaattgcctttgcacggctgttggccaacagggggaacttcccaacc 3469295 Query: 454 tggtaggctacaccagatgccttgacctgttcctctgtcttgccaacggaggccacctct 513 |||||||| || || ||||||||||||||||| || ||||| ||||| || ||||||||| Sbjct: 3469294 tggtaggccactcctgatgccttgacctgttcttccgtcttcccaacagaagccacctct 3469235 Query: 514 gggtgtgtgtacaccaccccaggtacagtgtcatagtcaacatggccctccttccctgca 573 ||||||||||||||||| ||||||||||||||||| || || || || || || ||||| Sbjct: 3469234 gggtgtgtgtacaccactccaggtacagtgtcataatctacgtgaccttctttacctgcg 3469175 Query: 574 ataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggtccaggg 633 || ||||||||||| ||||||||||| || ||||| |||||||||||||| ||||||||| Sbjct: 3469174 atgaattcaacacaggcaacaccatcttcttcagctttatgtgcaagcatgggtccaggg 3469115 Query: 634 atcgcatctccaatcgc 650 ||||||||||||||||| Sbjct: 3469114 atcgcatctccaatcgc 3469098
>gb|AY108596.1| Zea mays PCO067598 mRNA sequence Length = 1994 Score = 168 bits (85), Expect = 1e-38 Identities = 381/477 (79%), Gaps = 2/477 (0%) Strand = Plus / Minus Query: 172 agaaatcacatgtggatcgccttgtcgtaggtgttcatgcacgcctccttcagggcctcg 231 |||||| | |||||||| || || ||| |||| | || ||| |||||||| ||||||||| Sbjct: 1626 agaaattatatgtggattgctttatcgaaggtttgcaagcaagcctccttgagggcctcg 1567 Query: 232 ctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcgctggatgctccatactga 291 ||||| || || ||||||||||| || || |||| ||||| ||||||||||||||||| Sbjct: 1566 ctcacggtagggtgtgcgtggcatgttcgagcaacatcctcactggatgctccatactgc 1507 Query: 292 agggcaagcacagcctcgtggatgatctcgcccgcaccaggggacattatgtgtacaccg 351 | ||| | ||||| |||||||||||||| || ||| ||| | ||| ||||| || || Sbjct: 1506 aaggcgacgacagcttcgtggatgatctcaccagcattaggtgccataatgtgcacgccc 1447 Query: 352 aggattctgtcagtttccttctcagatatcaccttcaccatcccttcggcatcatcgatt 411 || || | || ||||||||||| | |||||||| || | |||||| || ||||| || Sbjct: 1446 agaatcttatctgtttccttctctgcgatcaccttaactaccccttcagcgtcatcaatg 1387 Query: 412 gccttcgcccgactgtttgccagcagggggaacttgccaacctggtaggctacacc-aga 470 |||||||| |||||||| |||| || || ||||| || || | ||||| | || ||| Sbjct: 1386 gccttcgcacgactgttagccaaaagtggaaacttccccacacgataggcaattcctaga 1327 Query: 471 tgccttgacctgttcctctgtcttgccaacggaggccacctctgggtgtgtgtacaccac 530 ||||| ||||| ||||| ||||||||||| || || || ||||| || || || ||||| Sbjct: 1326 -gccttcacctgctcctcagtcttgccaacagatgcaacttctggatgcgtataaaccac 1268 Query: 531 cccaggtacagtgtcatagtcaacatggccctccttccctgcaataaattcaacacatgc 590 ||||| || |||||||||||||||||||| ||||| || ||||| || || || || || Sbjct: 1267 accaggaactgtgtcatagtcaacatggccttcctttccagcaatgaactctacgcaagc 1208 Query: 591 aacaccatcctcctcagccttatgtgcaagcatcggtccagggatcgcatctccaat 647 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| Sbjct: 1207 gacaccatcctcttcagctttatgggcaagcatgggaccagggatcgcatccccaat 1151
>ref|NM_183836.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1512 Score = 163 bits (82), Expect = 9e-37 Identities = 346/434 (79%) Strand = Plus / Minus Query: 214 gcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcg 273 |||||||||| ||| |||||||| || ||||| |||||||| || || || |||||||| Sbjct: 1475 gcctccttcaaggcttcgctcacggtgggatgagcgtggcatgtacgagctatgtcctca 1416 Query: 274 ctggatgctccatactgaagggcaagcacagcctcgtggatgatctcgcccgcaccaggg 333 || |||||||||||||| | ||||| |||||||| || || ||||| || ||||| || Sbjct: 1415 cttgatgctccatactgcaaagcaaggacagcctcatgtattatctctccagcaccggga 1356 Query: 334 gacattatgtgtacaccgaggattctgtcagtttccttctcagatatcaccttcaccatc 393 | ||| || || || || || || |||||||||||||||||| | ||||||||||| Sbjct: 1355 gccatgatatgcacgcccagaatcttgtcagtttccttctcagccaccaccttcaccaag 1296 Query: 394 ccttcggcatcatcgattgccttcgcccgactgtttgccagcagggggaacttgccaacc 453 || || ||||| || || ||||| || || |||||||||| ||| || || |||||||| Sbjct: 1295 ccctcagcatcgtcaatggcctttgcacggctgtttgccaacagcggaaatttgccaaca 1236 Query: 454 tggtaggctacaccagatgccttgacctgttcctctgtcttgccaacggaggccacctct 513 |||||| | || | || || ||||| || || ||||| ||||| || || |||||| Sbjct: 1235 cggtagggaattcctaaagctttcacctgctcttcagtctttccaacagacgcgacctct 1176 Query: 514 gggtgtgtgtacaccaccccaggtacagtgtcatagtcaacatggccctccttccctgca 573 || ||||| || ||||| ||||| || ||||||||||| || || |||||||| || ||| Sbjct: 1175 ggatgtgtatagaccacaccaggcactgtgtcatagtcgacgtgcccctccttgccagca 1116 Query: 574 ataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggtccaggg 633 || || |||||||| |||||||||||||| ||||| || || |||||||| || |||||| Sbjct: 1115 atgaactcaacacaggcaacaccatcctcttcagctttgtgggcaagcatgggcccaggg 1056 Query: 634 atcgcatctccaat 647 || ||||| ||||| Sbjct: 1055 atggcatccccaat 1042
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 163 bits (82), Expect = 9e-37 Identities = 346/434 (79%) Strand = Plus / Plus Query: 214 gcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcg 273 |||||||||| ||| |||||||| || ||||| |||||||| || || || |||||||| Sbjct: 12638115 gcctccttcaaggcttcgctcacggtgggatgagcgtggcatgtacgagctatgtcctca 12638174 Query: 274 ctggatgctccatactgaagggcaagcacagcctcgtggatgatctcgcccgcaccaggg 333 || |||||||||||||| | ||||| |||||||| || || ||||| || ||||| || Sbjct: 12638175 cttgatgctccatactgcaaagcaaggacagcctcatgtattatctctccagcaccggga 12638234 Query: 334 gacattatgtgtacaccgaggattctgtcagtttccttctcagatatcaccttcaccatc 393 | ||| || || || || || || |||||||||||||||||| | ||||||||||| Sbjct: 12638235 gccatgatatgcacgcccagaatcttgtcagtttccttctcagccaccaccttcaccaag 12638294 Query: 394 ccttcggcatcatcgattgccttcgcccgactgtttgccagcagggggaacttgccaacc 453 || || ||||| || || ||||| || || |||||||||| ||| || || |||||||| Sbjct: 12638295 ccctcagcatcgtcaatggcctttgcacggctgtttgccaacagcggaaatttgccaaca 12638354 Query: 454 tggtaggctacaccagatgccttgacctgttcctctgtcttgccaacggaggccacctct 513 |||||| | || | || || ||||| || || ||||| ||||| || || |||||| Sbjct: 12638355 cggtagggaattcctaaagctttcacctgctcttcagtctttccaacagacgcgacctct 12638414 Query: 514 gggtgtgtgtacaccaccccaggtacagtgtcatagtcaacatggccctccttccctgca 573 || ||||| || ||||| ||||| || ||||||||||| || || |||||||| || ||| Sbjct: 12638415 ggatgtgtatagaccacaccaggcactgtgtcatagtcgacgtgcccctccttgccagca 12638474 Query: 574 ataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggtccaggg 633 || || |||||||| |||||||||||||| ||||| || || |||||||| || |||||| Sbjct: 12638475 atgaactcaacacaggcaacaccatcctcttcagctttgtgggcaagcatgggcccaggg 12638534 Query: 634 atcgcatctccaat 647 || ||||| ||||| Sbjct: 12638535 atggcatccccaat 12638548
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 163 bits (82), Expect = 9e-37 Identities = 346/434 (79%) Strand = Plus / Plus Query: 214 gcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcg 273 |||||||||| ||| |||||||| || ||||| |||||||| || || || |||||||| Sbjct: 149725 gcctccttcaaggcttcgctcacggtgggatgagcgtggcatgtacgagctatgtcctca 149784 Query: 274 ctggatgctccatactgaagggcaagcacagcctcgtggatgatctcgcccgcaccaggg 333 || |||||||||||||| | ||||| |||||||| || || ||||| || ||||| || Sbjct: 149785 cttgatgctccatactgcaaagcaaggacagcctcatgtattatctctccagcaccggga 149844 Query: 334 gacattatgtgtacaccgaggattctgtcagtttccttctcagatatcaccttcaccatc 393 | ||| || || || || || || |||||||||||||||||| | ||||||||||| Sbjct: 149845 gccatgatatgcacgcccagaatcttgtcagtttccttctcagccaccaccttcaccaag 149904 Query: 394 ccttcggcatcatcgattgccttcgcccgactgtttgccagcagggggaacttgccaacc 453 || || ||||| || || ||||| || || |||||||||| ||| || || |||||||| Sbjct: 149905 ccctcagcatcgtcaatggcctttgcacggctgtttgccaacagcggaaatttgccaaca 149964 Query: 454 tggtaggctacaccagatgccttgacctgttcctctgtcttgccaacggaggccacctct 513 |||||| | || | || || ||||| || || ||||| ||||| || || |||||| Sbjct: 149965 cggtagggaattcctaaagctttcacctgctcttcagtctttccaacagacgcgacctct 150024 Query: 514 gggtgtgtgtacaccaccccaggtacagtgtcatagtcaacatggccctccttccctgca 573 || ||||| || ||||| ||||| || ||||||||||| || || |||||||| || ||| Sbjct: 150025 ggatgtgtatagaccacaccaggcactgtgtcatagtcgacgtgcccctccttgccagca 150084 Query: 574 ataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggtccaggg 633 || || |||||||| |||||||||||||| ||||| || || |||||||| || |||||| Sbjct: 150085 atgaactcaacacaggcaacaccatcctcttcagctttgtgggcaagcatgggcccaggg 150144 Query: 634 atcgcatctccaat 647 || ||||| ||||| Sbjct: 150145 atggcatccccaat 150158
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 163 bits (82), Expect = 9e-37 Identities = 346/434 (79%) Strand = Plus / Plus Query: 214 gcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcg 273 |||||||||| ||| |||||||| || ||||| |||||||| || || || |||||||| Sbjct: 5144 gcctccttcaaggcttcgctcacggtgggatgagcgtggcatgtacgagctatgtcctca 5203 Query: 274 ctggatgctccatactgaagggcaagcacagcctcgtggatgatctcgcccgcaccaggg 333 || |||||||||||||| | ||||| |||||||| || || ||||| || ||||| || Sbjct: 5204 cttgatgctccatactgcaaagcaaggacagcctcatgtattatctctccagcaccggga 5263 Query: 334 gacattatgtgtacaccgaggattctgtcagtttccttctcagatatcaccttcaccatc 393 | ||| || || || || || || |||||||||||||||||| | ||||||||||| Sbjct: 5264 gccatgatatgcacgcccagaatcttgtcagtttccttctcagccaccaccttcaccaag 5323 Query: 394 ccttcggcatcatcgattgccttcgcccgactgtttgccagcagggggaacttgccaacc 453 || || ||||| || || ||||| || || |||||||||| ||| || || |||||||| Sbjct: 5324 ccctcagcatcgtcaatggcctttgcacggctgtttgccaacagcggaaatttgccaaca 5383 Query: 454 tggtaggctacaccagatgccttgacctgttcctctgtcttgccaacggaggccacctct 513 |||||| | || | || || ||||| || || ||||| ||||| || || |||||| Sbjct: 5384 cggtagggaattcctaaagctttcacctgctcttcagtctttccaacagacgcgacctct 5443 Query: 514 gggtgtgtgtacaccaccccaggtacagtgtcatagtcaacatggccctccttccctgca 573 || ||||| || ||||| ||||| || ||||||||||| || || |||||||| || ||| Sbjct: 5444 ggatgtgtatagaccacaccaggcactgtgtcatagtcgacgtgcccctccttgccagca 5503 Query: 574 ataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggtccaggg 633 || || |||||||| |||||||||||||| ||||| || || |||||||| || |||||| Sbjct: 5504 atgaactcaacacaggcaacaccatcctcttcagctttgtgggcaagcatgggcccaggg 5563 Query: 634 atcgcatctccaat 647 || ||||| ||||| Sbjct: 5564 atggcatccccaat 5577
>dbj|AK066632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072D16, full insert sequence Length = 1779 Score = 163 bits (82), Expect = 9e-37 Identities = 346/434 (79%) Strand = Plus / Minus Query: 214 gcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcg 273 |||||||||| ||| |||||||| || ||||| |||||||| || || || |||||||| Sbjct: 1558 gcctccttcaaggcttcgctcacggtgggatgagcgtggcatgtacgagctatgtcctca 1499 Query: 274 ctggatgctccatactgaagggcaagcacagcctcgtggatgatctcgcccgcaccaggg 333 || |||||||||||||| | ||||| |||||||| || || ||||| || ||||| || Sbjct: 1498 cttgatgctccatactgcaaagcaaggacagcctcatgtattatctctccagcaccggga 1439 Query: 334 gacattatgtgtacaccgaggattctgtcagtttccttctcagatatcaccttcaccatc 393 | ||| || || || || || || |||||||||||||||||| | ||||||||||| Sbjct: 1438 gccatgatatgcacgcccagaatcttgtcagtttccttctcagccaccaccttcaccaag 1379 Query: 394 ccttcggcatcatcgattgccttcgcccgactgtttgccagcagggggaacttgccaacc 453 || || ||||| || || ||||| || || |||||||||| ||| || || |||||||| Sbjct: 1378 ccctcagcatcgtcaatggcctttgcacggctgtttgccaacagcggaaatttgccaaca 1319 Query: 454 tggtaggctacaccagatgccttgacctgttcctctgtcttgccaacggaggccacctct 513 |||||| | || | || || ||||| || || ||||| ||||| || || |||||| Sbjct: 1318 cggtagggaattcctaaagctttcacctgctcttcagtctttccaacagacgcgacctct 1259 Query: 514 gggtgtgtgtacaccaccccaggtacagtgtcatagtcaacatggccctccttccctgca 573 || ||||| || ||||| ||||| || ||||||||||| || || |||||||| || ||| Sbjct: 1258 ggatgtgtatagaccacaccaggcactgtgtcatagtcgacgtgcccctccttgccagca 1199 Query: 574 ataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggtccaggg 633 || || |||||||| |||||||||||||| ||||| || || |||||||| || |||||| Sbjct: 1198 atgaactcaacacaggcaacaccatcctcttcagctttgtgggcaagcatgggcccaggg 1139 Query: 634 atcgcatctccaat 647 || ||||| ||||| Sbjct: 1138 atggcatccccaat 1125
>gb|AF290464.1|AF290464 Lolium perenne clone Lp913 unknown sequence Length = 496 Score = 161 bits (81), Expect = 4e-36 Identities = 256/313 (81%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 336 cattatgtgtacaccgaggattctgtcagtttccttctcagatatcaccttcaccatccc 395 ||||||||| ||||| || || |||||||||| || |||| | ||||| |||| ||| Sbjct: 43 cattatgtgcacaccaagaatcttgtcagtttctttatcagccacgaccttaaccaaccc 102 Query: 396 ttcggcatcatcgattgccttcgcccga-ctgtttgccagcagggggaacttgccaacct 454 || |||||||| || ||||| || || |||||||||| ||||||||| ||||||||| Sbjct: 103 ctcagcatcatcaatagcctttgcacgggctgtttgccaacagggggaatttgccaaccc 162 Query: 455 ggtaggctacaccagatgccttgacctgttcctctgtcttgccaacggaggccacctctg 514 ||||||| | || || ||||| ||||| ||||||||||| ||||| || || ||||||| Sbjct: 163 ggtaggcaattcctgaggccttcacctgctcctctgtcttcccaacagatgcaacctctg 222 Query: 515 ggtgtgtgtacaccaccccaggtacagtgtcatagtcaacatggccctccttccctgcaa 574 |||||||||||||||| ||||| || ||||||||||| ||||| ||||| || |||| Sbjct: 223 ggtgtgtgtacaccacaccaggcactaaatcatagtcaacgtggccttccttgccagcaa 282 Query: 575 taaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggtccaggga 634 || ||||||||||| ||||||||||| ||||| || || |||||||| || ||||||| Sbjct: 283 ggaactcaacacatgccacaccatcctcttcagctttgtgggcaagcatgggcccaggga 342 Query: 635 tcgcatctccaat 647 | ||||| ||||| Sbjct: 343 tggcatcaccaat 355
>emb|AJ234643.1|HVU234643 Hordeum vulgare genomic DNA fragment; clone MWG0913 Length = 521 Score = 161 bits (81), Expect = 4e-36 Identities = 287/357 (80%) Strand = Plus / Minus Query: 294 ggcaagcacagcctcgtggatgatctcgcccgcaccaggggacattatgtgtacaccgag 353 |||||||||||| || ||||||||||| || ||| | | ||||||||| ||||| || Sbjct: 521 ggcaagcacagcttcatggatgatctctccagcattctgcgccattatgtgcacaccaag 462 Query: 354 gattctgtcagtttccttctcagatatcaccttcaccatcccttcggcatcatcgattgc 413 || ||||||||||||| |||| | ||||| |||||||| |||||||||||||| || Sbjct: 461 aatcttgtcagtttccttgtcagccacgaccttaaccatcccctcggcatcatcgatagc 402 Query: 414 cttcgcccgactgtttgccagcagggggaacttgccaacctggtaggctacaccagatgc 473 ||| || || ||||| |||| || ||||| |||||||| |||||| | || || || Sbjct: 401 cttggcacggctgttcgccatgagcgggaatttgccaacbcggtagggaattcctgaggc 342 Query: 474 cttgacctgttcctctgtcttgccaacggaggccacctctgggtgtgtgtacaccacccc 533 ||| ||||| ||||| |||||||||||||| ||||||||||||||||||| ||||| || Sbjct: 341 cttcacctgctcctccgtcttgccaacggatsccacctctgggtgtgtgtagaccacacc 282 Query: 534 aggtacagtgtcatagtcaacatggccctccttccctgcaataaattcaacacatgcaac 593 ||| || || ||||| || || || ||||| || || | || ||||||||||| || Sbjct: 281 aggcaccaaatcgtagtcgacgtgaccttccttgccagcgaggaactcaacacatgccac 222 Query: 594 accatcctcctcagccttatgtgcaagcatcggtccagggatcgcatctccaatcgc 650 ||||||||| |||||||| || |||||||| || |||||||| ||||| |||||||| Sbjct: 221 accatcctcttcagccttgtgggcaagcatgggcccagggatggcatcaccaatcgc 165
>dbj|AK063865.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-E03, full insert sequence Length = 492 Score = 141 bits (71), Expect = 3e-30 Identities = 140/163 (85%) Strand = Plus / Minus Query: 214 gcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcg 273 |||||||||||||| ||||||||||| ||||| || ||||| || || ||||| ||||| Sbjct: 183 gcctccttcagggcttcgctcactgttggatgcgcatggcatgtccgtgcaatatcctca 124 Query: 274 ctggatgctccatactgaagggcaagcacagcctcgtggatgatctcgcccgcaccaggg 333 || ||||||||||||||||| |||||||| ||||| ||||| ||||| || ||| |||| Sbjct: 123 ctagatgctccatactgaagtgcaagcaccgcctcatggattatctcacctgcattaggg 64 Query: 334 gacattatgtgtacaccgaggattctgtcagtttccttctcag 376 | |||||| ||||||||||||||||| || || |||||||||| Sbjct: 63 gccattatatgtacaccgaggattctatcggtctccttctcag 21
>gb|BT018819.1| Zea mays clone EL01N0532A10.d mRNA sequence Length = 1889 Score = 115 bits (58), Expect = 2e-22 Identities = 142/170 (83%) Strand = Plus / Minus Query: 478 acctgttcctctgtcttgccaacggaggccacctctgggtgtgtgtacaccaccccaggt 537 ||||| ||||| ||||||||||| || || || ||||| || || || ||||| ||||| Sbjct: 1314 acctgctcctcagtcttgccaacagatgcaacttctggatgcgtataaaccacaccagga 1255 Query: 538 acagtgtcatagtcaacatggccctccttccctgcaataaattcaacacatgcaacacca 597 || |||||||||||||||||||| ||||| || ||||| || || || || || |||||| Sbjct: 1254 actgtgtcatagtcaacatggccttcctttccagcaatgaactctacgcaagcgacacca 1195 Query: 598 tcctcctcagccttatgtgcaagcatcggtccagggatcgcatctccaat 647 ||||| ||||| ||||| |||||||| || |||||||||||||| ||||| Sbjct: 1194 tcctcttcagctttatgggcaagcatgggaccagggatcgcatccccaat 1145 Score = 95.6 bits (48), Expect = 2e-16 Identities = 177/220 (80%) Strand = Plus / Minus Query: 214 gcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcg 273 |||||||| |||||||||||||| || || ||||||||||| || || |||| ||||| Sbjct: 1578 gcctccttgagggcctcgctcacggtagggtgtgcgtggcatgttcgagcaacatcctca 1519 Query: 274 ctggatgctccatactgaagggcaagcacagcctcgtggatgatctcgcccgcaccaggg 333 ||||||||||||||||| | ||| | ||||| || |||||||| || || ||| || Sbjct: 1518 ctggatgctccatactgcaaggcgatgacagcttcatggatgatttcaccagcattgggt 1459 Query: 334 gacattatgtgtacaccgaggattctgtcagtttccttctcagatatcaccttcaccatc 393 | ||||||||| ||||| || || | || ||||||||||| | |||||||| || | | Sbjct: 1458 gccattatgtgcacacctagaatcttatcggtttccttctccgcgatcaccttaactacc 1399 Query: 394 ccttcggcatcatcgattgccttcgcccgactgtttgcca 433 ||||| |||||||| || |||||||| |||||||| |||| Sbjct: 1398 ccttcagcatcatcaatggccttcgcacgactgttagcca 1359
>ref|XM_469141.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1311 Score = 91.7 bits (46), Expect = 3e-15 Identities = 133/162 (82%) Strand = Plus / Minus Query: 369 cttctcagatatcaccttcaccatcccttcggcatcatcgattgccttcgcccgactgtt 428 |||||||| || ||||| |||| | |||| |||||||| || ||||||| | |||| Sbjct: 1213 cttctcagccatgaccttgaccagctcttcagcatcatcaatcgccttcgaacacctgtg 1154 Query: 429 tgccagcagggggaacttgccaacctggtaggctacaccagatgccttgacctgttcctc 488 ||| | ||||| | |||| |||||||||||||| || || |||||||| |||||||| || Sbjct: 1153 tgctaacagggaggacttcccaacctggtaggccactcctgatgccttcacctgttcttc 1094 Query: 489 tgtcttgccaacggaggccacctctgggtgtgtgtacaccac 530 | ||||||||| ||||||||||||| |||||| |||||||| Sbjct: 1093 tatcttgccaaaggaggccacctcttggtgtgcatacaccac 1052
>ref|XM_507069.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0034D21.23 mRNA Length = 4864 Score = 91.7 bits (46), Expect = 3e-15 Identities = 133/162 (82%) Strand = Plus / Minus Query: 369 cttctcagatatcaccttcaccatcccttcggcatcatcgattgccttcgcccgactgtt 428 |||||||| || ||||| |||| | |||| |||||||| || ||||||| | |||| Sbjct: 4711 cttctcagccatgaccttgaccagctcttcagcatcatcaatcgccttcgaacacctgtg 4652 Query: 429 tgccagcagggggaacttgccaacctggtaggctacaccagatgccttgacctgttcctc 488 ||| | ||||| | |||| |||||||||||||| || || |||||||| |||||||| || Sbjct: 4651 tgctaacagggaggacttcccaacctggtaggccactcctgatgccttcacctgttcttc 4592 Query: 489 tgtcttgccaacggaggccacctctgggtgtgtgtacaccac 530 | ||||||||| ||||||||||||| |||||| |||||||| Sbjct: 4591 tatcttgccaaaggaggccacctcttggtgtgcatacaccac 4550
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 91.7 bits (46), Expect = 3e-15 Identities = 133/162 (82%) Strand = Plus / Minus Query: 369 cttctcagatatcaccttcaccatcccttcggcatcatcgattgccttcgcccgactgtt 428 |||||||| || ||||| |||| | |||| |||||||| || ||||||| | |||| Sbjct: 25718035 cttctcagccatgaccttgaccagctcttcagcatcatcaatcgccttcgaacacctgtg 25717976 Query: 429 tgccagcagggggaacttgccaacctggtaggctacaccagatgccttgacctgttcctc 488 ||| | ||||| | |||| |||||||||||||| || || |||||||| |||||||| || Sbjct: 25717975 tgctaacagggaggacttcccaacctggtaggccactcctgatgccttcacctgttcttc 25717916 Query: 489 tgtcttgccaacggaggccacctctgggtgtgtgtacaccac 530 | ||||||||| ||||||||||||| |||||| |||||||| Sbjct: 25717915 tatcttgccaaaggaggccacctcttggtgtgcatacaccac 25717874
>gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genomic sequence, complete sequence Length = 190834 Score = 91.7 bits (46), Expect = 3e-15 Identities = 133/162 (82%) Strand = Plus / Plus Query: 369 cttctcagatatcaccttcaccatcccttcggcatcatcgattgccttcgcccgactgtt 428 |||||||| || ||||| |||| | |||| |||||||| || ||||||| | |||| Sbjct: 126861 cttctcagccatgaccttgaccagctcttcagcatcatcaatcgccttcgaacacctgtg 126920 Query: 429 tgccagcagggggaacttgccaacctggtaggctacaccagatgccttgacctgttcctc 488 ||| | ||||| | |||| |||||||||||||| || || |||||||| |||||||| || Sbjct: 126921 tgctaacagggaggacttcccaacctggtaggccactcctgatgccttcacctgttcttc 126980 Query: 489 tgtcttgccaacggaggccacctctgggtgtgtgtacaccac 530 | ||||||||| ||||||||||||| |||||| |||||||| Sbjct: 126981 tatcttgccaaaggaggccacctcttggtgtgcatacaccac 127022
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 91.7 bits (46), Expect = 3e-15 Identities = 133/162 (82%) Strand = Plus / Minus Query: 369 cttctcagatatcaccttcaccatcccttcggcatcatcgattgccttcgcccgactgtt 428 |||||||| || ||||| |||| | |||| |||||||| || ||||||| | |||| Sbjct: 25809344 cttctcagccatgaccttgaccagctcttcagcatcatcaatcgccttcgaacacctgtg 25809285 Query: 429 tgccagcagggggaacttgccaacctggtaggctacaccagatgccttgacctgttcctc 488 ||| | ||||| | |||| |||||||||||||| || || |||||||| |||||||| || Sbjct: 25809284 tgctaacagggaggacttcccaacctggtaggccactcctgatgccttcacctgttcttc 25809225 Query: 489 tgtcttgccaacggaggccacctctgggtgtgtgtacaccac 530 | ||||||||| ||||||||||||| |||||| |||||||| Sbjct: 25809224 tatcttgccaaaggaggccacctcttggtgtgcatacaccac 25809183
>dbj|AK102561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097I22, full insert sequence Length = 4865 Score = 91.7 bits (46), Expect = 3e-15 Identities = 133/162 (82%) Strand = Plus / Minus Query: 369 cttctcagatatcaccttcaccatcccttcggcatcatcgattgccttcgcccgactgtt 428 |||||||| || ||||| |||| | |||| |||||||| || ||||||| | |||| Sbjct: 4712 cttctcagccatgaccttgaccagctcttcagcatcatcaatcgccttcgaacacctgtg 4653 Query: 429 tgccagcagggggaacttgccaacctggtaggctacaccagatgccttgacctgttcctc 488 ||| | ||||| | |||| |||||||||||||| || || |||||||| |||||||| || Sbjct: 4652 tgctaacagggaggacttcccaacctggtaggccactcctgatgccttcacctgttcttc 4593 Query: 489 tgtcttgccaacggaggccacctctgggtgtgtgtacaccac 530 | ||||||||| ||||||||||||| |||||| |||||||| Sbjct: 4592 tatcttgccaaaggaggccacctcttggtgtgcatacaccac 4551
>gb|AF542182.1| Lycopersicon esculentum dihydrolipoamide dehydrogenase precursor, mRNA, complete cds; nuclear gene for mitochondrial product Length = 1782 Score = 87.7 bits (44), Expect = 4e-14 Identities = 125/152 (82%) Strand = Plus / Minus Query: 472 gccttgacctgttcctctgtcttgccaacggaggccacctctgggtgtgtgtacaccacc 531 ||||| |||||||| || || || |||||||| |||||||||||||| ||||| || Sbjct: 1228 gccttaacctgttcttcagttttcccaacggaagccacctctgggtgagtgtagcaaaca 1169 Query: 532 ccaggtacagtgtcatagtcaacatggccctccttccctgcaataaattcaacacatgca 591 ||||| || || ||||| ||||| || ||||| |||||||||||||| ||||| ||| Sbjct: 1168 ccaggaaccaaatcgtagtccacatgaccttccttgcctgcaataaattccacacaagca 1109 Query: 592 acaccatcctcctcagccttatgtgcaagcat 623 |||||||||||||| ||||| || |||||||| Sbjct: 1108 acaccatcctcctctgccttgtgagcaagcat 1077 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 220 ttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcgctggat 279 ||||| |||||||||| ||| |||||||||||||| || || |||||||| || || ||| Sbjct: 1480 ttcagagcctcgctcattgtaggatgtgcgtggcatgtacgagcaatgtcttcactcgat 1421 Query: 280 gctccata 287 |||||||| Sbjct: 1420 gctccata 1413
>gb|AF295339.1|AF295339 Solanum tuberosum dihydrolipoamide dehydrogenase precursor (lpd2) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1515 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Minus Query: 478 acctgttcctctgtcttgccaacggaggccacctctgggtgtgtgtacaccaccccaggt 537 ||||||||||| || || ||||| | ||||| || ||||| ||||| || || |||||| Sbjct: 1214 acctgttcctcggttttcccaacataagccacttccgggtgggtgtaaacgacaccaggt 1155 Query: 538 acagtgtcatagtcaacatggccctccttccctgcaataaattcaacacatgcaacacca 597 || | |||||||| ||||| |||||||| |||||||| || || ||||| ||||| ||| Sbjct: 1154 accatatcatagtctacatgaccctccttacctgcaatgaactctacacaagcaacgcca 1095 Query: 598 tcctcctcagccttatgtgcaagcatcggtccagg 632 |||||||| ||||| || || ||||| |||||||| Sbjct: 1094 tcctcctctgccttgtgagccagcattggtccagg 1060 Score = 42.1 bits (21), Expect = 2.3 Identities = 54/65 (83%) Strand = Plus / Minus Query: 226 gcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcgctggatgctcca 285 ||||| |||| ||| |||||||| || || || || ||||||||||| || |||||||| Sbjct: 1466 gcctcactcattgttggatgtgcatgacaagtacgagcaatgtcctcacttgatgctccg 1407 Query: 286 tactg 290 ||||| Sbjct: 1406 tactg 1402
>gb|BT013229.1| Lycopersicon esculentum clone 134471R, mRNA sequence Length = 1741 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 478 acctgttcctctgtcttgccaacggaggccacctctgggtgtgtgtacaccaccccaggt 537 ||||||||||| || || ||||| | |||||||| ||||| ||||| || || |||||| Sbjct: 1315 acctgttcctcggttttcccaacataagccacctccgggtgggtgtaaacaacaccaggt 1256 Query: 538 acagtgtcatagtcaacatggccctccttccctgcaataaattcaacacatgcaacacca 597 || | |||||||| ||||| |||||||| |||||||| || || || || ||||| ||| Sbjct: 1255 accatatcatagtctacatgaccctccttgcctgcaatgaactctacgcaagcaacgcca 1196 Query: 598 tcctcctcagccttatgtgcaagcatcggtccagg 632 |||||||| ||||| || || | ||| |||||||| Sbjct: 1195 tcctcctctgccttgtgagccaacattggtccagg 1161
>gb|AY536039.1| Capsicum annuum lipoamide dehydrogenase (LDH) mRNA, complete cds Length = 1823 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 547 tagtcaacatggccctccttccctgcaataaattcaacacatgcaacaccatcctcctca 606 ||||| ||||| ||||| || |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 1186 tagtccacatgaccctctttgcctgcaatgaattccacacaagcaacaccatcctcctct 1127 Query: 607 gcctt 611 ||||| Sbjct: 1126 gcctt 1122 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 220 ttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcgctggat 279 ||||| || ||||||| ||| |||||||||||||| || || ||||||||||| || ||| Sbjct: 1513 ttcagagcttcgctcattgttggatgtgcgtggcatgtacgagcaatgtcctcacttgat 1454 Query: 280 gctccata 287 |||||||| Sbjct: 1453 gctccata 1446
>emb|AJ223804.1|ART223804 Arabidopsis thaliana mRNA for 2-oxoglutarate dehydrogenase E3 subunit Length = 1687 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 568 cctgcaataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggt 627 ||||| ||||| |||||||||||||||||||| || || || || || |||||||| ||| Sbjct: 1030 cctgctataaactcaacacatgcaacaccatcttcttcggctttgtgagcaagcattggt 971 Query: 628 ccagggatcgcatctccaat 647 || || ||| |||||||||| Sbjct: 970 cctggaatcacatctccaat 951
>dbj|AB060811.1| Bruguiera gymnorhiza DLDH mRNA for dihydrolipoamide dehydrogenase precursor, complete cds Length = 2635 Score = 60.0 bits (30), Expect = 1e-05 Identities = 111/138 (80%) Strand = Plus / Minus Query: 474 cttgacctgttcctctgtcttgccaacggaggccacctctgggtgtgtgtacaccacccc 533 ||||||||| |||||||| || ||||| || || |||||||||||||| || || || || Sbjct: 1322 cttgacctgctcctctgttttaccaacagaagcgacctctgggtgtgtatagacaactcc 1263 Query: 534 aggtacagtgtcatagtcaacatggccctccttccctgcaataaattcaacacatgcaac 593 ||| || | |||||||| ||||| || | | || ||||||||||| ||||| ||||| Sbjct: 1262 aggaaccttatcatagtccacatgcccgtgtgtgccagcaataaattccacacaagcaac 1203 Query: 594 accatcctcctcagcctt 611 |||||||| || ||||| Sbjct: 1202 tccatcctcttctgcctt 1185
>ref|XM_954442.1| Neurospora crassa OR74A hypothetical protein (NCU02407.1) partial mRNA Length = 1587 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 247 gcgtggcacgtgcgggcaatgtcctcgctggatgctccatactgaagggcaag 299 |||||||| ||||||||||| ||||||||||| || ||||||| |||||||| Sbjct: 1517 gcgtggcaggtgcgggcaatatcctcgctggaagcgccatactcgagggcaag 1465
>ref|XM_331182.1| Neurospora crassa OR74A hypothetical protein (NCU02407.1) partial mRNA Length = 1587 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 247 gcgtggcacgtgcgggcaatgtcctcgctggatgctccatactgaagggcaag 299 |||||||| ||||||||||| ||||||||||| || ||||||| |||||||| Sbjct: 1517 gcgtggcaggtgcgggcaatatcctcgctggaagcgccatactcgagggcaag 1465
>ref|NM_180674.2| Arabidopsis thaliana LPD2 (LIPOAMIDE DEHYDROGENASE 2); FAD binding / dihydrolipoyl dehydrogenase/ disulfide oxidoreductase/ oxidoreductase AT3G17240 (LPD2) transcript variant AT3G17240.1 mRNA, complete cds Length = 1882 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 568 cctgcaataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggt 627 ||||| ||||| |||||||||||||||||||| || || || || || || ||||| ||| Sbjct: 1216 cctgctataaactcaacacatgcaacaccatcttcttcggctttgtgagccagcattggt 1157 Query: 628 ccagggatcgcatctccaat 647 || || ||| |||||||||| Sbjct: 1156 cctggaatcacatctccaat 1137
>ref|NM_112601.3| Arabidopsis thaliana LPD2 (LIPOAMIDE DEHYDROGENASE 2); FAD binding / dihydrolipoyl dehydrogenase/ disulfide oxidoreductase/ oxidoreductase AT3G17240 (LPD2) transcript variant AT3G17240.3 mRNA, complete cds Length = 1908 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 568 cctgcaataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggt 627 ||||| ||||| |||||||||||||||||||| || || || || || || ||||| ||| Sbjct: 1216 cctgctataaactcaacacatgcaacaccatcttcttcggctttgtgagccagcattggt 1157 Query: 628 ccagggatcgcatctccaat 647 || || ||| |||||||||| Sbjct: 1156 cctggaatcacatctccaat 1137
>gb|AF228640.1|AF228640 Arabidopsis thaliana lipoamide dehydrogenase precursor (lpd2) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1918 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 568 cctgcaataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggt 627 ||||| ||||| |||||||||||||||||||| || || || || || || ||||| ||| Sbjct: 1213 cctgctataaactcaacacatgcaacaccatcttcttcggctttgtgagccagcattggt 1154 Query: 628 ccagggatcgcatctccaat 647 || || ||| |||||||||| Sbjct: 1153 cctggaatcacatctccaat 1134
>emb|BX823441.1|CNS0A6JO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS39ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 826 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 568 cctgcaataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggt 627 ||||| ||||| |||||||||||||||||||| || || || || || || ||||| ||| Sbjct: 156 cctgctataaactcaacacatgcaacaccatcttcttcggctttgtgagccagcattggt 97 Query: 628 ccagggatcgcatctccaat 647 || || ||| |||||||||| Sbjct: 96 cctggaatcacatctccaat 77
>dbj|AB022216.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGD8 Length = 80167 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 568 cctgcaataaattcaacacatgcaacaccatcctcctcagccttatgtgcaagcatcggt 627 ||||| ||||| |||||||||||||||||||| || || || || || || ||||| ||| Sbjct: 11618 cctgctataaactcaacacatgcaacaccatcttcttcggctttgtgagccagcattggt 11677 Query: 628 ccagggatcgcatctccaat 647 || || ||| |||||||||| Sbjct: 11678 cctggaatcacatctccaat 11697
>emb|BX825575.1|CNS0A4WU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL45ZG04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1821 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 568 cctgcaataaattcaacacatgcaacaccat 598 ||||||||||| ||||||||||||||||||| Sbjct: 1172 cctgcaataaactcaacacatgcaacaccat 1142
>emb|CR693877.2|CNS0FYCH Tetraodon nigroviridis full-length cDNA Length = 1448 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 484 tcctctgtcttgccaacggaggccacctctgggtgtgtgta 524 ||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 992 tcctctgtcttgccaacccaggcgacctcggggtgtgtgta 952
>gb|AF181096.1|AF181096 Vigna unguiculata ferric leghemoglobin reductase (flbr) mRNA, complete cds Length = 1750 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 226 gcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcgctggatgctcca 285 |||||||||| ||| |||||||| |||||| || ||||||||||| |||||||| || Sbjct: 1475 gcctcgctcattgttggatgtgcatggcacacacgtgcaatgtcctcactggatgcatca 1416 Query: 286 tactg 290 ||||| Sbjct: 1415 tactg 1411
>ref|XM_807201.1| Trypanosoma cruzi strain CL Brener dihydrolipoyl dehydrogenase (Tc00.1047053511025.110) partial mRNA Length = 1434 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 207 catgcacgcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgg 261 |||||||||||| ||||||||||| || |||||| || |||||||| |||||| Sbjct: 1404 catgcacgcctctttcagggcctctgacattgtcgggtgggcgtggcaggtgcgg 1350
>ref|XM_813699.1| Trypanosoma cruzi strain CL Brener dihydrolipoyl dehydrogenase (Tc00.1047053507089.270) partial mRNA Length = 1434 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 207 catgcacgcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgg 261 |||||||||||| ||||||||||| || |||||| || |||||||| |||||| Sbjct: 1404 catgcacgcctctttcagggcctctgacattgtcgggtgggcgtggcaggtgcgg 1350
>emb|Y11262.1|TCLPDALL2 T.cruzi lpd gene, allele 2 Length = 2280 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 207 catgcacgcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgg 261 |||||||||||| ||||||||||| || |||||| || |||||||| |||||| Sbjct: 1644 catgcacgcctctttcagggcctctgacattgtcgggtgggcgtggcaggtgcgg 1590
>emb|Y11261.1|TCLPDALL1 T.cruzi lpd gene, allele 1 Length = 2280 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 207 catgcacgcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgg 261 |||||||||||| ||||||||||| || |||||| || |||||||| |||||| Sbjct: 1644 catgcacgcctctttcagggcctctgacattgtcgggtgggcgtggcaggtgcgg 1590
>emb|X89112.1|TCLPAMDEH T.cruzi mRNA for dihydrolipoamide dehydrogenase Length = 1832 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 207 catgcacgcctccttcagggcctcgctcactgtcggatgtgcgtggcacgtgcgg 261 |||||||||||| ||||||||||| || |||||| || |||||||| |||||| Sbjct: 1516 catgcacgcctctttcagggcctctgacattgtcgggtgggcgtggcaggtgcgg 1462
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11, DP09G08, DP35C12 of chromosome 5 of Podospora anserina Length = 322194 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 247 gcgtggcacgtgcgggcaatgtcctcgctggatgctccatact 289 |||||||| ||||| ||||| ||||||||||| || ||||||| Sbjct: 135883 gcgtggcaagtgcgcgcaatatcctcgctggaagcaccatact 135841
>ref|XM_824637.1| Trypanosoma brucei TREU927 dihydrolipoyl dehydrogenase (Tb11.01.8470) partial mRNA Length = 1434 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Minus Query: 589 gcaacaccatcctcctcagccttatgtgcaagcatcgg 626 |||||||| || |||||||||||||| || |||||||| Sbjct: 1022 gcaacaccttcatcctcagccttatgggcgagcatcgg 985
>emb|X70646.1|TBBDHD T.brucei brucei dihydrolipoamide dehydrogenase gene Length = 1813 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Minus Query: 589 gcaacaccatcctcctcagccttatgtgcaagcatcgg 626 |||||||| || |||||||||||||| || |||||||| Sbjct: 1398 gcaacaccttcatcctcagccttatgggccagcatcgg 1361
>gb|AC104759.10| Homo sapiens chromosome 15, clone RP11-126F18, complete sequence Length = 173986 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 590 caacaccatcctcctcagcctt 611 |||||||||||||||||||||| Sbjct: 134189 caacaccatcctcctcagcctt 134168
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gcctcgtggatgatctcgcccg 325 |||||||||||||||||||||| Sbjct: 3141738 gcctcgtggatgatctcgcccg 3141759
>gb|AC164619.5| Mus musculus BAC clone RP23-82L19 from chromosome 18, complete sequence Length = 216368 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 gctgaactcacatcagaaatcacat 182 |||||| |||||||||||||||||| Sbjct: 181638 gctgaaatcacatcagaaatcacat 181614
>gb|AC002076.2| Homo sapiens BAC clone GS1-345D13 from 7, complete sequence Length = 149764 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 ttcaaaattatttcaaaaact 135 ||||||||||||||||||||| Sbjct: 70429 ttcaaaattatttcaaaaact 70409
>gb|AC146007.2| Pan troglodytes BAC clone RP43-165B16 from 7, complete sequence Length = 173047 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 ttcaaaattatttcaaaaact 135 ||||||||||||||||||||| Sbjct: 8136 ttcaaaattatttcaaaaact 8116
>emb|CR450706.7| Zebrafish DNA sequence from clone CH211-14K11 in linkage group 25, complete sequence Length = 192643 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 gtgtacaccgaggattctgtc 362 ||||||||||||||||||||| Sbjct: 42928 gtgtacaccgaggattctgtc 42948
>emb|CR376836.6| Zebrafish DNA sequence from clone CH211-190O6 in linkage group 25, complete sequence Length = 132156 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 gtgtacaccgaggattctgtc 362 ||||||||||||||||||||| Sbjct: 117349 gtgtacaccgaggattctgtc 117369
>gb|AC091047.10| Homo sapiens chromosome 8, clone RP11-102F4, complete sequence Length = 165127 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 attcaaaattatttcaaaaac 134 ||||||||||||||||||||| Sbjct: 3703 attcaaaattatttcaaaaac 3683
>emb|AL662902.14| Mouse DNA sequence from clone RP23-417K16 on chromosome 11 Contains two novel genes, complete sequence Length = 154002 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 288 ctgaagggcaagcacagcctcgtgg 312 |||||||||||| |||||||||||| Sbjct: 54062 ctgaagggcaagaacagcctcgtgg 54038
>gb|AC119424.2| Homo sapiens chromosome 3 clone RP11-475O23, complete sequence Length = 208015 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 512 ctgggtgtgtgtacaccaccccagg 536 ||||| ||||||||||||||||||| Sbjct: 85424 ctgggggtgtgtacaccaccccagg 85400
>gb|AC024680.10| Homo sapiens chromosome 8, clone RP11-347D13, complete sequence Length = 81715 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 attcaaaattatttcaaaaac 134 ||||||||||||||||||||| Sbjct: 21170 attcaaaattatttcaaaaac 21150
>gb|AC105751.2| Homo sapiens chromosome 3 clone RP11-908O9, complete sequence Length = 168835 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 512 ctgggtgtgtgtacaccaccccagg 536 ||||| ||||||||||||||||||| Sbjct: 102205 ctgggggtgtgtacaccaccccagg 102229
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 2.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 228 ctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcgctg 276 |||||||| ||||| || |||||||| |||| ||||||||||||||| Sbjct: 2543421 ctcgctcaaagtcgggtgggcgtggcaaatgcgtgcaatgtcctcgctg 2543469
>gb|AF074940.1| Glycine max ferric leghemoglobin reductase-2 precursor mRNA, complete cds Length = 1779 Score = 42.1 bits (21), Expect = 2.3 Identities = 54/65 (83%) Strand = Plus / Minus Query: 226 gcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcgctggatgctcca 285 |||||||||| ||| |||||||| |||||| || ||||||||||| || ||||| || Sbjct: 1462 gcctcgctcattgttggatgtgcatggcacacacgtgcaatgtcctcacttgatgcatca 1403 Query: 286 tactg 290 ||||| Sbjct: 1402 tactg 1398
>emb|AJ620471.1| Euglena gracilis mRNA for dihydrolipoyl dehydrogenase (lpd gene) Length = 1811 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 484 tcctctgtcttgccaacggaggccacctctgggtgtgtgta 524 ||||| |||||||| || |||||||||||||||| ||||| Sbjct: 1118 tcctcagtcttgcccacccaggccacctctgggtgggtgta 1078
>gb|S70187.1| ferric leghemoglobin reductase [Glycine max=soybeans, Merr, nodules, mRNA, 1740 nt] Length = 1740 Score = 42.1 bits (21), Expect = 2.3 Identities = 54/65 (83%) Strand = Plus / Minus Query: 226 gcctcgctcactgtcggatgtgcgtggcacgtgcgggcaatgtcctcgctggatgctcca 285 |||||||||| ||| |||||||| |||||| || ||||||||||| || ||||| || Sbjct: 1475 gcctcgctcattgttggatgtgcatggcacacacgtgcaatgtcctcacttgatgcatca 1416 Query: 286 tactg 290 ||||| Sbjct: 1415 tactg 1411
>gb|AC022522.2|AC022522 Arabidopsis thaliana chromosome I BAC T28K15 genomic sequence, complete sequence Length = 88643 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 ttcaaaattatttcaaaaactcgcc 139 ||||||||||||||||||| ||||| Sbjct: 72405 ttcaaaattatttcaaaaaatcgcc 72429
>gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 sequence, complete sequence Length = 123386 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 ttcaaaattatttcaaaaactcgcc 139 ||||||||||||||||||| ||||| Sbjct: 14505 ttcaaaattatttcaaaaaatcgcc 14529
>gb|AC151406.2| Mus musculus BAC clone RP23-47J5 from 18, complete sequence Length = 230518 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 gctgaactcacatcagaaatcacat 182 |||||| |||||||||||||||||| Sbjct: 35708 gctgaaatcacatcagaaatcacat 35684
>emb|AL928964.7| Zebrafish DNA sequence from clone CH211-127I19, complete sequence Length = 168321 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 attcaaaattatttcaaaaac 134 ||||||||||||||||||||| Sbjct: 73278 attcaaaattatttcaaaaac 73298
>gb|AC161060.6| Mus musculus BAC clone RP23-69N10 from chromosome 6, complete sequence Length = 222363 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 attcaaaattatttcaaaaa 133 |||||||||||||||||||| Sbjct: 131138 attcaaaattatttcaaaaa 131157
>ref|XM_823242.1| Trypanosoma brucei TREU927 UDP-N-acetylglucosamine pyrophosphorylase (Tb11.02.0120) partial mRNA Length = 1638 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 gcatcatcgattgccttcgcccga 423 |||||||||||| ||||||||||| Sbjct: 1025 gcatcatcgatttccttcgcccga 1002
>ref|XM_744252.1| Aspergillus fumigatus Af293 dihydrolipoamide dehydrogenase (Afu2g02100) partial mRNA Length = 1542 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 247 gcgtggcacgtgcgggcaatgtcctcgc 274 |||||||| ||||||||||| ||||||| Sbjct: 1472 gcgtggcatgtgcgggcaatatcctcgc 1445
>ref|XM_391375.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG11199.1) partial mRNA Length = 1290 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 aagggcaagcacagcctcgt 310 |||||||||||||||||||| Sbjct: 1033 aagggcaagcacagcctcgt 1052
>ref|XM_390020.1| Gibberella zeae PH-1 chromosome 4 conserved hypothetical protein (FG09844.1) partial mRNA Length = 1476 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 cgggcaatgtcctcgctgga 278 |||||||||||||||||||| Sbjct: 1394 cgggcaatgtcctcgctgga 1375 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 598 tcctcctcagccttatgtgcaagcatcggtcc 629 |||||||||||||| || |||||||| ||||| Sbjct: 1055 tcctcctcagccttgtgggcaagcataggtcc 1024
>gb|AC128662.4| Mus musculus BAC clone RP24-440E3 from chromosome 6, complete sequence Length = 134729 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 attcaaaattatttcaaaaa 133 |||||||||||||||||||| Sbjct: 34886 attcaaaattatttcaaaaa 34905
>emb|Z36949.1|CEF59E10 Caenorhabditis elegans Cosmid F59E10, complete sequence Length = 8100 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 attcaaaattatttcaaaaa 133 |||||||||||||||||||| Sbjct: 4737 attcaaaattatttcaaaaa 4718
>gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, complete sequence Length = 222905 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 gcaacaaaagaaaaatagatgttt 100 |||| ||||||||||||||||||| Sbjct: 143891 gcaaaaaaagaaaaatagatgttt 143914
>emb|AL731567.6| Human DNA sequence from clone RP11-67C2 on chromosome 10 Contains the ALOX5 gene for arachidonate 5-lipoxygenase, a novel gene, the 3' end of a gene for cellular modulator of immune recognition (c-MIR) and five CpG islands, complete sequence Length = 129266 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gcaacaaaagaaaaatagat 96 |||||||||||||||||||| Sbjct: 58768 gcaacaaaagaaaaatagat 58787
>emb|AL589843.9| Human DNA sequence from clone RP11-535M15 on chromosome 9 Contains a novel gene, a makorin, ring finger protein, 2 (MKRN2) pseudogene, a novel gene (KIAA0972) and five CpG islands, complete sequence Length = 142527 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gcaacaaaagaaaaatagat 96 |||||||||||||||||||| Sbjct: 76734 gcaacaaaagaaaaatagat 76715
>emb|AL391094.12| Human DNA sequence from clone RP5-903E17 on chromosome 1 Contains the 3' end of a novel gene (FLJ10199) and the 5' end of the gene for a novel protein (FLJ25234), complete sequence Length = 45670 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 aaaagaaaaatagatgtttctaga 105 |||| ||||||||||||||||||| Sbjct: 36492 aaaaaaaaaatagatgtttctaga 36469
>emb|AL356100.8| Human DNA sequence from clone RP11-359H22 on chromosome 10 Contains part of a novel gene (KIAA0534), complete sequence Length = 190361 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 attcaaaattatttcaaaaa 133 |||||||||||||||||||| Sbjct: 55905 attcaaaattatttcaaaaa 55924
>emb|AL136090.12| Human DNA sequence from clone RP11-97N19 on chromosome 20 Contains the 5' end of the SLC24A3 gene for solute carrier family 24 (sodium/potassium/calcium exchanger) member 3, a novel gene and a CpG island, complete sequence Length = 185473 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gcaacaaaagaaaaatagat 96 |||||||||||||||||||| Sbjct: 116491 gcaacaaaagaaaaatagat 116472
>emb|AL133348.8| Human DNA sequence from clone RP1-79P11 on chromosome Xq21.32-22.1 Contains the gene for X-linked protein and a CpG island, complete sequence Length = 40584 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 caacaaaagaaaaatagatg 97 |||||||||||||||||||| Sbjct: 2543 caacaaaagaaaaatagatg 2524
>emb|BX028040.1|CNS08TSS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA41DG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 890 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 503 aggccacctctgggtgtgtgtacaccac 530 |||||||||| ||||| ||||||||||| Sbjct: 117 aggccacctccgggtgggtgtacaccac 90
>ref|XM_778480.1| PREDICTED: Strongylocentrotus purpuratus similar to shroom (LOC578304), mRNA Length = 5340 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cagatatcaccttcaccatc 393 |||||||||||||||||||| Sbjct: 3457 cagatatcaccttcaccatc 3476
>gb|AC022795.9| Homo sapiens chromosome 18, clone RP11-254G11, complete sequence Length = 158003 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gcaacaaaagaaaaatagat 96 |||||||||||||||||||| Sbjct: 74130 gcaacaaaagaaaaatagat 74111
>gb|AC097059.2| Homo sapiens chromosome 1 clone RP11-148B18, complete sequence Length = 157081 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 aggaaactagcccgcaacaaaaga 87 |||||||||||| ||||||||||| Sbjct: 73620 aggaaactagccagcaacaaaaga 73597
>gb|AC069431.13| Homo sapiens 3 BAC RP11-225N10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 123742 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 aagagaattaacatatgtggctta 29 |||| ||||||||||||||||||| Sbjct: 31799 aagaaaattaacatatgtggctta 31822
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 accatcctcctcagccttat 613 |||||||||||||||||||| Sbjct: 1071117 accatcctcctcagccttat 1071098
>gb|AC011378.7| Homo sapiens chromosome 5 clone CTB-128B4, complete sequence Length = 112357 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gcaacaaaagaaaaatagat 96 |||||||||||||||||||| Sbjct: 8219 gcaacaaaagaaaaatagat 8200
>gb|AC087636.5| Homo sapiens chromosome 15, clone RP11-469K5, complete sequence Length = 143410 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gcaacaaaagaaaaatagat 96 |||||||||||||||||||| Sbjct: 23605 gcaacaaaagaaaaatagat 23624
>gb|AC113427.2| Homo sapiens chromosome 5 clone RP11-754A4, complete sequence Length = 69248 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gcaacaaaagaaaaatagat 96 |||||||||||||||||||| Sbjct: 31212 gcaacaaaagaaaaatagat 31231
>dbj|AB158486.1| Sus scrofa PPP1R11, ZNRD1, RNF39, GABBR1, MOG, UBD, OLF42-3, OLF42-2, OLF42-1, KRAB genes, complete cds Length = 156044 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gcaacaaaagaaaaatagat 96 |||||||||||||||||||| Sbjct: 19577 gcaacaaaagaaaaatagat 19596
>gb|AC009854.9| Homo sapiens chromosome 18, clone RP11-333A13, complete sequence Length = 207293 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gcaacaaaagaaaaatagat 96 |||||||||||||||||||| Sbjct: 132193 gcaacaaaagaaaaatagat 132174
>gb|AC091729.4| Homo sapiens BAC clone RP13-580H13 from 7, complete sequence Length = 104285 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gcaacaaaagaaaaatagat 96 |||||||||||||||||||| Sbjct: 46250 gcaacaaaagaaaaatagat 46269
>gb|AC024301.10| Homo sapiens, clone RP11-686O16, complete sequence Length = 195269 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gcaacaaaagaaaaatagat 96 |||||||||||||||||||| Sbjct: 130950 gcaacaaaagaaaaatagat 130931
>gb|AC008614.6| Homo sapiens chromosome 5 clone CTB-138E24, complete sequence Length = 125406 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gcaacaaaagaaaaatagat 96 |||||||||||||||||||| Sbjct: 6892 gcaacaaaagaaaaatagat 6911
>gb|AC067801.4|AC067801 Homo sapiens chromosome 18, clone RP11-583B12, complete sequence Length = 174938 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gcaacaaaagaaaaatagat 96 |||||||||||||||||||| Sbjct: 114550 gcaacaaaagaaaaatagat 114531
>gb|AE000785.1| Borrelia burgdorferi B31 plasmid lp25, complete sequence Length = 24177 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 ttcaaaattatttcaaaaac 134 |||||||||||||||||||| Sbjct: 15532 ttcaaaattatttcaaaaac 15513
>ref|XM_320877.2| Anopheles gambiae str. PEST ENSANGP00000019195 (ENSANGG00000016706), partial mRNA Length = 2013 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 503 aggccacctctgggtgtgtgtacaccac 530 |||||||||| ||||| ||||||||||| Sbjct: 1138 aggccacctccgggtgggtgtacaccac 1111
>emb|Z65398.1|HS37A4R H.sapiens CpG island DNA genomic Mse1 fragment, clone 37a4, reverse read cpg37a4.rt1d Length = 144 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 aggaaactagcccgcaacaaaaga 87 |||||||||||| ||||||||||| Sbjct: 68 aggaaactagccagcaacaaaaga 45
>emb|Z65397.1|HS37A4F H.sapiens CpG island DNA genomic Mse1 fragment, clone 37a4, forward read cpg37a4.ft1a Length = 144 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 aggaaactagcccgcaacaaaaga 87 |||||||||||| ||||||||||| Sbjct: 78 aggaaactagccagcaacaaaaga 101
>emb|CT030740.8| Mouse DNA sequence from clone RP24-312D7 on chromosome 17, complete sequence Length = 215154 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 ataaattcaacacatgcaac 593 |||||||||||||||||||| Sbjct: 185590 ataaattcaacacatgcaac 185571
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 438 ggggaacttgccaacctggtaggc 461 ||||||||||||||||| |||||| Sbjct: 6116921 ggggaacttgccaaccttgtaggc 6116898
>emb|AL732498.15| Mouse DNA sequence from clone RP23-323E6 on chromosome 4, complete sequence Length = 145881 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 attcaaaattatttcaaaaa 133 |||||||||||||||||||| Sbjct: 140119 attcaaaattatttcaaaaa 140138
>emb|AL672019.7| Mouse DNA sequence from clone RP23-33P21 on chromosome X, complete sequence Length = 192874 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 588 tgcaacaccatcctcctcagcctt 611 |||| ||||||||||||||||||| Sbjct: 46779 tgcaccaccatcctcctcagcctt 46802
>emb|Z70233.2|HSV870H8 Human DNA sequence from clone GHc-870H8 on chromosome X Contains the BEX1 gene for brain expressed, X-linked 1 protein and a CpG island, complete sequence Length = 36865 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 caacaaaagaaaaatagatg 97 |||||||||||||||||||| Sbjct: 4779 caacaaaagaaaaatagatg 4760 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,190,840 Number of Sequences: 3902068 Number of extensions: 6190840 Number of successful extensions: 127984 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 127539 Number of HSP's gapped (non-prelim): 435 length of query: 655 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 632 effective length of database: 17,143,297,704 effective search space: 10834564148928 effective search space used: 10834564148928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
