ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32i10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ234453.1|HVU234453 Hordeum vulgare partial mRNA; clone cMW... 854 0.0
2gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome... 440 e-120
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 440 e-120
4gb|AC066611.6|AC066611 Homo sapiens chromosome 15 clone RP11-348... 48 0.038
5emb|AL592217.6| Human DNA sequence from clone RP11-621E22 on chr... 42 2.3
6emb|AL162575.15| Human DNA sequence from clone RP11-310K10 on ch... 42 2.3
7gb|AC158920.4| Mus musculus chromosome 5, clone RP24-238C7, comp... 42 2.3
8gb|BC036249.1| Homo sapiens cDNA clone IMAGE:5267015 42 2.3
9gb|AC005632.2| Homo sapiens BAC clone CTB-31N19 from 16, complet... 42 2.3
10dbj|AK052624.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 42 2.3
11ref|NM_100304.3| Arabidopsis thaliana unknown protein AT1G04230 ... 40 9.2
12gb|AC166346.5| Mus musculus BAC clone RP24-83P13 from chromosome... 40 9.2
13gb|AC166832.2| Mus musculus BAC clone RP23-220N17 from chromosom... 40 9.2
14gb|AC166573.2| Mus musculus BAC clone RP23-153H18 from chromosom... 40 9.2
15gb|BC042570.1| Mus musculus protein phosphatase 1F (PP2C domain ... 40 9.2
16gb|AC162281.3| Mus musculus chromosome 1, clone RP24-398O5, comp... 40 9.2
17gb|AC144613.1| Pan troglodytes BAC clone RP43-1F6 from 7, comple... 40 9.2
18gb|BT008818.1| Arabidopsis thaliana At1g04230 mRNA, complete cds 40 9.2
19gb|AC154740.2| Mus musculus BAC clone RP23-118I16 from chromosom... 40 9.2
20gb|AC161426.5| Mus musculus BAC clone RP23-69L13 from chromosome... 40 9.2
21gb|AC093436.2| Drosophila melanogaster 3L BAC RP98-1O14 (Roswell... 40 9.2
22dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 40 9.2
23dbj|AK154192.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 9.2
24dbj|AK164964.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 9.2
25dbj|AK221777.1| Arabidopsis thaliana mRNA for hypothetical prote... 40 9.2
26gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell... 40 9.2
27dbj|AK048669.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 9.2
28dbj|AK041719.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 9.2
29gb|AF370483.1|AF370483 Arabidopsis thaliana Unknown protein mRNA... 40 9.2
30dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
31emb|BX677676.6| Zebrafish DNA sequence from clone DKEYP-12A9 in ... 40 9.2
32emb|BX814191.1|CNS0AC5I Arabidopsis thaliana Full-length cDNA Co... 40 9.2
33gb|AC110768.5| Homo sapiens BAC clone RP11-136I13 from 4, comple... 40 9.2
34gb|AC022078.12|AC022078 Homo sapiens 12p BAC RP11-498P8 (Roswell... 40 9.2
35dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
36gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis tha... 40 9.2
37gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44... 40 9.2
38emb|BX293540.5| Zebrafish DNA sequence from clone DKEY-255N2 in ... 40 9.2
39ref|NM_176833.2| Mus musculus protein phosphatase 1F (PP2C domai... 40 9.2
40emb|CT010502.13| Mouse DNA sequence from clone RP23-27H19 on chr... 40 9.2
41emb|AL844552.4| Mouse DNA sequence from clone RP23-265N10 on chr... 40 9.2 
>emb|AJ234453.1|HVU234453 Hordeum vulgare partial mRNA; clone cMWG0784
          Length = 473

 Score =  854 bits (431), Expect = 0.0
 Identities = 431/431 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcatgctgtttgggattggatcgtttatttacactcttcccaaaagaatcccccataca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42  agcatgctgtttgggattggatcgtttatttacactcttcccaaaagaatcccccataca 101

                                                                       
Query: 61  tgcagacagcagaatcaataaaaagtgctgtttggaattgggatcttttatttaaacatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tgcagacagcagaatcaataaaaagtgctgtttggaattgggatcttttatttaaacatg 161

                                                                       
Query: 121 tcacaaaagaatcatgacttattcatcgtggatacgtgatacatatcgacataagggtga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 tcacaaaagaatcatgacttattcatcgtggatacgtgatacatatcgacataagggtga 221

                                                                       
Query: 181 gattcagctggtctgctattgaacatccagcgattgccaatcgtggaacgacagcccgtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gattcagctggtctgctattgaacatccagcgattgccaatcgtggaacgacagcccgtc 281

                                                                       
Query: 241 gatagtggatggccggaagaggagcgggttaacatcccaccctttcaggcttcctctcga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gatagtggatggccggaagaggagcgggttaacatcccaccctttcaggcttcctctcga 341

                                                                       
Query: 301 ccatctcatactgacattgtcaacctccaggcctgagatgtgctccagcatcataccgcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ccatctcatactgacattgtcaacctccaggcctgagatgtgctccagcatcataccgcc 401

                                                                       
Query: 361 agtcctgtgctttaccatctcctggcacccaggcctgtagtcatacaggcccccagtgta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 agtcctgtgctttaccatctcctggcacccaggcctgtagtcatacaggcccccagtgta 461

                      
Query: 421 atttgtccacc 431
           |||||||||||
Sbjct: 462 atttgtccacc 472
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>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0066E19, complete sequence
          Length = 145575

 Score =  440 bits (222), Expect = e-120
 Identities = 396/454 (87%)
 Strand = Plus / Plus

                                                                         
Query: 207   ccagcgattgccaatcgtggaacgacagcccgtcgatagtggatggccggaagaggagcg 266
             ||||||||||||| || ||||| ||||||  |||||  || |||||| |||||||||| |
Sbjct: 30375 ccagcgattgccagtcatggaatgacagcttgtcgactgtcgatggctggaagaggagag 30434

                                                                         
Query: 267   ggttaacatcccaccctttcaggcttcctctcgaccatctcatactgacattgtcaacct 326
             | | ||||||||| ||||| ||||||||||| ||||||||||| || |||||||| | ||
Sbjct: 30435 gatcaacatcccagcctttgaggcttcctcttgaccatctcatcctcacattgtcgatct 30494

                                                                         
Query: 327   ccaggcctgagatgtgctccagcatcataccgccagtcctgtgctttaccatctcctggc 386
             | ||||| ||||||||||||||||||||||| || || | |||||| |||||||  ||||
Sbjct: 30495 caaggccagagatgtgctccagcatcataccaccggttcggtgcttcaccatcttttggc 30554

                                                                         
Query: 387   acccaggcctgtagtcatacaggcccccagtgtaatttgtccacctcttgtaggtcaggt 446
             | ||||||||||| |||||||| || || | ||| |||||||| ||||||||||| ||||
Sbjct: 30555 atccaggcctgtaatcatacagccctcccgagtagtttgtccatctcttgtaggttaggt 30614

                                                                         
Query: 447   caacattctggaacttcaagttgcgaagcaagccgtgcttcgatccagccaggaaaacac 506
             | ||||||| |||||||| |||||||||||  ||||||||||||||||||| ||| || |
Sbjct: 30615 cgacattcttgaacttcaggttgcgaagcagcccgtgcttcgatccagccaagaatactc 30674

                                                                         
Query: 507   cgttttctgatactgacgagatgttgatgaaacgaacatctgaaatggtgccttctctgg 566
             ||||||||||||| || ||||||||||||||  |||  |||||||||||||||||| |||
Sbjct: 30675 cgttttctgataccgatgagatgttgatgaactgaatgtctgaaatggtgccttctttgg 30734

                                                                         
Query: 567   aatcagggtgccttggacaggtagtgatgtagatcggttcagctctcccccaccatgaag 626
             |||| |||||||||||||| || ||||||||||||||||||||||||||||||||| |||
Sbjct: 30735 aatctgggtgccttggacatgtggtgatgtagatcggttcagctctcccccaccataaag 30794

                                               
Query: 627   gatggtagtacctagtgcgcattttgatgtttga 660
             ||||||||||||| |||| |||||||||||||||
Sbjct: 30795 gatggtagtacctggtgctcattttgatgtttga 30828
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  440 bits (222), Expect = e-120
 Identities = 396/454 (87%)
 Strand = Plus / Plus

                                                                            
Query: 207      ccagcgattgccaatcgtggaacgacagcccgtcgatagtggatggccggaagaggagcg 266
                ||||||||||||| || ||||| ||||||  |||||  || |||||| |||||||||| |
Sbjct: 18632499 ccagcgattgccagtcatggaatgacagcttgtcgactgtcgatggctggaagaggagag 18632558

                                                                            
Query: 267      ggttaacatcccaccctttcaggcttcctctcgaccatctcatactgacattgtcaacct 326
                | | ||||||||| ||||| ||||||||||| ||||||||||| || |||||||| | ||
Sbjct: 18632559 gatcaacatcccagcctttgaggcttcctcttgaccatctcatcctcacattgtcgatct 18632618

                                                                            
Query: 327      ccaggcctgagatgtgctccagcatcataccgccagtcctgtgctttaccatctcctggc 386
                | ||||| ||||||||||||||||||||||| || || | |||||| |||||||  ||||
Sbjct: 18632619 caaggccagagatgtgctccagcatcataccaccggttcggtgcttcaccatcttttggc 18632678

                                                                            
Query: 387      acccaggcctgtagtcatacaggcccccagtgtaatttgtccacctcttgtaggtcaggt 446
                | ||||||||||| |||||||| || || | ||| |||||||| ||||||||||| ||||
Sbjct: 18632679 atccaggcctgtaatcatacagccctcccgagtagtttgtccatctcttgtaggttaggt 18632738

                                                                            
Query: 447      caacattctggaacttcaagttgcgaagcaagccgtgcttcgatccagccaggaaaacac 506
                | ||||||| |||||||| |||||||||||  ||||||||||||||||||| ||| || |
Sbjct: 18632739 cgacattcttgaacttcaggttgcgaagcagcccgtgcttcgatccagccaagaatactc 18632798

                                                                            
Query: 507      cgttttctgatactgacgagatgttgatgaaacgaacatctgaaatggtgccttctctgg 566
                ||||||||||||| || ||||||||||||||  |||  |||||||||||||||||| |||
Sbjct: 18632799 cgttttctgataccgatgagatgttgatgaactgaatgtctgaaatggtgccttctttgg 18632858

                                                                            
Query: 567      aatcagggtgccttggacaggtagtgatgtagatcggttcagctctcccccaccatgaag 626
                |||| |||||||||||||| || ||||||||||||||||||||||||||||||||| |||
Sbjct: 18632859 aatctgggtgccttggacatgtggtgatgtagatcggttcagctctcccccaccataaag 18632918

                                                  
Query: 627      gatggtagtacctagtgcgcattttgatgtttga 660
                ||||||||||||| |||| |||||||||||||||
Sbjct: 18632919 gatggtagtacctggtgctcattttgatgtttga 18632952
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>gb|AC066611.6|AC066611 Homo sapiens chromosome 15 clone RP11-348P16 map 15q21.3, complete
             sequence
          Length = 184355

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 36    tcttcccaaaagaatcccccatac 59
             ||||||||||||||||||||||||
Sbjct: 47156 tcttcccaaaagaatcccccatac 47179
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>emb|AL592217.6| Human DNA sequence from clone RP11-621E22 on chromosome 6, complete
             sequence
          Length = 72060

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 610   tctcccccaccatgaaggatg 630
             |||||||||||||||||||||
Sbjct: 20877 tctcccccaccatgaaggatg 20897
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>emb|AL162575.15| Human DNA sequence from clone RP11-310K10 on chromosome 13 Contains the
             3' end of the PCDH20 gene for protocadherin 20 and a CpG
             island, complete sequence
          Length = 163231

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 60    atgcagacagcagaatcaataaaaa 84
             |||||||||| ||||||||||||||
Sbjct: 67172 atgcagacagaagaatcaataaaaa 67148
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>gb|AC158920.4| Mus musculus chromosome 5, clone RP24-238C7, complete sequence
          Length = 156671

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 114   aaacatgtcacaaaagaatca 134
             |||||||||||||||||||||
Sbjct: 59949 aaacatgtcacaaaagaatca 59929
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>gb|BC036249.1| Homo sapiens cDNA clone IMAGE:5267015
          Length = 1349

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 606  cagctctcccccaccatgaag 626
            |||||||||||||||||||||
Sbjct: 1207 cagctctcccccaccatgaag 1227
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>gb|AC005632.2| Homo sapiens BAC clone CTB-31N19 from 16, complete sequence
          Length = 200594

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 606    cagctctcccccaccatgaag 626
              |||||||||||||||||||||
Sbjct: 154904 cagctctcccccaccatgaag 154884
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>dbj|AK052624.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
            library, clone:D630007A03 product:unclassifiable, full
            insert sequence
          Length = 2892

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 114  aaacatgtcacaaaagaatca 134
            |||||||||||||||||||||
Sbjct: 1897 aaacatgtcacaaaagaatca 1877
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>ref|NM_100304.3| Arabidopsis thaliana unknown protein AT1G04230 mRNA, complete cds
          Length = 1322

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 516 atactgacgagatgttgatg 535
           ||||||||||||||||||||
Sbjct: 805 atactgacgagatgttgatg 786
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>gb|AC166346.5| Mus musculus BAC clone RP24-83P13 from chromosome 16, complete sequence
          Length = 199678

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    ctcttcccaaaagaatcccc 54
             ||||||||||||||||||||
Sbjct: 63022 ctcttcccaaaagaatcccc 63041
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>gb|AC166832.2| Mus musculus BAC clone RP23-220N17 from chromosome 16, complete
             sequence
          Length = 172644

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    ctcttcccaaaagaatcccc 54
             ||||||||||||||||||||
Sbjct: 93759 ctcttcccaaaagaatcccc 93778
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>gb|AC166573.2| Mus musculus BAC clone RP23-153H18 from chromosome 17, complete sequence
          Length = 193004

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     aaaagtgctgtttggaattg 100
              ||||||||||||||||||||
Sbjct: 126451 aaaagtgctgtttggaattg 126432
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>gb|BC042570.1| Mus musculus protein phosphatase 1F (PP2C domain containing), mRNA
            (cDNA clone MGC:25978 IMAGE:4241448), complete cds
          Length = 4783

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   ctcttcccaaaagaatcccc 54
            ||||||||||||||||||||
Sbjct: 3809 ctcttcccaaaagaatcccc 3828
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>gb|AC162281.3| Mus musculus chromosome 1, clone RP24-398O5, complete sequence
          Length = 162097

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 449   acattctggaacttcaagtt 468
             ||||||||||||||||||||
Sbjct: 66787 acattctggaacttcaagtt 66806
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>gb|AC144613.1| Pan troglodytes BAC clone RP43-1F6 from 7, complete sequence
          Length = 177443

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   ttaaacatgtcacaaaagaa 131
             ||||||||||||||||||||
Sbjct: 57518 ttaaacatgtcacaaaagaa 57499
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>gb|BT008818.1| Arabidopsis thaliana At1g04230 mRNA, complete cds
          Length = 978

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 516 atactgacgagatgttgatg 535
           ||||||||||||||||||||
Sbjct: 801 atactgacgagatgttgatg 782
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>gb|AC154740.2| Mus musculus BAC clone RP23-118I16 from chromosome 9, complete sequence
          Length = 222313

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    accctttcaggcttcctctc 298
              ||||||||||||||||||||
Sbjct: 143007 accctttcaggcttcctctc 143026
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>gb|AC161426.5| Mus musculus BAC clone RP23-69L13 from chromosome 10, complete sequence
          Length = 255667

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 647    attttgatgtttgaaaatat 666
              ||||||||||||||||||||
Sbjct: 179544 attttgatgtttgaaaatat 179563
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>gb|AC093436.2| Drosophila melanogaster 3L BAC RP98-1O14 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 163711

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 101  ggatcttttatttaaacatgtcac 124
            |||||||||| |||||||||||||
Sbjct: 9437 ggatcttttacttaaacatgtcac 9414
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>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 417     tgtaatttgtccacctcttg 436
               ||||||||||||||||||||
Sbjct: 1429842 tgtaatttgtccacctcttg 1429823
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>dbj|AK154192.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630008C04
            product:protein phosphatase 1F (PP2C domain containing),
            full insert sequence
          Length = 4819

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   ctcttcccaaaagaatcccc 54
            ||||||||||||||||||||
Sbjct: 3863 ctcttcccaaaagaatcccc 3882
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>dbj|AK164964.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130009K08 product:protein phosphatase 1F
            (PP2C domain containing), full insert sequence
          Length = 4796

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   ctcttcccaaaagaatcccc 54
            ||||||||||||||||||||
Sbjct: 3840 ctcttcccaaaagaatcccc 3859
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>dbj|AK221777.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds,
           clone: RAFL21-70-P12
          Length = 997

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 516 atactgacgagatgttgatg 535
           ||||||||||||||||||||
Sbjct: 478 atactgacgagatgttgatg 459
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>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 170988

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 101    ggatcttttatttaaacatgtcac 124
              |||||||||| |||||||||||||
Sbjct: 122986 ggatcttttacttaaacatgtcac 122963
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>dbj|AK048669.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130099K08 product:unclassifiable, full
            insert sequence
          Length = 3604

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   ctcttcccaaaagaatcccc 54
            ||||||||||||||||||||
Sbjct: 2648 ctcttcccaaaagaatcccc 2667
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>dbj|AK041719.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630032B19 product:unclassifiable, full
            insert sequence
          Length = 1616

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   aaaagtgctgtttggaattg 100
            ||||||||||||||||||||
Sbjct: 1402 aaaagtgctgtttggaattg 1421
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>gb|AF370483.1|AF370483 Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 1323

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 516 atactgacgagatgttgatg 535
           ||||||||||||||||||||
Sbjct: 805 atactgacgagatgttgatg 786
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 25       tttatttacactcttcccaa 44
                ||||||||||||||||||||
Sbjct: 27256544 tttatttacactcttcccaa 27256525
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>emb|BX677676.6| Zebrafish DNA sequence from clone DKEYP-12A9 in linkage group 2, complete
              sequence
          Length = 169301

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     acatgcagacagcagaatca 77
              ||||||||||||||||||||
Sbjct: 133616 acatgcagacagcagaatca 133635
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>emb|BX814191.1|CNS0AC5I Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB60ZB07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1265

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 516 atactgacgagatgttgatg 535
           ||||||||||||||||||||
Sbjct: 797 atactgacgagatgttgatg 778
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>gb|AC110768.5| Homo sapiens BAC clone RP11-136I13 from 4, complete sequence
          Length = 129711

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   acctccaggcctgagatgtg 342
             ||||||||||||||||||||
Sbjct: 22050 acctccaggcctgagatgtg 22031
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>gb|AC022078.12|AC022078 Homo sapiens 12p BAC RP11-498P8 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 169416

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 530   ttgatgaaacgaacatctga 549
             ||||||||||||||||||||
Sbjct: 37770 ttgatgaaacgaacatctga 37789
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>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0623F08
          Length = 154540

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    tttatttacactcttcccaa 44
             ||||||||||||||||||||
Sbjct: 79747 tttatttacactcttcccaa 79728
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>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete
              sequence
          Length = 107527

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 516    atactgacgagatgttgatg 535
              ||||||||||||||||||||
Sbjct: 105702 atactgacgagatgttgatg 105721
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>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete
              sequence
          Length = 265524

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 101    ggatcttttatttaaacatgtcac 124
              |||||||||| |||||||||||||
Sbjct: 243138 ggatcttttacttaaacatgtcac 243115
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>emb|BX293540.5| Zebrafish DNA sequence from clone DKEY-255N2 in linkage group 8, complete
              sequence
          Length = 181168

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     aatcaataaaaagtgctgtt 92
              ||||||||||||||||||||
Sbjct: 145508 aatcaataaaaagtgctgtt 145489
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>ref|NM_176833.2| Mus musculus protein phosphatase 1F (PP2C domain containing) (Ppm1f),
            mRNA
          Length = 4783

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   ctcttcccaaaagaatcccc 54
            ||||||||||||||||||||
Sbjct: 3809 ctcttcccaaaagaatcccc 3828
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>emb|CT010502.13| Mouse DNA sequence from clone RP23-27H19 on chromosome 17, complete
             sequence
          Length = 246273

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    aaaagtgctgtttggaattg 100
             ||||||||||||||||||||
Sbjct: 52422 aaaagtgctgtttggaattg 52441
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>emb|AL844552.4| Mouse DNA sequence from clone RP23-265N10 on chromosome 2, complete
             sequence
          Length = 77710

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   aagaatcatgacttattcat 146
             ||||||||||||||||||||
Sbjct: 75764 aagaatcatgacttattcat 75783


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,921,670
Number of Sequences: 3902068
Number of extensions: 5921670
Number of successful extensions: 114262
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114107
Number of HSP's gapped (non-prelim): 155
length of query: 676
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 653
effective length of database: 17,143,297,704
effective search space: 11194573400712
effective search space used: 11194573400712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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