>gb|AY107155.1| Zea mays PCO068737 mRNA sequence
          Length = 703

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 89/109 (81%)
 Strand = Plus / Minus

                                                                       
Query: 359 gaatcatccccgccagagagcaaccagcgcatgtaccccgccccgtcgtccagggaggag 418
           ||||||||||| ||||| ||||||||||| |  ||| || | || || |||| ||| || 
Sbjct: 316 gaatcatccccaccagatagcaaccagcgaagatactccactccatcatccaaggatgaa 257

                                                            
Query: 419 gcctcgctggggatggtcacccgcttgcgagtcagcgtctcgaccgtca 467
           ||||||| || ||||||||||| |||||| ||||| || || |||||||
Sbjct: 256 gcctcgccggagatggtcaccctcttgcgtgtcagtgtttccaccgtca 208

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 128/163 (78%)
 Strand = Plus / Plus

                                                                          
Query: 361    atcatccccgccagagagcaaccagcgcatgtaccccgccccgtcgtccagggaggaggc 420
              ||||||||| ||||| ||||||||||||| |||| | |  || | |||||  || || ||
Sbjct: 854129 atcatccccaccagaaagcaaccagcgcaggtactcagttccattgtccaacgacgaagc 854188

                                                                          
Query: 421    ctcgctggggatggtcacccgcttgcgagtcagcgtctcgaccgtcacggccgccctctt 480
               |||| | | |||||||||| |||||| || || || ||||| ||||| ||   ||||||
Sbjct: 854189 gtcgccgtgcatggtcaccctcttgcgcgtaagagtttcgacagtcacagctttcctctt 854248

                                                         
Query: 481    ccgcccgcctcttgggcgcgagcgcagctgctcgtccatctcc 523
              ||| || ||||| || | |||| | | ||||||||||||||||
Sbjct: 854249 ccgtccacctctcggacacgagagtaactgctcgtccatctcc 854291

>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1442_E05
          Length = 162407

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 128/163 (78%)
 Strand = Plus / Plus

                                                                         
Query: 361   atcatccccgccagagagcaaccagcgcatgtaccccgccccgtcgtccagggaggaggc 420
             ||||||||| ||||| ||||||||||||| |||| | |  || | |||||  || || ||
Sbjct: 63337 atcatccccaccagaaagcaaccagcgcaggtactcagttccattgtccaacgacgaagc 63396

                                                                         
Query: 421   ctcgctggggatggtcacccgcttgcgagtcagcgtctcgaccgtcacggccgccctctt 480
              |||| | | |||||||||| |||||| || || || ||||| ||||| ||   ||||||
Sbjct: 63397 gtcgccgtgcatggtcaccctcttgcgcgtaagagtttcgacagtcacagctttcctctt 63456

                                                        
Query: 481   ccgcccgcctcttgggcgcgagcgcagctgctcgtccatctcc 523
             ||| || ||||| || | |||| | | ||||||||||||||||
Sbjct: 63457 ccgtccacctctcggacacgagagtaactgctcgtccatctcc 63499

>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0036E06
          Length = 137926

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 128/163 (78%)
 Strand = Plus / Plus

                                                                          
Query: 361    atcatccccgccagagagcaaccagcgcatgtaccccgccccgtcgtccagggaggaggc 420
              ||||||||| ||||| ||||||||||||| |||| | |  || | |||||  || || ||
Sbjct: 132260 atcatccccaccagaaagcaaccagcgcaggtactcagttccattgtccaacgacgaagc 132319

                                                                          
Query: 421    ctcgctggggatggtcacccgcttgcgagtcagcgtctcgaccgtcacggccgccctctt 480
               |||| | | |||||||||| |||||| || || || ||||| ||||| ||   ||||||
Sbjct: 132320 gtcgccgtgcatggtcaccctcttgcgcgtaagagtttcgacagtcacagctttcctctt 132379

                                                         
Query: 481    ccgcccgcctcttgggcgcgagcgcagctgctcgtccatctcc 523
              ||| || ||||| || | |||| | | ||||||||||||||||
Sbjct: 132380 ccgtccacctctcggacacgagagtaactgctcgtccatctcc 132422

>dbj|AK100473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093M20, full
            insert sequence
          Length = 2914

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 128/163 (78%)
 Strand = Plus / Minus

                                                                        
Query: 361  atcatccccgccagagagcaaccagcgcatgtaccccgccccgtcgtccagggaggaggc 420
            ||||||||| ||||| ||||||||||||| |||| | |  || | |||||  || || ||
Sbjct: 2580 atcatccccaccagaaagcaaccagcgcaggtactcagttccattgtccaacgacgaagc 2521

                                                                        
Query: 421  ctcgctggggatggtcacccgcttgcgagtcagcgtctcgaccgtcacggccgccctctt 480
             |||| | | |||||||||| |||||| || || || ||||| ||||| ||   ||||||
Sbjct: 2520 gtcgccgtgcatggtcaccctcttgcgcgtaagagtttcgacagtcacagctttcctctt 2461

                                                       
Query: 481  ccgcccgcctcttgggcgcgagcgcagctgctcgtccatctcc 523
            ||| || ||||| || | |||| | | ||||||||||||||||
Sbjct: 2460 ccgtccacctctcggacacgagagtaactgctcgtccatctcc 2418

>gb|AY616056.1| Prototheca wickerhamii plastid pyruvate kinase mRNA, partial cds;
           nuclear gene for plastid product
          Length = 780

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 406 gtccagggaggaggcctcgctgg 428
           |||||||||||||||||||||||
Sbjct: 290 gtccagggaggaggcctcgctgg 268

>emb|CR381684.9| Zebrafish DNA sequence from clone CH211-28P3 in linkage group 23,
              complete sequence
          Length = 184232

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 308    caaaacgtactgcaacaacat 328
              |||||||||||||||||||||
Sbjct: 167987 caaaacgtactgcaacaacat 168007

>gb|AC010058.7| Drosophila melanogaster 3L BAC RP98-26L14 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 181950

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 69     caacaccaagcaaccatccaa 89
              |||||||||||||||||||||
Sbjct: 132348 caacaccaagcaaccatccaa 132328

>gb|AC154430.3| Mus musculus BAC clone RP24-208K8 from chromosome 16, complete sequence
          Length = 178222

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 211    tctgcatacatacacacaaac 231
              |||||||||||||||||||||
Sbjct: 101567 tctgcatacatacacacaaac 101587

>gb|AC021015.4| Homo sapiens BAC clone RP11-320C1 from 2, complete sequence
          Length = 148997

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 213    tgcatacatacacacaaacgt 233
              |||||||||||||||||||||
Sbjct: 111727 tgcatacatacacacaaacgt 111707

>emb|BX005458.19| Zebrafish DNA sequence from clone CH211-173L10 in linkage group 18,
             complete sequence
          Length = 140289

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 87    caaaacacaacacagatttat 107
             |||||||||||||||||||||
Sbjct: 14073 caaaacacaacacagatttat 14053

>gb|AE003547.3| Drosophila melanogaster chromosome 3L, section 38 of 83 of the complete
              sequence
          Length = 281339

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 69     caacaccaagcaaccatccaa 89
              |||||||||||||||||||||
Sbjct: 107237 caacaccaagcaaccatccaa 107257

>ref|XM_816966.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508153.390) partial mRNA
          Length = 1035

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 462 ccgtcacggccgccctcttccgcc 485
           |||||||||||||| |||||||||
Sbjct: 448 ccgtcacggccgccttcttccgcc 425

>emb|BX571869.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              11/17
          Length = 349284

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    caaccacaactgacttgagc 264
              ||||||||||||||||||||
Sbjct: 279272 caaccacaactgacttgagc 279291

>gb|AC127185.3| Rattus norvegicus  BAC CH230-28E5 (Children's Hospital Oakland Research
             Institute Rat (BN/SsNHsd/MCW) BAC library) complete
             sequence
          Length = 233648

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   ccccaaactagctactacca 157
             ||||||||||||||||||||
Sbjct: 89939 ccccaaactagctactacca 89958

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 470     gccgccctcttccgcccgcc 489
               ||||||||||||||||||||
Sbjct: 7829570 gccgccctcttccgcccgcc 7829589

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     cagcaaattcgacaacaact 56
              ||||||||||||||||||||
Sbjct: 991103 cagcaaattcgacaacaact 991122

>gb|AC091100.14| Homo sapiens chromosome 15, clone RP11-593F23, complete sequence
          Length = 180227

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   tgctaaatcagaactctgca 216
             ||||||||||||||||||||
Sbjct: 91508 tgctaaatcagaactctgca 91527

>dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0523A04
          Length = 149049

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 470   gccgccctcttccgcccgcc 489
             ||||||||||||||||||||
Sbjct: 78568 gccgccctcttccgcccgcc 78587

>dbj|AB055927.1| Procambarus clarkii mRNA for projectin, complete cds
          Length = 27060

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 420   cctcgctggggatggtcacccgct 443
             ||||||||| ||||||||||||||
Sbjct: 10812 cctcgctggtgatggtcacccgct 10789

>gb|AC087780.19| Mus musculus strain C57BL/6J chromosome 1 clone rp23-324b17, complete
             sequence
          Length = 206924

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   ctgcatacatacacacaaac 231
             ||||||||||||||||||||
Sbjct: 38507 ctgcatacatacacacaaac 38488

>gb|AC145927.3| Gallus gallus BAC clone CH261-29M22 from chromosome unknown, complete
              sequence
          Length = 227692

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    acaactgacttgagcagcaa 269
              ||||||||||||||||||||
Sbjct: 176497 acaactgacttgagcagcaa 176516

>emb|AL805901.6| Mouse DNA sequence from clone RP23-24K4 on chromosome X, complete
              sequence
          Length = 243012

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    tttatgatggctattacaac 122
              ||||||||||||||||||||
Sbjct: 208757 tttatgatggctattacaac 208776


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,346,974
Number of Sequences: 3902068
Number of extensions: 4346974
Number of successful extensions: 117299
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117181
Number of HSP's gapped (non-prelim): 117
length of query: 557
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 534
effective length of database: 17,143,297,704
effective search space: 9154520973936
effective search space used: 9154520973936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)