ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC159628.2| Mus musculus BAC clone RP24-206C4 from chromosome... 42 0.54
2gb|AC157276.2| Mus musculus BAC clone RP23-426N20 from chromosom... 42 0.54
3emb|AL669892.11| Mouse DNA sequence from clone RP23-31K14 on chr... 40 2.1
4gb|AC161034.23| Medicago truncatula clone mth2-53o24, complete s... 40 2.1
5emb|BX640507.8| Zebrafish DNA sequence from clone DKEY-97O1 in l... 40 2.1
6emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102 40 2.1
7emb|BX322562.1|HSQ21A11 Homo sapiens chromosome 21 from cosmid L... 40 2.1
8emb|CT485678.1| Xenopus tropicalis finished cDNA, clone TEgg038i22 40 2.1
9gb|DQ235090.1| Cricetulus griseus external transcribed spacer, 1... 38 8.4
10gb|AC160400.12| Mus musculus 6 BAC RP23-321M22 (Roswell Park Can... 38 8.4
11gb|AC150004.3| Mus musculus chromosome 7, clone RP24-368P9, comp... 38 8.4
12gb|AC102413.8| Mus musculus chromosome 3, clone RP24-462F18, com... 38 8.4
13gb|DQ481667.1| Takifugu rubripes HoxCa gene cluster, complete se... 38 8.4
14gb|U88183.1| Caenorhabditis elegans cosmid ZK377, complete sequence 38 8.4
15gb|AC165154.2| Mus musculus BAC clone RP23-302C3 from chromosome... 38 8.4
16gb|AC006316.2| Homo sapiens PAC clone RP4-672O11 from 7, complet... 38 8.4
17emb|CT009553.4| M.truncatula DNA sequence from clone MTH2-115C19... 38 8.4
18gb|AC146815.1| Mus musculus BAC clone RP23-239A11 from chromosom... 38 8.4
19gb|AC135238.4| Mus musculus BAC clone RP23-314I1 from chromosome... 38 8.4
20gb|AC127262.3| Mus musculus BAC clone RP24-326H8 from chromosome... 38 8.4
21gb|AC122038.3| Mus musculus BAC clone RP24-427G24 from chromosom... 38 8.4
22gb|AC122880.4| Mus musculus BAC clone RP23-77F18 from 8, complet... 38 8.4
23ref|XM_843895.1| PREDICTED: Canis familiaris similar to 60S ribo... 38 8.4
24emb|Z93015.9|HS169I5 Human DNA sequence from clone RP1-169I5 on ... 38 8.4
25emb|AL365202.19| Human DNA sequence from clone RP11-326A8 on chr... 38 8.4
26emb|AL390247.11| Human DNA sequence from clone RP11-778A10 on ch... 38 8.4
27emb|AL356285.9| Human DNA sequence from clone RP11-569O4 on chro... 38 8.4
28gb|AC119640.13| Rattus norvegicus 13 BAC CH230-444B7 (Children's... 38 8.4
29gb|U95620.1|AH005559S08 Fugu rubripes clone b8b6gap.2.267 genomi... 38 8.4
30emb|AL049563.4|HS68D15 Human DNA sequence from clone RP1-68D15 o... 38 8.4
31emb|BX539346.8| Zebrafish DNA sequence from clone DKEYP-73G7 in ... 38 8.4
32tpg|BK003913.1| TPA: TPA_inf: Drosophila melanogaster HDC07194 (... 38 8.4
33dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 38 8.4
34gb|AC110775.3| Homo sapiens BAC clone RP11-290O12 from 4, comple... 38 8.4
35gb|AC015674.12| Homo sapiens chromosome 17, clone RP11-138C9, co... 38 8.4
36gb|AC025682.6| Homo sapiens chromosome 17, clone RP11-580I16, co... 38 8.4
37gb|AC099028.1| Drosophila melanogaster, chromosome 2R, region 55... 38 8.4
38dbj|AK170907.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 38 8.4
39gb|AC008357.8| Drosophila melanogaster, chromosome 3R, region 86... 38 8.4
40gb|AC154855.2| Mus musculus BAC clone RP23-18N3 from chromosome ... 38 8.4
41gb|AC037492.5|AC037492 Homo sapiens chromosome 8, clone RP11-38H... 38 8.4
42gb|AC104309.3| Homo sapiens BAC clone RP11-601G23 from 2, comple... 38 8.4
43gb|AC092824.13| Homo sapiens 12 BAC RP11-158N24 (Roswell Park Ca... 38 8.4
44gb|AC093833.2| Homo sapiens BAC clone RP11-405K23 from 2, comple... 38 8.4
45gb|AC092764.3| Pan troglodytes clone RP43-37J6, complete sequence 38 8.4
46gb|AC007773.1|AC007773 Homo sapiens chromosome 19, BAC 275282 (C... 38 8.4
47gb|AE003687.3| Drosophila melanogaster chromosome 3R, section 25... 38 8.4
48gb|AE003798.3| Drosophila melanogaster chromosome 2R, section 52... 38 8.4
49gb|AC102602.9| Mus musculus chromosome 9, clone RP23-381L11, com... 38 8.4
50gb|AC104324.21| Mus musculus strain C57BL/6J chromosome 6 clone ... 38 8.4
51gb|AC157939.15| Mus musculus chromosome 3, clone RP23-51P17, com... 38 8.4
52gb|AC164879.2| Mus musculus BAC clone RP23-354H10 from chromosom... 38 8.4
53emb|AL935037.9| Zebrafish DNA sequence from clone CH211-188E8 in... 38 8.4
54emb|BX088571.5| Zebrafish DNA sequence from clone CH211-208H7 in... 38 8.4
55emb|AL954322.4| Zebrafish DNA sequence from clone CH211-229G11, ... 38 8.4
56gb|AC134566.5| Mus musculus BAC clone RP24-196G8 from 3, complet... 38 8.4
57gb|AC004657.1|AC004657 Drosophila melanogaster DNA sequence (P1s... 38 8.4
58gb|AC151732.2| Mus musculus BAC clone RP23-240L23 from 8, comple... 38 8.4
59gb|AC102628.5| Mus musculus chromosome 7, clone RP23-467K15, com... 38 8.4 
>gb|AC159628.2| Mus musculus BAC clone RP24-206C4 from chromosome 12, complete sequence
          Length = 161791

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1      aaacaaagaaacaaaacatagtgca 25
              |||||||||||||||||| ||||||
Sbjct: 144099 aaacaaagaaacaaaacaaagtgca 144075
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>gb|AC157276.2| Mus musculus BAC clone RP23-426N20 from chromosome 12, complete sequence
          Length = 220385

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1      aaacaaagaaacaaaacatagtgca 25
              |||||||||||||||||| ||||||
Sbjct: 167308 aaacaaagaaacaaaacaaagtgca 167332
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>emb|AL669892.11| Mouse DNA sequence from clone RP23-31K14 on chromosome 11 Contains a
             hepatitis A virus cellular receptor (Havcr) pseudogene,
             the Timd2 gene for T-cell immunoglobulin and mucin domain
             containing 2, a ribosomal protein L7 (Rpl7) pseudogene,
             the Havcr1 gene for hepatitis A virus cellular receptor 1
             and a CpG island, complete sequence
          Length = 158979

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaacaaagaaacaaaacata 20
             ||||||||||||||||||||
Sbjct: 90443 aaacaaagaaacaaaacata 90462



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaacaaagaaacaaaacata 20
             ||||||||||||||||||||
Sbjct: 75740 aaacaaagaaacaaaacata 75721
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>gb|AC161034.23| Medicago truncatula clone mth2-53o24, complete sequence
          Length = 128806

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     caaagaaacaaaacatagtg 23
             ||||||||||||||||||||
Sbjct: 22202 caaagaaacaaaacatagtg 22183
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>emb|BX640507.8| Zebrafish DNA sequence from clone DKEY-97O1 in linkage group 14,
             complete sequence
          Length = 189019

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaacaaagaaacaaaacata 20
             ||||||||||||||||||||
Sbjct: 11794 aaacaaagaaacaaaacata 11775
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>emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102
          Length = 340000

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   tgcaaatgccaactatctaa 165
             ||||||||||||||||||||
Sbjct: 99373 tgcaaatgccaactatctaa 99354
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>emb|BX322562.1|HSQ21A11 Homo sapiens chromosome 21 from cosmid LL21NC02-21A1 map 21q22.3 region
             D21S171-LA161, complete sequence
          Length = 45600

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   tgcaaatgccaactatctaa 165
             ||||||||||||||||||||
Sbjct: 17837 tgcaaatgccaactatctaa 17818
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>emb|CT485678.1| Xenopus tropicalis finished cDNA, clone TEgg038i22
          Length = 3556

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   agcagcccaccatacaaact 118
            ||||||||||||||||||||
Sbjct: 1437 agcagcccaccatacaaact 1418
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>gb|DQ235090.1| Cricetulus griseus external transcribed spacer, 18S ribosomal RNA
           gene, internal transcribed spacer 1, and 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 15029

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   aaacaaagaaacaaaacat 19
           |||||||||||||||||||
Sbjct: 421 aaacaaagaaacaaaacat 439
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>gb|AC160400.12| Mus musculus 6 BAC RP23-321M22 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 219634

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     aaagaaacaaaacatagtg 23
             |||||||||||||||||||
Sbjct: 46413 aaagaaacaaaacatagtg 46431
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>gb|AC150004.3| Mus musculus chromosome 7, clone RP24-368P9, complete sequence
          Length = 176113

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      aaacaaagaaacaaaacat 19
              |||||||||||||||||||
Sbjct: 136832 aaacaaagaaacaaaacat 136814
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>gb|AC102413.8| Mus musculus chromosome 3, clone RP24-462F18, complete sequence
          Length = 181851

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     aaacaaagaaacaaaacat 19
             |||||||||||||||||||
Sbjct: 45383 aaacaaagaaacaaaacat 45365
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>gb|DQ481667.1| Takifugu rubripes HoxCa gene cluster, complete sequence
          Length = 378763

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      aaacaaagaaacaaaacat 19
              |||||||||||||||||||
Sbjct: 105240 aaacaaagaaacaaaacat 105258
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>gb|U88183.1| Caenorhabditis elegans cosmid ZK377, complete sequence
          Length = 32786

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     aaagaaacaaaacatagtg 23
             |||||||||||||||||||
Sbjct: 18254 aaagaaacaaaacatagtg 18272
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>gb|AC165154.2| Mus musculus BAC clone RP23-302C3 from chromosome 14, complete
            sequence
          Length = 225721

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 1    aaacaaagaaacaaaacat 19
            |||||||||||||||||||
Sbjct: 9574 aaacaaagaaacaaaacat 9556
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>gb|AC006316.2| Homo sapiens PAC clone RP4-672O11 from 7, complete sequence
          Length = 143369

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     aaacaaagaaacaaaacat 19
             |||||||||||||||||||
Sbjct: 83721 aaacaaagaaacaaaacat 83739
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>emb|CT009553.4| M.truncatula DNA sequence from clone MTH2-115C19 on chromosome 3,
             complete sequence
          Length = 125987

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 2     aacaaagaaacaaaacatagtgc 24
             ||||||| |||||||||||||||
Sbjct: 85609 aacaaagcaacaaaacatagtgc 85631
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>gb|AC146815.1| Mus musculus BAC clone RP23-239A11 from chromosome 8, complete sequence
          Length = 203073

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      aaacaaagaaacaaaacat 19
              |||||||||||||||||||
Sbjct: 200523 aaacaaagaaacaaaacat 200541
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>gb|AC135238.4| Mus musculus BAC clone RP23-314I1 from chromosome 3, complete sequence
          Length = 247498

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      aaacaaagaaacaaaacat 19
              |||||||||||||||||||
Sbjct: 222301 aaacaaagaaacaaaacat 222283
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>gb|AC127262.3| Mus musculus BAC clone RP24-326H8 from chromosome 9, complete
          sequence
          Length = 181862

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 1  aaacaaagaaacaaaacat 19
          |||||||||||||||||||
Sbjct: 56 aaacaaagaaacaaaacat 38
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>gb|AC122038.3| Mus musculus BAC clone RP24-427G24 from chromosome 3, complete sequence
          Length = 188751

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      aaacaaagaaacaaaacat 19
              |||||||||||||||||||
Sbjct: 139432 aaacaaagaaacaaaacat 139414
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>gb|AC122880.4| Mus musculus BAC clone RP23-77F18 from 8, complete sequence
          Length = 189549

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      aaacaaagaaacaaaacat 19
              |||||||||||||||||||
Sbjct: 180568 aaacaaagaaacaaaacat 180550
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>ref|XM_843895.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L32
           (LOC607906), mRNA
          Length = 420

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 89  ttgtgcaaagagcagccca 107
           |||||||||||||||||||
Sbjct: 344 ttgtgcaaagagcagccca 362
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>emb|Z93015.9|HS169I5 Human DNA sequence from clone RP1-169I5 on chromosome Xp11 Contains the
             3' end of the DDX3 gene for DEAD/H (Asp-Glu-Ala-Asp/His)
             box polypeptide 3, the NYX gene for  nyctalopin, a gem
             (nuclear organelle) associated protein 7 (GEMIN7)
             pseudogene and two CpG islands, complete sequence
          Length = 133568

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 1     aaacaaagaaacaaaacatagtg 23
             ||||||||||||||||| |||||
Sbjct: 15356 aaacaaagaaacaaaacttagtg 15334
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>emb|AL365202.19| Human DNA sequence from clone RP11-326A8 on chromosome 9 Contains the 5'
              end of the RFX3 gene for regulatory factor X, 3 (influences
              HLA class II expression), the 5' end of a novel gene and a
              CpG island, complete sequence
          Length = 177164

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      aaacaaagaaacaaaacat 19
              |||||||||||||||||||
Sbjct: 113877 aaacaaagaaacaaaacat 113895
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>emb|AL390247.11| Human DNA sequence from clone RP11-778A10 on chromosome 6, complete
             sequence
          Length = 161241

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 1     aaacaaagaaacaaaacatagtg 23
             |||||||||||||||| ||||||
Sbjct: 49491 aaacaaagaaacaaaaaatagtg 49513
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>emb|AL356285.9| Human DNA sequence from clone RP11-569O4 on chromosome 13 Contains the
             5' end of the XPO4 gene for likely ortholog of mouse
             exportin 4, a CCR4-NOT transcription complex, subunit 4
             (CNOT4) (NOT4, NOT4H, CLONE243) pseudogene, a
             heterogeneous nuclear ribonucleoprotein A1
             (HNRPA1)(HNRNPA1) pseudogene, a pseudogene similar to part
             of peptidylprolyl isomerase A (cyclophilin A) (PPIA), a
             Laminin receptor 1 (67kD, ribosomal protein
             SA)(LAMR1)(LRP, p40, RPSA, 37LRP, LAMBR) pseudogene, the
             3' end of the LATS2 gene for LATS, large tumor suppressor,
             homolog 2 (LATS (large tumor suppressor, Drosophila)
             homolog 2), two novel genes and three CpG islands,
             complete sequence
          Length = 183597

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     caaagaaacaaaacatagt 22
             |||||||||||||||||||
Sbjct: 18175 caaagaaacaaaacatagt 18193
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>gb|AC119640.13| Rattus norvegicus 13 BAC CH230-444B7 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 120319

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     aaacaaagaaacaaaacat 19
             |||||||||||||||||||
Sbjct: 31148 aaacaaagaaacaaaacat 31130
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>gb|U95620.1|AH005559S08 Fugu rubripes clone b8b6gap.2.267 genomic DNA
          Length = 258

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   aaacaaagaaacaaaacat 19
           |||||||||||||||||||
Sbjct: 147 aaacaaagaaacaaaacat 165
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>emb|AL049563.4|HS68D15 Human DNA sequence from clone RP1-68D15 on chromosome X Contains the 3'
             end of a novel gene (FLJ23018) and the 3' end of the TRPC5
             gene for transient receptor potential cation channel
             subfamily C member 5, complete sequence
          Length = 113028

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     aacaaagaaacaaaacata 20
             |||||||||||||||||||
Sbjct: 21608 aacaaagaaacaaaacata 21590
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>emb|BX539346.8| Zebrafish DNA sequence from clone DKEYP-73G7 in linkage group 23,
              complete sequence
          Length = 171486

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      aaacaaagaaacaaaacat 19
              |||||||||||||||||||
Sbjct: 140019 aaacaaagaaacaaaacat 140037
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>tpg|BK003913.1| TPA: TPA_inf: Drosophila melanogaster HDC07194 (HDC07194) gene,
           complete cds
          Length = 744

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 1   aaacaaagaaacaaaacat 19
           |||||||||||||||||||
Sbjct: 458 aaacaaagaaacaaaacat 440
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 40      ctatcccctgctgtcctcg 58
               |||||||||||||||||||
Sbjct: 1662493 ctatcccctgctgtcctcg 1662475
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>gb|AC110775.3| Homo sapiens BAC clone RP11-290O12 from 4, complete sequence
          Length = 210300

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      aacaaagaaacaaaacata 20
              |||||||||||||||||||
Sbjct: 143810 aacaaagaaacaaaacata 143828
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>gb|AC015674.12| Homo sapiens chromosome 17, clone RP11-138C9, complete sequence
          Length = 187822

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      aacaaagaaacaaaacata 20
              |||||||||||||||||||
Sbjct: 160756 aacaaagaaacaaaacata 160774
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>gb|AC025682.6| Homo sapiens chromosome 17, clone RP11-580I16, complete sequence
          Length = 158135

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     aacaaagaaacaaaacata 20
             |||||||||||||||||||
Sbjct: 20541 aacaaagaaacaaaacata 20559
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>gb|AC099028.1| Drosophila melanogaster, chromosome 2R, region 55F-56X, BAC clone
             BACR08F09, complete sequence
          Length = 192358

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     aaacaaagaaacaaaacat 19
             |||||||||||||||||||
Sbjct: 62112 aaacaaagaaacaaaacat 62094
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>dbj|AK170907.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630208M21
           product:WW domain binding protein 1, full insert
           sequence
          Length = 1918

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 5   aaagaaacaaaacatagtg 23
           |||||||||||||||||||
Sbjct: 522 aaagaaacaaaacatagtg 504
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>gb|AC008357.8| Drosophila melanogaster, chromosome 3R, region 86A-86A, BAC clone
              BACR03L12, complete sequence
          Length = 190672

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 110    atacaaactcaatggaatg 128
              |||||||||||||||||||
Sbjct: 124475 atacaaactcaatggaatg 124457
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>gb|AC154855.2| Mus musculus BAC clone RP23-18N3 from chromosome 14, complete sequence
          Length = 197373

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 1     aaacaaagaaacaaaacatagtg 23
             ||||||| |||||||||||||||
Sbjct: 41846 aaacaaacaaacaaaacatagtg 41868
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>gb|AC037492.5|AC037492 Homo sapiens chromosome 8, clone RP11-38H17, complete sequence
          Length = 168278

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      aaacaaagaaacaaaacat 19
              |||||||||||||||||||
Sbjct: 115188 aaacaaagaaacaaaacat 115206
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>gb|AC104309.3| Homo sapiens BAC clone RP11-601G23 from 2, complete sequence
          Length = 26532

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     aaacaaagaaacaaaacat 19
             |||||||||||||||||||
Sbjct: 22770 aaacaaagaaacaaaacat 22788
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>gb|AC092824.13| Homo sapiens 12 BAC RP11-158N24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 40182

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     aaacaaagaaacaaaacat 19
             |||||||||||||||||||
Sbjct: 18478 aaacaaagaaacaaaacat 18496
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>gb|AC093833.2| Homo sapiens BAC clone RP11-405K23 from 2, complete sequence
          Length = 112968

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     aaacaaagaaacaaaacat 19
             |||||||||||||||||||
Sbjct: 72410 aaacaaagaaacaaaacat 72428
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>gb|AC092764.3| Pan troglodytes clone RP43-37J6, complete sequence
          Length = 172761

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      aaacaaagaaacaaaacat 19
              |||||||||||||||||||
Sbjct: 139980 aaacaaagaaacaaaacat 139962
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>gb|AC007773.1|AC007773 Homo sapiens chromosome 19, BAC 275282 (CIT-B-325L16), complete
             sequence
          Length = 180316

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     aaacaaagaaacaaaacat 19
             |||||||||||||||||||
Sbjct: 46222 aaacaaagaaacaaaacat 46204
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>gb|AE003687.3| Drosophila melanogaster chromosome 3R, section 25 of 118 of the
            complete sequence
          Length = 260168

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 110  atacaaactcaatggaatg 128
            |||||||||||||||||||
Sbjct: 5366 atacaaactcaatggaatg 5348
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>gb|AE003798.3| Drosophila melanogaster chromosome 2R, section 52 of 73 of the complete
             sequence
          Length = 242365

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     aaacaaagaaacaaaacat 19
             |||||||||||||||||||
Sbjct: 58576 aaacaaagaaacaaaacat 58558
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>gb|AC102602.9| Mus musculus chromosome 9, clone RP23-381L11, complete sequence
          Length = 253504

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     aaacaaagaaacaaaacat 19
             |||||||||||||||||||
Sbjct: 56678 aaacaaagaaacaaaacat 56696
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>gb|AC104324.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-177j21, complete
              sequence
          Length = 193277

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 5      aaagaaacaaaacatagtg 23
              |||||||||||||||||||
Sbjct: 157122 aaagaaacaaaacatagtg 157140
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>gb|AC157939.15| Mus musculus chromosome 3, clone RP23-51P17, complete sequence
          Length = 240367

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     aaacaaagaaacaaaacat 19
             |||||||||||||||||||
Sbjct: 77546 aaacaaagaaacaaaacat 77564
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>gb|AC164879.2| Mus musculus BAC clone RP23-354H10 from chromosome 14, complete sequence
          Length = 210602

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      aaacaaagaaacaaaacat 19
              |||||||||||||||||||
Sbjct: 154511 aaacaaagaaacaaaacat 154493
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>emb|AL935037.9| Zebrafish DNA sequence from clone CH211-188E8 in linkage group 1,
             complete sequence
          Length = 141034

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     aaacaaagaaacaaaacat 19
             |||||||||||||||||||
Sbjct: 53411 aaacaaagaaacaaaacat 53393
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>emb|BX088571.5| Zebrafish DNA sequence from clone CH211-208H7 in linkage group 1,
             complete sequence
          Length = 214441

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     aaacaaagaaacaaaacat 19
             |||||||||||||||||||
Sbjct: 96834 aaacaaagaaacaaaacat 96852
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>emb|AL954322.4| Zebrafish DNA sequence from clone CH211-229G11, complete sequence
          Length = 149122

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     aaacaaagaaacaaaacat 19
             |||||||||||||||||||
Sbjct: 30853 aaacaaagaaacaaaacat 30835
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>gb|AC134566.5| Mus musculus BAC clone RP24-196G8 from 3, complete sequence
          Length = 147839

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      aaacaaagaaacaaaacat 19
              |||||||||||||||||||
Sbjct: 116999 aaacaaagaaacaaaacat 116981
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>gb|AC004657.1|AC004657 Drosophila melanogaster DNA sequence (P1s DS08204 (D183) and DS09119
            (D236)), complete sequence
          Length = 76618

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 1    aaacaaagaaacaaaacat 19
            |||||||||||||||||||
Sbjct: 7632 aaacaaagaaacaaaacat 7614
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>gb|AC151732.2| Mus musculus BAC clone RP23-240L23 from 8, complete sequence
          Length = 204634

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 90    tgtgcaaagagcagcccac 108
             |||||||||||||||||||
Sbjct: 68288 tgtgcaaagagcagcccac 68270
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>gb|AC102628.5| Mus musculus chromosome 7, clone RP23-467K15, complete sequence
          Length = 178563

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     aaacaaagaaacaaaacat 19
             |||||||||||||||||||
Sbjct: 56097 aaacaaagaaacaaaacat 56079


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,416,577
Number of Sequences: 3902068
Number of extensions: 1416577
Number of successful extensions: 109611
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109457
Number of HSP's gapped (non-prelim): 154
length of query: 173
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 151
effective length of database: 17,147,199,772
effective search space: 2589227165572
effective search space used: 2589227165572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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