ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009434.1| Triticum aestivum clone wlmk4.pk0003.f5:fis, full... 755 0.0
2ref|XM_466806.1| Oryza sativa (japonica cultivar-group), mRNA 460 e-126
3ref|XM_506871.1| PREDICTED Oryza sativa (japonica cultivar-group... 460 e-126
4dbj|AK103525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 460 e-126
5dbj|AK101006.1| Oryza sativa (japonica cultivar-group) cDNA clon... 460 e-126
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 200 3e-48
7dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic D... 200 3e-48
8gb|DQ200398.1| Solanum tuberosum clone 071C05 succinyl-CoA ligas... 94 6e-16
9gb|DQ294279.1| Solanum tuberosum clone 180E05 succinyl CoA ligas... 94 6e-16
10gb|BT013785.1| Lycopersicon esculentum clone 132678F, mRNA sequence 78 3e-11
11gb|AY180975.1| Lycopersicon esculentum succinyl CoA ligase beta ... 78 3e-11
12ref|NM_127601.2| Arabidopsis thaliana catalytic/ succinate-CoA l... 74 5e-10
13emb|AJ001808.1|ATSCLBS Arabidopsis thaliana mRNA for Succinyl-Co... 74 5e-10
14gb|AY128889.1| Arabidopsis thaliana succinyl-CoA ligase beta sub... 74 5e-10
15gb|AY099707.1| Arabidopsis thaliana succinyl-CoA ligase beta sub... 74 5e-10
16dbj|AK221149.1| Arabidopsis thaliana mRNA for succinyl-CoA ligas... 74 5e-10
17gb|AY087596.1| Arabidopsis thaliana clone 36904 mRNA, complete s... 74 5e-10
18gb|AC007109.7| Arabidopsis thaliana chromosome 2 clone T13C7 map... 72 2e-09
19gb|AC006569.5| Arabidopsis thaliana chromosome 2 clone F11A3 map... 72 2e-09
20dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome 54 5e-04
21gb|BC056353.1| Mus musculus succinate-Coenzyme A ligase, ADP-for... 52 0.002
22ref|NM_011506.1| Mus musculus succinate-Coenzyme A ligase, ADP-f... 52 0.002
23gb|BC025014.1| Mus musculus, clone IMAGE:5360696, mRNA 52 0.002
24dbj|AK132762.1| Mus musculus adult male testis cDNA, RIKEN full-... 52 0.002
25dbj|AK152783.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 52 0.002
26dbj|AK150594.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 52 0.002
27dbj|AK160130.1| Mus musculus adult male cerebellum cDNA, RIKEN f... 52 0.002
28dbj|AK153198.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 52 0.002
29dbj|AK160652.1| Mus musculus 10, 11 days embryo whole body cDNA,... 52 0.002
30dbj|AK003867.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 52 0.002
31dbj|AK088801.1| Mus musculus 2 days neonate thymus thymic cells ... 52 0.002
32gb|BC038497.1| Mus musculus succinate-Coenzyme A ligase, ADP-for... 52 0.002
33dbj|AK005273.1| Mus musculus adult male cerebellum cDNA, RIKEN f... 52 0.002
34gb|BC052774.1| Mus musculus succinate-Coenzyme A ligase, ADP-for... 52 0.002
35dbj|AK081965.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 52 0.002
36dbj|AK215074.1| Mus musculus cDNA, clone:Y2G0133O05, strand:plus... 52 0.002
37gb|BC057605.1| Mus musculus succinate-Coenzyme A ligase, ADP-for... 52 0.002
38gb|AC155246.1| Mus musculus BAC clone RP24-303C15 from 14, compl... 52 0.002
39gb|AF058955.1|AF058955 Mus musculus ATP-specific succinyl-CoA sy... 52 0.002
40ref|XM_640445.1| Dictyostelium discoideum ATP-specific succinyl-... 46 0.12
41emb|X84222.2|NFBSCOAS Neocallimastix frontalis mRNA for beta-suc... 46 0.12
42gb|AC115594.2| Dictyostelium discoideum chromosome 2 map 4071862... 46 0.12
43ref|XM_639091.1| Dictyostelium discoideum GTP-specific succinyl-... 44 0.47
44gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067... 44 0.47
45gb|AF493055.1| Neocallimastix patriciarum succinyl-CoA synthetas... 42 1.9
46gb|AF332093.1|AF332093 White spot syndrome virus, complete genome 42 1.9
47gb|AC114785.5| Homo sapiens BAC clone RP11-607G14 from 2, comple... 42 1.9
48gb|AF369029.2| White spot syndrome virus, complete genome 42 1.9
49gb|AF440570.1| Shrimp white spot syndrome virus, complete genome 42 1.9
50gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 40 7.3
51gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 7.3
52ref|XM_847251.1| PREDICTED: Canis familiaris hypothetical protei... 40 7.3
53ref|XM_729265.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 7.3
54ref|XM_740130.1| Plasmodium chabaudi chabaudi ATP-specific succi... 40 7.3
55gb|AC005521.1| Homo sapiens PAC clone RP5-1106E3 from 7, complet... 40 7.3
56ref|XM_855542.1| PREDICTED: Canis familiaris hypothetical protei... 40 7.3
57ref|XM_844983.1| PREDICTED: Canis familiaris hypothetical protei... 40 7.3
58emb|CR769786.9| Zebrafish DNA sequence from clone DKEY-256I5 in ... 40 7.3
59emb|AL133515.9| Human DNA sequence from clone GS1-153O3 on chrom... 40 7.3
60emb|AL034545.2|HS542O23 Human DNA sequence from clone RP4-542O23... 40 7.3
61emb|BX842656.1| Bdellovibrio bacteriovorus complete genome, stra... 40 7.3
62gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 40 7.3
63dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 40 7.3
64emb|BX005210.10| Zebrafish DNA sequence from clone DKEY-222F8 in... 40 7.3
65emb|AL928936.9| Zebrafish DNA sequence from clone CH211-133H2 in... 40 7.3
66gb|AF061021.1|AF061021 Spirogyra sp. SVCK-253 actin mRNA, partia... 40 7.3
67emb|AL731682.20| Mouse DNA sequence from clone RP23-123F7 on chr... 40 7.3 
>gb|BT009434.1| Triticum aestivum clone wlmk4.pk0003.f5:fis, full insert mRNA
           sequence
          Length = 955

 Score =  755 bits (381), Expect = 0.0
 Identities = 434/448 (96%), Gaps = 3/448 (0%)
 Strand = Plus / Minus

                                                                       
Query: 94  tgcacttcaagatttcgncccccgaaatcaagtaagagagcaccactcctcttgtacgag 153
           ||||||||||||||||| |||||||||| ||| ||||||||| ||||||||| |||| ||
Sbjct: 812 tgcacttcaagatttcggcccccgaaat-aagcaagagagcagcactcctctcgtaccag 754

                                                                       
Query: 154 tgaaaacagaactttagactgatatggtacaatcatttaatcatttgaccgatgctttta 213
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 753 tgaaaacagaactttagactgatatggtacaatcatt-aatcatttgaccgatgctttta 695

                                                                       
Query: 214 cagccttctcggcagcatcatcaagatcctctgcagtgatcaatgtcattccactttcct 273
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 cagccttctctgcagcatcatcaagatcctctgcagtgatcaatgtcattccactttcct 635

                                                                       
Query: 274 taagaatccttttcccttggtctacattggtgccttctagccgaacaacaacagggacct 333
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 taagaatccttttcccttggtctacattggtgccttctagccgaacaacaacagggacct 575

                                                                       
Query: 334 taagatcaacctgtttagctgcattcactattccacttgctatcacatcacatttcatga 393
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 574 taagatcaacctgtttagctgcattcactattccacttgctatcacgtcacatttcatga 515

                                                                       
Query: 394 tacctccaaaaatgttaactagaattgccttcactctatcatctgaagtcaatatcttaa 453
           |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 514 tacctccaaaaatgttcactagaattgccttcactctatcgtctgaagtcaatatcttaa 455

                                                                       
Query: 454 atgcttccacgacctgtccctcggatgcgctcccaccaacatcaagataaattggcaggt 513
           |||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 454 atgcttccacaacctgtccctcggatgcactcccaccaacatcaaga-aaattggcaggt 396

                                       
Query: 514 gtaccaccatgcagcttaatgatgtcca 541
           ||||||||||||||||||||||||||||
Sbjct: 395 gtaccaccatgcagcttaatgatgtcca 368



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 54/62 (87%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                       
Query: 16  tgtgcccatatagatttattaacacaaagat-ncaagtttaaagcnaaactcaaagtgga 74
           ||||||||||||| |||||||||||||||||  || |||| |||  |||||| |||||||
Sbjct: 894 tgtgcccatataggtttattaacacaaagatcacatgtttgaaggaaaactccaagtgga 835

             
Query: 75  at 76
           ||
Sbjct: 834 at 833
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>ref|XM_466806.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1726

 Score =  460 bits (232), Expect = e-126
 Identities = 323/352 (91%), Gaps = 1/352 (0%)
 Strand = Plus / Minus

                                                                        
Query: 190  ttaatcatttgaccgatgcttttacagccttctcggcagcatcatcaagatcctctgcag 249
            ||||| ||||||| |||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 1393 ttaattatttgacagatgcttttacagctttctcagccgcatcatcaagatcctctgcag 1334

                                                                        
Query: 250  tgatcaatgtcattccactttccttaagaatccttttcccttggtctacattggtgcctt 309
            |||| || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 1333 tgattaaggtcattccactttcctttagaatcctcttcccttggtcaacattggtgcctt 1274

                                                                        
Query: 310  ctagccgaacaacaacagggaccttaagatcaacctgtttagctgcattcactattccac 369
            | | ||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||
Sbjct: 1273 ccaaccgaacaacaacaggcaccttcaggtcaacctgttttgctgcattcactattccac 1214

                                                                        
Query: 370  ttgctatcacatcacatttcatgatacctccaaaaatgttaactagaattgccttcactc 429
            |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 1213 ttgctatcacatcacatttcatgataccaccaaaaatgttcactagaatagccttcactc 1154

                                                                        
Query: 430  tatcatctgaagtcaatatcttaaatgcttccacgacctgtccctcggatgcgctcccac 489
            ||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| || ||||
Sbjct: 1153 tatcatcggaagtcaaaatcttaaatgcttccacaacctgtccctctgatgcacttccac 1094

                                                                
Query: 490  caacatcaagataaattggcaggtgtaccaccatgcagcttaatgatgtcca 541
            ||||||||||| ||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 1093 caacatcaaga-aaattggcaggcgtacccccatgcaacttaatgatgtcca 1043
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>ref|XM_506871.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1234_B11.18 mRNA
          Length = 1966

 Score =  460 bits (232), Expect = e-126
 Identities = 323/352 (91%), Gaps = 1/352 (0%)
 Strand = Plus / Minus

                                                                        
Query: 190  ttaatcatttgaccgatgcttttacagccttctcggcagcatcatcaagatcctctgcag 249
            ||||| ||||||| |||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 1393 ttaattatttgacagatgcttttacagctttctcagccgcatcatcaagatcctctgcag 1334

                                                                        
Query: 250  tgatcaatgtcattccactttccttaagaatccttttcccttggtctacattggtgcctt 309
            |||| || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 1333 tgattaaggtcattccactttcctttagaatcctcttcccttggtcaacattggtgcctt 1274

                                                                        
Query: 310  ctagccgaacaacaacagggaccttaagatcaacctgtttagctgcattcactattccac 369
            | | ||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||
Sbjct: 1273 ccaaccgaacaacaacaggcaccttcaggtcaacctgttttgctgcattcactattccac 1214

                                                                        
Query: 370  ttgctatcacatcacatttcatgatacctccaaaaatgttaactagaattgccttcactc 429
            |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 1213 ttgctatcacatcacatttcatgataccaccaaaaatgttcactagaatagccttcactc 1154

                                                                        
Query: 430  tatcatctgaagtcaatatcttaaatgcttccacgacctgtccctcggatgcgctcccac 489
            ||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| || ||||
Sbjct: 1153 tatcatcggaagtcaaaatcttaaatgcttccacaacctgtccctctgatgcacttccac 1094

                                                                
Query: 490  caacatcaagataaattggcaggtgtaccaccatgcagcttaatgatgtcca 541
            ||||||||||| ||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 1093 caacatcaaga-aaattggcaggcgtacccccatgcaacttaatgatgtcca 1043
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>dbj|AK103525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131K22, full
            insert sequence
          Length = 1726

 Score =  460 bits (232), Expect = e-126
 Identities = 323/352 (91%), Gaps = 1/352 (0%)
 Strand = Plus / Minus

                                                                        
Query: 190  ttaatcatttgaccgatgcttttacagccttctcggcagcatcatcaagatcctctgcag 249
            ||||| ||||||| |||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 1393 ttaattatttgacagatgcttttacagctttctcagccgcatcatcaagatcctctgcag 1334

                                                                        
Query: 250  tgatcaatgtcattccactttccttaagaatccttttcccttggtctacattggtgcctt 309
            |||| || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 1333 tgattaaggtcattccactttcctttagaatcctcttcccttggtcaacattggtgcctt 1274

                                                                        
Query: 310  ctagccgaacaacaacagggaccttaagatcaacctgtttagctgcattcactattccac 369
            | | ||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||
Sbjct: 1273 ccaaccgaacaacaacaggcaccttcaggtcaacctgttttgctgcattcactattccac 1214

                                                                        
Query: 370  ttgctatcacatcacatttcatgatacctccaaaaatgttaactagaattgccttcactc 429
            |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 1213 ttgctatcacatcacatttcatgataccaccaaaaatgttcactagaatagccttcactc 1154

                                                                        
Query: 430  tatcatctgaagtcaatatcttaaatgcttccacgacctgtccctcggatgcgctcccac 489
            ||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| || ||||
Sbjct: 1153 tatcatcggaagtcaaaatcttaaatgcttccacaacctgtccctctgatgcacttccac 1094

                                                                
Query: 490  caacatcaagataaattggcaggtgtaccaccatgcagcttaatgatgtcca 541
            ||||||||||| ||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 1093 caacatcaaga-aaattggcaggcgtacccccatgcaacttaatgatgtcca 1043
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>dbj|AK101006.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148E03, full
            insert sequence
          Length = 1966

 Score =  460 bits (232), Expect = e-126
 Identities = 323/352 (91%), Gaps = 1/352 (0%)
 Strand = Plus / Minus

                                                                        
Query: 190  ttaatcatttgaccgatgcttttacagccttctcggcagcatcatcaagatcctctgcag 249
            ||||| ||||||| |||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 1393 ttaattatttgacagatgcttttacagctttctcagccgcatcatcaagatcctctgcag 1334

                                                                        
Query: 250  tgatcaatgtcattccactttccttaagaatccttttcccttggtctacattggtgcctt 309
            |||| || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 1333 tgattaaggtcattccactttcctttagaatcctcttcccttggtcaacattggtgcctt 1274

                                                                        
Query: 310  ctagccgaacaacaacagggaccttaagatcaacctgtttagctgcattcactattccac 369
            | | ||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||
Sbjct: 1273 ccaaccgaacaacaacaggcaccttcaggtcaacctgttttgctgcattcactattccac 1214

                                                                        
Query: 370  ttgctatcacatcacatttcatgatacctccaaaaatgttaactagaattgccttcactc 429
            |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 1213 ttgctatcacatcacatttcatgataccaccaaaaatgttcactagaatagccttcactc 1154

                                                                        
Query: 430  tatcatctgaagtcaatatcttaaatgcttccacgacctgtccctcggatgcgctcccac 489
            ||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| || ||||
Sbjct: 1153 tatcatcggaagtcaaaatcttaaatgcttccacaacctgtccctctgatgcacttccac 1094

                                                                
Query: 490  caacatcaagataaattggcaggtgtaccaccatgcagcttaatgatgtcca 541
            ||||||||||| ||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 1093 caacatcaaga-aaattggcaggcgtacccccatgcaacttaatgatgtcca 1043
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  200 bits (101), Expect = 3e-48
 Identities = 122/129 (94%)
 Strand = Plus / Minus

                                                                            
Query: 341      aacctgtttagctgcattcactattccacttgctatcacatcacatttcatgatacctcc 400
                ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 24766043 aacctgttttgctgcattcactattccacttgctatcacatcacatttcatgataccacc 24765984

                                                                            
Query: 401      aaaaatgttaactagaattgccttcactctatcatctgaagtcaatatcttaaatgcttc 460
                ||||||||| |||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 24765983 aaaaatgttcactagaatagccttcactctatcatcggaagtcaaaatcttaaatgcttc 24765924

                         
Query: 461      cacgacctg 469
                ||| |||||
Sbjct: 24765923 cacaacctg 24765915



 Score =  111 bits (56), Expect = 2e-21
 Identities = 77/84 (91%)
 Strand = Plus / Minus

                                                                            
Query: 190      ttaatcatttgaccgatgcttttacagccttctcggcagcatcatcaagatcctctgcag 249
                ||||| ||||||| |||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 24766769 ttaattatttgacagatgcttttacagctttctcagccgcatcatcaagatcctctgcag 24766710

                                        
Query: 250      tgatcaatgtcattccactttcct 273
                |||| || ||||||||||||||||
Sbjct: 24766709 tgattaaggtcattccactttcct 24766686



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 70/77 (90%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                            
Query: 465      acctgtccctcggatgcgctcccaccaacatcaagataaattggcaggtgtaccaccatg 524
                ||||||||||| ||||| || ||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 24765491 acctgtccctctgatgcacttccaccaacatcaaga-aaattggcaggcgtacccccatg 24765433

                                 
Query: 525      cagcttaatgatgtcca 541
                || ||||||||||||||
Sbjct: 24765432 caacttaatgatgtcca 24765416



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                            
Query: 271      ccttaagaatccttttcccttggtctacattggtgccttctagccgaacaacaacaggga 330
                |||| |||||||| ||||||||||| |||||||||||||| | ||||||||||||||| |
Sbjct: 24766591 cctttagaatcctcttcccttggtcaacattggtgccttccaaccgaacaacaacaggca 24766532

                                
Query: 331      ccttaagatcaacctg 346
                |||| || ||||||||
Sbjct: 24766531 ccttcaggtcaacctg 24766516
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>dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1234_B11
          Length = 128095

 Score =  200 bits (101), Expect = 3e-48
 Identities = 122/129 (94%)
 Strand = Plus / Minus

                                                                         
Query: 341   aacctgtttagctgcattcactattccacttgctatcacatcacatttcatgatacctcc 400
             ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 65691 aacctgttttgctgcattcactattccacttgctatcacatcacatttcatgataccacc 65632

                                                                         
Query: 401   aaaaatgttaactagaattgccttcactctatcatctgaagtcaatatcttaaatgcttc 460
             ||||||||| |||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 65631 aaaaatgttcactagaatagccttcactctatcatcggaagtcaaaatcttaaatgcttc 65572

                      
Query: 461   cacgacctg 469
             ||| |||||
Sbjct: 65571 cacaacctg 65563



 Score =  111 bits (56), Expect = 2e-21
 Identities = 77/84 (91%)
 Strand = Plus / Minus

                                                                         
Query: 190   ttaatcatttgaccgatgcttttacagccttctcggcagcatcatcaagatcctctgcag 249
             ||||| ||||||| |||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 66417 ttaattatttgacagatgcttttacagctttctcagccgcatcatcaagatcctctgcag 66358

                                     
Query: 250   tgatcaatgtcattccactttcct 273
             |||| || ||||||||||||||||
Sbjct: 66357 tgattaaggtcattccactttcct 66334



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 70/77 (90%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                         
Query: 465   acctgtccctcggatgcgctcccaccaacatcaagataaattggcaggtgtaccaccatg 524
             ||||||||||| ||||| || ||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 65139 acctgtccctctgatgcacttccaccaacatcaaga-aaattggcaggcgtacccccatg 65081

                              
Query: 525   cagcttaatgatgtcca 541
             || ||||||||||||||
Sbjct: 65080 caacttaatgatgtcca 65064



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                         
Query: 271   ccttaagaatccttttcccttggtctacattggtgccttctagccgaacaacaacaggga 330
             |||| |||||||| ||||||||||| |||||||||||||| | ||||||||||||||| |
Sbjct: 66239 cctttagaatcctcttcccttggtcaacattggtgccttccaaccgaacaacaacaggca 66180

                             
Query: 331   ccttaagatcaacctg 346
             |||| || ||||||||
Sbjct: 66179 ccttcaggtcaacctg 66164
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>gb|DQ200398.1| Solanum tuberosum clone 071C05 succinyl-CoA ligase beta subunit-like
            protein mRNA, complete cds
          Length = 1550

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 125/151 (82%)
 Strand = Plus / Minus

                                                                        
Query: 259  tcattccactttccttaagaatccttttcccttggtctacattggtgccttctagccgaa 318
            |||| ||||||||||||||||| || |||||||| || || ||||| ||||| || ||||
Sbjct: 1212 tcatgccactttccttaagaattctcttcccttgttcgacgttggttccttccagacgaa 1153

                                                                        
Query: 319  caacaacagggaccttaagatcaacctgtttagctgcattcactattccacttgctatca 378
            |||  ||||| || || || | ||||||||| || ||||| || || ||||| |||||||
Sbjct: 1152 caatcacaggcactttcagttgaacctgtttggcagcattaacaataccactggctatca 1093

                                           
Query: 379  catcacatttcatgatacctccaaaaatgtt 409
            ||||||| ||||| || |||||||| |||||
Sbjct: 1092 catcacacttcattattcctccaaagatgtt 1062
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>gb|DQ294279.1| Solanum tuberosum clone 180E05 succinyl CoA ligase beta subunit-like
            protein mRNA, complete cds
          Length = 1388

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 125/151 (82%)
 Strand = Plus / Minus

                                                                        
Query: 259  tcattccactttccttaagaatccttttcccttggtctacattggtgccttctagccgaa 318
            |||| ||||||||||||||||| || |||||||| || || ||||| ||||| || ||||
Sbjct: 1208 tcatgccactttccttaagaattctcttcccttgttcgacgttggttccttccagacgaa 1149

                                                                        
Query: 319  caacaacagggaccttaagatcaacctgtttagctgcattcactattccacttgctatca 378
            |||  ||||| || || || | ||||||||| || ||||| || || ||||| |||||||
Sbjct: 1148 caatcacaggcactttcagttgaacctgtttggcagcattaacaataccactggctatca 1089

                                           
Query: 379  catcacatttcatgatacctccaaaaatgtt 409
            ||||||| ||||| || |||||||| |||||
Sbjct: 1088 catcacacttcattattcctccaaagatgtt 1058
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>gb|BT013785.1| Lycopersicon esculentum clone 132678F, mRNA sequence
          Length = 1491

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 123/151 (81%)
 Strand = Plus / Minus

                                                                        
Query: 259  tcattccactttccttaagaatccttttcccttggtctacattggtgccttctagccgaa 318
            |||| ||||||||||| ||||| || |||||||| || || ||||| ||||| || ||||
Sbjct: 1316 tcatgccactttccttgagaattctcttcccttgttcgacgttggttccttccagacgaa 1257

                                                                        
Query: 319  caacaacagggaccttaagatcaacctgtttagctgcattcactattccacttgctatca 378
            |||  ||||| || || || | |||||| || |||||||| || || ||||| |||||||
Sbjct: 1256 caatcacaggtactttcagttgaacctgcttggctgcattaacaataccactggctatca 1197

                                           
Query: 379  catcacatttcatgatacctccaaaaatgtt 409
            ||||||| ||||| || || ||||| |||||
Sbjct: 1196 catcacacttcattattccgccaaagatgtt 1166
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>gb|AY180975.1| Lycopersicon esculentum succinyl CoA ligase beta subunit mRNA,
            complete cds; nuclear gene for mitochondrial product
          Length = 1427

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 123/151 (81%)
 Strand = Plus / Minus

                                                                        
Query: 259  tcattccactttccttaagaatccttttcccttggtctacattggtgccttctagccgaa 318
            |||| ||||||||||| ||||| || |||||||| || || ||||| ||||| || ||||
Sbjct: 1205 tcatgccactttccttgagaattctcttcccttgttcgacgttggttccttccagacgaa 1146

                                                                        
Query: 319  caacaacagggaccttaagatcaacctgtttagctgcattcactattccacttgctatca 378
            |||  ||||| || || || | |||||| || |||||||| || || ||||| |||||||
Sbjct: 1145 caatcacaggtactttcagttgaacctgcttggctgcattaacaataccactggctatca 1086

                                           
Query: 379  catcacatttcatgatacctccaaaaatgtt 409
            ||||||| ||||| || || ||||| |||||
Sbjct: 1085 catcacacttcattattccgccaaagatgtt 1055
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>ref|NM_127601.2| Arabidopsis thaliana catalytic/ succinate-CoA ligase (GDP-forming)
            AT2G20420 mRNA, complete cds
          Length = 1632

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 357  ttcactattccacttgctatcacatcacatttcatgatacctccaaaaatgttaactaga 416
            ||||| |||||||| || ||||||||||||||||| || || ||||| ||||| || |  
Sbjct: 1221 ttcacgattccactagcaatcacatcacatttcattatcccaccaaatatgttcaccaag 1162

                                                                 
Query: 417  attgccttcactctatcatctgaagtcaatatcttaaatgcttccacgacctg 469
            ||||| |||||| |||| || || |||| ||||||||| |||||||| |||||
Sbjct: 1161 attgctttcactttatcgtccgatgtcagtatcttaaacgcttccaccacctg 1109
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>emb|AJ001808.1|ATSCLBS Arabidopsis thaliana mRNA for Succinyl-CoA-ligase beta subunit
          Length = 1546

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 357  ttcactattccacttgctatcacatcacatttcatgatacctccaaaaatgttaactaga 416
            ||||| |||||||| || ||||||||||||||||| || || ||||| ||||| || |  
Sbjct: 1187 ttcacgattccactagcaatcacatcacatttcattatcccaccaaatatgttcaccaag 1128

                                                                 
Query: 417  attgccttcactctatcatctgaagtcaatatcttaaatgcttccacgacctg 469
            ||||| |||||| |||| || || |||| ||||||||| |||||||| |||||
Sbjct: 1127 attgctttcactttatcgtccgatgtcagtatcttaaacgcttccaccacctg 1075
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>gb|AY128889.1| Arabidopsis thaliana succinyl-CoA ligase beta subunit (At2g20420)
            mRNA, complete cds
          Length = 1333

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 357  ttcactattccacttgctatcacatcacatttcatgatacctccaaaaatgttaactaga 416
            ||||| |||||||| || ||||||||||||||||| || || ||||| ||||| || |  
Sbjct: 1103 ttcacgattccactagcaatcacatcacatttcattatcccaccaaatatgttcaccaag 1044

                                                                 
Query: 417  attgccttcactctatcatctgaagtcaatatcttaaatgcttccacgacctg 469
            ||||| |||||| |||| || || |||| ||||||||| |||||||| |||||
Sbjct: 1043 attgctttcactttatcgtccgatgtcagtatcttaaacgcttccaccacctg 991
to top
>gb|AY099707.1| Arabidopsis thaliana succinyl-CoA ligase beta subunit (At2g20420)
            mRNA, complete cds
          Length = 1477

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 357  ttcactattccacttgctatcacatcacatttcatgatacctccaaaaatgttaactaga 416
            ||||| |||||||| || ||||||||||||||||| || || ||||| ||||| || |  
Sbjct: 1187 ttcacgattccactagcaatcacatcacatttcattatcccaccaaatatgttcaccaag 1128

                                                                 
Query: 417  attgccttcactctatcatctgaagtcaatatcttaaatgcttccacgacctg 469
            ||||| |||||| |||| || || |||| ||||||||| |||||||| |||||
Sbjct: 1127 attgctttcactttatcgtccgatgtcagtatcttaaacgcttccaccacctg 1075
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>dbj|AK221149.1| Arabidopsis thaliana mRNA for succinyl-CoA ligase beta subunit,
           partial cds, clone: RAFL22-94-A01
          Length = 802

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                       
Query: 357 ttcactattccacttgctatcacatcacatttcatgatacctccaaaaatgttaactaga 416
           ||||| |||||||| || ||||||||||||||||| || || ||||| ||||| || |  
Sbjct: 470 ttcacgattccactagcaatcacatcacatttcattatcccaccaaatatgttcaccaag 411

                                                                
Query: 417 attgccttcactctatcatctgaagtcaatatcttaaatgcttccacgacctg 469
           ||||| |||||| |||| || || |||| ||||||||| |||||||| |||||
Sbjct: 410 attgctttcactttatcgtccgatgtcagtatcttaaacgcttccaccacctg 358
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>gb|AY087596.1| Arabidopsis thaliana clone 36904 mRNA, complete sequence
          Length = 1511

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 357  ttcactattccacttgctatcacatcacatttcatgatacctccaaaaatgttaactaga 416
            ||||| |||||||| || ||||||||||||||||| || || ||||| ||||| || |  
Sbjct: 1221 ttcacgattccactagcaatcacatcacatttcattatcccaccaaatatgttcaccaag 1162

                                                                 
Query: 417  attgccttcactctatcatctgaagtcaatatcttaaatgcttccacgacctg 469
            ||||| |||||| |||| || || |||| ||||||||| |||||||| |||||
Sbjct: 1161 attgctttcactttatcgtccgatgtcagtatcttaaacgcttccaccacctg 1109
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>gb|AC007109.7| Arabidopsis thaliana chromosome 2 clone T13C7 map mi148, complete
            sequence
          Length = 52784

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 93/112 (83%)
 Strand = Plus / Minus

                                                                        
Query: 357  ttcactattccacttgctatcacatcacatttcatgatacctccaaaaatgttaactaga 416
            ||||| |||||||| || ||||||||||||||||| || || ||||| ||||| || |  
Sbjct: 1066 ttcacgattccactagcaatcacatcacatttcattatcccaccaaatatgttcaccaag 1007

                                                                
Query: 417  attgccttcactctatcatctgaagtcaatatcttaaatgcttccacgacct 468
            ||||| |||||| |||| || || |||| ||||||||| |||||||| ||||
Sbjct: 1006 attgctttcactttatcgtccgatgtcagtatcttaaacgcttccaccacct 955
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>gb|AC006569.5| Arabidopsis thaliana chromosome 2 clone F11A3 map mi148, complete
            sequence
          Length = 93868

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 93/112 (83%)
 Strand = Plus / Plus

                                                                        
Query: 357  ttcactattccacttgctatcacatcacatttcatgatacctccaaaaatgttaactaga 416
            ||||| |||||||| || ||||||||||||||||| || || ||||| ||||| || |  
Sbjct: 4157 ttcacgattccactagcaatcacatcacatttcattatcccaccaaatatgttcaccaag 4216

                                                                
Query: 417  attgccttcactctatcatctgaagtcaatatcttaaatgcttccacgacct 468
            ||||| |||||| |||| || || |||| ||||||||| |||||||| ||||
Sbjct: 4217 attgctttcactttatcgtccgatgtcagtatcttaaacgcttccaccacct 4268
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>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome
          Length = 4202352

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                  
Query: 378     acatcacatttcatgatacctccaaaaatgttaac 412
               |||||||||||||||||||| || |||||||||||
Sbjct: 2589388 acatcacatttcatgataccaccgaaaatgttaac 2589422
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>gb|BC056353.1| Mus musculus succinate-Coenzyme A ligase, ADP-forming, beta subunit,
            mRNA (cDNA clone MGC:73516 IMAGE:6808360), complete cds
          Length = 2124

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 378  acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
            ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 1170 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 1125
to top
>ref|NM_011506.1| Mus musculus succinate-Coenzyme A ligase, ADP-forming, beta subunit
            (Sucla2), mRNA
          Length = 2109

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 378  acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
            ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 1180 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 1135
to top
>gb|BC025014.1| Mus musculus, clone IMAGE:5360696, mRNA
          Length = 1230

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 378 acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
           ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 110 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 155
to top
>dbj|AK132762.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4922505G15 product:succinate-Coenzyme A
            ligase, ADP-forming, beta subunit, full insert sequence
          Length = 1598

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 378  acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
            ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 1169 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 1124
to top
>dbj|AK152783.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830086A06 product:succinate-Coenzyme A
            ligase, ADP-forming, beta subunit, full insert sequence
          Length = 2108

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 378  acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
            ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 1179 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 1134
to top
>dbj|AK150594.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830012I02 product:succinate-Coenzyme A
            ligase, ADP-forming, beta subunit, full insert sequence
          Length = 2108

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 378  acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
            ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 1179 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 1134
to top
>dbj|AK160130.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched
            library, clone:1500031A22 product:succinate-Coenzyme A
            ligase, ADP-forming, beta subunit, full insert sequence
          Length = 2109

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 378  acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
            ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 1180 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 1135
to top
>dbj|AK153198.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830127D03 product:succinate-Coenzyme A
            ligase, ADP-forming, beta subunit, full insert sequence
          Length = 2108

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 378  acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
            ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 1179 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 1134
to top
>dbj|AK160652.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2810420K11
            product:succinate-Coenzyme A ligase, ADP-forming, beta
            subunit, full insert sequence
          Length = 1600

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 378  acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
            ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 1168 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 1123
to top
>dbj|AK003867.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110020K11
           product:succinate-Coenzyme A ligase, ADP-forming, beta
           subunit, full insert sequence
          Length = 634

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 378 acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
           ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 64  acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 19
to top
>dbj|AK088801.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430026D03
            product:succinate-Coenzyme A ligase, ADP-forming, beta
            subunit, full insert sequence
          Length = 2109

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 378  acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
            ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 1180 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 1135
to top
>gb|BC038497.1| Mus musculus succinate-Coenzyme A ligase, ADP-forming, beta
           subunit, mRNA (cDNA clone IMAGE:4239805), partial cds
          Length = 1291

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 378 acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
           ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 347 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 302
to top
>dbj|AK005273.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched
            library, clone:1500017C15 product:succinate-Coenzyme A
            ligase, ADP-forming, beta subunit, full insert sequence
          Length = 1599

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 378  acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
            ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 1162 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 1117
to top
>gb|BC052774.1| Mus musculus succinate-Coenzyme A ligase, ADP-forming, beta
           subunit, mRNA (cDNA clone IMAGE:6465419), containing
           frame-shift errors
          Length = 1180

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 378 acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
           ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 711 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 666
to top
>dbj|AK081965.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130090E04 product:succinate-Coenzyme A
            ligase, ADP-forming, beta subunit, full insert sequence
          Length = 1546

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 378  acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
            ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 1200 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 1155
to top
>dbj|AK215074.1| Mus musculus cDNA, clone:Y2G0133O05, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000056616, based on BLAT search
          Length = 358

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 378 acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
           ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 295 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 250
to top
>gb|BC057605.1| Mus musculus succinate-Coenzyme A ligase, ADP-forming, beta subunit,
            mRNA (cDNA clone MGC:67262 IMAGE:6808360), complete cds
          Length = 2124

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 378  acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
            ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 1170 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 1125
to top
>gb|AC155246.1| Mus musculus BAC clone RP24-303C15 from 14, complete sequence
          Length = 151983

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                            
Query: 378    acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
              ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 101830 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 101875
to top
>gb|AF058955.1|AF058955 Mus musculus ATP-specific succinyl-CoA synthetase beta subunit (Scs)
            mRNA, partial cds
          Length = 1991

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 378  acatcacatttcatgatacctccaaaaatgttaactagaattgcct 423
            ||||||||| ||||||| |||||||||||||| || ||||| ||||
Sbjct: 1046 acatcacatctcatgattcctccaaaaatgttgaccagaatagcct 1001
to top
>ref|XM_640445.1| Dictyostelium discoideum ATP-specific succinyl-CoA synthetase subunit
            beta (DDB0231357), partial mRNA
          Length = 1338

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 378  acatcacatttcatgatacctccaaaaatgttaactagaattg 420
            |||||||||||||||||||| || ||||| || |||| |||||
Sbjct: 1103 acatcacatttcatgataccaccgaaaatattgactaaaattg 1061
to top
>emb|X84222.2|NFBSCOAS Neocallimastix frontalis mRNA for beta-succinyl CoA synthetase
            precursor
          Length = 1449

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 380  atcacatttcatgatacctccaaaaatgttaactagaat 418
            ||||||| |||||||||| || ||||||||||| |||||
Sbjct: 1143 atcacatctcatgataccaccgaaaatgttaacaagaat 1105
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>gb|AC115594.2| Dictyostelium discoideum chromosome 2 map 4071862-4101005 strain AX4,
             complete sequence
          Length = 29143

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 378   acatcacatttcatgatacctccaaaaatgttaactagaattg 420
             |||||||||||||||||||| || ||||| || |||| |||||
Sbjct: 19204 acatcacatttcatgataccaccgaaaatattgactaaaattg 19162
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>ref|XM_639091.1| Dictyostelium discoideum GTP-specific succinyl-CoA synthetase beta
            subunit (DDB0231358), partial mRNA
          Length = 1263

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 380  atcacatttcatgatacctccaaaaatgtt 409
            |||||||||||||||||| || ||||||||
Sbjct: 1077 atcacatttcatgataccaccgaaaatgtt 1048
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>gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4,
             complete sequence
          Length = 405682

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 380   atcacatttcatgatacctccaaaaatgtt 409
             |||||||||||||||||| || ||||||||
Sbjct: 82914 atcacatttcatgataccaccgaaaatgtt 82885
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>gb|AF493055.1| Neocallimastix patriciarum succinyl-CoA synthetase, beta subunit
            (scsB) mRNA, complete cds
          Length = 1555

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 380  atcacatttcatgatacctccaaaaatgttaac 412
            ||||||| |||||||||| || |||||||||||
Sbjct: 1177 atcacatctcatgataccaccgaaaatgttaac 1145
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>gb|AF332093.1|AF332093 White spot syndrome virus, complete genome
          Length = 305107

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 215    agccttctcggcagcatcatc 235
              |||||||||||||||||||||
Sbjct: 199002 agccttctcggcagcatcatc 199022
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>gb|AC114785.5| Homo sapiens BAC clone RP11-607G14 from 2, complete sequence
          Length = 118022

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 270   tccttaagaatccttttccct 290
             |||||||||||||||||||||
Sbjct: 81665 tccttaagaatccttttccct 81685
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>gb|AF369029.2| White spot syndrome virus, complete genome
          Length = 292967

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 215    agccttctcggcagcatcatc 235
              |||||||||||||||||||||
Sbjct: 248051 agccttctcggcagcatcatc 248071
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>gb|AF440570.1| Shrimp white spot syndrome virus, complete genome
          Length = 307287

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 215    agccttctcggcagcatcatc 235
              |||||||||||||||||||||
Sbjct: 232610 agccttctcggcagcatcatc 232630
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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
              genome
          Length = 3397754

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 392    gatacctccaaaaatgttaactagaatt 419
              |||||| |||||||| ||||||||||||
Sbjct: 577541 gataccaccaaaaatattaactagaatt 577514
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 246     gcagtgatcaatgtcattcc 265
               ||||||||||||||||||||
Sbjct: 5882709 gcagtgatcaatgtcattcc 5882728
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>ref|XM_847251.1| PREDICTED: Canis familiaris hypothetical protein LOC609902
            (LOC609902), mRNA
          Length = 1865

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 400  caaaaatgttaactagaatt 419
            ||||||||||||||||||||
Sbjct: 1193 caaaaatgttaactagaatt 1174
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>ref|XM_729265.1| Plasmodium chabaudi chabaudi hypothetical protein (PC300490.00.0)
           partial mRNA
          Length = 342

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 345 tgtttagctgcattcactattccacttgctatcacatcacatttcatgatacctcc 400
           |||||||||||||| | |||||| | ||| || | ||||||| |||| ||||||||
Sbjct: 149 tgtttagctgcatttattattccccgtgcaataatatcacatctcataatacctcc 94
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>ref|XM_740130.1| Plasmodium chabaudi chabaudi ATP-specific succinyl-CoA synthetase
           beta subunit (PC001331.02.0) partial mRNA
          Length = 1017

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 345 tgtttagctgcattcactattccacttgctatcacatcacatttcatgatacctcc 400
           |||||||||||||| | |||||| | ||| || | ||||||| |||| ||||||||
Sbjct: 824 tgtttagctgcatttattattccccgtgcaataatatcacatctcataatacctcc 769
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>gb|AC005521.1| Homo sapiens PAC clone RP5-1106E3 from 7, complete sequence
          Length = 136495

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    aaaaatgttaactagaattg 420
              ||||||||||||||||||||
Sbjct: 124968 aaaaatgttaactagaattg 124987
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>ref|XM_855542.1| PREDICTED: Canis familiaris hypothetical protein LOC608277,
            transcript variant 2 (LOC608277), mRNA
          Length = 1791

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 400  caaaaatgttaactagaatt 419
            ||||||||||||||||||||
Sbjct: 1159 caaaaatgttaactagaatt 1140
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>ref|XM_844983.1| PREDICTED: Canis familiaris hypothetical protein LOC608277,
            transcript variant 1 (LOC608277), mRNA
          Length = 1756

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 400  caaaaatgttaactagaatt 419
            ||||||||||||||||||||
Sbjct: 1124 caaaaatgttaactagaatt 1105
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>emb|CR769786.9| Zebrafish DNA sequence from clone DKEY-256I5 in linkage group 3,
             complete sequence
          Length = 91701

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   tcatttgaccgatgctttta 213
             ||||||||||||||||||||
Sbjct: 14553 tcatttgaccgatgctttta 14534
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>emb|AL133515.9| Human DNA sequence from clone GS1-153O3 on chromosome 1 Contains part
             of the gene for hemicentin, complete sequence
          Length = 47170

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 491   aacatcaagataaattggca 510
             ||||||||||||||||||||
Sbjct: 25335 aacatcaagataaattggca 25316
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>emb|AL034545.2|HS542O23 Human DNA sequence from clone RP4-542O23 on chromosome Xq21.1-21.33,
             complete sequence
          Length = 76277

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   aaaacagaactttagactga 175
             ||||||||||||||||||||
Sbjct: 41232 aaaacagaactttagactga 41213
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>emb|BX842656.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 11/11
          Length = 307337

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 381    tcacatttcatgatacctccaaaaatgttaac 412
              ||||||||||||||||| || || ||||||||
Sbjct: 201154 tcacatttcatgataccaccgaagatgttaac 201123
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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                       
Query: 306     ccttctagccgaacaacaacagggaccttaagatcaacct 345
               |||||||  |||||||||||||| ||||||| | ||||||
Sbjct: 2686654 ccttctaaacgaacaacaacaggaaccttaacaccaacct 2686693
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 378     acatcacatttcatgatacctccaaaaatgtt 409
               ||||||||||||||||| || || ||||||||
Sbjct: 1723712 acatcacatttcatgattccaccgaaaatgtt 1723743
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>emb|BX005210.10| Zebrafish DNA sequence from clone DKEY-222F8 in linkage group 4, complete
              sequence
          Length = 207949

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    gatcctctgcagtgatcaat 257
              ||||||||||||||||||||
Sbjct: 180116 gatcctctgcagtgatcaat 180097
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>emb|AL928936.9| Zebrafish DNA sequence from clone CH211-133H2 in linkage group 4,
             complete sequence
          Length = 157706

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   gatcctctgcagtgatcaat 257
             ||||||||||||||||||||
Sbjct: 10570 gatcctctgcagtgatcaat 10551
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>gb|AF061021.1|AF061021 Spirogyra sp. SVCK-253 actin mRNA, partial cds
          Length = 1094

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 cacatcacatttcatgatac 396
           ||||||||||||||||||||
Sbjct: 831 cacatcacatttcatgatac 812
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>emb|AL731682.20| Mouse DNA sequence from clone RP23-123F7 on chromosome 2, complete
              sequence
          Length = 201290

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    agtaagagagcaccactcct 143
              ||||||||||||||||||||
Sbjct: 170158 agtaagagagcaccactcct 170177


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,518,871
Number of Sequences: 3902068
Number of extensions: 4518871
Number of successful extensions: 83483
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83244
Number of HSP's gapped (non-prelim): 230
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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