Clone Information

BLAST Search Result

Clone Name	rbags32h01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL72_ARATH (P60039) 60S ribosomal protein L7-2	253	3e-67
2	RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3	252	5e-67
3	RL71_ARATH (P60040) 60S ribosomal protein L7-1	251	1e-66
4	RL7_HUMAN (P18124) 60S ribosomal protein L7	219	5e-57
5	RL7_BOVIN (Q58DT1) 60S ribosomal protein L7	219	5e-57
6	RL7_MOUSE (P14148) 60S ribosomal protein L7	218	8e-57
7	RL7_RAT (P05426) 60S ribosomal protein L7	218	1e-56
8	RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7	206	3e-53
9	RL7_CAEEL (O01802) 60S ribosomal protein L7	205	7e-53
10	RL7_DROME (P32100) 60S ribosomal protein L7	199	7e-51
11	RL7_YARLI (Q6C603) 60S ribosomal protein L7	199	7e-51
12	RL7_ASHGO (Q755A7) 60S ribosomal protein L7	194	2e-49
13	RL7_DICDI (P11874) 60S ribosomal protein L7	192	5e-49
14	RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)	192	8e-49
15	RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)	192	8e-49
16	RL7C_SCHPO (O60143) 60S ribosomal protein L7-C	189	5e-48
17	RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7	187	2e-47
18	RL7B_SCHPO (P25457) 60S ribosomal protein L7-B	186	4e-47
19	RL7_CANGA (Q6FSN6) 60S ribosomal protein L7	186	6e-47
20	RL7A_SCHPO (P17937) 60S ribosomal protein L7-A	161	2e-39
21	RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1	138	1e-32
22	RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1	138	1e-32
23	RLP7_YEAST (P40693) Ribosome biogenesis protein RLP7 (Ribosomal ...	97	4e-20
24	RLP7_CANGA (Q6FS36) Ribosome biogenesis protein RLP7	93	7e-19
25	RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7	92	1e-18
26	RL7_ENCCU (Q8SS93) 60S ribosomal protein L7	91	3e-18
27	RLP7_ASHGO (Q75ET5) Ribosome biogenesis protein RLP7	88	2e-17
28	RLP7_DEBHA (Q6BIF5) Ribosome biogenesis protein RLP7	88	2e-17
29	RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment)	86	1e-16
30	RL30_PYRHO (O59440) 50S ribosomal protein L30P	46	7e-05
31	RL30_PYRFU (Q9HH78) 50S ribosomal protein L30P (PfL30)	46	9e-05
32	RL30_AERPE (Q9YF96) 50S ribosomal protein L30P	38	0.019
33	RL30_SULSO (Q9UX86) 50S ribosomal protein L30P	38	0.025
34	HCP_SALTY (Q8ZQE8) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-...	30	0.027
35	HCP_SALTI (Q8Z829) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-...	30	0.027
36	RL30_ARCFU (O28375) 50S ribosomal protein L30P	37	0.043
37	RL30_METJA (P54046) 50S ribosomal protein L30P	37	0.056
38	RL30_SULAC (O05642) 50S ribosomal protein L30P	35	0.13
39	RL30_METVA (P14035) 50S ribosomal protein L30P	35	0.16
40	RL30_METTH (O26132) 50S ribosomal protein L30P	35	0.16
41	MUKF_PASMU (Q9CN38) Chromosome partition protein mukF	32	1.1
42	MUTH_YERPE (Q8ZHU5) DNA mismatch repair protein mutH (Methyl-dir...	31	2.4
43	DPOL_NPVLD (P30318) DNA polymerase (EC 2.7.7.7)	31	3.1
44	AX22B_PHAAU (P32294) Auxin-induced protein 22B (Indole-3-acetic ...	31	3.1
45	HCP_SHIFL (Q83S05) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-...	30	5.3
46	END3_SYNY3 (P73715) Endonuclease III (EC 4.2.99.18) (DNA-(apurin...	30	5.3
47	HCP_ECOLI (P75825) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-...	30	5.3
48	HCP_ECOL6 (Q8FJE0) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-...	30	5.3
49	HCP_ECO57 (Q8X6L0) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-...	30	5.3
50	AX22D_PHAAU (O24542) Auxin-induced protein 22D (Indole-3-acetic ...	30	6.9
51	YR33_THEPE (P15889) Hypothetical 33.4 kDa protein in ribosomal R...	30	6.9
52	NUD17_HUMAN (P0C025) Putative nucleoside diphosphate-linked moie...	30	6.9
53	Y1618_HAEIN (P45275) Hypothetical ABC transporter ATP-binding pr...	30	6.9
54	HCP_YERPE (Q8ZGE1) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-...	30	6.9
55	NU5M_STRPU (P15552) NADH-ubiquinone oxidoreductase chain 5 (EC 1...	29	9.0
56	GOGA4_HUMAN (Q13439) Golgin subfamily A member 4 (Trans-Golgi p2...	29	9.0
57	P3C2G_MOUSE (O70167) Phosphatidylinositol-4-phosphate 3-kinase C...	29	9.0
58	MUTH_PHOLL (Q7N124) DNA mismatch repair protein mutH (Methyl-dir...	29	9.0

>RL72_ARATH (P60039) 60S ribosomal protein L7-2|
          Length = 242

 Score =  253 bits (646), Expect = 3e-67
 Identities = 119/152 (78%), Positives = 134/152 (88%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GINA+ PKTKKILQLLRLRQIFNGVFLKVNKAT+NMLRRVEPYV YGYPNLKSV+ELIYK
Sbjct: 91  GINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYK 150

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RGYGKLN QRI LT+N ++++ LGKH IIC+ED++HEI+TVGPHFKEANNFLWPF     
Sbjct: 151 RGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAP 210

Query: 232 XXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 137
                 KRNHYVEGGDAGNRE++IN+LVRRMN
Sbjct: 211 LGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242

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>RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3|
          Length = 244

 Score =  252 bits (644), Expect = 5e-67
 Identities = 119/152 (78%), Positives = 134/152 (88%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GINA+ PKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYV YGYPNLKSV+ELIYK
Sbjct: 93  GINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYK 152

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RG+GKLN QR  LT+N ++++GLGKH IIC+ED++HEI+TVGPHFKEANNFLWPF     
Sbjct: 153 RGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAP 212

Query: 232 XXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 137
                 KRNHYVEGGDAGNRE++IN+LVRRMN
Sbjct: 213 LGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

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>RL71_ARATH (P60040) 60S ribosomal protein L7-1|
          Length = 242

 Score =  251 bits (640), Expect = 1e-66
 Identities = 119/152 (78%), Positives = 133/152 (87%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GINA+ PKTKKILQLLRLRQIFNGVFLKVNKAT+NMLRRVEPYV YG+PNLKSV+ELIYK
Sbjct: 91  GINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYK 150

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RGYGKLN QRI LT+N ++E+ LGKH IIC ED++HEILTVGPHFKEANNFLWPF     
Sbjct: 151 RGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLWPFQLKAP 210

Query: 232 XXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 137
                 KRNHYVEGGDAGNRE++IN+L+RRMN
Sbjct: 211 LGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242

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>RL7_HUMAN (P18124) 60S ribosomal protein L7|
          Length = 248

 Score =  219 bits (558), Expect = 5e-57
 Identities = 104/152 (68%), Positives = 123/152 (80%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GIN + PK +K+LQLLRLRQIFNG F+K+NKA+INMLR VEPY+A+GYPNLKSV ELIYK
Sbjct: 97  GINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYK 156

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RGYGK+NK+RI LT+N +I   LGK+ IIC+ED++HEI TVG  FKEANNFLWPF     
Sbjct: 157 RGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSP 216

Query: 232 XXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 137
                 K  H+VEGGDAGNRED IN+L+RRMN
Sbjct: 217 RGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248

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>RL7_BOVIN (Q58DT1) 60S ribosomal protein L7|
          Length = 248

 Score =  219 bits (558), Expect = 5e-57
 Identities = 104/152 (68%), Positives = 123/152 (80%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GIN + PK +K+LQLLRLRQIFNG F+K+NKA+INMLR VEPY+A+GYPNLKSV ELIYK
Sbjct: 97  GINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYK 156

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RGYGK+NK+RI LT+N +I   LGK+ IIC+ED++HEI TVG  FKEANNFLWPF     
Sbjct: 157 RGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSP 216

Query: 232 XXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 137
                 K  H+VEGGDAGNRED IN+L+RRMN
Sbjct: 217 RGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248

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>RL7_MOUSE (P14148) 60S ribosomal protein L7|
          Length = 270

 Score =  218 bits (556), Expect = 8e-57
 Identities = 104/152 (68%), Positives = 122/152 (80%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GIN + PK +K+LQLLRLRQIFNG F+K+NKA+INMLR VEPY+A+GYPNLKSV ELIYK
Sbjct: 119 GINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYK 178

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RGYGK+NK+RI LT+N +I   LGK  IIC+ED++HEI TVG  FKEANNFLWPF     
Sbjct: 179 RGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSP 238

Query: 232 XXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 137
                 K  H+VEGGDAGNRED IN+L+RRMN
Sbjct: 239 RGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 270

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>RL7_RAT (P05426) 60S ribosomal protein L7|
          Length = 260

 Score =  218 bits (554), Expect = 1e-56
 Identities = 102/152 (67%), Positives = 122/152 (80%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GIN + PK +K+LQLLRLRQIFNG F+K+NKA++NMLR VEPY+A+GYPNLKSV ELIYK
Sbjct: 109 GINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYIAWGYPNLKSVNELIYK 168

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RGYGK+NK+RI LT+N ++   LGK  IIC+ED++HEI TVG  FKEANNFLWPF     
Sbjct: 169 RGYGKINKKRIALTDNSLVARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSP 228

Query: 232 XXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 137
                 K  H+VEGGDAGNRED IN+L+RRMN
Sbjct: 229 RGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 260

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>RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7|
          Length = 248

 Score =  206 bits (525), Expect = 3e-53
 Identities = 97/153 (63%), Positives = 124/153 (81%), Gaps = 1/153 (0%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GIN + PK +KILQLLRL QI NGVF++V KAT  M++ VEP+VAYGYPNLKSV+ELIYK
Sbjct: 96  GINKIPPKPRKILQLLRLLQINNGVFVRVTKATAEMIKIVEPWVAYGYPNLKSVKELIYK 155

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RGYGK+NKQR+ LT+N +IEE LGK+ IIC+ED++HEI TVGP+FK+A+NFLWPF     
Sbjct: 156 RGYGKVNKQRVALTDNSIIEENLGKYGIICMEDLIHEIYTVGPNFKQASNFLWPFKLSNP 215

Query: 232 XXXXXXKR-NHYVEGGDAGNREDYINQLVRRMN 137
                 ++  H++EGGD GNRE++IN L+R+MN
Sbjct: 216 TGGFRTRKFKHFIEGGDLGNREEHINALIRQMN 248

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>RL7_CAEEL (O01802) 60S ribosomal protein L7|
          Length = 244

 Score =  205 bits (522), Expect = 7e-53
 Identities = 93/151 (61%), Positives = 119/151 (78%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GIN +HPK +K LQ+LRLRQI NGVF+K+NKAT+ +LR +EPYVA+GYPN K++ +L+YK
Sbjct: 93  GINQLHPKPRKALQILRLRQINNGVFVKLNKATLPLLRIIEPYVAWGYPNNKTIHDLLYK 152

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RGY K++  R+P+T+N ++E+ LGK NIIC+ED+ HEI TVGPHFKEA NFLWPF     
Sbjct: 153 RGYAKVDGNRVPITDNTIVEQSLGKFNIICLEDLAHEIATVGPHFKEATNFLWPFKLNNP 212

Query: 232 XXXXXXKRNHYVEGGDAGNREDYINQLVRRM 140
                 K NH+VEGGD GNRED IN L+R+M
Sbjct: 213 TGGWTKKTNHFVEGGDFGNREDQINNLLRKM 243

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>RL7_DROME (P32100) 60S ribosomal protein L7|
          Length = 252

 Score =  199 bits (505), Expect = 7e-51
 Identities = 98/152 (64%), Positives = 118/152 (77%), Gaps = 1/152 (0%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GIN + PK +K+LQL RLRQI NGVF+K+NKATINMLR  EPY+ +GYPNLKSVRELIYK
Sbjct: 100 GINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYK 159

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGK-HNIICIEDVVHEILTVGPHFKEANNFLWPFXXXX 236
           RG+ K N+QR+P+T+N VIE  L + H I C+ED+VHEI TVGP+FK A+NFLWPF    
Sbjct: 160 RGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNFKYASNFLWPFKLNT 219

Query: 235 XXXXXXXKRNHYVEGGDAGNREDYINQLVRRM 140
                  K NHYV GGD GNRED IN+L+R+M
Sbjct: 220 PTGGWRKKANHYVNGGDFGNREDQINRLLRKM 251

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>RL7_YARLI (Q6C603) 60S ribosomal protein L7|
          Length = 250

 Score =  199 bits (505), Expect = 7e-51
 Identities = 93/154 (60%), Positives = 119/154 (77%), Gaps = 2/154 (1%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GI+ M PK +K+LQLLRL QI NGVF+++ KAT  +LR VEPY+A+GYPNL SVR+L+YK
Sbjct: 97  GISKMAPKPRKVLQLLRLHQINNGVFVRITKATAELLRIVEPYIAFGYPNLASVRQLVYK 156

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RGYGK+NKQRIPL++N +IEE LGK+ IIC+ED++HEI TVGP FK+A+NFLWPF     
Sbjct: 157 RGYGKVNKQRIPLSDNAIIEEALGKYGIICMEDLIHEIYTVGPAFKQASNFLWPFKLSNP 216

Query: 232 XXXXXXKR--NHYVEGGDAGNREDYINQLVRRMN 137
                 +R   HY+EGG  GNRE+ IN L++  N
Sbjct: 217 SGGWGVRRKFKHYIEGGSTGNREENINALIKAQN 250

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>RL7_ASHGO (Q755A7) 60S ribosomal protein L7|
          Length = 243

 Score =  194 bits (492), Expect = 2e-49
 Identities = 89/154 (57%), Positives = 118/154 (76%), Gaps = 2/154 (1%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GIN + PK +K+LQLLRL QI +GVF+KV KAT  +LR VEPYVAYGYP+  ++R+L+YK
Sbjct: 90  GINKIAPKPRKVLQLLRLNQINSGVFVKVTKATTELLRLVEPYVAYGYPSYSTIRQLVYK 149

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RGYGK+NKQRI L+ N ++E  LGK+ II ++D++HEI+TVGPHFK+ANNFLWPF     
Sbjct: 150 RGYGKINKQRIALSENSIVEANLGKYGIISVDDLIHEIITVGPHFKQANNFLWPFKLSNP 209

Query: 232 XXXXXXKR--NHYVEGGDAGNREDYINQLVRRMN 137
                  R   H+++GG  GNRE++IN+LV+ MN
Sbjct: 210 SGGWGVPRKFKHFIQGGAFGNREEFINKLVKSMN 243

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>RL7_DICDI (P11874) 60S ribosomal protein L7|
          Length = 245

 Score =  192 bits (489), Expect = 5e-49
 Identities = 90/152 (59%), Positives = 118/152 (77%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GIN + PK +K+L+LLRL Q+ NGVF+K+NKA+INML+ VEPYVAYG+PNLKS++ELIYK
Sbjct: 94  GINGVSPKPRKVLKLLRLLQLNNGVFVKLNKASINMLKLVEPYVAYGFPNLKSIKELIYK 153

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RG+ K++ QRIPLT+N ++E+ LGK  IIC+ED++HEI T G HFK+ NN LWPF     
Sbjct: 154 RGHLKIDGQRIPLTSNDMVEKQLGKFGIICVEDIIHEITTCGKHFKQVNNSLWPFKLNCP 213

Query: 232 XXXXXXKRNHYVEGGDAGNREDYINQLVRRMN 137
                 K+  +++GGDAGNRE  IN L+ RMN
Sbjct: 214 RGGFNMKKTPFLQGGDAGNREHLINNLIHRMN 245

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>RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)|
          Length = 243

 Score =  192 bits (487), Expect = 8e-49
 Identities = 85/154 (55%), Positives = 120/154 (77%), Gaps = 2/154 (1%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GIN + PK +K+LQLLRL +I +G F+KV KAT+ +L+ +EPYVAYGYP+  ++R+L+YK
Sbjct: 90  GINKIPPKPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYK 149

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RG+GK+NKQR+PL++N +IE  LGK+ I+ I+D++HEI+TVGPHFK+ANNFLWPF     
Sbjct: 150 RGFGKINKQRVPLSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQANNFLWPFKLSNP 209

Query: 232 XXXXXXKR--NHYVEGGDAGNREDYINQLVRRMN 137
                  R   H+++GG  GNRE++IN+LV+ MN
Sbjct: 210 SGGWGVPRKFKHFIQGGSFGNREEFINKLVKAMN 243

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>RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)|
          Length = 243

 Score =  192 bits (487), Expect = 8e-49
 Identities = 85/154 (55%), Positives = 120/154 (77%), Gaps = 2/154 (1%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GIN + PK +K+LQLLRL +I +G F+KV KAT+ +L+ +EPYVAYGYP+  ++R+L+YK
Sbjct: 90  GINKIPPKPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYK 149

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RG+GK+NKQR+PL++N +IE  LGK+ I+ I+D++HEI+TVGPHFK+ANNFLWPF     
Sbjct: 150 RGFGKINKQRVPLSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQANNFLWPFKLSNP 209

Query: 232 XXXXXXKR--NHYVEGGDAGNREDYINQLVRRMN 137
                  R   H+++GG  GNRE++IN+LV+ MN
Sbjct: 210 SGGWGVPRKFKHFIQGGSFGNREEFINKLVKSMN 243

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>RL7C_SCHPO (O60143) 60S ribosomal protein L7-C|
          Length = 251

 Score =  189 bits (480), Expect = 5e-48
 Identities = 91/152 (59%), Positives = 119/152 (78%), Gaps = 1/152 (0%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GIN + PK +KI+QLLRL QI NGVF+K NKAT  ML+ VEPYV YG PNLK+VREL+YK
Sbjct: 99  GINNIPPKARKIMQLLRLIQINNGVFVKFNKATKEMLQVVEPYVTYGIPNLKTVRELLYK 158

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RG+GK+NKQRI L++N +IE  LGK++I+ IED++HEI TVGP+FK+A NF+WPF     
Sbjct: 159 RGFGKVNKQRIALSDNAIIEAALGKYSILSIEDLIHEIYTVGPNFKQAANFIWPFQLSSP 218

Query: 232 XXXXXXKR-NHYVEGGDAGNREDYINQLVRRM 140
                 ++  H++EGGDAG R+++IN LVR+M
Sbjct: 219 LGGWRDRKFKHFIEGGDAGKRDEHINSLVRKM 250

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>RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7|
          Length = 241

 Score =  187 bits (476), Expect = 2e-47
 Identities = 86/153 (56%), Positives = 118/153 (77%), Gaps = 1/153 (0%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GIN + PK +K+LQLLRL QI  GVF+++ KAT  +L+  EPY+AYGYPNL ++R L+YK
Sbjct: 89  GINKIAPKPRKVLQLLRLTQINAGVFVRLTKATSELLKLAEPYIAYGYPNLSTIRHLVYK 148

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RG+GK+NKQRI L++N +IE  LGK+ I+ IED++HEI TVGP+FK+ANNFLWPF     
Sbjct: 149 RGHGKINKQRIALSDNAIIEANLGKYGILSIEDLIHEIYTVGPNFKQANNFLWPFKLSNP 208

Query: 232 XXXXXXKR-NHYVEGGDAGNREDYINQLVRRMN 137
                 ++  H+++GGD GNRE++IN LV++MN
Sbjct: 209 NGGFRTRKFFHFIQGGDTGNREEFINALVKQMN 241

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>RL7B_SCHPO (P25457) 60S ribosomal protein L7-B|
          Length = 250

 Score =  186 bits (472), Expect = 4e-47
 Identities = 89/152 (58%), Positives = 118/152 (77%), Gaps = 1/152 (0%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GIN + PK +KI+QLLRL QI NG+F+K NKA   ML+ VEPYV YG PN K+VRELIYK
Sbjct: 98  GINNIPPKARKIMQLLRLLQINNGIFVKFNKAIKEMLQVVEPYVTYGIPNHKTVRELIYK 157

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RG+GK+NKQRIPL++N +IE  LGK++I+ +ED++HEI TVGP+FK+A NFLWPF     
Sbjct: 158 RGFGKVNKQRIPLSDNAIIEAALGKYSILSVEDLIHEIYTVGPNFKQAANFLWPFKLSSP 217

Query: 232 XXXXXXKR-NHYVEGGDAGNREDYINQLVRRM 140
                 ++  H++EGGDAG R+++IN LV++M
Sbjct: 218 LGGWRERKFKHFIEGGDAGKRDEHINGLVQKM 249

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>RL7_CANGA (Q6FSN6) 60S ribosomal protein L7|
          Length = 244

 Score =  186 bits (471), Expect = 6e-47
 Identities = 86/154 (55%), Positives = 116/154 (75%), Gaps = 2/154 (1%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           GIN + PK +K+LQLLRL QI +G F+KV KAT  +L+ +EPYVAYGYP+  +VR+L+YK
Sbjct: 91  GINKIPPKPRKVLQLLRLTQINSGTFVKVTKATSELLKLIEPYVAYGYPSYSTVRQLVYK 150

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RG+GK+NKQRI L++N ++E  LGK  I+ I+D++HEI+TVGPHFK+ANNFLWPF     
Sbjct: 151 RGHGKINKQRIALSDNAIVEANLGKFGILSIDDLIHEIVTVGPHFKQANNFLWPFKLSNP 210

Query: 232 XXXXXXKR--NHYVEGGDAGNREDYINQLVRRMN 137
                  R   H+++GG  GNRE +IN+LV+ MN
Sbjct: 211 SGGWGVPRKFKHFIQGGAFGNREQFINKLVKAMN 244

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>RL7A_SCHPO (P17937) 60S ribosomal protein L7-A|
          Length = 249

 Score =  161 bits (407), Expect = 2e-39
 Identities = 81/151 (53%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
 Frame = -2

Query: 592 GINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYK 413
           G+  M PK +K+L+LLRL +I N VF++ NKA   MLR VEPYV YG PNL SVRELIYK
Sbjct: 97  GVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRELIYK 156

Query: 412 RGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXX 233
           RG+GK+N QRI L++N +IEE LGK+++I IED++HEI  VG HFKE   FLWPF     
Sbjct: 157 RGFGKINGQRIALSDNALIEEALGKYDVISIEDIIHEIYNVGSHFKEVTKFLWPFTLTPV 216

Query: 232 XXXXXXKR-NHYVEGGDAGNREDYINQLVRR 143
                 K+  H+ EG  AG   + IN+L+++
Sbjct: 217 KHSLMEKKVKHFNEGRKAGYCGEEINELIKK 247

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>RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1|
          Length = 246

 Score =  138 bits (348), Expect = 1e-32
 Identities = 70/143 (48%), Positives = 94/143 (65%)
 Frame = -2

Query: 565 KKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 386
           ++ +  LRL++IF+GVF+KV    + MLR VEPYV +G+PNLKSVRELI KRG  K+  +
Sbjct: 104 QRTIARLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNK 163

Query: 385 RIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRN 206
            IPLT+N VIEE LGK  +IC+ED++HEI   G HF+E + FL PF           +  
Sbjct: 164 TIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLCPFHLSVARHATKNRVG 223

Query: 205 HYVEGGDAGNREDYINQLVRRMN 137
              E G  G R + INQL+R++N
Sbjct: 224 FLKEMGTPGYRGERINQLIRQLN 246

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>RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1|
          Length = 246

 Score =  138 bits (347), Expect = 1e-32
 Identities = 70/143 (48%), Positives = 94/143 (65%)
 Frame = -2

Query: 565 KKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 386
           ++ +  LRL++IF+GVF+KV    + MLR VEPYV +G+PNLKSVRELI KRG  K+  +
Sbjct: 104 QRTIARLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNK 163

Query: 385 RIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRN 206
            IPLT+N VIEE LGK  +IC+ED++HEI   G HF+E + FL PF           +  
Sbjct: 164 TIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLRPFHLSVARHATKNRVG 223

Query: 205 HYVEGGDAGNREDYINQLVRRMN 137
              E G  G R + INQL+R++N
Sbjct: 224 FLKEMGTPGYRGERINQLIRQLN 246

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>RLP7_YEAST (P40693) Ribosome biogenesis protein RLP7 (Ribosomal protein|
           L7-like)
          Length = 322

 Score = 97.1 bits (240), Expect = 4e-20
 Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 6/114 (5%)
 Frame = -2

Query: 571 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGY---- 404
           K  KIL LLRL +   GVF+K+ K    +L+ + PYV  G P+L S+R LI KRG     
Sbjct: 158 KAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQKRGRIIYK 217

Query: 403 --GKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPF 248
              +     I L +N ++EE LG H IIC+ED++HEI T+G  F   N FL PF
Sbjct: 218 GENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESFSVCNFFLQPF 271

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>RLP7_CANGA (Q6FS36) Ribosome biogenesis protein RLP7|
          Length = 317

 Score = 92.8 bits (229), Expect = 7e-19
 Identities = 47/114 (41%), Positives = 73/114 (64%), Gaps = 6/114 (5%)
 Frame = -2

Query: 571 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRG---YG 401
           K  +IL  LRL ++   VF+K+ + T ++L+ + PYV  G P+LKS+R LI KR    Y 
Sbjct: 153 KAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVGKPSLKSIRSLIQKRSKIVYK 212

Query: 400 KLNKQR---IPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPF 248
           + +++    I L +N ++EE LG   +ICI+D++HEI T+G +F + N FL PF
Sbjct: 213 REDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIHEIATLGENFTKCNFFLQPF 266

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>RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7|
          Length = 318

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 6/114 (5%)
 Frame = -2

Query: 571 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLN 392
           K  K+L LLRL ++  GVF+K+ K    +L+ V PY+  G P+L S+R LI KR      
Sbjct: 154 KAYKVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKRSRIMWQ 213

Query: 391 K------QRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPF 248
           +      + I L +N ++EE LG   +ICIED++HEI T+G +F +   FL PF
Sbjct: 214 RPEDKEPKEIILNDNNIVEEKLGDEGVICIEDIIHEISTLGENFSKCTFFLLPF 267

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>RL7_ENCCU (Q8SS93) 60S ribosomal protein L7|
          Length = 239

 Score = 90.9 bits (224), Expect = 3e-18
 Identities = 50/146 (34%), Positives = 87/146 (59%), Gaps = 1/146 (0%)
 Frame = -2

Query: 574 PKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKL 395
           PK +K+L+L RL++I   V ++ NK+T  ML+ ++ +VA+G   ++ +R+L+Y +G G+ 
Sbjct: 95  PKVRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFGTIGMELLRKLVYTKGSGRN 154

Query: 394 NKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXX 215
              R+ LTN  + +   GK  I CIE++VH I      FK+ N+FL+PF           
Sbjct: 155 GHVRVKLTNEFIEDMFDGK--IRCIEELVHHIYNGTEMFKKVNSFLYPFHLSPPRGGFKG 212

Query: 214 KRN-HYVEGGDAGNREDYINQLVRRM 140
           +++  + +GG  GN +D ++ L+ RM
Sbjct: 213 QKSKSFNDGGSVGNHQDLLSNLLERM 238

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>RLP7_ASHGO (Q75ET5) Ribosome biogenesis protein RLP7|
          Length = 293

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 6/114 (5%)
 Frame = -2

Query: 571 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGY---- 404
           K  ++L LLRL ++  GVF+++      +L+ V PYV  G P+L S+R L+ KR      
Sbjct: 129 KAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGRPSLASIRALVQKRARVVHQ 188

Query: 403 --GKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPF 248
             G+     + L +N V+EE LG   +IC+ED++HEI T+G  F + N FL PF
Sbjct: 189 RAGEAAPVEMVLNDNGVVEERLGDEGVICVEDIIHEIATMGEAFAKCNFFLLPF 242

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>RLP7_DEBHA (Q6BIF5) Ribosome biogenesis protein RLP7|
          Length = 275

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
 Frame = -2

Query: 571 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGY---- 404
           K +K+L LLRL +   GVF+K+  AT+ +L+ + PY+  G P+L S+R+L  KR      
Sbjct: 112 KARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKLFQKRACISVI 171

Query: 403 -GKLNKQRI-PLTNNKVIEEGLGKH-NIICIEDVVHEILTVGPHFKEANNFLWPF 248
             +  + RI  L NN V+E+  G     ICIED++HE+ T+G HFK  +N++ PF
Sbjct: 172 DEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLIHELATLGEHFKTVSNWILPF 226

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>RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment)|
          Length = 212

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 43/114 (37%), Positives = 69/114 (60%), Gaps = 6/114 (5%)
 Frame = -2

Query: 571 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKL- 395
           K +K+LQLLRL +I +GVF+K+ +    +L+ + PY     P+L++VR+L+ KR    + 
Sbjct: 49  KVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTVIXQPSLQTVRQLVQKRATVTVT 108

Query: 394 -----NKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPF 248
                  +++ L +N ++EE LG   IICIED++HE   +   FK   +FL PF
Sbjct: 109 HANDEEPRQVKLNDNNLVEEKLGDEGIICIEDIIHETSHLATTFKTVTHFLDPF 162

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>RL30_PYRHO (O59440) 50S ribosomal protein L30P|
          Length = 155

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
 Frame = -2

Query: 589 INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKR 410
           +N   P  +  L +LRL ++ + V +    + + ML++ + Y+ +G  N +++ +LI KR
Sbjct: 13  VNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAETLAKLIRKR 71

Query: 409 GYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXX 230
           G    NK   P+T+ + ++E LG    + IE+   +++      K+  N    F      
Sbjct: 72  GKLIGNK---PVTD-EYVKEKLG----MTIEEFAQKVINGEMSLKDLPNLKPVFRLHPPR 123

Query: 229 XXXXXKRNH-YVEGGDAGNREDYINQLVRRM 140
                 +   + EGG  G R + IN+L+ RM
Sbjct: 124 GGFKGSKKRSFQEGGALGYRGEKINELIERM 154

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>RL30_PYRFU (Q9HH78) 50S ribosomal protein L30P (PfL30)|
          Length = 155

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
 Frame = -2

Query: 589 INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKR 410
           +N   P  +  L +LRL ++ + V +    + + ML++ + Y+ +G  N +++ +LI KR
Sbjct: 13  VNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAETLAKLIRKR 71

Query: 409 GYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXX 230
           G    NK   P+T+ + ++E LG    + IE+   +++      K+  N    F      
Sbjct: 72  GRLIGNK---PVTD-EYVKEKLG----MTIEEFAQKVVNGEMSLKDLPNLKPVFRLHPPR 123

Query: 229 XXXXXKRNH-YVEGGDAGNREDYINQLVRRM 140
                 +   + EGG  G R + IN+L+ RM
Sbjct: 124 GGFRGSKKRSFKEGGALGYRGEKINELIERM 154

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>RL30_AERPE (Q9YF96) 50S ribosomal protein L30P|
          Length = 162

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
 Frame = -2

Query: 574 PKTKKILQLLRLRQIFNG-VFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGK 398
           P   K L LLRLR+ +   ++        +MLR VE +  YG    + + EL+ KRG   
Sbjct: 20  PDIDKTLYLLRLRRRYTASIYHDSLPGLRDMLRTVEAWTTYGEIEERVLEELLRKRGRIV 79

Query: 397 LNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHF-KEANNFLWPFXXXX--XXX 227
            +K   PLT +K +EE LG   +  + ++  ++++   H+ +     + PF         
Sbjct: 80  GDK---PLT-DKWVEENLG---LSGLGELAEKLVSGELHYHRLEEKGVKPFFRLHPPRGG 132

Query: 226 XXXXKRNHYVEGGDAGNREDYINQLVRRM 140
                +  + +GG+ G R   IN+L+ +M
Sbjct: 133 FKKSIKRMFRDGGELGYRGSAINELILKM 161

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>RL30_SULSO (Q9UX86) 50S ribosomal protein L30P|
          Length = 158

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
 Frame = -2

Query: 556 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 377
           L +LRLR  FN +        + ML +V PY+ +G  +  +++ LI  R    L   +  
Sbjct: 24  LNMLRLRYNFNTMVYPKTSQILGMLNKVSPYITWGEIDPDTLKLLIINR----LETVKGD 79

Query: 376 LTNNKVIEEGLGKHNIICIEDVVHE----ILTVGPHFKEANNFLWPFXXXXXXXXXXXKR 209
             ++  ++E L   NI  +   ++E    +  +  +FK       P             +
Sbjct: 80  KVSDSYVKEVLKIENIDAMVKQLYEGKIYLHKLDEYFKLPIRLHPP-----RGGFKGSVK 134

Query: 208 NHYVEGGDAGNREDYINQLVRRM 140
             Y   G+ G R D IN+L+RRM
Sbjct: 135 RPYKNKGEFGYRGDKINELMRRM 157

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>HCP_SALTY (Q8ZQE8) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 550

 Score = 30.4 bits (67), Expect(2) = 0.027
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
 Frame = -2

Query: 541 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 377
           L+ ++N   L+  + T +N+    E   A+GYP L+  + L+   G G  N+Q    R P
Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308

Query: 376 ----LTNNKVIEEGLGKHN 332
               +T+N +I+  +G ++
Sbjct: 309 GPIVMTSNCIIDPTVGSYD 327



 Score = 26.2 bits (56), Expect(2) = 0.027
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -1

Query: 305 RDLDGWPS---LQGGQQLPVAIQAQGAAGRPQEE 213
           R + GWP    L+G    PV  QAQ  AG P  E
Sbjct: 333 RSIVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSE 366

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>HCP_SALTI (Q8Z829) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 550

 Score = 30.4 bits (67), Expect(2) = 0.027
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
 Frame = -2

Query: 541 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 377
           L+ ++N   L+  + T +N+    E   A+GYP L+  + L+   G G  N+Q    R P
Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308

Query: 376 ----LTNNKVIEEGLGKHN 332
               +T+N +I+  +G ++
Sbjct: 309 GPIVMTSNCIIDPTVGSYD 327



 Score = 26.2 bits (56), Expect(2) = 0.027
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -1

Query: 305 RDLDGWPS---LQGGQQLPVAIQAQGAAGRPQEE 213
           R + GWP    L+G    PV  QAQ  AG P  E
Sbjct: 333 RSIVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSE 366

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>RL30_ARCFU (O28375) 50S ribosomal protein L30P|
          Length = 152

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 38/147 (25%), Positives = 67/147 (45%)
 Frame = -2

Query: 580 MHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYG 401
           +H K K+ L++LRL + ++ V +    +   ML+ V+ YVAYG  N +++  L+  RG  
Sbjct: 13  VHRKIKETLKMLRLHKRYHCVVIPDTPSYRGMLQVVKDYVAYGEINAETLALLLRLRGRL 72

Query: 400 KLNKQRIPLTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXX 221
             N++   LT+  V E    K     IE+    ++      K+  +    F         
Sbjct: 73  TGNRK---LTDEYVKE----KTGYETIEEFAKAVVEGKASLKDLPDLKPVFRLHPPRKGI 125

Query: 220 XXKRNHYVEGGDAGNREDYINQLVRRM 140
              + HY   G+ G   + IN+L+ +M
Sbjct: 126 KNIKWHYPR-GNLGYHGEEINRLLYKM 151

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>RL30_METJA (P54046) 50S ribosomal protein L30P|
          Length = 154

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
 Frame = -2

Query: 556 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 377
           L++LRL ++ + V +   +    ML++V+ YV +G  +  ++ +LI KRG    NK+   
Sbjct: 22  LKMLRLHKVNHCVIIPETETFKGMLQKVKDYVTWGEIDKDTLVKLILKRGRLPGNKK--- 78

Query: 376 LTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEAN-NFLWPFXXXXXXXXXXXKRNHY 200
             N ++I+E  G    + +E++  +I+      KE     ++              +  +
Sbjct: 79  -VNPEIIKELTG----MDVEELAEKIINGEIKLKETPLKPVFRLHPPRKGFERGGIKKPF 133

Query: 199 VEGGDAGNREDYINQLVRRM 140
             GG  G R + IN+L+ +M
Sbjct: 134 SVGGALGYRGEKINELLEKM 153

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>RL30_SULAC (O05642) 50S ribosomal protein L30P|
          Length = 156

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 1/140 (0%)
 Frame = -2

Query: 556 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 377
           L +LRL+  FN +    + +   ML  V  YV +G  N + +R L+      KL   R  
Sbjct: 24  LSMLRLKNAFNAMIYPKDSSIQGMLNLVSSYVTWGELNDEGLRLLV-----SKLEISRGK 78

Query: 376 LTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXX-XXXXXXXXKRNHY 200
             N + +++ L       +E +    L +    K    F  P                 +
Sbjct: 79  KVNEEYVKDKLNVDFQSFVESIKDGKLRLN---KLDEIFSLPIRLHPPKGGFKGKVSRPF 135

Query: 199 VEGGDAGNREDYINQLVRRM 140
             GG+ G R D IN+L+RRM
Sbjct: 136 RAGGEFGYRGDKINELIRRM 155

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>RL30_METVA (P14035) 50S ribosomal protein L30P|
          Length = 154

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 25/90 (27%), Positives = 44/90 (48%)
 Frame = -2

Query: 556 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 377
           +++LRL ++ + V +  N     M+++V+ YV YG  + +++  LI KRG          
Sbjct: 22  MKMLRLHRVNHCVVIPENDHYTGMIKKVKDYVTYGEIDKETLVSLILKRG---------R 72

Query: 376 LTNNKVIEEGLGKHNIICIEDVVHEILTVG 287
           L  NK + E L K  +    D + E +  G
Sbjct: 73  LAGNKRLSEELLKELVELPVDALAEKVLAG 102

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>RL30_METTH (O26132) 50S ribosomal protein L30P|
          Length = 152

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 29/139 (20%), Positives = 62/139 (44%)
 Frame = -2

Query: 556 LQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 377
           +++LRL +I + V ++   + + ML++ + Y+ +G  + +++  +I KRG       R+ 
Sbjct: 21  MEMLRLNRINHAVLVEDTPSYLGMLQKAKDYITWGEVDQETLTAMIRKRG-------RL- 72

Query: 376 LTNNKVIEEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYV 197
           +  +++ +E + +       D     +  G    E       F            +  + 
Sbjct: 73  IGGDRITDEYINEKTAYGSVDEFAAAVFSGEVKLEEAGIKPVFRLHPPRKGYEGIKKAFN 132

Query: 196 EGGDAGNREDYINQLVRRM 140
           EGG  G R + IN L++RM
Sbjct: 133 EGGSLGYRGEKINDLLKRM 151

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>MUKF_PASMU (Q9CN38) Chromosome partition protein mukF|
          Length = 441

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +2

Query: 278 EVRANRQDLVDNVFNADDVVLSKTL-LDDLVVGQRNPLLVELSITSLVDQLPHTLQVRVP 454
           E   N ++L D +  A D + ++ L + D V+GQ N   VE  IT L  +L   +     
Sbjct: 210 ETSGNLRELQDTLNAAGDKLQAQLLRIQDCVIGQENLAFVEQLITDLQAKLDRIISWGQQ 269

Query: 455 ICNIWLDPAEHV 490
             ++W+    HV
Sbjct: 270 AIDLWIGYDRHV 281

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>MUTH_YERPE (Q8ZHU5) DNA mismatch repair protein mutH (Methyl-directed mismatch|
           repair protein)
          Length = 228

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = -1

Query: 362 GHRGGSWKAQHHLH*RRCPRDLDGWPSLQGGQQLPVAIQAQGAA---GRPQEEEEPLRRG 192
           G+ G +W++ H  H  +  R L  W  ++G + +P+A +  GA        EEEE LRR 
Sbjct: 102 GNSGVTWESSHVRH--KLARVL--WVPVEGERHIPLAERRVGAPLLWSPNVEEEELLRRD 157

Query: 191 W 189
           W
Sbjct: 158 W 158

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>DPOL_NPVLD (P30318) DNA polymerase (EC 2.7.7.7)|
          Length = 1014

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
 Frame = -2

Query: 589 INAMHPKTKKILQLLRLRQ-------IFNGVFLKVNKATINMLRRVEPYVAYGYPNL--K 437
           +NA++PK  K L  +R+R         +N  + K+     N L+R+   + YGY  +  K
Sbjct: 581 VNAVNPKLLKTLSEMRVRYKGLRDQCEYNSFYYKLYDKIQNALKRIANSI-YGYYGIFFK 639

Query: 436 SVRELIYKRGYGKLNK 389
            +   I K G GKL +
Sbjct: 640 PLANYITKMGRGKLKE 655

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>AX22B_PHAAU (P32294) Auxin-induced protein 22B (Indole-3-acetic acid-induced|
           protein ARG4)
          Length = 196

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = -2

Query: 526 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 386
           +G+F+KV+      LR+V+  V  GYP L    E ++K   G+ +++
Sbjct: 98  DGIFVKVSMDGAPYLRKVDLKVYGGYPELLKALETMFKLAIGEYSER 144

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>HCP_SHIFL (Q83S05) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 552

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
 Frame = -2

Query: 541 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 377
           L+ ++N   L+  + T +N+    E   A+GYP L+  + L+   G G  N+Q    R P
Sbjct: 253 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 310

Query: 376 ----LTNNKVIEEGLGKHN 332
               +T+N +I+  +G ++
Sbjct: 311 GPIVMTSNCIIDPTVGAYD 329

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>END3_SYNY3 (P73715) Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or|
           apyrimidinic site) lyase)
          Length = 219

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = -2

Query: 511 KVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHN 332
           +VNK T  + +R     A  Y + + + ELI+  G+ +   + I     K++EE  G+  
Sbjct: 55  RVNKVTPALFQRYPDANALAYGDRQEIEELIHSTGFFRNKAKNIQGACRKIVEEFDGE-- 112

Query: 331 IICIEDVVHEILTV-GPHFKEAN 266
              +   + E+LT+ G   K AN
Sbjct: 113 ---VPQRMEELLTLPGVARKTAN 132

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>HCP_ECOLI (P75825) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 550

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
 Frame = -2

Query: 541 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 377
           L+ ++N   L+  + T +N+    E   A+GYP L+  + L+   G G  N+Q    R P
Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308

Query: 376 ----LTNNKVIEEGLGKHN 332
               +T+N +I+  +G ++
Sbjct: 309 GPIVMTSNCIIDPTVGAYD 327

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>HCP_ECOL6 (Q8FJE0) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 550

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
 Frame = -2

Query: 541 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 377
           L+ ++N   L+  + T +N+    E   A+GYP L+  + L+   G G  N+Q    R P
Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308

Query: 376 ----LTNNKVIEEGLGKHN 332
               +T+N +I+  +G ++
Sbjct: 309 GPIVMTSNCIIDPTVGAYD 327

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>HCP_ECO57 (Q8X6L0) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 550

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
 Frame = -2

Query: 541 LRQIFNGVFLKVNKAT-INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ----RIP 377
           L+ ++N   L+  + T +N+    E   A+GYP L+  + L+   G G  N+Q    R P
Sbjct: 251 LKDLYN--LLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFP 308

Query: 376 ----LTNNKVIEEGLGKHN 332
               +T+N +I+  +G ++
Sbjct: 309 GPIVMTSNCIIDPTVGAYD 327

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>AX22D_PHAAU (O24542) Auxin-induced protein 22D (Indole-3-acetic acid-induced|
           protein ARG13)
          Length = 193

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = -2

Query: 526 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 386
           NG+++KV+ A    LR+++  V   YP L    E ++K  +G+ +++
Sbjct: 96  NGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCIFGEYSER 142

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>YR33_THEPE (P15889) Hypothetical 33.4 kDa protein in ribosomal RNA operon|
          Length = 300

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = -2

Query: 529 FNG-VFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIE 353
           FNG V+  + +  +  L+   PYV Y   +L+ V EL+ +RG G L           V++
Sbjct: 73  FNGDVYKALEQTGVEFLKYDPPYV-YTRSDLREVIELMVERGIGAL----------AVVD 121

Query: 352 EGLGKHNIICIEDVVHEILTVGPHFK 275
           E L    I+    V+  +  V  H K
Sbjct: 122 EDLRVVGIVSERHVISLLANVETHVK 147

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>NUD17_HUMAN (P0C025) Putative nucleoside diphosphate-linked moiety X motif 17,|
           mitochondrial precursor (EC 3.6.1.-) (Nudix motif 17)
          Length = 295

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
 Frame = +2

Query: 407 TSLVDQLPHTLQVRVPICNIWLDPAEHV-------DGGLVNLEEHSIEYLSQTQKLEDLL 565
           T L+ +   TL V     N+W+ P  HV       DGGL  L E S  +L Q Q     L
Sbjct: 105 TVLLTRRARTLSVSP---NLWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPL 161

Query: 566 GLW 574
           GLW
Sbjct: 162 GLW 164

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>Y1618_HAEIN (P45275) Hypothetical ABC transporter ATP-binding protein HI1618|
          Length = 217

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 13/53 (24%)
 Frame = +2

Query: 320 NADDVVLSKTLLDDLVVGQRN-------------PLLVELSITSLVDQLPHTL 439
           NADD +   T+LDD+  G  N               L  L IT L D++ HTL
Sbjct: 96  NADDQLFGPTVLDDIAFGPLNQNVPREQAYHIAEQQLERLGITRLKDRMVHTL 148

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>HCP_YERPE (Q8ZGE1) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 550

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
 Frame = -2

Query: 493 INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR--------IPLTNNKVIEEGLGK 338
           IN+    E   A+GYP LK    L+   G G  N+Q         I +T+N +I+  +G 
Sbjct: 266 INIYTHGEMLPAHGYPELKRYPHLVGNYGSGWQNQQTEFAKFPGPILMTSNCIIDPNVGN 325

Query: 337 H 335
           +
Sbjct: 326 Y 326

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>NU5M_STRPU (P15552) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 637

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +3

Query: 462 TYGSTLRSMLMVALLTLRNTPLNICLKRKSWRIFLVFGCMALI 590
           T  ++++S+ +   L L NTPLNI L     + FLVF  +ALI
Sbjct: 85  TCNNSIQSINITLSLWLSNTPLNISLNFIYDQYFLVFLSVALI 127

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>GOGA4_HUMAN (Q13439) Golgin subfamily A member 4 (Trans-Golgi p230) (256 kDa|
            golgin) (Golgin-245) (Protein 72.1)
          Length = 2230

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +2

Query: 371  GQRNPLLVELSITSLVDQLPHTLQVRVPICNIWLDPAEHVDGGLVNLEE-HSIEYLSQTQ 547
            G +N +  + ++ ++ D +  TLQ +   C I     + +D  LV  +E H +E    T 
Sbjct: 1820 GGKNNIQAKQNLENVFDDVQKTLQEKELTCQILEQKIKELDSCLVRQKEVHRVEMEELTS 1879

Query: 548  KLEDLLGL 571
            K E L  L
Sbjct: 1880 KYEKLQAL 1887

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>P3C2G_MOUSE (O70167) Phosphatidylinositol-4-phosphate 3-kinase C2|
            domain-containing gamma polypeptide (EC 2.7.1.154)
            (Phosphoinositide 3-Kinase-C2-gamma) (PtdIns-3-kinase C2
            gamma) (PI3K-C2gamma)
          Length = 1506

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
 Frame = +2

Query: 233  RRLELEWPQEVVGLLEVRANRQDLVDNVFNADDVVLSKTLLD---DLVVGQRNPLLVELS 403
            RR     P E +GLL  R   QD+ +      D +L+  LLD    LV   +    +E  
Sbjct: 775  RRWTFSHPWEALGLLTSRFPDQDIREVAVQQLDTLLTDELLDCLPQLVQAVKFEWNLESP 834

Query: 404  ITSLVDQLPHTLQVRVPICNIWL 472
            +  L+ + P    +RV  C  WL
Sbjct: 835  LVELLPRRP-LQSIRVAHCLYWL 856

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>MUTH_PHOLL (Q7N124) DNA mismatch repair protein mutH (Methyl-directed mismatch|
           repair protein)
          Length = 228

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = -1

Query: 362 GHRGGSWKAQHHLH*RRCPRDLDGWPSLQGGQQLPVAIQAQGAA---GRPQEEEEPLRRG 192
           G+ G +W + H    R+  R L  W  ++G +++P+A +  G+       QEEEE LRR 
Sbjct: 102 GNSGITWGSCHVR--RKLSRVL--WIPVEGEREIPLAKRRVGSPLLWSPNQEEEELLRRD 157

Query: 191 W 189
           W
Sbjct: 158 W 158


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,059,613
Number of Sequences: 219361
Number of extensions: 1684683
Number of successful extensions: 4436
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 4278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4415
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result