ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32g23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_194965.1| Oryza sativa (japonica cultivar-group) putative... 180 4e-42
2dbj|AK111889.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 4e-42
3gb|AY104747.1| Zea mays PCO066213 mRNA sequence 180 4e-42
4gb|AC098696.3| Oryza sativa (japonica cultivar-group) chromosome... 131 3e-27
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 131 3e-27
7ref|XM_713669.1| Candida albicans SC5314 putative ubiquitin-spec... 48 0.037
8gb|AC020728.4|AC020728 Homo sapiens BAC clone RP11-506H20 from 5... 48 0.037
9ref|XM_713754.1| Candida albicans SC5314 putative ubiquitin-spec... 42 2.3
10gb|AC115097.6| Homo sapiens chromosome 11, clone CTD-2532J14, co... 42 2.3
11emb|BX470077.5| Zebrafish DNA sequence from clone CH211-136P17 i... 42 2.3
12gb|AC024293.18| Homo sapiens chromosome 11, clone RP11-425L10, c... 42 2.3
13dbj|AK025353.1| Homo sapiens cDNA: FLJ21700 fis, clone COL09849,... 42 2.3
14ref|NM_103019.2| Arabidopsis thaliana cysteine-type endopeptidas... 40 9.1
15gb|AC145615.3| Homo sapiens BAC clone RP11-1217H2 from UL, compl... 40 9.1
16gb|AC113454.8| Mus musculus chromosome 3, clone RP24-176I19, com... 40 9.1
17emb|Z83127.1|CET23F6 Caenorhabditis elegans Cosmid T23F6, comple... 40 9.1
18emb|AL162575.15| Human DNA sequence from clone RP11-310K10 on ch... 40 9.1
19emb|CR628339.1| Legionella pneumophila str. Lens plasmid pLPL, c... 40 9.1
20gb|AC141587.2| Homo sapiens chromosome 16 clone RP11-1046E19, co... 40 9.1
21gb|AC182397.3| Pan troglodytes BAC clone CH251-345O12 from chrom... 40 9.1
22gb|AC020558.4| Homo sapiens BAC clone RP11-524F11 from 17, compl... 40 9.1
23gb|AC007028.3| Homo sapiens chromosome 16 clone RP5-835P2, compl... 40 9.1
24ref|NM_070031.2| Caenorhabditis elegans RBD (RNA binding domain)... 40 9.1
25gb|AC141248.2| Homo sapiens chromosome 16 clone RP11-1251B5, com... 40 9.1
26gb|AC140890.2| Homo sapiens chromosome 16 clone RP11-188D24, com... 40 9.1
27gb|AC004902.2|AC004902 Homo sapiens PAC clone RP5-823F17 from 7q... 40 9.1
28gb|AC096560.1| Homo sapiens BAC clone RP11-241F6 from 2, complet... 40 9.1
29gb|AC013734.4|AC013734 Homo sapiens BAC clone RP11-557B9 from Y,... 40 9.1
30gb|AC136428.3| Homo sapiens chromosome 16 clone RP11-104C4, comp... 40 9.1
31emb|AL928960.25| Mouse DNA sequence from clone RP23-413K16 on ch... 40 9.1
32gb|AC006424.5|AC006424 Arabidopsis thaliana chromosome I BAC F9L... 40 9.1
33emb|CT573086.9| Mouse DNA sequence from clone RP23-163K5 on chro... 40 9.1
34dbj|AP003155.1| Mus musculus genomic DNA, chromosome 16q clone:R... 40 9.1
35emb|AL450303.10| Human DNA sequence from clone RP11-245D2 on chr... 40 9.1
36gb|AC112259.4| Mus musculus BAC clone RP23-179F7 from 12, comple... 40 9.1 
>ref|NM_194965.1| Oryza sativa (japonica cultivar-group) putative ubiquitin carboxyl
            terminal hydrolase (OSJNBa0050E08.11), mRNA
          Length = 2673

 Score =  180 bits (91), Expect = 4e-42
 Identities = 240/289 (83%), Gaps = 3/289 (1%)
 Strand = Plus / Minus

                                                                        
Query: 375  cgatagaacagcagataagcagcagatgtccttgtttcctcttcattgacagaggagaca 434
            ||||||||||| |||||||| |  ||||||||  | ||||||||    ||||| || || 
Sbjct: 2594 cgatagaacaggagataagctgaggatgtcctgatgtcctcttcgccaacagatgaaacg 2535

                                                                        
Query: 435  tgactatcatcaaaatgataccagctatcttcttctattaacttcgcataggcagaatag 494
            || |||||||||||||||||||| || || ||||||| |||||| ||||| ||||| |||
Sbjct: 2534 tggctatcatcaaaatgataccaactgtcctcttctactaactttgcatacgcagagtag 2475

                                                                        
Query: 495  tgaccacctcccaaaccaccataatgatttatcaccgcatagagttcatagatgtgcggc 554
            |||||||| ||||  || || |||||||| ||||| |||||||||||||| ||| | |||
Sbjct: 2474 tgaccaccacccattccgccgtaatgattgatcactgcatagagttcataaatggggggc 2415

                                                                        
Query: 555  tggtcgcctcctgatgtgtgctttgcgtatttgctcatatcgagatcatggattggaaag 614
            || || |||| |||   ||| ||||| ||| | |||||||| ||||||||||||||||||
Sbjct: 2414 tgatcacctcttga---gtgatttgcatatctactcatatcaagatcatggattggaaag 2358

                                                             
Query: 615  ttcacaaaggtatcaagcttatttttcatataacggctgtatgaaaacc 663
            || ||||||||||||||||| || |||||| | ||||||||||| ||||
Sbjct: 2357 ttgacaaaggtatcaagcttgttcttcataaaccggctgtatgagaacc 2309
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>dbj|AK111889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072M05, full
            insert sequence
          Length = 3441

 Score =  180 bits (91), Expect = 4e-42
 Identities = 240/289 (83%), Gaps = 3/289 (1%)
 Strand = Plus / Minus

                                                                        
Query: 375  cgatagaacagcagataagcagcagatgtccttgtttcctcttcattgacagaggagaca 434
            ||||||||||| |||||||| |  ||||||||  | ||||||||    ||||| || || 
Sbjct: 2874 cgatagaacaggagataagctgaggatgtcctgatgtcctcttcgccaacagatgaaacg 2815

                                                                        
Query: 435  tgactatcatcaaaatgataccagctatcttcttctattaacttcgcataggcagaatag 494
            || |||||||||||||||||||| || || ||||||| |||||| ||||| ||||| |||
Sbjct: 2814 tggctatcatcaaaatgataccaactgtcctcttctactaactttgcatacgcagagtag 2755

                                                                        
Query: 495  tgaccacctcccaaaccaccataatgatttatcaccgcatagagttcatagatgtgcggc 554
            |||||||| ||||  || || |||||||| ||||| |||||||||||||| ||| | |||
Sbjct: 2754 tgaccaccacccattccgccgtaatgattgatcactgcatagagttcataaatggggggc 2695

                                                                        
Query: 555  tggtcgcctcctgatgtgtgctttgcgtatttgctcatatcgagatcatggattggaaag 614
            || || |||| |||   ||| ||||| ||| | |||||||| ||||||||||||||||||
Sbjct: 2694 tgatcacctcttga---gtgatttgcatatctactcatatcaagatcatggattggaaag 2638

                                                             
Query: 615  ttcacaaaggtatcaagcttatttttcatataacggctgtatgaaaacc 663
            || ||||||||||||||||| || |||||| | ||||||||||| ||||
Sbjct: 2637 ttgacaaaggtatcaagcttgttcttcataaaccggctgtatgagaacc 2589
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>gb|AY104747.1| Zea mays PCO066213 mRNA sequence
          Length = 1112

 Score =  180 bits (91), Expect = 4e-42
 Identities = 202/239 (84%)
 Strand = Plus / Minus

                                                                       
Query: 417 tcattgacagaggagacatgactatcatcaaaatgataccagctatcttcttctattaac 476
           ||||| |||||||| |||||||| |||||||||||||||||  | || ||||| | || |
Sbjct: 586 tcattaacagaggaaacatgactgtcatcaaaatgataccaattgtcctcttcaactagc 527

                                                                       
Query: 477 ttcgcataggcagaatagtgaccacctcccaaaccaccataatgatttatcaccgcatag 536
           |||||||| ||||| ||||| ||||| || | ||| ||||||||||||||||| ||||||
Sbjct: 526 ttcgcatatgcagagtagtgtccaccaccgagaccgccataatgatttatcactgcatag 467

                                                                       
Query: 537 agttcatagatgtgcggctggtcgcctcctgatgtgtgctttgcgtatttgctcatatcg 596
           |||||||| | | |  ||||||| |||| ||||||  ||||  | || |||||||||| |
Sbjct: 466 agttcatacacggggtgctggtcacctcttgatgtaggcttcacatacttgctcatattg 407

                                                                      
Query: 597 agatcatggattggaaagttcacaaaggtatcaagcttatttttcatataacggctgta 655
           || |||||||| |||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 406 aggtcatggatcggaaagttcacaaatgtatcaagcttattcttcatataccggctgta 348
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>gb|AC098696.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0050E08, complete sequence
          Length = 180499

 Score =  131 bits (66), Expect = 3e-27
 Identities = 155/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Plus

                                                                         
Query: 480   gcataggcagaatagtgaccacctcccaaaccaccataatgatttatcaccgcatagagt 539
             ||||| ||||| ||||||||||| ||||  || || |||||||| ||||| |||||||||
Sbjct: 93142 gcatacgcagagtagtgaccaccacccattccgccgtaatgattgatcactgcatagagt 93201

                                                                         
Query: 540   tcatagatgtgcggctggtcgcctcctgatgtgtgctttgcgtatttgctcatatcgaga 599
             ||||| ||| | ||||| || |||| |||   ||| ||||| ||| | |||||||| |||
Sbjct: 93202 tcataaatggggggctgatcacctcttga---gtgatttgcatatctactcatatcaaga 93258

                                                                         
Query: 600   tcatggattggaaagttcacaaaggtatcaagcttatttttcatataacggctgtatgaa 659
             ||||||||||||||||| ||||||||||||||||| || |||||| | ||||||||||| 
Sbjct: 93259 tcatggattggaaagttgacaaaggtatcaagcttgttcttcataaaccggctgtatgag 93318

                 
Query: 660   aacc 663
             ||||
Sbjct: 93319 aacc 93322



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 84/103 (81%)
 Strand = Plus / Plus

                                                                         
Query: 375   cgatagaacagcagataagcagcagatgtccttgtttcctcttcattgacagaggagaca 434
             ||||||||||| |||||||| |  ||||||||  | ||||||||    ||||| || || 
Sbjct: 92932 cgatagaacaggagataagctgaggatgtcctgatgtcctcttcgccaacagatgaaacg 92991

                                                        
Query: 435   tgactatcatcaaaatgataccagctatcttcttctattaact 477
             || |||||||||||||||||||| || || ||||||| |||||
Sbjct: 92992 tggctatcatcaaaatgataccaactgtcctcttctactaact 93034
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score =  131 bits (66), Expect = 3e-27
 Identities = 155/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Plus

                                                                           
Query: 480     gcataggcagaatagtgaccacctcccaaaccaccataatgatttatcaccgcatagagt 539
               ||||| ||||| ||||||||||| ||||  || || |||||||| ||||| |||||||||
Sbjct: 3811346 gcatacgcagagtagtgaccaccacccattccgccgtaatgattgatcactgcatagagt 3811405

                                                                           
Query: 540     tcatagatgtgcggctggtcgcctcctgatgtgtgctttgcgtatttgctcatatcgaga 599
               ||||| ||| | ||||| || |||| |||   ||| ||||| ||| | |||||||| |||
Sbjct: 3811406 tcataaatggggggctgatcacctcttga---gtgatttgcatatctactcatatcaaga 3811462

                                                                           
Query: 600     tcatggattggaaagttcacaaaggtatcaagcttatttttcatataacggctgtatgaa 659
               ||||||||||||||||| ||||||||||||||||| || |||||| | ||||||||||| 
Sbjct: 3811463 tcatggattggaaagttgacaaaggtatcaagcttgttcttcataaaccggctgtatgag 3811522

                   
Query: 660     aacc 663
               ||||
Sbjct: 3811523 aacc 3811526



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 84/103 (81%)
 Strand = Plus / Plus

                                                                           
Query: 375     cgatagaacagcagataagcagcagatgtccttgtttcctcttcattgacagaggagaca 434
               ||||||||||| |||||||| |  ||||||||  | ||||||||    ||||| || || 
Sbjct: 3811136 cgatagaacaggagataagctgaggatgtcctgatgtcctcttcgccaacagatgaaacg 3811195

                                                          
Query: 435     tgactatcatcaaaatgataccagctatcttcttctattaact 477
               || |||||||||||||||||||| || || ||||||| |||||
Sbjct: 3811196 tggctatcatcaaaatgataccaactgtcctcttctactaact 3811238
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  131 bits (66), Expect = 3e-27
 Identities = 155/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Plus

                                                                           
Query: 480     gcataggcagaatagtgaccacctcccaaaccaccataatgatttatcaccgcatagagt 539
               ||||| ||||| ||||||||||| ||||  || || |||||||| ||||| |||||||||
Sbjct: 3811267 gcatacgcagagtagtgaccaccacccattccgccgtaatgattgatcactgcatagagt 3811326

                                                                           
Query: 540     tcatagatgtgcggctggtcgcctcctgatgtgtgctttgcgtatttgctcatatcgaga 599
               ||||| ||| | ||||| || |||| |||   ||| ||||| ||| | |||||||| |||
Sbjct: 3811327 tcataaatggggggctgatcacctcttga---gtgatttgcatatctactcatatcaaga 3811383

                                                                           
Query: 600     tcatggattggaaagttcacaaaggtatcaagcttatttttcatataacggctgtatgaa 659
               ||||||||||||||||| ||||||||||||||||| || |||||| | ||||||||||| 
Sbjct: 3811384 tcatggattggaaagttgacaaaggtatcaagcttgttcttcataaaccggctgtatgag 3811443

                   
Query: 660     aacc 663
               ||||
Sbjct: 3811444 aacc 3811447



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 84/103 (81%)
 Strand = Plus / Plus

                                                                           
Query: 375     cgatagaacagcagataagcagcagatgtccttgtttcctcttcattgacagaggagaca 434
               ||||||||||| |||||||| |  ||||||||  | ||||||||    ||||| || || 
Sbjct: 3811057 cgatagaacaggagataagctgaggatgtcctgatgtcctcttcgccaacagatgaaacg 3811116

                                                          
Query: 435     tgactatcatcaaaatgataccagctatcttcttctattaact 477
               || |||||||||||||||||||| || || ||||||| |||||
Sbjct: 3811117 tggctatcatcaaaatgataccaactgtcctcttctactaact 3811159
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>ref|XM_713669.1| Candida albicans SC5314 putative ubiquitin-specific protease
            (CaO19_13639), mRNA
          Length = 4065

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 484  aggcagaatagtgaccacctcccaaaccaccataatgatt 523
            |||||| ||| ||||||||||| || ||||||||||||||
Sbjct: 3367 aggcagtataatgaccacctcctaacccaccataatgatt 3328
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>gb|AC020728.4|AC020728 Homo sapiens BAC clone RP11-506H20 from 5, complete sequence
          Length = 201404

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 116    ttgccaagatgaatcctacttttaaaac 143
              |||||||||||| |||||||||||||||
Sbjct: 146381 ttgccaagatgactcctacttttaaaac 146408
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>ref|XM_713754.1| Candida albicans SC5314 putative ubiquitin-specific protease
            (CaO19_6260), mRNA
          Length = 4119

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 495  tgaccacctcccaaaccaccataatgatt 523
            ||||||||||| || ||||||||||||||
Sbjct: 3356 tgaccacctcctaacccaccataatgatt 3328
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>gb|AC115097.6| Homo sapiens chromosome 11, clone CTD-2532J14, complete sequence
          Length = 132923

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 251 agcaccatgcacaaaaccaca 271
           |||||||||||||||||||||
Sbjct: 486 agcaccatgcacaaaaccaca 506
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>emb|BX470077.5| Zebrafish DNA sequence from clone CH211-136P17 in linkage group 5,
             complete sequence
          Length = 165851

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 506   caaaccaccataatgatttat 526
             |||||||||||||||||||||
Sbjct: 99320 caaaccaccataatgatttat 99340
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>gb|AC024293.18| Homo sapiens chromosome 11, clone RP11-425L10, complete sequence
          Length = 70106

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 251   agcaccatgcacaaaaccaca 271
             |||||||||||||||||||||
Sbjct: 48638 agcaccatgcacaaaaccaca 48658
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>dbj|AK025353.1| Homo sapiens cDNA: FLJ21700 fis, clone COL09849, highly similar to
            HSU14972 Human ribosomal protein S10 mRNA
          Length = 3194

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 251  agcaccatgcacaaaaccaca 271
            |||||||||||||||||||||
Sbjct: 1475 agcaccatgcacaaaaccaca 1455
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>ref|NM_103019.2| Arabidopsis thaliana cysteine-type endopeptidase/ ubiquitin
            thiolesterase AT1G32850 mRNA, complete cds
          Length = 2679

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 492  tagtgaccacctcccaaaccaccataatgatt 523
            |||||||||||||| |  ||||||||||||||
Sbjct: 2516 tagtgaccacctccaaggccaccataatgatt 2485
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>gb|AC145615.3| Homo sapiens BAC clone RP11-1217H2 from UL, complete sequence
          Length = 207889

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      ttggatacaatagcaattta 25
              ||||||||||||||||||||
Sbjct: 175402 ttggatacaatagcaattta 175383
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>gb|AC113454.8| Mus musculus chromosome 3, clone RP24-176I19, complete sequence
          Length = 171480

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   accatgcacaaaaccacatg 273
             ||||||||||||||||||||
Sbjct: 20369 accatgcacaaaaccacatg 20350
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>emb|Z83127.1|CET23F6 Caenorhabditis elegans Cosmid T23F6, complete sequence
          Length = 21513

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  tcatctggaacaacttcaga 346
            ||||||||||||||||||||
Sbjct: 7051 tcatctggaacaacttcaga 7032
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>emb|AL162575.15| Human DNA sequence from clone RP11-310K10 on chromosome 13 Contains the
              3' end of the PCDH20 gene for protocadherin 20 and a CpG
              island, complete sequence
          Length = 163231

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     atagcaatttaccacctcat 34
              ||||||||||||||||||||
Sbjct: 148142 atagcaatttaccacctcat 148123
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>emb|CR628339.1| Legionella pneumophila str. Lens plasmid pLPL, complete sequence
          Length = 59832

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 434   atgactatcatcaaaatgat 453
             ||||||||||||||||||||
Sbjct: 28242 atgactatcatcaaaatgat 28223
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>gb|AC141587.2| Homo sapiens chromosome 16 clone RP11-1046E19, complete sequence
          Length = 186890

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ttggatacaatagcaattta 25
             ||||||||||||||||||||
Sbjct: 83796 ttggatacaatagcaattta 83777
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>gb|AC182397.3| Pan troglodytes BAC clone CH251-345O12 from chromosome 16, complete
              sequence
          Length = 158303

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      ttggatacaatagcaattta 25
              ||||||||||||||||||||
Sbjct: 124787 ttggatacaatagcaattta 124768
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>gb|AC020558.4| Homo sapiens BAC clone RP11-524F11 from 17, complete sequence
          Length = 183334

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   gaacagcagataagcagcag 399
             ||||||||||||||||||||
Sbjct: 57506 gaacagcagataagcagcag 57525
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>gb|AC007028.3| Homo sapiens chromosome 16 clone RP5-835P2, complete sequence
          Length = 148807

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      ttggatacaatagcaattta 25
              ||||||||||||||||||||
Sbjct: 125306 ttggatacaatagcaattta 125325
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>ref|NM_070031.2| Caenorhabditis elegans RBD (RNA binding domain) protein family member
            (rbd-1) (rbd-1) mRNA, complete cds
          Length = 2783

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  tcatctggaacaacttcaga 346
            ||||||||||||||||||||
Sbjct: 1160 tcatctggaacaacttcaga 1141
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>gb|AC141248.2| Homo sapiens chromosome 16 clone RP11-1251B5, complete sequence
          Length = 173206

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ttggatacaatagcaattta 25
             ||||||||||||||||||||
Sbjct: 23499 ttggatacaatagcaattta 23480
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>gb|AC140890.2| Homo sapiens chromosome 16 clone RP11-188D24, complete sequence
          Length = 172153

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      ttggatacaatagcaattta 25
              ||||||||||||||||||||
Sbjct: 126680 ttggatacaatagcaattta 126661
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>gb|AC004902.2|AC004902 Homo sapiens PAC clone RP5-823F17 from 7q36, complete sequence
          Length = 104154

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     ttggatacaatagcaattta 25
             ||||||||||||||||||||
Sbjct: 63676 ttggatacaatagcaattta 63695
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>gb|AC096560.1| Homo sapiens BAC clone RP11-241F6 from 2, complete sequence
          Length = 57407

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 629   aagcttatttttcatataac 648
             ||||||||||||||||||||
Sbjct: 49871 aagcttatttttcatataac 49852
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>gb|AC013734.4|AC013734 Homo sapiens BAC clone RP11-557B9 from Y, complete sequence
          Length = 180019

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     ttggatacaatagcaattta 25
             ||||||||||||||||||||
Sbjct: 85164 ttggatacaatagcaattta 85183
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>gb|AC136428.3| Homo sapiens chromosome 16 clone RP11-104C4, complete sequence
          Length = 193708

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ttggatacaatagcaattta 25
             ||||||||||||||||||||
Sbjct: 94396 ttggatacaatagcaattta 94377
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>emb|AL928960.25| Mouse DNA sequence from clone RP23-413K16 on chromosome 2, complete
              sequence
          Length = 195733

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    gagcaccatgcacaaaacca 269
              ||||||||||||||||||||
Sbjct: 152033 gagcaccatgcacaaaacca 152052
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>gb|AC006424.5|AC006424 Arabidopsis thaliana chromosome I BAC F9L11 genomic sequence, complete
             sequence
          Length = 122836

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 492   tagtgaccacctcccaaaccaccataatgatt 523
             |||||||||||||| |  ||||||||||||||
Sbjct: 26168 tagtgaccacctccaaggccaccataatgatt 26137
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>emb|CT573086.9| Mouse DNA sequence from clone RP23-163K5 on chromosome 16, complete
              sequence
          Length = 208384

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 394    cagcagatgtccttgtttcctctt 417
              ||||||||||||||||| ||||||
Sbjct: 178663 cagcagatgtccttgttgcctctt 178686
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>dbj|AP003155.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-567F3, complete
             sequences
          Length = 157385

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 394   cagcagatgtccttgtttcctctt 417
             ||||||||||||||||| ||||||
Sbjct: 73004 cagcagatgtccttgttgcctctt 72981
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>emb|AL450303.10| Human DNA sequence from clone RP11-245D2 on chromosome 1 Contains four
              genes for novel 7 transmembrane receptor (rhodopsin family)
              proteins, the OR2M7 gene for olfactory receptor, family 2,
              subfamily M, member 7 and the OR5BF1 gene for olfactory
              receptor, family 5, subfamily BF, member 1, complete
              sequence
          Length = 159867

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 262    caaaaccacatgatactgatgtta 285
              |||||| |||||||||||||||||
Sbjct: 117846 caaaacaacatgatactgatgtta 117823
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>gb|AC112259.4| Mus musculus BAC clone RP23-179F7 from 12, complete sequence
          Length = 190525

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    aatttatgcctcaagtgaat 312
              ||||||||||||||||||||
Sbjct: 175128 aatttatgcctcaagtgaat 175147


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,991,421
Number of Sequences: 3902068
Number of extensions: 5991421
Number of successful extensions: 109099
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108950
Number of HSP's gapped (non-prelim): 138
length of query: 663
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 640
effective length of database: 17,143,297,704
effective search space: 10971710530560
effective search space used: 10971710530560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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