| Clone Name | rbags32g21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M60599.1|WHTDHDPD26 T.aestivum dihydrodipicolinate synthase (DHDPS) mRNA, complete cds, clones pDA08-26 Length = 1361 Score = 791 bits (399), Expect = 0.0 Identities = 515/551 (93%), Gaps = 2/551 (0%) Strand = Plus / Minus Query: 10 atgaaatgtctaacaaggagaaccgccgctgttcggcaacgtacattgcacatgatgaac 69 ||||||||||||| ||||||||||||||||||||| ||||||||| || || |||||| Sbjct: 1251 atgaaatgtctaa-aaggagaaccgccgctgttcgt-aacgtacatagcgcacaatgaac 1194 Query: 70 tcactaatttaatacctactgatcaacacaaaatcatcatcatccagaacctgcacctct 129 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1193 tcacttatttaatacctactgatcaacacaaaatcatcatcatccagaacccgcacctct 1134 Query: 130 ttctgtcccacaaagttctcccgcccaattgcttcgacaatacggacaaactcggccctc 189 |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| |||| Sbjct: 1133 ttctgtcccacaaagttctcccgcccgattgcttcaacaatccggacaaactcggtcctc 1074 Query: 190 ctttgaagagaaagaggggcgtatggtctcctgaaaacaggcctcactacaccgagctga 249 ||| |||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 1073 ttttcaagagagagaggggcatacggtctcctgaaaacaggcctcactacaccgagctga 1014 Query: 250 gccagggcagtgttgagaccaatcggattaggctcacaaaacaaccatttcatcagaggc 309 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct: 1013 gccagggcagtgttgagaccaatcggattaggctcagaaaataaccatttcatcagaggc 954 Query: 310 agtagcttctcatttagcgccgcattctctccttcaaacatgagactgcgcatgagacca 369 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 953 agtagcttctcatttagggccgcattctccccttcaaacatgagactgcgcatgagacca 894 Query: 370 ggaacaaggttgcttgctacagaaatgactccagtagcgccatatttccaccttgaatca 429 |||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 893 ggaacaaggttgctagtcacagaaatgactccagtagcaccatacttccaccttgaatca 834 Query: 430 tggcattcgtcatcattgccgctccatattgttatacctttgtcggtgtagcacttcact 489 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 833 tggcattcgtcatcattgccactccatattgttatacctttgtctgtgtagcacttcact 774 Query: 490 cgttcgtgtccaacacattctttcacgcctgccatgtttggatgggctgaaagcgcctca 549 ||||| |||||||||||||||||||| |||||||||||||||| | ||| || |||||| Sbjct: 773 cgttcatgtccaacacattctttcactcctgccatgtttggataagttgagagtgcctca 714 Query: 550 atgactgcagg 560 ||||||||||| Sbjct: 713 atgactgcagg 703
>gb|M60598.1|WHTDHDPD17 T.aestivum dihydrodipicolinate synthase (DHDPS) mRNA, complete cds, clone pDA17 Length = 1458 Score = 478 bits (241), Expect = e-131 Identities = 418/477 (87%) Strand = Plus / Minus Query: 80 aatacctactgatcaacacaaaatcatcatcatccagaacctgcacctctttctgtccca 139 ||||||| ||||||||||| |||||||| |||||||||||| | ||| |||||||||| Sbjct: 1252 aatacctgctgatcaacacgaaatcatcgtcatccagaacccgggactccttctgtccca 1193 Query: 140 caaagttctcccgcccaattgcttcgacaatacggacaaactcggccctcctttgaagag 199 |||||||||| || ||||| ||||||||||| ||||||||||| ||||| | | ||||| Sbjct: 1192 caaagttctcacgtccaatggcttcgacaatccggacaaactccaccctcttctcaagag 1133 Query: 200 aaagaggggcgtatggtctcctgaaaacaggcctcactacaccgagctgagccagggcag 259 ||| || | ||| || |||||||||||| ||||| || ||||||||||||||||| | Sbjct: 1132 gaaggggagtgtacggcaacctgaaaacaggtctcaccacgccgagctgagccagggcgg 1073 Query: 260 tgttgagaccaatcggattaggctcacaaaacaaccatttcatcagaggcagtagcttct 319 |||||||||| ||||| |||||||| || |||| |||||||||||||||||||||||||| Sbjct: 1072 tgttgagaccgatcgggttaggctcgcagaacagccatttcatcagaggcagtagcttct 1013 Query: 320 catttagcgccgcattctctccttcaaacatgagactgcgcatgagaccaggaacaaggt 379 ||||||||||||||||||| |||||||||||||| || |||||||||| |||||||||| Sbjct: 1012 catttagcgccgcattctccccttcaaacatgaggctatgcatgagaccgggaacaaggt 953 Query: 380 tgcttgctacagaaatgactccagtagcgccatatttccaccttgaatcatggcattcgt 439 |||| || |||||||||||||||||||||||||| ||||||||||| ||||| ||||| | Sbjct: 952 tgctcgccacagaaatgactccagtagcgccatacttccaccttgagtcatgacattcat 893 Query: 440 catcattgccgctccatattgttatacctttgtcggtgtagcacttcactcgttcgtgtc 499 |||| |||||||||||||||| ||| |||||||||||||||||||| || || || |||| Sbjct: 892 catcgttgccgctccatattgatatgcctttgtcggtgtagcacttaacccgctcatgtc 833 Query: 500 caacacattctttcacgcctgccatgtttggatgggctgaaagcgcctcaatgactg 556 | |||||||||||||| ||||||||||||| | | |||||||||||||||||||| Sbjct: 832 cgacacattctttcactcctgccatgtttgagtaagatgaaagcgcctcaatgactg 776
>gb|AF290468.1|AF290468 Lolium perenne clone Lp15 unknown sequence Length = 729 Score = 450 bits (227), Expect = e-123 Identities = 329/361 (91%), Gaps = 2/361 (0%) Strand = Plus / Plus Query: 65 tgaactcactaatttaatacctactga-tcaacacaaaatcatcatcatccagaa-cctg 122 ||||||| || ||| |||||||||| | ||||||||||||| ||||||||||||| || | Sbjct: 369 tgaactcgcttattcaatacctactaawtcaacacaaaatcgtcatcatccagaaacccg 428 Query: 123 cacctctttctgtcccacaaagttctcccgcccaattgcttcgacaatacggacaaactc 182 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 429 tgcctctttctgtcccacaaagttctcccgtccaattgcttcgacaatccggacaaactc 488 Query: 183 ggccctcctttgaagagaaagaggggcgtatggtctcctgaaaacaggcctcactacacc 242 | |||||||| |||||||||||| || |||||| |||||||||||||||||||||||| Sbjct: 489 gatcctcctttcaagagaaagaggagcatatggtaacctgaaaacaggcctcactacacc 548 Query: 243 gagctgagccagggcagtgttgagaccaatcggattaggctcacaaaacaaccatttcat 302 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 549 gagctgagccagggcagtgttgagaccaatcggattaggctcgcagaacaaccatttcat 608 Query: 303 cagaggcagtagcttctcatttagcgccgcattctctccttcaaacatgagactgcgcat 362 ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| |||| Sbjct: 609 tagaggcagtagcttctcgtttagcgccgcattctccccttcaaacatcagactgtgcat 668 Query: 363 gagaccaggaacaaggttgcttgctacagaaatgactccagtagcgccatatttccacct 422 ||||||||||||||||||||| || ||||| || ||||||||||| ||||| |||||||| Sbjct: 669 gagaccaggaacaaggttgctagccacagarataactccagtagcaccatacttccacct 728 Query: 423 t 423 | Sbjct: 729 t 729
>gb|DQ447323.1| Zizania latifolia dihydrodipicolinate synthase (DHDPS) mRNA, complete cds Length = 1177 Score = 381 bits (192), Expect = e-102 Identities = 384/448 (85%) Strand = Plus / Minus Query: 82 tacctactgatcaacacaaaatcatcatcatccagaacctgcacctctttctgtcccaca 141 |||||||||| |||||||||||| |||||||| |||||| | |||||||||| |||||| Sbjct: 950 tacctactgaccaacacaaaatcgtcatcatcaagaacccgtgcctctttctgacccaca 891 Query: 142 aagttctcccgcccaattgcttcgacaatacggacaaactcggccctcctttgaagagaa 201 ||||| ||||| || || | ||| ||||| ||||||||||| ||||| ||| | ||| | Sbjct: 890 aagttttcccgtccgatagattcaacaattcggacaaactcaaccctcttttcacgagga 831 Query: 202 agaggggcgtatggtctcctgaaaacaggcctcactacaccgagctgagccagggcagtg 261 || || | || ||| ||||||||||||||| || || || |||||||||||||||||| Sbjct: 830 aggggtacatacggtagcctgaaaacaggccttaccactccaagctgagccagggcagtg 771 Query: 262 ttgagaccaatcggattaggctcacaaaacaaccatttcatcagaggcagtagcttctca 321 |||||| |||||||||| |||| ||||||| ||||||||||| ||||| ||||||||| Sbjct: 770 ttgagagcaatcggatttggctggcaaaacagccatttcatcaatggcaggagcttctca 711 Query: 322 tttagcgccgcattctctccttcaaacatgagactgcgcatgagaccaggaacaaggttg 381 |||||| | ||| ||| ||||| |||||||| || ||||||||||||||||||||||| Sbjct: 710 tttagcactgcagtctgctcttcatacatgagattgtgcatgagaccaggaacaaggttg 651 Query: 382 cttgctacagaaatgactccagtagcgccatatttccaccttgaatcatggcattcgtca 441 || ||||||||||| |||||||| || |||| ||||||||| |||||||||||||| ||| Sbjct: 650 ctagctacagaaataactccagtggcaccatgtttccacctagaatcatggcattcatca 591 Query: 442 tcattgccgctccatattgttatacctttgtcggtgtagcacttcactcgttcgtgtcca 501 ||||| ||||||||||| |||||||||||||| ||||||||||| || | || |||||| Sbjct: 590 tcattaccgctccatatggttatacctttgtcagtgtagcacttaaccctctcatgtcca 531 Query: 502 acacattctttcacgcctgccatgtttg 529 |||||||||||||| ||||||||||||| Sbjct: 530 acacattctttcacacctgccatgtttg 503
>ref|XM_473587.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 349 bits (176), Expect = 6e-93 Identities = 383/452 (84%) Strand = Plus / Minus Query: 78 ttaatacctactgatcaacacaaaatcatcatcatccagaacctgcacctctttctgtcc 137 |||||||||||||||||||||||||||||||||||| |||||| | |||||||| || Sbjct: 822 ttaatacctactgatcaacacaaaatcatcatcatcaagaacccttgcttctttctgacc 763 Query: 138 cacaaagttctcccgcccaattgcttcgacaatacggacaaactcggccctcctttgaag 197 |||||| || ||||| ||||| | ||||||||| ||||| ||||| ||||| ||| ||| Sbjct: 762 cacaaaattttcccgtccaatggattcgacaattcggacgaactcaaccctcttttcaag 703 Query: 198 agaaagaggggcgtatggtctcctgaaaacaggcctcactacaccgagctgagccagggc 257 | ||||| | || ||| |||||||| ||||| | || || |||||||||||||| Sbjct: 702 ggggagaggtacataaggtaatctgaaaacgggccttgccactccaagctgagccagggc 643 Query: 258 agtgttgagaccaatcggattaggctcacaaaacaaccatttcatcagaggcagtagctt 317 |||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 642 ggtgttgagcgcaatcggattaggctggcaaaacaaccatttcatcagaggaagtagctt 583 Query: 318 ctcatttagcgccgcattctctccttcaaacatgagactgcgcatgagaccaggaacaag 377 ||||| ||||| | |||||| ||||| ||||||| | ||||||||||| |||| ||| Sbjct: 582 atcattgagcgctgtattctccccttcgtacatgagcttacgcatgagaccgggaataag 523 Query: 378 gttgcttgctacagaaatgactccagtagcgccatatttccaccttgaatcatggcattc 437 |||||| |||||||||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 522 gttgctggctacagaaatgactccagtggcaccatatttccacctagaatcatggcattc 463 Query: 438 gtcatcattgccgctccatattgttatacctttgtcggtgtagcacttcactcgttcgtg 497 |||||||| || |||||||| |||||||||||||| || |||||||| || | || || Sbjct: 462 atcatcattaccactccatatggttatacctttgtcagtatagcacttaaccctctcatg 403 Query: 498 tccaacacattctttcacgcctgccatgtttg 529 ||||||||||||||| || ||||||||||||| Sbjct: 402 tccaacacattctttgacacctgccatgtttg 371
>ref|XM_471331.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 349 bits (176), Expect = 6e-93 Identities = 380/448 (84%) Strand = Plus / Minus Query: 82 tacctactgatcaacacaaaatcatcatcatccagaacctgcacctctttctgtcccaca 141 |||||||||| ||||||||||||||| || || |||||| | |||| |||| |||||| Sbjct: 1058 tacctactgaccaacacaaaatcatcgtcgtcaagaacccgtgcctcgttctcacccaca 999 Query: 142 aagttctcccgcccaattgcttcgacaatacggacaaactcggccctcctttgaagagaa 201 ||||| ||||| ||||| | ||| || || ||||||||||| ||||| ||| ||||| | Sbjct: 998 aagttttcccgtccaatagattcaacgattcggacaaactctaccctcttttcaagagga 939 Query: 202 agaggggcgtatggtctcctgaaaacaggcctcactacaccgagctgagccagggcagtg 261 ||||| | |||||| |||||||||||||| || || || |||||||||||||||||| Sbjct: 938 agaggtacatatggtaatctgaaaacaggccttaccactccaagctgagccagggcagtg 879 Query: 262 ttgagaccaatcggattaggctcacaaaacaaccatttcatcagaggcagtagcttctca 321 |||||| |||| ||||| |||| |||||||||||||||||||| || | ||||||||| Sbjct: 878 ttgagagcaattggatttggctggcaaaacaaccatttcatcaggggaaagagcttctca 819 Query: 322 tttagcgccgcattctctccttcaaacatgagactgcgcatgagaccaggaacaaggttg 381 ||||||| | |||||| |||||| |||||||| | ||||||||||||||| ||||||| Sbjct: 818 tttagcgtcttattctccccttcatacatgagatcgtgcatgagaccaggaataaggttg 759 Query: 382 cttgctacagaaatgactccagtagcgccatatttccaccttgaatcatggcattcgtca 441 || || |||||||| |||||||| || |||||||||||||| |||||||||||||| ||| Sbjct: 758 ctagccacagaaataactccagtggcaccatatttccacctagaatcatggcattcatca 699 Query: 442 tcattgccgctccatattgttatacctttgtcggtgtagcacttcactcgttcgtgtcca 501 ||||| || |||||||| |||||||||||||| ||||||||||| || | || |||||| Sbjct: 698 tcattaccactccatatggttatacctttgtcagtgtagcacttaaccctctcatgtcca 639 Query: 502 acacattctttcacgcctgccatgtttg 529 |||||||||||||| ||||||| ||||| Sbjct: 638 acacattctttcacacctgccaagtttg 611
>emb|AL607007.3|OSJN00118 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0018J12, complete sequence Length = 120004 Score = 349 bits (176), Expect = 6e-93 Identities = 380/448 (84%) Strand = Plus / Minus Query: 82 tacctactgatcaacacaaaatcatcatcatccagaacctgcacctctttctgtcccaca 141 |||||||||| ||||||||||||||| || || |||||| | |||| |||| |||||| Sbjct: 97845 tacctactgaccaacacaaaatcatcgtcgtcaagaacccgtgcctcgttctcacccaca 97786 Query: 142 aagttctcccgcccaattgcttcgacaatacggacaaactcggccctcctttgaagagaa 201 ||||| ||||| ||||| | ||| || || ||||||||||| ||||| ||| ||||| | Sbjct: 97785 aagttttcccgtccaatagattcaacgattcggacaaactctaccctcttttcaagagga 97726 Query: 202 agaggggcgtatggtctcctgaaaacaggcctcactacaccgagctgagccagggcagtg 261 ||||| | |||||| |||||||||||||| || || || |||||||||||||||||| Sbjct: 97725 agaggtacatatggtaatctgaaaacaggccttaccactccaagctgagccagggcagtg 97666 Query: 262 ttgagaccaatcggattaggctcacaaaacaaccatttcatcagaggcagtagcttctca 321 |||||| |||| ||||| |||| |||||||||||||||||||| || | ||||||||| Sbjct: 97665 ttgagagcaattggatttggctggcaaaacaaccatttcatcaggggaaagagcttctca 97606 Query: 322 tttagcgccgcattctctccttcaaacatgagactgcgcatgagaccaggaacaaggttg 381 ||||||| | |||||| |||||| |||||||| | ||||||||||||||| ||||||| Sbjct: 97605 tttagcgtcttattctccccttcatacatgagatcgtgcatgagaccaggaataaggttg 97546 Query: 382 cttgctacagaaatgactccagtagcgccatatttccaccttgaatcatggcattcgtca 441 || || |||||||| |||||||| || |||||||||||||| |||||||||||||| ||| Sbjct: 97545 ctagccacagaaataactccagtggcaccatatttccacctagaatcatggcattcatca 97486 Query: 442 tcattgccgctccatattgttatacctttgtcggtgtagcacttcactcgttcgtgtcca 501 ||||| || |||||||| |||||||||||||| ||||||||||| || | || |||||| Sbjct: 97485 tcattaccactccatatggttatacctttgtcagtgtagcacttaaccctctcatgtcca 97426 Query: 502 acacattctttcacgcctgccatgtttg 529 |||||||||||||| ||||||| ||||| Sbjct: 97425 acacattctttcacacctgccaagtttg 97398
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 349 bits (176), Expect = 6e-93 Identities = 383/452 (84%) Strand = Plus / Plus Query: 78 ttaatacctactgatcaacacaaaatcatcatcatccagaacctgcacctctttctgtcc 137 |||||||||||||||||||||||||||||||||||| |||||| | |||||||| || Sbjct: 28905240 ttaatacctactgatcaacacaaaatcatcatcatcaagaacccttgcttctttctgacc 28905299 Query: 138 cacaaagttctcccgcccaattgcttcgacaatacggacaaactcggccctcctttgaag 197 |||||| || ||||| ||||| | ||||||||| ||||| ||||| ||||| ||| ||| Sbjct: 28905300 cacaaaattttcccgtccaatggattcgacaattcggacgaactcaaccctcttttcaag 28905359 Query: 198 agaaagaggggcgtatggtctcctgaaaacaggcctcactacaccgagctgagccagggc 257 | ||||| | || ||| |||||||| ||||| | || || |||||||||||||| Sbjct: 28905360 ggggagaggtacataaggtaatctgaaaacgggccttgccactccaagctgagccagggc 28905419 Query: 258 agtgttgagaccaatcggattaggctcacaaaacaaccatttcatcagaggcagtagctt 317 |||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 28905420 ggtgttgagcgcaatcggattaggctggcaaaacaaccatttcatcagaggaagtagctt 28905479 Query: 318 ctcatttagcgccgcattctctccttcaaacatgagactgcgcatgagaccaggaacaag 377 ||||| ||||| | |||||| ||||| ||||||| | ||||||||||| |||| ||| Sbjct: 28905480 atcattgagcgctgtattctccccttcgtacatgagcttacgcatgagaccgggaataag 28905539 Query: 378 gttgcttgctacagaaatgactccagtagcgccatatttccaccttgaatcatggcattc 437 |||||| |||||||||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 28905540 gttgctggctacagaaatgactccagtggcaccatatttccacctagaatcatggcattc 28905599 Query: 438 gtcatcattgccgctccatattgttatacctttgtcggtgtagcacttcactcgttcgtg 497 |||||||| || |||||||| |||||||||||||| || |||||||| || | || || Sbjct: 28905600 atcatcattaccactccatatggttatacctttgtcagtatagcacttaaccctctcatg 28905659 Query: 498 tccaacacattctttcacgcctgccatgtttg 529 ||||||||||||||| || ||||||||||||| Sbjct: 28905660 tccaacacattctttgacacctgccatgtttg 28905691 Score = 349 bits (176), Expect = 6e-93 Identities = 380/448 (84%) Strand = Plus / Minus Query: 82 tacctactgatcaacacaaaatcatcatcatccagaacctgcacctctttctgtcccaca 141 |||||||||| ||||||||||||||| || || |||||| | |||| |||| |||||| Sbjct: 10117361 tacctactgaccaacacaaaatcatcgtcgtcaagaacccgtgcctcgttctcacccaca 10117302 Query: 142 aagttctcccgcccaattgcttcgacaatacggacaaactcggccctcctttgaagagaa 201 ||||| ||||| ||||| | ||| || || ||||||||||| ||||| ||| ||||| | Sbjct: 10117301 aagttttcccgtccaatagattcaacgattcggacaaactctaccctcttttcaagagga 10117242 Query: 202 agaggggcgtatggtctcctgaaaacaggcctcactacaccgagctgagccagggcagtg 261 ||||| | |||||| |||||||||||||| || || || |||||||||||||||||| Sbjct: 10117241 agaggtacatatggtaatctgaaaacaggccttaccactccaagctgagccagggcagtg 10117182 Query: 262 ttgagaccaatcggattaggctcacaaaacaaccatttcatcagaggcagtagcttctca 321 |||||| |||| ||||| |||| |||||||||||||||||||| || | ||||||||| Sbjct: 10117181 ttgagagcaattggatttggctggcaaaacaaccatttcatcaggggaaagagcttctca 10117122 Query: 322 tttagcgccgcattctctccttcaaacatgagactgcgcatgagaccaggaacaaggttg 381 ||||||| | |||||| |||||| |||||||| | ||||||||||||||| ||||||| Sbjct: 10117121 tttagcgtcttattctccccttcatacatgagatcgtgcatgagaccaggaataaggttg 10117062 Query: 382 cttgctacagaaatgactccagtagcgccatatttccaccttgaatcatggcattcgtca 441 || || |||||||| |||||||| || |||||||||||||| |||||||||||||| ||| Sbjct: 10117061 ctagccacagaaataactccagtggcaccatatttccacctagaatcatggcattcatca 10117002 Query: 442 tcattgccgctccatattgttatacctttgtcggtgtagcacttcactcgttcgtgtcca 501 ||||| || |||||||| |||||||||||||| ||||||||||| || | || |||||| Sbjct: 10117001 tcattaccactccatatggttatacctttgtcagtgtagcacttaaccctctcatgtcca 10116942 Query: 502 acacattctttcacgcctgccatgtttg 529 |||||||||||||| ||||||| ||||| Sbjct: 10116941 acacattctttcacacctgccaagtttg 10116914
>dbj|AK071042.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080C02, full insert sequence Length = 1626 Score = 349 bits (176), Expect = 6e-93 Identities = 380/448 (84%) Strand = Plus / Minus Query: 82 tacctactgatcaacacaaaatcatcatcatccagaacctgcacctctttctgtcccaca 141 |||||||||| ||||||||||||||| || || |||||| | |||| |||| |||||| Sbjct: 1306 tacctactgaccaacacaaaatcatcgtcgtcaagaacccgtgcctcgttctcacccaca 1247 Query: 142 aagttctcccgcccaattgcttcgacaatacggacaaactcggccctcctttgaagagaa 201 ||||| ||||| ||||| | ||| || || ||||||||||| ||||| ||| ||||| | Sbjct: 1246 aagttttcccgtccaatagattcaacgattcggacaaactctaccctcttttcaagagga 1187 Query: 202 agaggggcgtatggtctcctgaaaacaggcctcactacaccgagctgagccagggcagtg 261 ||||| | |||||| |||||||||||||| || || || |||||||||||||||||| Sbjct: 1186 agaggtacatatggtaatctgaaaacaggccttaccactccaagctgagccagggcagtg 1127 Query: 262 ttgagaccaatcggattaggctcacaaaacaaccatttcatcagaggcagtagcttctca 321 |||||| |||| ||||| |||| |||||||||||||||||||| || | ||||||||| Sbjct: 1126 ttgagagcaattggatttggctggcaaaacaaccatttcatcaggggaaagagcttctca 1067 Query: 322 tttagcgccgcattctctccttcaaacatgagactgcgcatgagaccaggaacaaggttg 381 ||||||| | |||||| |||||| |||||||| | ||||||||||||||| ||||||| Sbjct: 1066 tttagcgtcttattctccccttcatacatgagatcgtgcatgagaccaggaataaggttg 1007 Query: 382 cttgctacagaaatgactccagtagcgccatatttccaccttgaatcatggcattcgtca 441 || || |||||||| |||||||| || |||||||||||||| |||||||||||||| ||| Sbjct: 1006 ctagccacagaaataactccagtggcaccatatttccacctagaatcatggcattcatca 947 Query: 442 tcattgccgctccatattgttatacctttgtcggtgtagcacttcactcgttcgtgtcca 501 ||||| || |||||||| |||||||||||||| ||||||||||| || | || |||||| Sbjct: 946 tcattaccactccatatggttatacctttgtcagtgtagcacttaaccctctcatgtcca 887 Query: 502 acacattctttcacgcctgccatgtttg 529 |||||||||||||| ||||||| ||||| Sbjct: 886 acacattctttcacacctgccaagtttg 859
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 349 bits (176), Expect = 6e-93 Identities = 383/452 (84%) Strand = Plus / Plus Query: 78 ttaatacctactgatcaacacaaaatcatcatcatccagaacctgcacctctttctgtcc 137 |||||||||||||||||||||||||||||||||||| |||||| | |||||||| || Sbjct: 117402 ttaatacctactgatcaacacaaaatcatcatcatcaagaacccttgcttctttctgacc 117461 Query: 138 cacaaagttctcccgcccaattgcttcgacaatacggacaaactcggccctcctttgaag 197 |||||| || ||||| ||||| | ||||||||| ||||| ||||| ||||| ||| ||| Sbjct: 117462 cacaaaattttcccgtccaatggattcgacaattcggacgaactcaaccctcttttcaag 117521 Query: 198 agaaagaggggcgtatggtctcctgaaaacaggcctcactacaccgagctgagccagggc 257 | ||||| | || ||| |||||||| ||||| | || || |||||||||||||| Sbjct: 117522 ggggagaggtacataaggtaatctgaaaacgggccttgccactccaagctgagccagggc 117581 Query: 258 agtgttgagaccaatcggattaggctcacaaaacaaccatttcatcagaggcagtagctt 317 |||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 117582 ggtgttgagcgcaatcggattaggctggcaaaacaaccatttcatcagaggaagtagctt 117641 Query: 318 ctcatttagcgccgcattctctccttcaaacatgagactgcgcatgagaccaggaacaag 377 ||||| ||||| | |||||| ||||| ||||||| | ||||||||||| |||| ||| Sbjct: 117642 atcattgagcgctgtattctccccttcgtacatgagcttacgcatgagaccgggaataag 117701 Query: 378 gttgcttgctacagaaatgactccagtagcgccatatttccaccttgaatcatggcattc 437 |||||| |||||||||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 117702 gttgctggctacagaaatgactccagtggcaccatatttccacctagaatcatggcattc 117761 Query: 438 gtcatcattgccgctccatattgttatacctttgtcggtgtagcacttcactcgttcgtg 497 |||||||| || |||||||| |||||||||||||| || |||||||| || | || || Sbjct: 117762 atcatcattaccactccatatggttatacctttgtcagtatagcacttaaccctctcatg 117821 Query: 498 tccaacacattctttcacgcctgccatgtttg 529 ||||||||||||||| || ||||||||||||| Sbjct: 117822 tccaacacattctttgacacctgccatgtttg 117853
>gb|L77616.1| Oryza sativa dihydrodipicolinate synthase gene, complete cds Length = 3116 Score = 305 bits (154), Expect = 8e-80 Identities = 376/450 (83%) Strand = Plus / Minus Query: 78 ttaatacctactgatcaacacaaaatcatcatcatccagaacctgcacctctttctgtcc 137 |||||||||||||||||||||||||||||||||||| |||||| | |||||||| || Sbjct: 2837 ttaatacctactgatcaacacaaaatcatcatcatcaagaacccttgcttctttctgacc 2778 Query: 138 cacaaagttctcccgcccaattgcttcgacaatacggacaaactcggccctcctttgaag 197 |||||| || ||||| ||||| | ||||||||| ||||| ||||| ||||| ||| ||| Sbjct: 2777 cacaaaattttcccgtccaatggattcgacaattcggacgaactcaaccctcttttcaag 2718 Query: 198 agaaagaggggcgtatggtctcctgaaaacaggcctcactacaccgagctgagccagggc 257 | ||||| | || ||| |||||||| || || | || || |||||||||||||| Sbjct: 2717 ggggagaggtacataaggtaatctgaaaacgggtcttgccactccaagctgagccagggc 2658 Query: 258 agtgttgagaccaatcggattaggctcacaaaacaaccatttcatcagaggcagtagctt 317 |||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 2657 ggtgttgagcgcaatcggattaggctggcaaaacaaccatttcatcagaggaagtagctt 2598 Query: 318 ctcatttagcgccgcattctctccttcaaacatgagactgcgcatgagaccaggaacaag 377 ||||| ||||| |||||||| ||||| ||||||| || |||||||||| |||| ||| Sbjct: 2597 atcattgagcgctgcattctccccttcgtacatgaggctatgcatgagaccgggaataag 2538 Query: 378 gttgcttgctacagaaatgactccagtagcgccatatttccaccttgaatcatggcattc 437 |||||| |||||||||||||||||||| || |||||||||||||| || ||||||||||| Sbjct: 2537 gttgctggctacagaaatgactccagtggcaccatatttccacctagactcatggcattc 2478 Query: 438 gtcatcattgccgctccatattgttatacctttgtcggtgtagcacttcactcgttcgtg 497 |||||||| || |||||||| |||| ||| |||| | |||||||| || | || || Sbjct: 2477 atcatcattaccactccatatgcttattcctctgtcagcatagcacttaaccctctcatg 2418 Query: 498 tccaacacattctttcacgcctgccatgtt 527 ||||||||||||||| || ||||||||||| Sbjct: 2417 tccaacacattctttgacacctgccatgtt 2388
>gb|U61730.2|CLU61730 Coix lacryma-jobi dihydrodipicolinate synthase (dapA) gene, complete cds Length = 4214 Score = 301 bits (152), Expect = 1e-78 Identities = 332/392 (84%) Strand = Plus / Minus Query: 82 tacctactgatcaacacaaaatcatcatcatccagaacctgcacctctttctgtcccaca 141 ||||||||||||||||| ||||| |||||||| ||||| | |||||||||||||||| Sbjct: 4030 tacctactgatcaacacgaaatcgtcatcatcgagaactcgggtctctttctgtcccaca 3971 Query: 142 aagttctcccgcccaattgcttcgacaatacggacaaactcggccctcctttgaagagaa 201 || |||||||| ||||| || || ||||| ||||| |||||||||||| ||| ||||| | Sbjct: 3970 aaattctcccgtccaatagcctcaacaatccggacgaactcggccctcttttcaagagga 3911 Query: 202 agaggggcgtatggtctcctgaaaacaggcctcactacaccgagctgagccagggcagtg 261 || || | ||||| ||||| |||||||| | || |||||||||||||| |||||| Sbjct: 3910 agtggaacatatggcagtctgaagacaggccttgccacgccgagctgagccagagcagtg 3851 Query: 262 ttgagaccaatcggattaggctcacaaaacaaccatttcatcagaggcagtagcttctca 321 |||||| |||||||||| || | || ||||||||||||||||| ||||| |||||||| Sbjct: 3850 ttgagagcaatcggatttggttggcagaacaaccatttcatcaggggcagcagcttctct 3791 Query: 322 tttagcgccgcattctctccttcaaacatgagactgcgcatgagaccaggaacaaggttg 381 || ||| |||| ||||| |||| ||||||| ||| ||||||| ||||||||||||||| Sbjct: 3790 ttcagcaccgcgttctcgcctttgtacatgaggctgtgcatgagcccaggaacaaggttg 3731 Query: 382 cttgctacagaaatgactccagtagcgccatatttccaccttgaatcatggcattcgtca 441 || | |||||||| ||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 3730 ctagtaacagaaattactccagtagcaccatatttccacctagaatcatggcattcgtcg 3671 Query: 442 tcattgccgctccatattgttatacctttgtc 473 ||||| |||||||| ||||||||||||||||| Sbjct: 3670 tcattaccgctccaaattgttatacctttgtc 3639
>gb|BT016780.1| Zea mays clone Contig613 mRNA sequence Length = 1334 Score = 198 bits (100), Expect = 1e-47 Identities = 361/448 (80%) Strand = Plus / Minus Query: 82 tacctactgatcaacacaaaatcatcatcatccagaacctgcacctctttctgtcccaca 141 ||||||||||||||||| ||||| |||||||| |||||||| |||| ||||| ||||| Sbjct: 1150 tacctactgatcaacacgaaatcgtcatcatctagaacctgggcctccttctgccccacg 1091 Query: 142 aagttctcccgcccaattgcttcgacaatacggacaaactcggccctcctttgaagagaa 201 || || ||||| ||||||| || ||||| ||||| |||||||||||| ||| ||||| Sbjct: 1090 aaattttcccgtccaattgactcaacaatccggacgaactcggccctcttttcaagaggg 1031 Query: 202 agaggggcgtatggtctcctgaaaacaggcctcactacaccgagctgagccagggcagtg 261 || || |||| || ||||| |||||||| | || |||||||||||||| |||||| Sbjct: 1030 agcggaacgtacggcagtctgaagacaggccttgccacgccgagctgagccagagcagtg 971 Query: 262 ttgagaccaatcggattaggctcacaaaacaaccatttcatcagaggcagtagcttctca 321 ||||| |||| ||||| |||| || |||| |||||||||||| ||| |||||||| Sbjct: 970 ttgagggcaataggatttggctggcagaacagccatttcatcaggggcgacagcttctcg 911 Query: 322 tttagcgccgcattctctccttcaaacatgagactgcgcatgagaccaggaacaaggttg 381 || |||| || ||||| |||| ||||||| ||| ||||||| || |||||||||||| Sbjct: 910 ttcagcgtggcgttctcgcctttgtacatgaggctgtgcatgagcccgggaacaaggttg 851 Query: 382 cttgctacagaaatgactccagtagcgccatatttccaccttgaatcatggcattcgtca 441 || | || |||||||| ||||||||||||| ||||||| | ||||| ||||| ||||| Sbjct: 850 ctggtaacggaaatgaccccagtagcgccatgtttccacttagaatcgtggcactcgtcg 791 Query: 442 tcattgccgctccatattgttatacctttgtcggtgtagcacttcactcgttcgtgtcca 501 || || |||||||| |||||||| |||||||| | |||| ||| || | ||||| ||| Sbjct: 790 tcgttaccgctccaaattgttatgcctttgtcagcgtagtgcttaaccctctcgtgccca 731 Query: 502 acacattctttcacgcctgccatgtttg 529 |||||||| || || || |||||||||| Sbjct: 730 acacattccttgacacccgccatgtttg 703
>gb|AY107228.1| Zea mays PCO090048 mRNA sequence Length = 1425 Score = 198 bits (100), Expect = 1e-47 Identities = 361/448 (80%) Strand = Plus / Minus Query: 82 tacctactgatcaacacaaaatcatcatcatccagaacctgcacctctttctgtcccaca 141 ||||||||||||||||| ||||| |||||||| |||||||| |||| ||||| ||||| Sbjct: 1231 tacctactgatcaacacgaaatcgtcatcatctagaacctgggcctccttctgccccacg 1172 Query: 142 aagttctcccgcccaattgcttcgacaatacggacaaactcggccctcctttgaagagaa 201 || || ||||| ||||||| || ||||| ||||| |||||||||||| ||| ||||| Sbjct: 1171 aaattttcccgtccaattgactcaacaatccggacgaactcggccctcttttcaagaggg 1112 Query: 202 agaggggcgtatggtctcctgaaaacaggcctcactacaccgagctgagccagggcagtg 261 || || |||| || ||||| |||||||| | || |||||||||||||| |||||| Sbjct: 1111 agcggaacgtacggcagtctgaagacaggccttgccacgccgagctgagccagagcagtg 1052 Query: 262 ttgagaccaatcggattaggctcacaaaacaaccatttcatcagaggcagtagcttctca 321 ||||| |||| ||||| |||| || |||| |||||||||||| ||| |||||||| Sbjct: 1051 ttgagggcaataggatttggctggcagaacagccatttcatcaggggcgacagcttctcg 992 Query: 322 tttagcgccgcattctctccttcaaacatgagactgcgcatgagaccaggaacaaggttg 381 || |||| || ||||| |||| ||||||| ||| ||||||| || |||||||||||| Sbjct: 991 ttcagcgtggcgttctcgcctttgtacatgaggctgtgcatgagcccgggaacaaggttg 932 Query: 382 cttgctacagaaatgactccagtagcgccatatttccaccttgaatcatggcattcgtca 441 || | || |||||||| ||||||||||||| ||||||| | ||||| ||||| ||||| Sbjct: 931 ctggtaacggaaatgaccccagtagcgccatgtttccacttagaatcgtggcactcgtcg 872 Query: 442 tcattgccgctccatattgttatacctttgtcggtgtagcacttcactcgttcgtgtcca 501 || || |||||||| |||||||| |||||||| | |||| ||| || | ||||| ||| Sbjct: 871 tcgttaccgctccaaattgttatgcctttgtcagcgtagtgcttaaccctctcgtgccca 812 Query: 502 acacattctttcacgcctgccatgtttg 529 |||||||| || || || |||||||||| Sbjct: 811 acacattccttgacacccgccatgtttg 784
>emb|X52850.1|ZMDHPS Maize mRNA for dihydrodipicolinate synthase (EC 4.2.1.52) Length = 1400 Score = 190 bits (96), Expect = 3e-45 Identities = 360/448 (80%) Strand = Plus / Minus Query: 82 tacctactgatcaacacaaaatcatcatcatccagaacctgcacctctttctgtcccaca 141 ||||||||||||||||| ||||| |||||||| |||||| | |||| ||||| ||||| Sbjct: 1178 tacctactgatcaacacgaaatcgtcatcatctagaaccggtgcctccttctgccccacg 1119 Query: 142 aagttctcccgcccaattgcttcgacaatacggacaaactcggccctcctttgaagagaa 201 || || ||||| ||||||| || ||||| ||||| |||||||||||| ||| ||||| Sbjct: 1118 aaattttcccgtccaattgactcaacaatccggacgaactcggccctcttttcaagaggg 1059 Query: 202 agaggggcgtatggtctcctgaaaacaggcctcactacaccgagctgagccagggcagtg 261 || || |||| || ||||| |||||||| | || |||||||||||||| |||||| Sbjct: 1058 agcggaacgtacggcagtctgaagacaggccttgccacgccgagctgagccagagcagtg 999 Query: 262 ttgagaccaatcggattaggctcacaaaacaaccatttcatcagaggcagtagcttctca 321 ||||| |||| ||||| |||| || |||| |||||||||||| ||| |||||||| Sbjct: 998 ttgagggcaataggatttggctggcagaacagccatttcatcaggggcgacagcttctcg 939 Query: 322 tttagcgccgcattctctccttcaaacatgagactgcgcatgagaccaggaacaaggttg 381 || |||| || ||||| |||| ||||||| ||| ||||||| || |||||||||||| Sbjct: 938 ttcagcgtggcgttctcgcctttgtacatgaggctgtgcatgagcccgggaacaaggttg 879 Query: 382 cttgctacagaaatgactccagtagcgccatatttccaccttgaatcatggcattcgtca 441 || | || |||||||| ||||||||||||| ||||||| | ||||| ||||| ||||| Sbjct: 878 ctggtaacggaaatgaccccagtagcgccatgtttccacttagaatcgtggcactcgtcg 819 Query: 442 tcattgccgctccatattgttatacctttgtcggtgtagcacttcactcgttcgtgtcca 501 || || |||||||| |||||||| |||||||| | |||| ||| || | ||||| ||| Sbjct: 818 tcgttaccgctccaaattgttatgcctttgtcagcgtagtgcttaaccctctcgtgccca 759 Query: 502 acacattctttcacgcctgccatgtttg 529 |||||||| || || || |||||||||| Sbjct: 758 acacattccttgacacccgccatgtttg 731
>emb|X79060.2|NSDHDPSR1 Nicotiana sylvestris dhdps-r1 gene for dihydrodipicolinate synthase Length = 1773 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 358 cgcatgagaccaggaacaaggttgcttgctacagaaatgactccagtagcgccatatttc 417 ||||| ||||||||||| | |||||| | |||||||| ||||| ||||| ||||| | | Sbjct: 675 cgcatcagaccaggaaccaagttgctggtaacagaaataactcctgtagcaccataatcc 616 Query: 418 caccttgaatcatggcattcgtcatcattgccgctcca 455 ||||||||| |||||||||||||||||||||| ||||| Sbjct: 615 caccttgaaacatggcattcgtcatcattgccactcca 578
>emb|X79675.1|NTDHDPS N.tabacum dhdps mRNA Length = 1366 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 388 acagaaatgactccagtagcgccatatttccaccttgaatcatggcattcgtcatcattg 447 |||||||| ||||| ||||| ||||| | |||||||||| |||||||||| ||||||||| Sbjct: 810 acagaaataactcctgtagcaccataatcccaccttgaaacatggcattcatcatcattg 751 Query: 448 ccgctcca 455 || ||||| Sbjct: 750 ccactcca 743
>gb|BT014092.1| Lycopersicon esculentum clone 133196F, mRNA sequence Length = 1368 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 359 gcatgagaccaggaacaaggttgcttgctacagaaatgactccagtagcgccatatttcc 418 |||| ||||||||||| | |||||| | |||||||| ||||| | |||||||| | || Sbjct: 889 gcatcagaccaggaaccaagttgctggtgacagaaataactcctgcagcgccatgatccc 830 Query: 419 accttgaatcatggcattcgtcatcattgccgctcca 455 ||||||| ||||||||||| |||||||| || ||||| Sbjct: 829 accttgagtcatggcattcatcatcattcccactcca 793 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 79 taatacctactgatcaacacaaaatcatcatcatcca 115 |||||||||| | ||| ||||||||||||||||||| Sbjct: 1169 taatacctaccaagcaaaacaaaatcatcatcatcca 1133
>gb|AC131921.9| Mus musculus chromosome 12, clone RP24-231P11, complete sequence Length = 163117 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 ttgaacaaatgaaatgtctaacaagg 27 ||||||| |||||||||||||||||| Sbjct: 43947 ttgaacacatgaaatgtctaacaagg 43922
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 269 caatcggattaggctcacaaaacaaccatttcat 302 |||| ||||||||||||||||| | ||||||||| Sbjct: 3825180 caataggattaggctcacaaaatagccatttcat 3825213
>dbj|AK115225.1| Ciona intestinalis cDNA, clone:cieg040e13, full insert sequence Length = 1713 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 cctctttctgtcccacaaagtt 146 |||||||||||||||||||||| Sbjct: 1362 cctctttctgtcccacaaagtt 1341
>gb|AC174598.2| Mus musculus BAC clone RP24-234D9 from chromosome 12, complete sequence Length = 199237 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 ttgaacaaatgaaatgtctaacaagg 27 ||||||| |||||||||||||||||| Sbjct: 185666 ttgaacacatgaaatgtctaacaagg 185641
>ref|NM_130106.2| Arabidopsis thaliana DHDPS2 (DIHYDRODIPICOLINATE SYNTHASE); dihydrodipicolinate synthase AT2G45440 (DHDPS2) mRNA, complete cds Length = 1700 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 99 aaaatcatcatcatccagaacctgcacctctttctgtcccacaaa 143 ||||||||||||||| ||| |||| || ||||||| |||||||| Sbjct: 1531 aaaatcatcatcatcaagagcctgaacatctttctcacccacaaa 1487
>ref|NM_142350.1| Drosophila melanogaster CG11896-RA (CG11896), mRNA Length = 2810 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 gtctcctgaaaacaggcctca 235 ||||||||||||||||||||| Sbjct: 2038 gtctcctgaaaacaggcctca 2018
>gb|AC109519.4| Homo sapiens BAC clone RP11-500N18 from 4, complete sequence Length = 7387 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 cgcctcaatgactgcagggag 563 ||||||||||||||||||||| Sbjct: 974 cgcctcaatgactgcagggag 954
>gb|AC002387.3| Arabidopsis thaliana chromosome 2 clone F4L23 map CIC02E07, complete sequence Length = 122928 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 99 aaaatcatcatcatccagaacctgcacctctttctgtcccacaaa 143 ||||||||||||||| ||| |||| || ||||||| |||||||| Sbjct: 15092 aaaatcatcatcatcaagagcctgaacatctttctcacccacaaa 15136
>gb|AY094631.1| Drosophila melanogaster AT03259 full insert cDNA Length = 2800 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 gtctcctgaaaacaggcctca 235 ||||||||||||||||||||| Sbjct: 2010 gtctcctgaaaacaggcctca 1990
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 ctcctgaaaacaggcctcact 237 ||||||||||||||||||||| Sbjct: 709208 ctcctgaaaacaggcctcact 709188
>gb|AC007807.8|AC007807 Drosophila melanogaster, chromosome 3R, region 89E-89E, BAC clone BACR01E04, complete sequence Length = 172674 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 gtctcctgaaaacaggcctca 235 ||||||||||||||||||||| Sbjct: 131565 gtctcctgaaaacaggcctca 131585
>gb|AF200325.1|AF200325 Arabidopsis thaliana dihydrodipicolinate synthase 2 (DHDPS2) gene, complete cds Length = 1815 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 99 aaaatcatcatcatccagaacctgcacctctttctgtcccacaaa 143 ||||||||||||||| ||| |||| || ||||||| |||||||| Sbjct: 1755 aaaatcatcatcatcaagagcctgaacatctttctcacccacaaa 1711
>gb|AC019170.7| Homo sapiens BAC clone RP11-162G9 from 4, complete sequence Length = 185281 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 cgcctcaatgactgcagggag 563 ||||||||||||||||||||| Sbjct: 184255 cgcctcaatgactgcagggag 184235
>gb|AC007824.5|AC007824 Drosophila melanogaster, chromosome 3R, region 89E-90A, BAC clone BACR02L16, complete sequence Length = 190866 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 gtctcctgaaaacaggcctca 235 ||||||||||||||||||||| Sbjct: 72095 gtctcctgaaaacaggcctca 72115
>gb|BT004823.1| Arabidopsis thaliana At2g45440 gene, complete cds Length = 1098 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 99 aaaatcatcatcatccagaacctgcacctctttctgtcccacaaa 143 ||||||||||||||| ||| |||| || ||||||| |||||||| Sbjct: 1077 aaaatcatcatcatcaagagcctgaacatctttctcacccacaaa 1033
>gb|AY089070.1| Arabidopsis thaliana clone 26817 mRNA, complete sequence Length = 1477 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 99 aaaatcatcatcatccagaacctgcacctctttctgtcccacaaa 143 ||||||||||||||| ||| |||| || ||||||| |||||||| Sbjct: 1336 aaaatcatcatcatcaagagcctgaacatctttctcacccacaaa 1292
>ref|NM_208961.1| Eremothecium gossypii ACR206Cp (ACR206C), mRNA Length = 240 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 ctcctgaaaacaggcctcact 237 ||||||||||||||||||||| Sbjct: 80 ctcctgaaaacaggcctcact 100
>gb|AE003716.5| Drosophila melanogaster chromosome 3R, section 54 of 118 of the complete sequence Length = 220035 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 gtctcctgaaaacaggcctca 235 ||||||||||||||||||||| Sbjct: 118140 gtctcctgaaaacaggcctca 118160
>gb|AC103673.8| Mus musculus chromosome 1, clone RP24-336F10, complete sequence Length = 187158 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gggcagtgttgagaccaatc 273 |||||||||||||||||||| Sbjct: 143179 gggcagtgttgagaccaatc 143198
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tactgatcaacacaaaatca 105 |||||||||||||||||||| Sbjct: 2053936 tactgatcaacacaaaatca 2053955
>gb|AC110247.9| Mus musculus chromosome 1, clone RP23-254H20, complete sequence Length = 209326 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gggcagtgttgagaccaatc 273 |||||||||||||||||||| Sbjct: 75949 gggcagtgttgagaccaatc 75968
>gb|AC127697.3| Mus musculus chromosome 15 clone RP24-83I10, complete sequence Length = 205653 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tcaacacaaaatcatcatca 111 |||||||||||||||||||| Sbjct: 154262 tcaacacaaaatcatcatca 154243
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 ttgaatcatggcattcgtca 441 |||||||||||||||||||| Sbjct: 2153242 ttgaatcatggcattcgtca 2153223
>gb|AY364468.1| Triticum monococcum cytosolic glutathione peroxidase (gpc1) mRNA, complete cds Length = 901 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 actacaccgagctgagccag 254 |||||||||||||||||||| Sbjct: 265 actacaccgagctgagccag 284
>emb|AL590043.7| Human DNA sequence from clone RP11-224F14 on chromosome X Contains a CpG island, complete sequence Length = 142769 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 tcaacacaaaatcatcatcatcca 115 ||||| |||||||||||||||||| Sbjct: 33466 tcaactcaaaatcatcatcatcca 33489
>ref|NM_001031139.1| Gallus gallus similar to Vesicle docking protein p115 (LOC422575), mRNA Length = 3755 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 acaaagttctcccgcccaat 158 |||||||||||||||||||| Sbjct: 1811 acaaagttctcccgcccaat 1792
>emb|AJ238745.1|HVU238745 Hordeum vulgare mRNA for glutathione peroxidase-like protein GPX54Hv Length = 915 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 actacaccgagctgagccag 254 |||||||||||||||||||| Sbjct: 275 actacaccgagctgagccag 294
>emb|AJ010455.1|TAE010455 Triticum aestivum glutathione peroxidase Length = 327 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 actacaccgagctgagccag 254 |||||||||||||||||||| Sbjct: 254 actacaccgagctgagccag 273
>emb|AJ719305.1| Gallus gallus mRNA for hypothetical protein, clone 1e12 Length = 3755 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 acaaagttctcccgcccaat 158 |||||||||||||||||||| Sbjct: 1811 acaaagttctcccgcccaat 1792
>gb|AC100776.2| Homo sapiens chromosome 18, clone CTD-2009D8, complete sequence Length = 67543 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 acaaaacaaccatttcatca 304 |||||||||||||||||||| Sbjct: 60858 acaaaacaaccatttcatca 60839
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ccgagctgagccagggcagt 260 |||||||||||||||||||| Sbjct: 3795239 ccgagctgagccagggcagt 3795258
>gb|AC091135.9| Homo sapiens chromosome 18, clone RP11-289E15, complete sequence Length = 166207 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 acaaaacaaccatttcatca 304 |||||||||||||||||||| Sbjct: 142160 acaaaacaaccatttcatca 142179
>emb|AL929509.15| Zebrafish DNA sequence from clone CH211-165I22 in linkage group 1, complete sequence Length = 139628 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 aatcggattaggctcacaaa 289 |||||||||||||||||||| Sbjct: 100311 aatcggattaggctcacaaa 100292
>emb|AL772343.17| Mouse DNA sequence from clone RP23-196N14 on chromosome 4, complete sequence Length = 154059 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 attctctccttcaaacatgagact 356 ||||| |||||||||||||||||| Sbjct: 14707 attctttccttcaaacatgagact 14684
>dbj|AB109808.1| Scaphinotus bilobus mitochondrial CO1 gene for cytochrome oxidase subunit 1, partial cds, isolae:No. 3 Length = 1059 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 tcatccagaacctgcacctctttc 132 |||||||| ||||||||||||||| Sbjct: 328 tcatccagtacctgcacctctttc 305
>dbj|AB109806.1| Scaphinotus viridis mitochondrial CO1 gene for cytochrome oxidase subunit 1, partial cds, isolae:No. 1 (97B4) Length = 1059 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 tcatccagaacctgcacctctttc 132 |||||||| ||||||||||||||| Sbjct: 328 tcatccagtacctgcacctctttc 305
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 actacaccgagctgagccag 254 |||||||||||||||||||| Sbjct: 2610104 actacaccgagctgagccag 2610085
>emb|BX936290.16| Zebrafish DNA sequence from clone DKEY-188L8 in linkage group 22, complete sequence Length = 79381 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 aatcggattaggctcacaaa 289 |||||||||||||||||||| Sbjct: 7804 aatcggattaggctcacaaa 7823
>gb|AC155348.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH097M21, complete sequence Length = 131063 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 aacacaaaatcatcatcatc 113 |||||||||||||||||||| Sbjct: 99216 aacacaaaatcatcatcatc 99235 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,053,931 Number of Sequences: 3902068 Number of extensions: 5053931 Number of successful extensions: 90903 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90643 Number of HSP's gapped (non-prelim): 253 length of query: 570 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 547 effective length of database: 17,143,297,704 effective search space: 9377383844088 effective search space used: 9377383844088 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)