ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags32g06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT024181.1| Zea mays clone EL01N0316B03 mRNA sequence Length = 1595 Score = 394 bits (199), Expect = e-106 Identities = 328/371 (88%) Strand = Plus / Plus Query: 201 agaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctcttcc 260 ||||||||| ||| |||||||||||| || || |||| || || |||||||||||||| Sbjct: 354 agaaagccagtggcggcagtggcaggctgctgttgagccccgatcgcatcctcctcttcc 413 Query: 261 tgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgggt 320 | || ||||| ||||| || || ||||||||||| ||||| || |||||||||||||||| Sbjct: 414 tcagcctctctgcgatgataaaggcgagctccagggactgggaggcattcagccttgggt 473 Query: 321 cgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccga 380 ||||||| |||||||||||||| | ||| || ||||||||||||||||| |||||||||| Sbjct: 474 cgcagtgggtgtggtagcggtcgctcagatcgtcgaaggtcacggtccgtgatccaccga 533 Query: 381 tgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcctt 440 |||||||||| |||||||| ||||||||||||||||||| ||| || ||||||||||||| Sbjct: 534 tgcactcggtcacgttctgcccagtcatttcaaggtggacgcccccagggtggcttcctt 593 Query: 441 cttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacgag 500 |||||||||||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 594 cttggtcatgcacatcgaagaaggcacgcacttcagccagaatggagtcaaatggacgag 653 Query: 501 tcttcagaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgtga 560 ||||||| ||||| |||||||||||||||||||| ||||| || |||||||||||||||| Sbjct: 654 tcttcaggccacaaggggccttgatggtgtttccatgcataggatcagtaatccatgtga 713 Query: 561 caatctgtcca 571 ||||| ||||| Sbjct: 714 caatcagtcca 724
>ref|XM_506482.1| PREDICTED Oryza sativa (japonica cultivar-group), P0594D10.136 mRNA Length = 1966 Score = 391 bits (197), Expect = e-105 Identities = 329/373 (88%) Strand = Plus / Minus Query: 199 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 258 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 1684 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 1625 Query: 259 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 318 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 1624 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 1565 Query: 319 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 378 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 1564 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 1505 Query: 379 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 438 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 1504 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 1445 Query: 439 ttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacg 498 |||||| ||||| ||||||||||| ||||| || || || |||||| ||||||||||| Sbjct: 1444 ttcttgatcatggacatcgaagaacgcacgtacttcagccagaatggaatcgaatggacg 1385 Query: 499 agtcttcagaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgt 558 |||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1384 agtcttcagaccacatggagccttgatggtgtttccatgcatgggatcagtaatccatgt 1325 Query: 559 gacaatctgtcca 571 ||||||||||||| Sbjct: 1324 gacaatctgtcca 1312
>ref|NM_189880.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1966 Score = 391 bits (197), Expect = e-105 Identities = 329/373 (88%) Strand = Plus / Minus Query: 199 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 258 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 1683 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 1624 Query: 259 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 318 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 1623 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 1564 Query: 319 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 378 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 1563 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 1504 Query: 379 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 438 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 1503 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 1444 Query: 439 ttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacg 498 |||||| ||||| ||||||||||| ||||| || || || |||||| ||||||||||| Sbjct: 1443 ttcttgatcatggacatcgaagaacgcacgtacttcagccagaatggaatcgaatggacg 1384 Query: 499 agtcttcagaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgt 558 |||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1383 agtcttcagaccacatggagccttgatggtgtttccatgcatgggatcagtaatccatgt 1324 Query: 559 gacaatctgtcca 571 ||||||||||||| Sbjct: 1323 gacaatctgtcca 1311
>dbj|AB122058.1| Oryza sativa (japonica cultivar-group) DAHPS2 mRNA for 3-deoxy-D-arabino heptulosonate-7-phosphate synthase, complete cds Length = 1951 Score = 391 bits (197), Expect = e-105 Identities = 329/373 (88%) Strand = Plus / Minus Query: 199 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 258 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 1696 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 1637 Query: 259 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 318 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 1636 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 1577 Query: 319 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 378 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 1576 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 1517 Query: 379 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 438 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 1516 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 1457 Query: 439 ttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacg 498 |||||| ||||| ||||||||||| ||||| || || || |||||| ||||||||||| Sbjct: 1456 ttcttgatcatggacatcgaagaacgcacgtacttcagccagaatggaatcgaatggacg 1397 Query: 499 agtcttcagaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgt 558 |||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1396 agtcttcagaccacatggagccttgatggtgtttccatgcatgggatcagtaatccatgt 1337 Query: 559 gacaatctgtcca 571 ||||||||||||| Sbjct: 1336 gacaatctgtcca 1324
>dbj|AK105687.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-B12, full insert sequence Length = 1966 Score = 391 bits (197), Expect = e-105 Identities = 329/373 (88%) Strand = Plus / Minus Query: 199 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 258 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 1683 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 1624 Query: 259 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 318 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 1623 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 1564 Query: 319 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 378 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 1563 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 1504 Query: 379 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 438 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 1503 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 1444 Query: 439 ttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacg 498 |||||| ||||| ||||||||||| ||||| || || || |||||| ||||||||||| Sbjct: 1443 ttcttgatcatggacatcgaagaacgcacgtacttcagccagaatggaatcgaatggacg 1384 Query: 499 agtcttcagaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgt 558 |||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1383 agtcttcagaccacatggagccttgatggtgtttccatgcatgggatcagtaatccatgt 1324 Query: 559 gacaatctgtcca 571 ||||||||||||| Sbjct: 1323 gacaatctgtcca 1311
>dbj|AK069968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038D13, full insert sequence Length = 1967 Score = 391 bits (197), Expect = e-105 Identities = 329/373 (88%) Strand = Plus / Minus Query: 199 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 258 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 1684 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 1625 Query: 259 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 318 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 1624 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 1565 Query: 319 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 378 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 1564 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 1505 Query: 379 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 438 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 1504 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 1445 Query: 439 ttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacg 498 |||||| ||||| ||||||||||| ||||| || || || |||||| ||||||||||| Sbjct: 1444 ttcttgatcatggacatcgaagaacgcacgtacttcagccagaatggaatcgaatggacg 1385 Query: 499 agtcttcagaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgt 558 |||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1384 agtcttcagaccacatggagccttgatggtgtttccatgcatgggatcagtaatccatgt 1325 Query: 559 gacaatctgtcca 571 ||||||||||||| Sbjct: 1324 gacaatctgtcca 1312
>gb|BT009164.1| Triticum aestivum clone wl1n.pk0095.a10:fis, full insert mRNA sequence Length = 1165 Score = 387 bits (195), Expect = e-104 Identities = 327/371 (88%) Strand = Plus / Minus Query: 201 agaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctcttcc 260 ||||||||| ||| |||||||||||| || || |||| || || |||||||||||||| Sbjct: 802 agaaagccagtggcggcagtggcaggctgctgttgagccccgatcgcatcctcctcttcc 743 Query: 261 tgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgggt 320 | || ||||| ||||| || || ||||||||||| ||||| || |||||||||||||||| Sbjct: 742 tcagcctctctgcgatgataaaggcgagctccagggactgggaggcattcagccttgggt 683 Query: 321 cgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccga 380 ||||||| |||||||||||||| | ||| || ||||||||||||||||| |||||||||| Sbjct: 682 cgcagtgggtgtggtagcggtcgctcagatcgtcgaaggtcacggtccgtgatccaccga 623 Query: 381 tgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcctt 440 |||||||||| || ||||| ||||||||||||||||||| ||| || ||||||||||||| Sbjct: 622 tgcactcggtcacattctgcccagtcatttcaaggtggacgcccccagggtggcttcctt 563 Query: 441 cttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacgag 500 |||||||||||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 562 cttggtcatgcacatcgaagaaggcacgcacttcagccagaatggagtcaaatggacgag 503 Query: 501 tcttcagaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgtga 560 ||||||| ||||| |||||||||||||||||||| ||||| || |||||||||||||||| Sbjct: 502 tcttcagcccacaaggggccttgatggtgtttccatgcataggatcagtaatccatgtga 443 Query: 561 caatctgtcca 571 ||||| ||||| Sbjct: 442 caatcagtcca 432
>gb|AY103635.1| Zea mays PCO124295 mRNA sequence Length = 2074 Score = 387 bits (195), Expect = e-104 Identities = 327/371 (88%) Strand = Plus / Minus Query: 201 agaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctcttcc 260 ||||||||| ||| |||||||||||| || || |||| || || |||||||||||||| Sbjct: 1687 agaaagccagtggcggcagtggcaggctgctgttgagccccgatcgcatcctcctcttcc 1628 Query: 261 tgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgggt 320 | || ||||| ||||| || || ||||||||||| ||||| || |||||||||||||||| Sbjct: 1627 tcagcctctctgcgatgataaaggcgagctccagggactgggaggcattcagccttgggt 1568 Query: 321 cgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccga 380 ||||||| |||||||||||||| | ||| || ||||||||||||||||| |||||||||| Sbjct: 1567 cgcagtgggtgtggtagcggtcgctcagatcgtcgaaggtcacggtccgtgatccaccga 1508 Query: 381 tgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcctt 440 |||||||||| || ||||| ||||||||||||||||||| ||| || ||||||||||||| Sbjct: 1507 tgcactcggtcacattctgcccagtcatttcaaggtggacgcccccagggtggcttcctt 1448 Query: 441 cttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacgag 500 |||||||||||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 1447 cttggtcatgcacatcgaagaaggcacgcacttcagccagaatggagtcaaatggacgag 1388 Query: 501 tcttcagaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgtga 560 ||||||| ||||| |||||||||||||||||||| ||||| || |||||||||||||||| Sbjct: 1387 tcttcaggccacaaggggccttgatggtgtttccatgcataggatcagtaatccatgtga 1328 Query: 561 caatctgtcca 571 ||||| ||||| Sbjct: 1327 caatcagtcca 1317
>ref|XM_470798.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2016 Score = 349 bits (176), Expect = 6e-93 Identities = 287/324 (88%) Strand = Plus / Minus Query: 248 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 307 |||||| || |||| || ||||||||||| ||||| | ||||||||| ||||| ||||| Sbjct: 1676 atcctcttcctcctcagcctctcggcgatgatgaaggagagctccagcgactgggacgcg 1617 Query: 308 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 367 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1616 ttcagcctcgggtcgcagtgggtgtggtagcggtcacccaggtcatcgaaggtgacggtt 1557 Query: 368 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 427 || ||||| ||||||||||||||||||||||| |||||||| || ||||||| |||||| Sbjct: 1556 cgggatccgccgatgcactcggttacgttctgcccagtcatctcgaggtggacacctcct 1497 Query: 428 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggag 487 ||||||||||||||||| |||||||||||||||||||| || |||||| || ||||||| Sbjct: 1496 gggtggcttccttcttgatcatgcacatcgaagaatgctcgtacctcggccagaatggag 1437 Query: 488 tcgaatggacgagtcttcagaccacatggggccttgatggtgtttccgtgcatggggtca 547 || || || || |||||||||||||| || |||||||||||||| |||||||| || ||| Sbjct: 1436 tcaaaggggcgtgtcttcagaccacaaggagccttgatggtgttcccgtgcattggatca 1377 Query: 548 gtaatccatgtgacaatctgtcca 571 ||||||||||||||||| |||||| Sbjct: 1376 gtaatccatgtgacaatttgtcca 1353
>dbj|AK061085.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-G01, full insert sequence Length = 1463 Score = 349 bits (176), Expect = 6e-93 Identities = 287/324 (88%) Strand = Plus / Minus Query: 248 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 307 |||||| || |||| || ||||||||||| ||||| | ||||||||| ||||| ||||| Sbjct: 1128 atcctcttcctcctcagcctctcggcgatgatgaaggagagctccagcgactgggacgcg 1069 Query: 308 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 367 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1068 ttcagcctcgggtcgcagtgggtgtggtagcggtcacccaggtcatcgaaggtgacggtt 1009 Query: 368 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 427 || ||||| ||||||||||||||||||||||| |||||||| || ||||||| |||||| Sbjct: 1008 cgggatccgccgatgcactcggttacgttctgcccagtcatctcgaggtggacacctcct 949 Query: 428 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggag 487 ||||||||||||||||| |||||||||||||||||||| || |||||| || ||||||| Sbjct: 948 gggtggcttccttcttgatcatgcacatcgaagaatgctcgtacctcggccagaatggag 889 Query: 488 tcgaatggacgagtcttcagaccacatggggccttgatggtgtttccgtgcatggggtca 547 || || || || |||||||||||||| || |||||||||||||| |||||||| || ||| Sbjct: 888 tcaaaggggcgtgtcttcagaccacaaggagccttgatggtgttcccgtgcattggatca 829 Query: 548 gtaatccatgtgacaatctgtcca 571 ||||||||||||||||| |||||| Sbjct: 828 gtaatccatgtgacaatttgtcca 805
>dbj|AK059247.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G06, full insert sequence Length = 1635 Score = 349 bits (176), Expect = 6e-93 Identities = 287/324 (88%) Strand = Plus / Minus Query: 248 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 307 |||||| || |||| || ||||||||||| ||||| | ||||||||| ||||| ||||| Sbjct: 1303 atcctcttcctcctcagcctctcggcgatgatgaaggagagctccagcgactgggacgcg 1244 Query: 308 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 367 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1243 ttcagcctcgggtcgcagtgggtgtggtagcggtcacccaggtcatcgaaggtgacggtt 1184 Query: 368 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 427 || ||||| ||||||||||||||||||||||| |||||||| || ||||||| |||||| Sbjct: 1183 cgggatccgccgatgcactcggttacgttctgcccagtcatctcgaggtggacacctcct 1124 Query: 428 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggag 487 ||||||||||||||||| |||||||||||||||||||| || |||||| || ||||||| Sbjct: 1123 gggtggcttccttcttgatcatgcacatcgaagaatgctcgtacctcggccagaatggag 1064 Query: 488 tcgaatggacgagtcttcagaccacatggggccttgatggtgtttccgtgcatggggtca 547 || || || || |||||||||||||| || |||||||||||||| |||||||| || ||| Sbjct: 1063 tcaaaggggcgtgtcttcagaccacaaggagccttgatggtgttcccgtgcattggatca 1004 Query: 548 gtaatccatgtgacaatctgtcca 571 ||||||||||||||||| |||||| Sbjct: 1003 gtaatccatgtgacaatttgtcca 980
>dbj|AK069083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009C02, full insert sequence Length = 2173 Score = 333 bits (168), Expect = 4e-88 Identities = 267/300 (89%) Strand = Plus / Minus Query: 272 gcgataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtg 331 ||||| ||||| ||||||||||| || || ||||| |||||||||||||| ||||| ||| Sbjct: 1611 gcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgggtcacagtgggtg 1552 Query: 332 tggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcactcggtt 391 ||||||||||| | ||||||||||||||| ||||||| |||||||||||||| || || Sbjct: 1551 tggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccaccgatgcattcagtc 1492 Query: 392 acgttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttggtcatgc 451 |||||||| ||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 1491 acgttctgcccagtcatttccaggtggatacctcctgggtggctaccttcttgatcatgg 1432 Query: 452 acatcgaagaatgcacgcacctcgttcataatggagtcgaatggacgagtcttcagacca 511 ||||||||||| ||||| || || || |||||| |||||||||||||||||||||||| Sbjct: 1431 acatcgaagaacgcacgtacttcagccagaatggaatcgaatggacgagtcttcagacca 1372 Query: 512 catggggccttgatggtgtttccgtgcatggggtcagtaatccatgtgacaatctgtcca 571 ||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 1371 catggagccttgatggtgtttccatgcatgggatcagtaatccatgtgacaatctgtcca 1312
>dbj|AB122057.1| Oryza sativa (japonica cultivar-group) DAHPS1 mRNA for 3-deoxy-D-arabino heptulosonate-7-phosphate synthase, complete cds Length = 2059 Score = 325 bits (164), Expect = 9e-86 Identities = 271/306 (88%), Gaps = 3/306 (0%) Strand = Plus / Minus Query: 266 ctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcag 325 ||||||||||| ||||| | ||||||||| ||||| ||||| |||||||| ||||||||| Sbjct: 1706 ctctcggcgatgatgaaggagagctccagcgactgggacgcgttcagcctcgggtcgcag 1647 Query: 326 tgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcac 385 || |||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||| Sbjct: 1646 tgggtgtggtagcggtcacccaggtcatcgaaggtgacggttcgggatccgccgatgcac 1587 Query: 386 tcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttgg 445 |||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||| Sbjct: 1586 tcggttacgttctgcccagtcatctcgaggtggacacctcctgggtggcttccttcttga 1527 Query: 446 tcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacgagtcttc 505 |||||||||||||||||||| || |||||| ||||||||| || || || |||||| Sbjct: 1526 tcatgcacatcgaagaatgctcgtacctcg---gcaatggagtcaaaggggcgtgtcttc 1470 Query: 506 agaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgtgacaatc 565 |||||||| || |||||||||||||| |||||||| || |||||||||||||||||||| Sbjct: 1469 agaccacaaggagccttgatggtgttcccgtgcattggatcagtaatccatgtgacaatt 1410 Query: 566 tgtcca 571 |||||| Sbjct: 1409 tgtcca 1404
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 266 bits (134), Expect = 7e-68 Identities = 236/270 (87%) Strand = Plus / Plus Query: 199 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 258 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 25673140 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 25673199 Query: 259 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 318 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 25673200 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 25673259 Query: 319 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 378 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 25673260 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 25673319 Query: 379 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 438 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 25673320 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 25673379 Query: 439 ttcttggtcatgcacatcgaagaatgcacg 468 |||||| ||||| ||||||||||| ||||| Sbjct: 25673380 ttcttgatcatggacatcgaagaacgcacg 25673409 Score = 149 bits (75), Expect = 1e-32 Identities = 87/91 (95%) Strand = Plus / Plus Query: 481 aatggagtcgaatggacgagtcttcagaccacatggggccttgatggtgtttccgtgcat 540 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 25673840 aatggaatcgaatggacgagtcttcagaccacatggagccttgatggtgtttccatgcat 25673899 Query: 541 ggggtcagtaatccatgtgacaatctgtcca 571 ||| ||||||||||||||||||||||||||| Sbjct: 25673900 gggatcagtaatccatgtgacaatctgtcca 25673930 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 tcaaaaataaaacaagaaaca 22 ||||||||||||||||||||| Sbjct: 6001727 tcaaaaataaaacaagaaaca 6001747
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 266 bits (134), Expect = 7e-68 Identities = 236/270 (87%) Strand = Plus / Plus Query: 199 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 258 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 127113 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 127172 Query: 259 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 318 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 127173 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 127232 Query: 319 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 378 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 127233 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 127292 Query: 379 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 438 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 127293 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 127352 Query: 439 ttcttggtcatgcacatcgaagaatgcacg 468 |||||| ||||| ||||||||||| ||||| Sbjct: 127353 ttcttgatcatggacatcgaagaacgcacg 127382 Score = 149 bits (75), Expect = 1e-32 Identities = 87/91 (95%) Strand = Plus / Plus Query: 481 aatggagtcgaatggacgagtcttcagaccacatggggccttgatggtgtttccgtgcat 540 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 127813 aatggaatcgaatggacgagtcttcagaccacatggagccttgatggtgtttccatgcat 127872 Query: 541 ggggtcagtaatccatgtgacaatctgtcca 571 ||| ||||||||||||||||||||||||||| Sbjct: 127873 gggatcagtaatccatgtgacaatctgtcca 127903
>dbj|AB122082.1| Oryza sativa (japonica cultivar-group) DAHPS2 gene for 3-deoxy-D-arabino heptulosonate-7-phosphate synthase, exon 1-5, complete cds Length = 5967 Score = 266 bits (134), Expect = 7e-68 Identities = 236/270 (87%) Strand = Plus / Minus Query: 199 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 258 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 5662 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 5603 Query: 259 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 318 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 5602 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 5543 Query: 319 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 378 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 5542 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 5483 Query: 379 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 438 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 5482 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 5423 Query: 439 ttcttggtcatgcacatcgaagaatgcacg 468 |||||| ||||| ||||||||||| ||||| Sbjct: 5422 ttcttgatcatggacatcgaagaacgcacg 5393 Score = 149 bits (75), Expect = 1e-32 Identities = 87/91 (95%) Strand = Plus / Minus Query: 481 aatggagtcgaatggacgagtcttcagaccacatggggccttgatggtgtttccgtgcat 540 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 4962 aatggaatcgaatggacgagtcttcagaccacatggagccttgatggtgtttccatgcat 4903 Query: 541 ggggtcagtaatccatgtgacaatctgtcca 571 ||| ||||||||||||||||||||||||||| Sbjct: 4902 gggatcagtaatccatgtgacaatctgtcca 4872
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 262 bits (132), Expect = 1e-66 Identities = 204/228 (89%) Strand = Plus / Minus Query: 248 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 307 |||||| || |||| || ||||||||||| ||||| | ||||||||| ||||| ||||| Sbjct: 15446548 atcctcttcctcctcagcctctcggcgatgatgaaggagagctccagcgactgggacgcg 15446489 Query: 308 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 367 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 15446488 ttcagcctcgggtcgcagtgggtgtggtagcggtcacccaggtcatcgaaggtgacggtt 15446429 Query: 368 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 427 || ||||| ||||||||||||||||||||||| |||||||| || ||||||| |||||| Sbjct: 15446428 cgggatccgccgatgcactcggttacgttctgcccagtcatctcgaggtggacacctcct 15446369 Query: 428 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcg 475 ||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 15446368 gggtggcttccttcttgatcatgcacatcgaagaatgctcgtacctcg 15446321 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 481 aatggagtcgaatggacgagtcttcagaccacatggggccttgatggtgtttccgtgcat 540 ||||||||| || || || |||||||||||||| || |||||||||||||| |||||||| Sbjct: 15444868 aatggagtcaaaggggcgtgtcttcagaccacaaggagccttgatggtgttcccgtgcat 15444809 Query: 541 ggggtcagtaatccatgtgacaatctgtcca 571 || |||||||||||||||||||| |||||| Sbjct: 15444808 tggatcagtaatccatgtgacaatttgtcca 15444778
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 262 bits (132), Expect = 1e-66 Identities = 204/228 (89%) Strand = Plus / Plus Query: 248 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 307 |||||| || |||| || ||||||||||| ||||| | ||||||||| ||||| ||||| Sbjct: 54978 atcctcttcctcctcagcctctcggcgatgatgaaggagagctccagcgactgggacgcg 55037 Query: 308 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 367 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 55038 ttcagcctcgggtcgcagtgggtgtggtagcggtcacccaggtcatcgaaggtgacggtt 55097 Query: 368 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 427 || ||||| ||||||||||||||||||||||| |||||||| || ||||||| |||||| Sbjct: 55098 cgggatccgccgatgcactcggttacgttctgcccagtcatctcgaggtggacacctcct 55157 Query: 428 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcg 475 ||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 55158 gggtggcttccttcttgatcatgcacatcgaagaatgctcgtacctcg 55205 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 481 aatggagtcgaatggacgagtcttcagaccacatggggccttgatggtgtttccgtgcat 540 ||||||||| || || || |||||||||||||| || |||||||||||||| |||||||| Sbjct: 56658 aatggagtcaaaggggcgtgtcttcagaccacaaggagccttgatggtgttcccgtgcat 56717 Query: 541 ggggtcagtaatccatgtgacaatctgtcca 571 || |||||||||||||||||||| |||||| Sbjct: 56718 tggatcagtaatccatgtgacaatttgtcca 56748
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 262 bits (132), Expect = 1e-66 Identities = 204/228 (89%) Strand = Plus / Minus Query: 248 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 307 |||||| || |||| || ||||||||||| ||||| | ||||||||| ||||| ||||| Sbjct: 15441082 atcctcttcctcctcagcctctcggcgatgatgaaggagagctccagcgactgggacgcg 15441023 Query: 308 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 367 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 15441022 ttcagcctcgggtcgcagtgggtgtggtagcggtcacccaggtcatcgaaggtgacggtt 15440963 Query: 368 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 427 || ||||| ||||||||||||||||||||||| |||||||| || ||||||| |||||| Sbjct: 15440962 cgggatccgccgatgcactcggttacgttctgcccagtcatctcgaggtggacacctcct 15440903 Query: 428 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcg 475 ||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 15440902 gggtggcttccttcttgatcatgcacatcgaagaatgctcgtacctcg 15440855 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 481 aatggagtcgaatggacgagtcttcagaccacatggggccttgatggtgtttccgtgcat 540 ||||||||| || || || |||||||||||||| || |||||||||||||| |||||||| Sbjct: 15439402 aatggagtcaaaggggcgtgtcttcagaccacaaggagccttgatggtgttcccgtgcat 15439343 Query: 541 ggggtcagtaatccatgtgacaatctgtcca 571 || |||||||||||||||||||| |||||| Sbjct: 15439342 tggatcagtaatccatgtgacaatttgtcca 15439312
>dbj|AB122083.1| Oryza sativa (japonica cultivar-group) DAHPS1 gene for 3-deoxy-D-arabino heptulosonate-7-phosphate synthase, exon 1-5, complete cds Length = 7765 Score = 258 bits (130), Expect = 2e-65 Identities = 190/210 (90%) Strand = Plus / Minus Query: 266 ctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcag 325 ||||||||||| ||||| | ||||||||| ||||| ||||| |||||||| ||||||||| Sbjct: 6947 ctctcggcgatgatgaaggagagctccagcgactgggacgcgttcagcctcgggtcgcag 6888 Query: 326 tgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcac 385 || |||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||| Sbjct: 6887 tgggtgtggtagcggtcacccaggtcatcgaaggtgacggttcgggatccgccgatgcac 6828 Query: 386 tcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttgg 445 |||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||| Sbjct: 6827 tcggttacgttctgcccagtcatctcgaggtggacacctcctgggtggcttccttcttga 6768 Query: 446 tcatgcacatcgaagaatgcacgcacctcg 475 |||||||||||||||||||| || |||||| Sbjct: 6767 tcatgcacatcgaagaatgctcgtacctcg 6738 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 481 aatggagtcgaatggacgagtcttcagaccacatggggccttgatggtgtttccgtgcat 540 ||||||||| || || || |||||||||||||| || |||||||||||||| |||||||| Sbjct: 5285 aatggagtcaaaggggcgtgtcttcagaccacaaggagccttgatggtgttcccgtgcat 5226 Query: 541 ggggtcagtaatccatgtgacaatctgtcca 571 || |||||||||||||||||||| |||||| Sbjct: 5225 tggatcagtaatccatgtgacaatttgtcca 5195
>gb|AF457957.1| Zea mays clone csi1.pk0011.e4, mRNA sequence Length = 447 Score = 161 bits (81), Expect = 3e-36 Identities = 124/137 (90%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 435 ttccttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatg 494 |||||||||||||||||||||||||||| |||||||| || || ||||||||| |||| Sbjct: 413 ttccttcttggtcatgcacatcgaagaa-gcacgcacttcagccagaatggagtcaaatg 355 Query: 495 gacgagtcttcagaccacatggggccttgatggtgtttccgtgcatggggtcagtaatcc 554 ||||||||||||| ||||| |||||||||||||||||||| ||||| || |||||||||| Sbjct: 354 gacgagtcttcaggccacaaggggccttgatggtgtttccatgcataggatcagtaatcc 295 Query: 555 atgtgacaatctgtcca 571 ||||||||||| ||||| Sbjct: 294 atgtgacaatcagtcca 278
>ref|NM_102090.2| Arabidopsis thaliana 3-deoxy-7-phosphoheptulonate synthase AT1G22410 mRNA, complete cds Length = 1911 Score = 149 bits (75), Expect = 1e-32 Identities = 246/303 (81%) Strand = Plus / Minus Query: 269 tcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtga 328 |||||||| ||||| | |||||| ||||||||||| ||||| || | || || ||||| Sbjct: 1601 tcggcgatgatgaaggagagctcaagagactgtgaagcattaaggcgaggatcacagtgc 1542 Query: 329 gtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcactcg 388 |||||||| || ||||| ||| ||||| || || || || || ||||||||||||||| Sbjct: 1541 gtgtggtaacgtgaacccaagtcgtcgaatgtgactgtgcgtgaaccaccgatgcactcg 1482 Query: 389 gttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttggtca 448 || |||||||| ||||||||||| ||||| || ||||| |||||||| |||||||| || Sbjct: 1481 gtcacgttctgaccagtcatttctaggtgaattcctccggggtggctaccttcttgctcg 1422 Query: 449 tgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacgagtcttcaga 508 ||||| |||||||| || | ||| || || |||| ||| || ||||||||||| ||| Sbjct: 1421 tgcacgtcgaagaaagctctcacttcagccaagatggcgtcaaagggacgagtcttgaga 1362 Query: 509 ccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgtgacaatctgt 568 ||||| || ||||| ||||||||||||||||| || ||| | | ||| || ||||||||| Sbjct: 1361 ccacaaggagccttaatggtgtttccgtgcattggatcactgacccaagtcacaatctgt 1302 Query: 569 cca 571 ||| Sbjct: 1301 cca 1299
>dbj|AB061254.1| Solanum tuberosum mRNA for 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, complete cds Length = 1929 Score = 121 bits (61), Expect = 3e-24 Identities = 217/269 (80%) Strand = Plus / Minus Query: 272 gcgataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtg 331 ||||||||||| | |||||| || || || || ||||| ||||| || || ||||||||| Sbjct: 1645 gcgataatgaacgagagctcaagggattgagatgcattgagcctaggatcacagtgagtg 1586 Query: 332 tggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcactcggtt 391 ||||| || | ||| ||||| |||||||| || || ||||||||||||||||| || Sbjct: 1585 tggtaacgtgagctcagatcatcaaaggtcacagttcgtgatccaccgatgcactctgtg 1526 Query: 392 acgttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttggtcatgc 451 ||||| || || ||||| || || || | ||||||||||||||||||||||| ||||| Sbjct: 1525 acgttttggcctgtcatctccagatgaactcctcctgggtggcttccttcttgatcatga 1466 Query: 452 acatcgaagaatgcacgcacctcgttcataatggagtcgaatggacgagtcttcagacca 511 ||||| |||||||| | |||||| | | ||||| || || || ||||| || |||||| Sbjct: 1465 acatcaaagaatgctcttacctcggccctgatggaatcaaaaggtcgagtttttagacca 1406 Query: 512 catggggccttgatggtgtttccgtgcat 540 || || ||||||||||| ||||||||||| Sbjct: 1405 caaggagccttgatggtatttccgtgcat 1377
>ref|XM_483024.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1746 Score = 117 bits (59), Expect = 4e-23 Identities = 185/227 (81%) Strand = Plus / Minus Query: 248 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 307 ||||||||||| ||||| | ||||||||| ||||| || | |||||||||||| || || Sbjct: 1481 atcctcctctttctgagccgctcggcgatgatgaacgccaactccagagactgcgatgcg 1422 Query: 308 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 367 || ||||| ||||||||||| |||||||| || ||||| || ||||| ||||| || Sbjct: 1421 ttgagcctcgggtcgcagtgtgtgtggtatcgtgagcccagatcgtcgaatgtcaccgtg 1362 Query: 368 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 427 || || || |||||||| || || || || ||||||||||| || || || | |||||| Sbjct: 1361 cgtgacccgccgatgcattctgtcacattttgtccagtcatctccagatgcacccctcct 1302 Query: 428 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctc 474 |||||||| |||||||| || |||||||| |||||||| |||||||| Sbjct: 1301 gggtggctgccttcttgttcgtgcacatcaaagaatgcgcgcacctc 1255
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 117 bits (59), Expect = 4e-23 Identities = 185/227 (81%) Strand = Plus / Plus Query: 248 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 307 ||||||||||| ||||| | ||||||||| ||||| || | |||||||||||| || || Sbjct: 23927883 atcctcctctttctgagccgctcggcgatgatgaacgccaactccagagactgcgatgcg 23927942 Query: 308 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 367 || ||||| ||||||||||| |||||||| || ||||| || ||||| ||||| || Sbjct: 23927943 ttgagcctcgggtcgcagtgtgtgtggtatcgtgagcccagatcgtcgaatgtcaccgtg 23928002 Query: 368 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 427 || || || |||||||| || || || || ||||||||||| || || || | |||||| Sbjct: 23928003 cgtgacccgccgatgcattctgtcacattttgtccagtcatctccagatgcacccctcct 23928062 Query: 428 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctc 474 |||||||| |||||||| || |||||||| |||||||| |||||||| Sbjct: 23928063 gggtggctgccttcttgttcgtgcacatcaaagaatgcgcgcacctc 23928109
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 117 bits (59), Expect = 4e-23 Identities = 185/227 (81%) Strand = Plus / Plus Query: 248 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 307 ||||||||||| ||||| | ||||||||| ||||| || | |||||||||||| || || Sbjct: 61034 atcctcctctttctgagccgctcggcgatgatgaacgccaactccagagactgcgatgcg 61093 Query: 308 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 367 || ||||| ||||||||||| |||||||| || ||||| || ||||| ||||| || Sbjct: 61094 ttgagcctcgggtcgcagtgtgtgtggtatcgtgagcccagatcgtcgaatgtcaccgtg 61153 Query: 368 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 427 || || || |||||||| || || || || ||||||||||| || || || | |||||| Sbjct: 61154 cgtgacccgccgatgcattctgtcacattttgtccagtcatctccagatgcacccctcct 61213 Query: 428 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctc 474 |||||||| |||||||| || |||||||| |||||||| |||||||| Sbjct: 61214 gggtggctgccttcttgttcgtgcacatcaaagaatgcgcgcacctc 61260
>dbj|AK106196.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E11, full insert sequence Length = 1175 Score = 117 bits (59), Expect = 4e-23 Identities = 185/227 (81%) Strand = Plus / Minus Query: 248 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 307 ||||||||||| ||||| | ||||||||| ||||| || | |||||||||||| || || Sbjct: 922 atcctcctctttctgagccgctcggcgatgatgaacgccaactccagagactgcgatgcg 863 Query: 308 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 367 || ||||| ||||||||||| |||||||| || ||||| || ||||| ||||| || Sbjct: 862 ttgagcctcgggtcgcagtgtgtgtggtatcgtgagcccagatcgtcgaatgtcaccgtg 803 Query: 368 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 427 || || || |||||||| || || || || ||||||||||| || || || | |||||| Sbjct: 802 cgtgacccgccgatgcattctgtcacattttgtccagtcatctccagatgcacccctcct 743 Query: 428 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctc 474 |||||||| |||||||| || |||||||| |||||||| |||||||| Sbjct: 742 gggtggctgccttcttgttcgtgcacatcaaagaatgcgcgcacctc 696
>dbj|AK070359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054B06, full insert sequence Length = 1746 Score = 117 bits (59), Expect = 4e-23 Identities = 185/227 (81%) Strand = Plus / Minus Query: 248 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 307 ||||||||||| ||||| | ||||||||| ||||| || | |||||||||||| || || Sbjct: 1481 atcctcctctttctgagccgctcggcgatgatgaacgccaactccagagactgcgatgcg 1422 Query: 308 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 367 || ||||| ||||||||||| |||||||| || ||||| || ||||| ||||| || Sbjct: 1421 ttgagcctcgggtcgcagtgtgtgtggtatcgtgagcccagatcgtcgaatgtcaccgtg 1362 Query: 368 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 427 || || || |||||||| || || || || ||||||||||| || || || | |||||| Sbjct: 1361 cgtgacccgccgatgcattctgtcacattttgtccagtcatctccagatgcacccctcct 1302 Query: 428 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctc 474 |||||||| |||||||| || |||||||| |||||||| |||||||| Sbjct: 1301 gggtggctgccttcttgttcgtgcacatcaaagaatgcgcgcacctc 1255
>gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12K8 genomic sequence, complete sequence Length = 107200 Score = 115 bits (58), Expect = 2e-22 Identities = 160/194 (82%) Strand = Plus / Plus Query: 269 tcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtga 328 |||||||| ||||| | |||||| ||||||||||| ||||| || | || || ||||| Sbjct: 93342 tcggcgatgatgaaggagagctcaagagactgtgaagcattaaggcgaggatcacagtgc 93401 Query: 329 gtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcactcg 388 |||||||| || ||||| ||| ||||| || || || || || ||||||||||||||| Sbjct: 93402 gtgtggtaacgtgaacccaagtcgtcgaatgtgactgtgcgtgaaccaccgatgcactcg 93461 Query: 389 gttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttggtca 448 || |||||||| ||||||||||| ||||| || ||||| |||||||| |||||||| || Sbjct: 93462 gtcacgttctgaccagtcatttctaggtgaattcctccggggtggctaccttcttgctcg 93521 Query: 449 tgcacatcgaagaa 462 ||||| |||||||| Sbjct: 93522 tgcacgtcgaagaa 93535 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 494 ggacgagtcttcagaccacatggggccttgatggtgtttccgtgcatggggtcagtaatc 553 ||||||||||| |||||||| || ||||| ||||||||||||||||| || ||| | | | Sbjct: 93968 ggacgagtcttgagaccacaaggagccttaatggtgtttccgtgcattggatcactgacc 94027 Query: 554 catgtgacaatctgtcca 571 || || |||||||||||| Sbjct: 94028 caagtcacaatctgtcca 94045
>gb|J05191.1|POTARO1A S.tuberosum 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (aro1) mRNA, complete cds Length = 1784 Score = 109 bits (55), Expect = 1e-20 Identities = 157/191 (82%) Strand = Plus / Minus Query: 350 tcatcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatt 409 ||||| |||||||| || || ||||||||||||||||| || ||||| || || ||||| Sbjct: 1513 tcatcaaaggtcacagttcgtgatccaccgatgcactctgtgacgttttggcctgtcatc 1454 Query: 410 tcaaggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgcacgc 469 || || || | ||||||||||||||||||||||| ||||| ||||| |||||||| | Sbjct: 1453 tccagatgaactcctcctgggtggcttccttcttgatcatgaacatcaaagaatgctctt 1394 Query: 470 acctcgttcataatggagtcgaatggacgagtcttcagaccacatggggccttgatggtg 529 |||||| | | ||||| || || || ||||| || |||||||| || ||||||||||| Sbjct: 1393 acctcggccctgatggaatcaaaaggtcgagtttttagaccacaaggagccttgatggta 1334 Query: 530 tttccgtgcat 540 ||||||||||| Sbjct: 1333 tttccgtgcat 1323
>gb|DQ166521.1| Fagus sylvatica putative 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 3 mRNA, complete cds Length = 1989 Score = 107 bits (54), Expect = 4e-20 Identities = 231/290 (79%) Strand = Plus / Minus Query: 275 ataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtgg 334 |||||||| || ||||| ||||| ||||| ||||| ||||| ||||| ||||| |||||| Sbjct: 1712 ataatgaaggcaagctcaagagattgtgaagcattgagcctagggtcacagtgggtgtgg 1653 Query: 335 tagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcactcggttacg 394 || || || |||||||| || ||||| || || || ||||| |||||||| || ||| Sbjct: 1652 taacgtgaacttaggtcatcaaaagtcaccgttcgtgacccaccaatgcactctgtcacg 1593 Query: 395 ttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttggtcatgcaca 454 ||||| || ||||| || | || | ||||| || |||||||||||||||||||||||| Sbjct: 1592 ttctggcctgtcatctctaaatgaactcctccaggatggcttccttcttggtcatgcaca 1533 Query: 455 tcgaagaatgcacgcacctcgttcataatggagtcgaatggacgagtcttcagaccacat 514 || ||||| || | |||||| | | |||| ||||| || ||||| |||||||| || Sbjct: 1532 tcaaagaacgctctcacctccgccctgatggcatcgaaggggcgagttttcagaccgcag 1473 Query: 515 ggggccttgatggtgtttccgtgcatggggtcagtaatccatgtgacaat 564 || ||||| || |||||||| ||||| || ||| ||| |||||||||||| Sbjct: 1472 ggagcctttatagtgtttccatgcataggatcactaacccatgtgacaat 1423
>emb|Z21793.1|LEDAHPSNB L.esculentum DAHP synthase 2 precursor Length = 1916 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Minus Query: 272 gcgataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtg 331 ||||||||||| | |||||| || || || || ||||| ||||| || || ||||||||| Sbjct: 1664 gcgataatgaatgagagctcaagggattgagatgcattgagcctaggatcacagtgagtg 1605 Query: 332 tggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcactcggtt 391 ||||| || | ||| ||||| |||||||| || || |||||||| |||||||| || Sbjct: 1604 tggtaacgtgagctcagatcatcaaaggtcacagttcgtgatccaccaatgcactctgtg 1545 Query: 392 acgttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttggtcatgc 451 ||||| || || ||||| ||||| || | ||||||||||||||||||||||| ||||| Sbjct: 1544 acgttttggcctgtcatctcaagatgaactcctcctgggtggcttccttcttgatcatga 1485 Query: 452 acatcgaagaatgcacgcacctcgttcataatggagtcgaatggacgagtcttcagacca 511 ||||| |||||||| | ||||| | | ||||| || || || ||||| || ||||| Sbjct: 1484 acatcaaagaatgctcttacctcagccctgatggaatcaaaaggtcgagtttttagaccg 1425 Query: 512 catggggccttgatggtgtttccgtgcat 540 ||||| || |||||||| ||||||||||| Sbjct: 1424 catggagctttgatggtatttccgtgcat 1396
>ref|NM_120162.2| Arabidopsis thaliana DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1); 3-deoxy-7-phosphoheptulonate synthase AT4G39980 (DHS1) mRNA, complete cds Length = 1912 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 293 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 352 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 1584 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 1525 Query: 353 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 412 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 1524 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 1465 Query: 413 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 465 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 1464 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 1412
>gb|BT000821.1| Arabidopsis thaliana 2-dehydro-3-deoxyphosphoheptonate aldolase (At4g39980/T5J17_150) mRNA, complete cds Length = 1578 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 293 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 352 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 1511 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 1452 Query: 353 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 412 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 1451 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 1392 Query: 413 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 465 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 1391 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 1339
>emb|AL161596.2|ATCHRIV92 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 92 Length = 112067 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 293 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 352 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 68784 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 68725 Query: 353 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 412 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 68724 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 68665 Query: 413 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 465 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 68664 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 68612
>emb|AL035708.2|ATT5J17 Arabidopsis thaliana DNA chromosome 4, BAC clone T5J17 (ESSA project) Length = 118267 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 293 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 352 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 79351 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 79292 Query: 353 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 412 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 79291 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 79232 Query: 413 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 465 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 79231 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 79179
>gb|AY140052.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 1856 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 293 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 352 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 1584 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 1525 Query: 353 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 412 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 1524 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 1465 Query: 413 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 465 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 1464 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 1412
>gb|AY090349.1| Arabidopsis thaliana AT4g39980/T5J17_150 mRNA, complete cds Length = 1855 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 293 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 352 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 1584 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 1525 Query: 353 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 412 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 1524 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 1465 Query: 413 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 465 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 1464 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 1412
>emb|BX828843.1|CNS0A2CS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL43ZE06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1819 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 293 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 352 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 1575 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 1516 Query: 353 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 412 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 1515 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 1456 Query: 413 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 465 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 1455 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 1403
>gb|M74819.1|ATHDHS1 A.thaliana 3-deoxy-D-arabino-heptulosonate y-phosphate synthase (DHS1) mRNA, complete cds Length = 1918 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 293 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 352 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 1586 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 1527 Query: 353 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 412 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 1526 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 1467 Query: 413 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 465 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 1466 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 1414
>gb|M64261.1|TOBDAHPS1 Nicotiana tabacum 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, complete cds Length = 1928 Score = 93.7 bits (47), Expect = 6e-16 Identities = 155/191 (81%) Strand = Plus / Minus Query: 275 ataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtgg 334 |||||||| |||||||| || || || || ||||| ||||| || || ||||| |||||| Sbjct: 1654 ataatgaaggcgagctcaagggattgagatgcattgagcctaggatcacagtgggtgtgg 1595 Query: 335 tagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcactcggttacg 394 || || | ||| ||||| |||||||| || || |||||||| |||||||| || ||| Sbjct: 1594 taacgtgagctcagatcatcaaaggtcacagttcgtgatccaccaatgcactctgtgacg 1535 Query: 395 ttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttggtcatgcaca 454 || || || ||||| || ||||| | ||||||||||||||||||||||| ||||| ||| Sbjct: 1534 ttttggcctgtcatctccaggtgtactcctcctgggtggcttccttcttgctcatgaaca 1475 Query: 455 tcgaagaatgc 465 || |||||||| Sbjct: 1474 tcaaagaatgc 1464
>gb|M95201.1|POTSHKB Potato 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (shkB) mRNA, complete cds Length = 1995 Score = 93.7 bits (47), Expect = 6e-16 Identities = 218/275 (79%) Strand = Plus / Minus Query: 293 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 352 |||||||| || ||||||| |||||||| || |||||||||||||| |||| || Sbjct: 1581 agagactgagaagcattcaatcttgggtcacaatgagtgtggtagcgagagcccaaatcg 1522 Query: 353 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 412 || |||| || || || |||||||| |||||||| || || || || || |||||||| Sbjct: 1521 tcataggttactgttcgtgatccaccaatgcactcagtcacattttgccctgtcatttct 1462 Query: 413 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgcacgcacc 472 ||||| || || || ||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 1461 aggtgaataccaccagggtggcttccttcttgctcatgcacatcgaagaaagctcggacc 1402 Query: 473 tcgttcataatggagtcgaatggacgagtcttcagaccacatggggccttgatggtgttt 532 || || || || ||||| | ||| || || || |||||||| ||||||||||| || Sbjct: 1401 tcagccaggattgaatcgaaagcacgggttttgagtccacatggtgccttgatggtattc 1342 Query: 533 ccgtgcatggggtcagtaatccatgtgacaatctg 567 |||||||| || ||| || |||||| |||||||| Sbjct: 1341 ccgtgcattggatcacaaacccatgtcacaatctg 1307
>ref|NM_197776.1| Oryza sativa (japonica cultivar-group) putative 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (OSJNBa0027P10.18), mRNA Length = 1581 Score = 83.8 bits (42), Expect = 6e-13 Identities = 213/270 (78%) Strand = Plus / Minus Query: 296 gactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcg 355 ||||| || ||||||||||| ||||||||||| ||| ||||||| | || ||||| Sbjct: 1493 gactgcgatgcattcagcctggggtcgcagtgcgtgcggtagcgagagctgagatcatca 1434 Query: 356 aaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttcaagg 415 | |||||| ||| |||||||| |||||||| || |||||||| || ||||| || ||| Sbjct: 1433 agggtcaccgtcttggatccaccaatgcactctgtaacgttctgccctgtcatctccagg 1374 Query: 416 tggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcg 475 || || ||||| |||| |||||| ||||| ||||| ||||||||||| || | || |||| Sbjct: 1373 tgaatccctccagggtagcttccctcttgctcatggacatcgaagaaagccctcagctcg 1314 Query: 476 ttcataatggagtcgaatggacgagtcttcagaccacatggggccttgatggtgtttccg 535 | | || | |||||||| | ||||| ||||||||||| || |||||||||| || Sbjct: 1313 cacctgatcgcgtcgaatgatcttgtcttgagaccacatggtgcgctgatggtgttccca 1254 Query: 536 tgcatggggtcagtaatccatgtgacaatc 565 |||||||| ||| | | ||| ||||||||| Sbjct: 1253 tgcatgggatcactgacccaagtgacaatc 1224
>dbj|AK109667.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-A06, full insert sequence Length = 1619 Score = 83.8 bits (42), Expect = 6e-13 Identities = 213/270 (78%) Strand = Plus / Minus Query: 296 gactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcg 355 ||||| || ||||||||||| ||||||||||| ||| ||||||| | || ||||| Sbjct: 1448 gactgcgatgcattcagcctggggtcgcagtgcgtgcggtagcgagagctgagatcatca 1389 Query: 356 aaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttcaagg 415 | |||||| ||| |||||||| |||||||| || |||||||| || ||||| || ||| Sbjct: 1388 agggtcaccgtcttggatccaccaatgcactctgtaacgttctgccctgtcatctccagg 1329 Query: 416 tggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcg 475 || || ||||| |||| |||||| ||||| ||||| ||||||||||| || | || |||| Sbjct: 1328 tgaatccctccagggtagcttccctcttgctcatggacatcgaagaaagccctcagctcg 1269 Query: 476 ttcataatggagtcgaatggacgagtcttcagaccacatggggccttgatggtgtttccg 535 | | || | |||||||| | ||||| ||||||||||| || |||||||||| || Sbjct: 1268 cacctgatcgcgtcgaatgatcttgtcttgagaccacatggtgcgctgatggtgttccca 1209 Query: 536 tgcatggggtcagtaatccatgtgacaatc 565 |||||||| ||| | | ||| ||||||||| Sbjct: 1208 tgcatgggatcactgacccaagtgacaatc 1179
>emb|BX828779.1|CNS0A2IG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL37ZH01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1213 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Minus Query: 293 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 352 ||||||||| |||| |||||||||||||| ||||| |||||||| || || |||||| Sbjct: 1037 agagactgttacgcgttcagccttgggtcacagtgtgtgtggtaacgagaactgaggtca 978 Query: 353 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 412 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 977 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 918 Query: 413 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 465 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 917 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 865
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 77.8 bits (39), Expect = 4e-11 Identities = 135/167 (80%) Strand = Plus / Plus Query: 296 gactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcg 355 ||||| || ||||||||||| ||||||||||| ||| ||||||| | || ||||| Sbjct: 85220 gactgcgatgcattcagcctggggtcgcagtgcgtgcggtagcgagagctgagatcatca 85279 Query: 356 aaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttcaagg 415 | |||||| ||| |||||||| |||||||| || |||||||| || ||||| || ||| Sbjct: 85280 agggtcaccgtcttggatccaccaatgcactctgtaacgttctgccctgtcatctccagg 85339 Query: 416 tggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaa 462 || || ||||| |||| |||||| ||||| ||||| ||||||||||| Sbjct: 85340 tgaatccctccagggtagcttccctcttgctcatggacatcgaagaa 85386 Score = 44.1 bits (22), Expect = 0.50 Identities = 55/66 (83%) Strand = Plus / Plus Query: 500 gtcttcagaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgtg 559 ||||| ||||||||||| || |||||||||| || |||||||| ||| | | ||| ||| Sbjct: 85737 gtcttgagaccacatggtgcgctgatggtgttcccatgcatgggatcactgacccaagtg 85796 Query: 560 acaatc 565 |||||| Sbjct: 85797 acaatc 85802
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 77.8 bits (39), Expect = 4e-11 Identities = 135/167 (80%) Strand = Plus / Plus Query: 296 gactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcg 355 ||||| || ||||||||||| ||||||||||| ||| ||||||| | || ||||| Sbjct: 21770537 gactgcgatgcattcagcctggggtcgcagtgcgtgcggtagcgagagctgagatcatca 21770596 Query: 356 aaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttcaagg 415 | |||||| ||| |||||||| |||||||| || |||||||| || ||||| || ||| Sbjct: 21770597 agggtcaccgtcttggatccaccaatgcactctgtaacgttctgccctgtcatctccagg 21770656 Query: 416 tggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaa 462 || || ||||| |||| |||||| ||||| ||||| ||||||||||| Sbjct: 21770657 tgaatccctccagggtagcttccctcttgctcatggacatcgaagaa 21770703 Score = 44.1 bits (22), Expect = 0.50 Identities = 55/66 (83%) Strand = Plus / Plus Query: 500 gtcttcagaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgtg 559 ||||| ||||||||||| || |||||||||| || |||||||| ||| | | ||| ||| Sbjct: 21771054 gtcttgagaccacatggtgcgctgatggtgttcccatgcatgggatcactgacccaagtg 21771113 Query: 560 acaatc 565 |||||| Sbjct: 21771114 acaatc 21771119
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 77.8 bits (39), Expect = 4e-11 Identities = 135/167 (80%) Strand = Plus / Plus Query: 296 gactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcg 355 ||||| || ||||||||||| ||||||||||| ||| ||||||| | || ||||| Sbjct: 21782200 gactgcgatgcattcagcctggggtcgcagtgcgtgcggtagcgagagctgagatcatca 21782259 Query: 356 aaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttcaagg 415 | |||||| ||| |||||||| |||||||| || |||||||| || ||||| || ||| Sbjct: 21782260 agggtcaccgtcttggatccaccaatgcactctgtaacgttctgccctgtcatctccagg 21782319 Query: 416 tggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaa 462 || || ||||| |||| |||||| ||||| ||||| ||||||||||| Sbjct: 21782320 tgaatccctccagggtagcttccctcttgctcatggacatcgaagaa 21782366 Score = 44.1 bits (22), Expect = 0.50 Identities = 55/66 (83%) Strand = Plus / Plus Query: 500 gtcttcagaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgtg 559 ||||| ||||||||||| || |||||||||| || |||||||| ||| | | ||| ||| Sbjct: 21782717 gtcttgagaccacatggtgcgctgatggtgttcccatgcatgggatcactgacccaagtg 21782776 Query: 560 acaatc 565 |||||| Sbjct: 21782777 acaatc 21782782
>gb|AY150519.1| Vitis vinifera 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase mRNA, partial cds Length = 794 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 248 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 307 ||||| |||||||| || | ||| || ||||||||||||||||| |||||||| || ||| Sbjct: 766 atccttctcttcctaaggcgctctgcaataatgaaagcgagctcaagagactgggaagca 707 Query: 308 ttcagccttgggtcgcagtgagtgtggtagcg 339 || ||||| ||||| || || ||||||||||| Sbjct: 706 ttgagcctagggtcacaatgggtgtggtagcg 675 Score = 69.9 bits (35), Expect = 9e-09 Identities = 116/143 (81%) Strand = Plus / Minus Query: 422 cctcctgggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcgttcata 481 ||||| ||||||||||||||||| |||||||| || |||||||| | || ||| | | Sbjct: 592 cctcccgggtggcttccttcttgctcatgcacgtcaaagaatgctcttacttcggccctg 533 Query: 482 atggagtcgaatggacgagtcttcagaccacatggggccttgatggtgtttccgtgcatg 541 |||| ||||| || ||||| || |||||||| || |||||||| |||||||| ||||| Sbjct: 532 atggcatcgaaggggcgagttttgagaccacagggagccttgatcgtgtttccatgcata 473 Query: 542 gggtcagtaatccatgtgacaat 564 || ||| | | |||||||||||| Sbjct: 472 ggatcactgacccatgtgacaat 450
>emb|BX828152.1|CNS0A29W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH57ZG02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 391 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 293 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 352 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 142 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 83 Query: 353 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcat 408 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| Sbjct: 82 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcat 27
>emb|Z21792.1|LEDAHPSNA L.esculentum DAHP synthase 1 precursor Length = 1695 Score = 69.9 bits (35), Expect = 9e-09 Identities = 215/275 (78%) Strand = Plus / Minus Query: 293 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 352 |||||||| || ||||||| |||||||| || |||||||||||||| |||| || Sbjct: 1493 agagactgagatgcattcaatcttgggtcacaatgagtgtggtagcgagagcccaaatcg 1434 Query: 353 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 412 || |||| || || || |||||||| ||||| || || || || || || ||||||||| Sbjct: 1433 tcataggttactgttcgtgatccaccaatgcattcagtcacattttgccctgtcatttca 1374 Query: 413 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgcacgcacc 472 ||||| || | | ||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 1373 aggtgaatacaccaggggtggcttccttcttgctcatgcacatcgaagaaagctcggacc 1314 Query: 473 tcgttcataatggagtcgaatggacgagtcttcagaccacatggggccttgatggtgttt 532 || | || || ||||| | ||| || || || |||||||| ||||||||||| || Sbjct: 1313 tcagcctggattgaatcgaaagcacgggttttgagtccacatggtgccttgatggtattc 1254 Query: 533 ccgtgcatggggtcagtaatccatgtgacaatctg 567 |||||||| || ||| || |||||| |||||||| Sbjct: 1253 ccgtgcattggatcacaaacccatgtcacaatctg 1219
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 374 ccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcc 423 ||||||||||| ||||| ||||||||||| |||||||||| ||||||||| Sbjct: 4307314 ccaccgatgcattcggtgacgttctgtccggtcatttcaatgtggatgcc 4307265
>emb|Y14797.1|MCY14797 Morinda citrifolia mRNA for 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, DS1 Length = 1923 Score = 65.9 bits (33), Expect = 1e-07 Identities = 129/161 (80%) Strand = Plus / Minus Query: 305 gcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacg 364 ||||| |||||||| || ||||| ||||||||||| ||||||||||| || || || Sbjct: 1631 gcattaagccttggatcacagtgtgtgtggtagcgtgagcccaggtcatcaaatgtaaca 1572 Query: 365 gtccgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcct 424 || || ||||| || ||||| || || || ||||| ||||||||||| | || | || Sbjct: 1571 gtacgagatccgccaatgcattcagtcacattctgaccagtcatttctaaatgaacacca 1512 Query: 425 cctgggtggcttccttcttggtcatgcacatcgaagaatgc 465 ||||||||||| |||||||| ||||| || ||||||||||| Sbjct: 1511 cctgggtggctgccttcttgctcatgtacgtcgaagaatgc 1471
>dbj|D21108.1|RICAD403 Oryza sativa mRNA for 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, partial sequence Length = 381 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 536 tgcatggggtcagtaatccatgtgacaatctgtcca 571 |||||||| ||||||||||||||||||||||||||| Sbjct: 378 tgcatgggatcagtaatccatgtgacaatctgtcca 343
>ref|NM_119505.2| Arabidopsis thaliana DHS2 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE); 3-deoxy-7-phosphoheptulonate synthase AT4G33510 (DHS2) mRNA, complete cds Length = 1821 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 278 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 337 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 1506 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 1447 Query: 338 cg 339 || Sbjct: 1446 cg 1445
>emb|AL161583.2|ATCHRIV79 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 79 Length = 199536 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 278 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 337 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 146571 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 146512 Query: 338 cg 339 || Sbjct: 146511 cg 146510
>emb|AL035678.1|ATF17M5 Arabidopsis thaliana DNA chromosome 4, BAC clone F17M5 (ESSA project) Length = 96475 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 278 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 337 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 81792 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 81733 Query: 338 cg 339 || Sbjct: 81732 cg 81731
>gb|AY124858.1| Arabidopsis thaliana AT4g33510/F17M5_270 mRNA, complete cds Length = 1524 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 278 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 337 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 1457 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 1398 Query: 338 cg 339 || Sbjct: 1397 cg 1396
>gb|AF361798.1| Arabidopsis thaliana AT4g33510/F17M5_270 mRNA, complete cds Length = 1706 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 278 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 337 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 1506 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 1447 Query: 338 cg 339 || Sbjct: 1446 cg 1445
>emb|BX827446.1|CNS0A4BJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS55ZG12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1737 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 278 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 337 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 1504 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 1445 Query: 338 cg 339 || Sbjct: 1444 cg 1443
>gb|AY087659.1| Arabidopsis thaliana clone 37432 mRNA, complete sequence Length = 1736 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 278 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 337 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 1506 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 1447 Query: 338 cg 339 || Sbjct: 1446 cg 1445
>gb|M74820.1|ATHDHS2 A.thaliana 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (DHS2) mRNA, complete cds Length = 1856 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 278 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 337 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 1519 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 1460 Query: 338 cg 339 || Sbjct: 1459 cg 1458
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 374 ccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcc 423 ||||||||||||||||| |||||||| || ||||| || | ||||||||| Sbjct: 4520808 ccaccgatgcactcggtgacgttctgcccggtcatctcgatgtggatgcc 4520759 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 305 gcattcagccttgggtcgcagtgagtgtggtagcg 339 ||||||| || |||||||||||||||||| ||||| Sbjct: 4520877 gcattcatccgtgggtcgcagtgagtgtgatagcg 4520843
>emb|Y15113.1|MC3DDAH7P Morinda citrifolia mRNA for 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase Length = 2134 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 374 ccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtgg 433 ||||| |||||||| || || || ||||| |||||||| || || | ||||| || ||| Sbjct: 1539 ccaccaatgcactctgtcacattttgtcctgtcatttccagatgaactcctccaggatgg 1480 Query: 434 cttccttcttggtcatgcacatcgaagaat 463 || |||||||| ||||||||||| |||||| Sbjct: 1479 ctcccttcttgctcatgcacatcaaagaat 1450
>emb|Y14798.1|MCY14798 Morinda citrifolia mRNA for 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, DS2 Length = 1944 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 433 gcttccttcttggtcatgcacatcgaagaatgcacgcacctc 474 |||||||||||| ||||||||||| |||||||| | |||||| Sbjct: 1404 gcttccttcttgatcatgcacatcaaagaatgctctcacctc 1363
>gb|AE004711.1| Pseudomonas aeruginosa PAO1, section 272 of 529 of the complete genome Length = 10646 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Minus Query: 368 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcc 423 ||||| || |||||||||||||| |||||||| || ||||| || | ||||||||| Sbjct: 3150 cgcgaaccgccgatgcactcggtgacgttctgcccggtcatctcgatgtggatgcc 3095 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 308 ttcagccttgggtcgcagtgagtgtggtagcggtc 342 ||||||| ||||||||||| |||||||||||||| Sbjct: 3210 ttcagccgcgggtcgcagtgggtgtggtagcggtc 3176
>gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence, gene island PAGI-2(C) Length = 158230 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 368 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcc 423 ||||| || |||||||||||||| |||||||| || ||||| || | ||||||||| Sbjct: 2021 cgcgaaccgccgatgcactcggtgacgttctgcccggtcatctcgatgtggatgcc 2076 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 308 ttcagccttgggtcgcagtgagtgtggtagcggtc 342 ||||||| ||||||||||| |||||||||||||| Sbjct: 1961 ttcagccgcgggtcgcagtgggtgtggtagcggtc 1995
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 317 gggtcgcagtgagtgtggtagcg 339 ||||||||||||||||||||||| Sbjct: 1941336 gggtcgcagtgagtgtggtagcg 1941358 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 517 ggccttgatggtgtttccgtgcatggggtc 546 ||||||||||||||| |||||||| ||||| Sbjct: 1941536 ggccttgatggtgttgccgtgcatcgggtc 1941565 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 377 ccgatgcactcggttacgttctgtccagtcat 408 |||||||| ||||| ||||||||||| ||||| Sbjct: 1941396 ccgatgcattcggtgacgttctgtccggtcat 1941427
>gb|AC124507.4| Mus musculus BAC clone RP23-430B14 from chromosome 7, complete sequence Length = 204278 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 ctcaaaaataaaacaagaaacaaaaca 27 |||||||||||||||| |||||||||| Sbjct: 92754 ctcaaaaataaaacaaaaaacaaaaca 92780
>gb|AC122417.4| Mus musculus BAC clone RP24-159C12 from chromosome 7, complete sequence Length = 188555 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 ctcaaaaataaaacaagaaacaaaaca 27 |||||||||||||||| |||||||||| Sbjct: 182675 ctcaaaaataaaacaaaaaacaaaaca 182701
>gb|AC027239.5|AC027239 Homo sapiens chromosome 11, clone RP11-528L6, complete sequence Length = 196857 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 aaaataaaacaagaaacaaaaca 27 ||||||||||||||||||||||| Sbjct: 82950 aaaataaaacaagaaacaaaaca 82972
>dbj|AP006437.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-674C21, complete sequence Length = 171400 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 aaaataaaacaagaaacaaaaca 27 ||||||||||||||||||||||| Sbjct: 57520 aaaataaaacaagaaacaaaaca 57542
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 374 ccaccgatgcactcggttacgttctgtccagtcat 408 ||||||||||| ||||| |||||||| |||||||| Sbjct: 2088232 ccaccgatgcattcggtgacgttctgcccagtcat 2088266 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 517 ggccttgatggtgtttccgtgcat 540 ||||||||||||||| |||||||| Sbjct: 2088375 ggccttgatggtgttgccgtgcat 2088398
>gb|AF012864.1|AF012864 Petroselinum crispum plastidic 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2 (pDAHPS2) mRNA, nuclear gene encoding plastid protein, complete cds Length = 2094 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 371 gatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctggg 430 |||||||| ||||||||||| ||||| || || ||||| || || || || || || || Sbjct: 1550 gatccaccaatgcactcggtcacgttttggcctgtcatctccagatgaattccgccagga 1491 Query: 431 tggcttccttcttggtcatgcac 453 |||||||||||||| || ||||| Sbjct: 1490 tggcttccttcttgctcgtgcac 1468 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 ttgatggtgtttccgtgcat 540 |||||||||||||||||||| Sbjct: 1400 ttgatggtgtttccgtgcat 1381
>gb|AC123946.4| Mus musculus BAC clone RP23-97L17 from chromosome 12, complete sequence Length = 193610 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 actatctaacccctcctccctg 187 |||||||||||||||||||||| Sbjct: 176404 actatctaacccctcctccctg 176383
>gb|AC164615.3| Mus musculus BAC clone RP23-320N6 from chromosome 12, complete sequence Length = 201524 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 actatctaacccctcctccctg 187 |||||||||||||||||||||| Sbjct: 71598 actatctaacccctcctccctg 71577
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 517 ggccttgatggtgtttccgtgcatggggtc 546 ||||||||||||||| |||||||| ||||| Sbjct: 4952230 ggccttgatggtgttgccgtgcatcgggtc 4952201
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 517 ggccttgatggtgtttccgtgcatggggtc 546 ||||||||||||||| |||||||| ||||| Sbjct: 2434963 ggccttgatggtgttgccgtgcatcgggtc 2434992
>emb|BX640580.3| Zebrafish DNA sequence from clone CH211-278A6 in linkage group 3, complete sequence Length = 184594 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaaa 25 |||||||||||||||||||||| Sbjct: 88665 aaaaataaaacaagaaacaaaa 88644
>emb|AL590633.9| Mouse DNA sequence from clone RP23-211O23 on chromosome X, complete sequence Length = 179289 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1 ctcaaaaataaaacaagaaacaaaac 26 |||||||||||||||| ||||||||| Sbjct: 39496 ctcaaaaataaaacaaaaaacaaaac 39471
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 517 ggccttgatggtgtttccgtgcatggggtc 546 ||||||||||||||| |||||||| ||||| Sbjct: 1638976 ggccttgatggtgttgccgtgcatcgggtc 1639005 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 317 gggtcgcagtgagtgtggtagcggtc 342 ||||||||||| |||||||||||||| Sbjct: 1638776 gggtcgcagtgggtgtggtagcggtc 1638801 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 377 ccgatgcactcggttacgttctgtccagtcat 408 |||||||||||||| |||||||| || ||||| Sbjct: 1638836 ccgatgcactcggtgacgttctgcccggtcat 1638867
>emb|CT030636.13| Mouse DNA sequence from clone RP23-432O2 on chromosome 17, complete sequence Length = 204320 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 aataaaacaagaaacaaaacat 28 |||||||||||||||||||||| Sbjct: 97999 aataaaacaagaaacaaaacat 98020
>gb|AC116804.22| Mus musculus chromosome 17, clone RP24-343C24, complete sequence Length = 186153 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 aataaaacaagaaacaaaacat 28 |||||||||||||||||||||| Sbjct: 123818 aataaaacaagaaacaaaacat 123839
>gb|AC167817.4| Mus musculus BAC clone RP23-146N9 from chromosome 17, complete sequence Length = 213670 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 aataaaacaagaaacaaaacat 28 |||||||||||||||||||||| Sbjct: 191366 aataaaacaagaaacaaaacat 191387
>gb|DQ166519.1| Fagus sylvatica putative 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 mRNA, partial cds Length = 841 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 488 tcgaatggacgagtcttcagaccacatggggccttgatggtgtttccgtgcat 540 ||||| || ||||| |||||||| || || ||||| ||||||||||| ||||| Sbjct: 796 tcgaaggggcgagttttcagaccgcagggagcctttatggtgtttccatgcat 744
>gb|AC185243.2| Pan troglodytes BAC clone CH251-228E19 from chromosome 3, complete sequence Length = 222273 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaa 24 ||||||||||||||||||||| Sbjct: 48786 aaaaataaaacaagaaacaaa 48766
>gb|AC005026.2| Homo sapiens BAC clone GS1-489L14 from 7, complete sequence Length = 123526 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 ctcaaaaataaaacaagaaacaaaa 25 |||||||| |||||||||||||||| Sbjct: 51339 ctcaaaaaaaaaacaagaaacaaaa 51315
>gb|AC133933.4| Mus musculus BAC clone RP24-333C16 from chromosome 18, complete sequence Length = 219699 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 caaaaataaaacaagaaacaaaaca 27 |||||||||||||| |||||||||| Sbjct: 210639 caaaaataaaacaaaaaacaaaaca 210663
>gb|AC146510.3| Pan troglodytes BAC clone RP43-64B24 from 7, complete sequence Length = 153089 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aaaataaaacaagaaacaaaa 25 ||||||||||||||||||||| Sbjct: 10641 aaaataaaacaagaaacaaaa 10661
>gb|AC126467.6| Homo sapiens 3 BAC RP11-58L10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153964 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaa 24 ||||||||||||||||||||| Sbjct: 78940 aaaaataaaacaagaaacaaa 78920
>gb|AC122823.2| Mus musculus BAC clone RP23-205I22 from 18, complete sequence Length = 203725 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 caaaaataaaacaagaaacaaaaca 27 |||||||||||||| |||||||||| Sbjct: 196797 caaaaataaaacaaaaaacaaaaca 196773
>ref|XM_721685.1| Plasmodium yoelii yoelii str. 17XNL chloroquine resistance marker protein (PY00764) partial mRNA Length = 10815 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaa 24 ||||||||||||||||||||| Sbjct: 5328 aaaaataaaacaagaaacaaa 5348
>gb|AC010082.4| Homo sapiens BAC clone RP11-109D3 from 7, complete sequence Length = 143035 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aaaataaaacaagaaacaaaa 25 ||||||||||||||||||||| Sbjct: 69835 aaaataaaacaagaaacaaaa 69815
>gb|AC140112.3| Homo sapiens BAC clone RP11-1278I4 from UL, complete sequence Length = 216658 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaa 24 ||||||||||||||||||||| Sbjct: 177194 aaaaataaaacaagaaacaaa 177214
>gb|AC161535.5| Mus musculus chromosome 5, clone RP23-26J13, complete sequence Length = 209259 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aaaataaaacaagaaacaaaa 25 ||||||||||||||||||||| Sbjct: 72093 aaaataaaacaagaaacaaaa 72113
>emb|AL121904.13|HSDJ410C9 Human DNA sequence from clone RP3-410C9 on chromosome 20 Contains two novel genes and two CpG islands, complete sequence Length = 109849 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaa 24 ||||||||||||||||||||| Sbjct: 74791 aaaaataaaacaagaaacaaa 74771
>emb|AL078461.38|HSDJ901O8 Human DNA sequence from clone RP5-901O8 on chromosome 20q11.1-11.23 Contains part of the C20orf104 gene, the COX7BP2 gene for cytochrome c oxidase VIIb subunit pseudogene 2 and a hypoxia inducible protein 1 (HIG1) pseudogene, complete sequence Length = 99876 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ctcaaaaataaaacaagaaacaaaa 25 |||||||| |||||||||||||||| Sbjct: 47076 ctcaaaaacaaaacaagaaacaaaa 47100
>emb|BX883042.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 1/11 Length = 348780 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cctcttcctgagtctctcggc 273 ||||||||||||||||||||| Sbjct: 96541 cctcttcctgagtctctcggc 96561
>emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BAC clone F3L17 (ESSA project) Length = 94319 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 taaaacaagaaacaaaacata 29 ||||||||||||||||||||| Sbjct: 17808 taaaacaagaaacaaaacata 17828
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 taaaacaagaaacaaaacata 29 ||||||||||||||||||||| Sbjct: 5873 taaaacaagaaacaaaacata 5893
>emb|AL021633.2|ATF8F16 Arabidopsis thaliana DNA chromosome 4, BAC clone F8F16 (ESSA project) Length = 93038 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 taaaacaagaaacaaaacata 29 ||||||||||||||||||||| Sbjct: 79691 taaaacaagaaacaaaacata 79711
>emb|AJ439060.1|AGA439060 Anopheles gambiae DNA from 2R chromosome, clone 11N17 Length = 147295 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 aaacaagaaacaaaacatagtgcaa 35 |||||||||| |||||||||||||| Sbjct: 7068 aaacaagaaaaaaaacatagtgcaa 7092
>emb|AJ438610.1|AGA438610 Anopheles gambiae DNA from chromosome 2R, BAC clone 4F11 Length = 129642 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 aaacaagaaacaaaacatagtgcaa 35 |||||||||| |||||||||||||| Sbjct: 108986 aaacaagaaaaaaaacatagtgcaa 109010
>gb|AC027309.3| Homo sapiens chromosome 5 clone CTB-79E8, complete sequence Length = 189479 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ctcaaaaataaaacaagaaacaaaa 25 |||||||| |||||||||||||||| Sbjct: 22949 ctcaaaaaaaaaacaagaaacaaaa 22973
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 518 gccttgatggtgtttccgtgcatggggtc 546 |||||||||||||| ||||||||||||| Sbjct: 1294157 gccttgatggtgttggcgtgcatggggtc 1294185
>gb|AC023904.10| Homo sapiens chromosome 10 clone RP11-369L1, complete sequence Length = 190712 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 ctcaaaaataaaacaagaaacaaaa 25 ||||||||||||| ||||||||||| Sbjct: 5203 ctcaaaaataaaagaagaaacaaaa 5179
>gb|AC011407.6| Homo sapiens chromosome 5 clone CTB-54I1, complete sequence Length = 240957 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ctcaaaaataaaacaagaaacaaaa 25 |||||||| |||||||||||||||| Sbjct: 222632 ctcaaaaaaaaaacaagaaacaaaa 222656
>gb|AC097536.3| Homo sapiens BAC clone RP11-803N5 from 2, complete sequence Length = 194553 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aaaataaaacaagaaacaaaa 25 ||||||||||||||||||||| Sbjct: 15963 aaaataaaacaagaaacaaaa 15943
>gb|AC131005.3| Homo sapiens 3 BAC RP11-88K11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191231 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ctcaaaaataaaacaagaaacaaaa 25 |||||||||||||||| |||||||| Sbjct: 24659 ctcaaaaataaaacaaaaaacaaaa 24683
>gb|AC007736.3| Homo sapiens BAC clone RP11-15J24 from 2, complete sequence Length = 172476 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 245 ttcatcctcctcttcctgagtctct 269 |||||||||||| |||||||||||| Sbjct: 37901 ttcatcctcctcctcctgagtctct 37877
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 tcaaaaataaaacaagaaaca 22 ||||||||||||||||||||| Sbjct: 56897 tcaaaaataaaacaagaaaca 56917
>gb|AC102839.24| Mus musculus chromosome 5, clone RP24-343D8, complete sequence Length = 196090 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 ctcaaaaataaaacaagaaacaaaa 25 |||||||||||||||| |||||||| Sbjct: 194282 ctcaaaaataaaacaacaaacaaaa 194258
>emb|BX465210.7| Zebrafish DNA sequence from clone CH211-266A5 in linkage group 4, complete sequence Length = 171708 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ctcaaaaataaaacaagaaacaaaa 25 |||||||||||||||| |||||||| Sbjct: 26202 ctcaaaaataaaacaacaaacaaaa 26226
>gb|AC105335.27| Mus musculus chromosome 5, clone RP23-377H14, complete sequence Length = 171789 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ctcaaaaataaaacaagaaacaaaa 25 |||||||||||||||| |||||||| Sbjct: 103931 ctcaaaaataaaacaacaaacaaaa 103955
>emb|BX927106.11| Zebrafish DNA sequence from clone CH211-121G18 in linkage group 2, complete sequence Length = 147604 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 aaaataaaacaagaaacaaaacata 29 |||||||||||| |||||||||||| Sbjct: 15124 aaaataaaacaaaaaacaaaacata 15100
>gb|AC114618.9| Mus musculus chromosome 3, clone RP24-86C15, complete sequence Length = 209209 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 caaaaataaaacaagaaacaaaaca 27 |||||||||||||| |||||||||| Sbjct: 103322 caaaaataaaacaaaaaacaaaaca 103346
>emb|AL671671.5| Mouse DNA sequence from clone RP23-419D6 on chromosome 4, complete sequence Length = 102298 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 caaaaataaaacaagaaacaaaaca 27 ||||||| ||||||||||||||||| Sbjct: 97622 caaaaatgaaacaagaaacaaaaca 97646
>ref|NM_124165.2| Arabidopsis thaliana RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D) AT5G47910 (RBOHD) mRNA, complete cds Length = 3201 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaa 23 |||||||||||||||||||| Sbjct: 2929 aaaaataaaacaagaaacaa 2948
>gb|AC153973.33| Mus musculus 10 BAC RP24-158P6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 164139 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ataaaacaagaaacaaaaca 27 |||||||||||||||||||| Sbjct: 331 ataaaacaagaaacaaaaca 350
>gb|AC132350.4| Mus musculus BAC clone RP24-95A6 from chromosome 6, complete sequence Length = 177167 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaaacatagt 31 ||||| ||||||||||| |||||||||| Sbjct: 9083 aaaaaaaaaacaagaaaaaaaacatagt 9110
>gb|AC163094.5| Mus musculus chromosome 5, clone RP23-123P10, complete sequence Length = 208850 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 3 caaaaataaaacaagaaacaaaacatag 30 |||||| |||| |||||||||||||||| Sbjct: 170801 caaaaaaaaaaaaagaaacaaaacatag 170828
>ref|NM_004685.2| Homo sapiens myotubularin related protein 6 (MTMR6), mRNA Length = 4201 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 aaaacaagaaacaaaacata 29 |||||||||||||||||||| Sbjct: 3436 aaaacaagaaacaaaacata 3455
>gb|AC115846.7| Mus musculus chromosome 1, clone RP24-245O4, complete sequence Length = 170731 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 104130 aaaaataaaacaaaaaacaaaaca 104107
>gb|AC150644.4| Bos taurus BAC CH240-223I2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 199501 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaa 23 |||||||||||||||||||| Sbjct: 180909 aaaaataaaacaagaaacaa 180890
>gb|AC129574.8| Mus musculus chromosome 16, clone RP23-78C2, complete sequence Length = 214649 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 132625 aaaaataaaacaaaaaacaaaaca 132602
>gb|AC102388.7| Mus musculus chromosome 3, clone RP24-298F19, complete sequence Length = 166620 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 caaaaataaaacaagaaacaaaac 26 |||||| ||||||||||||||||| Sbjct: 10781 caaaaacaaaacaagaaacaaaac 10804
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 ccgatgcactcggttacgttctgtccagtcat 408 |||||||||||||| |||||||| || ||||| Sbjct: 1347017 ccgatgcactcggtgacgttctgcccggtcat 1346986
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 517 ggccttgatggtgtttccgtgcat 540 ||||||||||||||| |||||||| Sbjct: 4182675 ggccttgatggtgttgccgtgcat 4182652
>emb|CR932642.1|CNS0KYD3 Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctcaaaaataaaacaagaaa 20 |||||||||||||||||||| Sbjct: 1281 ctcaaaaataaaacaagaaa 1262
>emb|BX548045.6| Zebrafish DNA sequence from clone DKEY-224A6 in linkage group 17, complete sequence Length = 185946 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||| |||||||||||||||||| Sbjct: 108874 aaaaaaaaaacaagaaacaaaaca 108851
>gb|AC127236.3| Mus musculus BAC clone RP24-351L1 from chromosome 18, complete sequence Length = 188946 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 tcaaaaataaaacaagaaacaaaa 25 |||||||||||| ||||||||||| Sbjct: 60445 tcaaaaataaaaaaagaaacaaaa 60422
>gb|BC035436.1| Homo sapiens myotubularin related protein 6, mRNA (cDNA clone IMAGE:4515342) Length = 2163 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 aaaacaagaaacaaaacata 29 |||||||||||||||||||| Sbjct: 1399 aaaacaagaaacaaaacata 1418
>gb|AC126030.3| Mus musculus BAC clone RP23-452N11 from chromosome 16, complete sequence Length = 187505 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 tcaaaaataaaacaagaaacaaaa 25 ||||||||||||||||| |||||| Sbjct: 173752 tcaaaaataaaacaagagacaaaa 173729
>emb|CR956391.5| Pig DNA sequence from clone PigE-133M12 on chromosome 7, complete sequence Length = 168012 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaa 23 |||||||||||||||||||| Sbjct: 101293 aaaaataaaacaagaaacaa 101312
>gb|AC131652.2| Mus musculus BAC clone RP23-216A20 from 16, complete sequence Length = 184989 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aaaataaaacaagaaacaaa 24 |||||||||||||||||||| Sbjct: 59457 aaaataaaacaagaaacaaa 59476
>gb|AC122215.4| Mus musculus BAC clone RP23-106M18 from 16, complete sequence Length = 195086 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctcaaaaataaaacaagaaa 20 |||||||||||||||||||| Sbjct: 16 ctcaaaaataaaacaagaaa 35
>gb|AC122389.2| Mus musculus BAC clone RP24-80N23 from 16, complete sequence Length = 217046 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 tcaaaaataaaacaagaaacaaaa 25 ||||||||||||||||| |||||| Sbjct: 31069 tcaaaaataaaacaagagacaaaa 31046
>gb|AC112269.3| Mus musculus BAC clone RP24-115O19 from 2, complete sequence Length = 172714 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 1 ctcaaaaat-aaaacaagaaacaaaaca 27 ||||||||| |||||||||||||||||| Sbjct: 58212 ctcaaaaatcaaaacaagaaacaaaaca 58239
>gb|AC117837.4| Mus musculus BAC clone RP24-196P11 from 10, complete sequence Length = 145990 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ataaaacaagaaacaaaaca 27 |||||||||||||||||||| Sbjct: 127873 ataaaacaagaaacaaaaca 127892
>gb|AC118198.7| Mus musculus chromosome 10, clone RP23-179O14, complete sequence Length = 225267 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||| |||||||||||||||||| Sbjct: 193637 aaaaaaaaaacaagaaacaaaaca 193614
>gb|AC073090.8| Homo sapiens BAC clone RP11-328J2 from 7, complete sequence Length = 116557 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 aaaataaaacaagaaacaaaacat 28 |||| ||||||||||||||||||| Sbjct: 77415 aaaacaaaacaagaaacaaaacat 77392
>gb|AC093856.3| Homo sapiens BAC clone RP11-518I12 from 7, complete sequence Length = 205317 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 caaaaataaaacaagaaacaaaac 26 ||||| |||||||||||||||||| Sbjct: 30738 caaaagtaaaacaagaaacaaaac 30715
>gb|AC104057.4| Homo sapiens BAC clone RP13-157F18 from 7, complete sequence Length = 196523 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaa 23 |||||||||||||||||||| Sbjct: 61690 aaaaataaaacaagaaacaa 61671
>gb|AC110919.10| Mus musculus chromosome 15, clone RP23-216B8, complete sequence Length = 228930 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ctcaaaaataaaacaagaaacaaa 24 ||||||||||||| |||||||||| Sbjct: 204388 ctcaaaaataaaaaaagaaacaaa 204365
>gb|AC116129.13| Mus musculus chromosome 1, clone RP23-98F11, complete sequence Length = 216320 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaaaca 27 |||||||||| ||||||||||||| Sbjct: 106971 aaaaataaaaaaagaaacaaaaca 106948
>gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete sequence Length = 128352 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaa 23 |||||||||||||||||||| Sbjct: 93715 aaaaataaaacaagaaacaa 93696
>emb|AL590787.24| Human DNA sequence from clone RP11-271M24 on chromosome 13 Contains the MTMR6 gene for myotubularin related protein 6, the 5' end of a novel gene (KIAA0410) and 2 CpG islands, complete sequence Length = 122589 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 aaaacaagaaacaaaacata 29 |||||||||||||||||||| Sbjct: 33256 aaaacaagaaacaaaacata 33237
>emb|AL513212.11| Human DNA sequence from clone RP11-356B7 on chromosome 6, complete sequence Length = 25288 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 953 aaaaataaaacaaaaaacaaaaca 930
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 ccgatgcactcggttacgttctgtccagtcat 408 |||||||||||||| |||||||| || ||||| Sbjct: 1685118 ccgatgcactcggtgacgttctgcccggtcat 1685087
>emb|AL499609.9| Human DNA sequence from clone RP11-309N23 on chromosome 1, complete sequence Length = 136515 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 caaaaataaaacaagaaaca 22 |||||||||||||||||||| Sbjct: 100986 caaaaataaaacaagaaaca 100967
>emb|AL353802.14| Human DNA sequence from clone RP4-662P1 on chromosome 1p31.3-32.3 Contains part of the gene for InaD-like protein (INADL), complete sequence Length = 143226 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||| |||||||||||||||||| Sbjct: 45446 aaaaaaaaaacaagaaacaaaaca 45469
>emb|AL161938.6| Human DNA sequence from clone RP11-268G13 on chromosome 20 Contains STSs, GSSs and two CpG islands, complete sequence Length = 138062 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 aaaataaaacaagaaacaaaacat 28 |||||||||||| ||||||||||| Sbjct: 75117 aaaataaaacaaaaaacaaaacat 75094
>emb|AL031118.22|HS153G14 Human DNA sequence from clone RP1-153G14 on chromosome 6p21.3-22.2 Contains the 3' end of the ZNF184 gene for Kruppel-like zinc finger protein 184, a gene for a possible CA binding protein similar to NEFA, part of a gene for a novel C2H2 type Zinc Finger protein, ESTs, STSs, GSSs, 2 CpG islands, atag and ca repeat polymorphisms, complete sequence Length = 82456 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ctcaaaaataaaacaagaaacaaa 24 |||||||||||||||| ||||||| Sbjct: 33887 ctcaaaaataaaacaacaaacaaa 33864
>emb|AL023807.6|HS525L6 Human DNA sequence from clone RP3-525L6 on chromosome 6p22.3-23 Contains the 5' end of a gene for a kinesin-like protein (RBKIN) protein, a ribosomal protein S12 (RPS12) pseudogene and a CpG Island, complete sequence Length = 168111 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 1048 aaaaataaaacaaaaaacaaaaca 1071
>emb|AL035088.1|HS3D11 Human DNA sequence from clone RP1-3D11 on chromosome Xq22.1-23 Contains a pseudogene similar to part of keratin 18 (K18, CYK18) (KRT18), a novel gene, the 5' end of a novel gene and two CpG islands, complete sequence Length = 146358 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 105993 aaaaataaaacaaaaaacaaaaca 106016
>gb|AC091204.3| Drosophila melanogaster 3L NOVECTOR RP98-27G13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185825 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ataaaacaagaaacaaaaca 27 |||||||||||||||||||| Sbjct: 169705 ataaaacaagaaacaaaaca 169686
>emb|AL832017.2|HSM803324 Homo sapiens mRNA; cDNA DKFZp451G104 (from clone DKFZp451G104); complete cds Length = 4131 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 aaaacaagaaacaaaacata 29 |||||||||||||||||||| Sbjct: 3359 aaaacaagaaacaaaacata 3378
>gb|BC040012.1| Homo sapiens myotubularin related protein 6, mRNA (cDNA clone MGC:48897 IMAGE:5495564), complete cds Length = 4069 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 aaaacaagaaacaaaacata 29 |||||||||||||||||||| Sbjct: 3308 aaaacaagaaacaaaacata 3327
>emb|AL161573.2|ATCHRIV69 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 69 Length = 197655 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 caaaaataaaacaagaaaca 22 |||||||||||||||||||| Sbjct: 98516 caaaaataaaacaagaaaca 98497
>emb|AL035353.1|ATF16A16 Arabidopsis thaliana DNA chromosome 4, BAC clone F16A16 (ESSAII project) Length = 97155 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 caaaaataaaacaagaaaca 22 |||||||||||||||||||| Sbjct: 78551 caaaaataaaacaagaaaca 78570
>emb|BX510655.18| Zebrafish DNA sequence from clone DKEY-94J16 in linkage group 5, complete sequence Length = 205761 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 taaaacaagaaacaaaacat 28 |||||||||||||||||||| Sbjct: 6522 taaaacaagaaacaaaacat 6503
>gb|AC018861.9| Homo sapiens chromosome 8, clone RP11-577N1, complete sequence Length = 187047 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ttcatcctcctcttcctgag 264 |||||||||||||||||||| Sbjct: 122204 ttcatcctcctcttcctgag 122185
>gb|BC035154.2| Homo sapiens cDNA clone IMAGE:5265178 Length = 2038 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ctcaaaaataaaacaagaaacaaa 24 |||||||||||||||| ||||||| Sbjct: 742 ctcaaaaataaaacaacaaacaaa 719
>emb|CR860784.1| Pongo pygmaeus mRNA; cDNA DKFZp459A136 (from clone DKFZp459A136) Length = 4013 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 aaaacaagaaacaaaacata 29 |||||||||||||||||||| Sbjct: 3246 aaaacaagaaacaaaacata 3265
>gb|AC091221.3| Drosophila melanogaster 3L BAC RP98-9I19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185790 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ataaaacaagaaacaaaaca 27 |||||||||||||||||||| Sbjct: 177904 ataaaacaagaaacaaaaca 177923
>gb|BC031834.1| Homo sapiens, clone IMAGE:4514938, mRNA, partial cds Length = 2163 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 aaaacaagaaacaaaacata 29 |||||||||||||||||||| Sbjct: 1399 aaaacaagaaacaaaacata 1418
>gb|AE005900.1| Caulobacter crescentus CB15 section 226 of 359 of the complete genome Length = 14916 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 320 tcgcagtgagtgtggtagcggtcacccaggtc 351 |||||||| |||||||||||||| ||||||| Sbjct: 7752 tcgcagtgggtgtggtagcggtcggccaggtc 7783
>dbj|AK094082.1| Homo sapiens cDNA FLJ36763 fis, clone UTERU2019005 Length = 2007 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 aaaacaagaaacaaaacata 29 |||||||||||||||||||| Sbjct: 1804 aaaacaagaaacaaaacata 1823
>gb|AC099805.2| Homo sapiens chromosome 8, clone RP11-1102P16, complete sequence Length = 178448 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 56355 aaaaataaaacaaaaaacaaaaca 56378
>gb|AC109357.3| Homo sapiens BAC clone RP11-636M7 from 4, complete sequence Length = 110883 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 3496 aaaaataaaacaaaaaacaaaaca 3519
>gb|AF290914.2| Mus musculus stabilin-1 mRNA, complete cds Length = 7931 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gatggtgtttccgtgcatgg 542 |||||||||||||||||||| Sbjct: 5555 gatggtgtttccgtgcatgg 5536
>gb|AF173226.1| Stenotrophomonas maltophilia multidrug efflux system SmeR (smeR), SmeS (smeS), SmeA (smeA), SmeB (smeB), and SmeC (smeC) genes, complete cds Length = 8560 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 gcggtcacccaggtcatcga 356 |||||||||||||||||||| Sbjct: 3945 gcggtcacccaggtcatcga 3964
>gb|AC093505.2| Homo sapiens chromosome 5 clone CTD-2010M15, complete sequence Length = 131489 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aaaataaaacaagaaacaaa 24 |||||||||||||||||||| Sbjct: 57541 aaaataaaacaagaaacaaa 57560
>ref|XM_693655.1| PREDICTED: Danio rerio similar to HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 (LOC570206), mRNA Length = 3418 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cttcatcctcctcttcctga 263 |||||||||||||||||||| Sbjct: 868 cttcatcctcctcttcctga 849
>gb|AF424625.1|AF424625 Arabidopsis thaliana AT5g47910/MCA23_25 mRNA, complete cds Length = 2999 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaa 23 |||||||||||||||||||| Sbjct: 2929 aaaaataaaacaagaaacaa 2948
>gb|AC016604.6| Homo sapiens chromosome 5 clone CTD-2150I21, complete sequence Length = 94147 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aaataaaacaagaaacaaaa 25 |||||||||||||||||||| Sbjct: 89060 aaataaaacaagaaacaaaa 89041
>gb|AC158626.6| Mus musculus 6 BAC RP23-4F16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 240079 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaaaca 27 |||||||||||||||||| ||||| Sbjct: 59550 aaaaataaaacaagaaactaaaca 59573
>gb|AC139138.2| Homo sapiens chromosome 17, clone XXfos-82524G9, complete sequence Length = 41839 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 37654 aaaaataaaacaaaaaacaaaaca 37677
>gb|AC159898.2| Mus musculus BAC clone RP23-254N11 from chromosome 16, complete sequence Length = 191677 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctcaaaaataaaacaagaaa 20 |||||||||||||||||||| Sbjct: 75713 ctcaaaaataaaacaagaaa 75732 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 aaataaaacaagaaacaaaacata 29 |||||||||||||||||| ||||| Sbjct: 17487 aaataaaacaagaaacaacacata 17510
>gb|AC162378.2| Mus musculus BAC clone RP24-82K1 from chromosome 16, complete sequence Length = 210112 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 aaataaaacaagaaacaaaacata 29 |||||||||||||||||| ||||| Sbjct: 31067 aaataaaacaagaaacaacacata 31044
>gb|AC154446.2| Mus musculus BAC clone RP24-181E7 from chromosome 14, complete sequence Length = 163771 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 gatggtgtttccgtgcatgg 542 |||||||||||||||||||| Sbjct: 108177 gatggtgtttccgtgcatgg 108196
>gb|BC031166.1| Mus musculus stabilin 1, mRNA (cDNA clone IMAGE:4983573), partial cds Length = 3911 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gatggtgtttccgtgcatgg 542 |||||||||||||||||||| Sbjct: 1478 gatggtgtttccgtgcatgg 1459
>dbj|AK028441.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4631403B18 product:inferred: hypothetical {Homo sapiens}, full insert sequence Length = 3454 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gatggtgtttccgtgcatgg 542 |||||||||||||||||||| Sbjct: 342 gatggtgtttccgtgcatgg 323
>gb|BC049247.1| Mus musculus stabilin 1, mRNA (cDNA clone IMAGE:5038209), containing frame-shift errors Length = 3025 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gatggtgtttccgtgcatgg 542 |||||||||||||||||||| Sbjct: 527 gatggtgtttccgtgcatgg 508
>gb|AC156995.6| Mus musculus chromosome 5, clone RP23-77E18, complete sequence Length = 138507 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 3 caaaaataaaacaagaaacaaaacatag 30 |||||| |||| |||||||||||||||| Sbjct: 103221 caaaaaaaaaaaaagaaacaaaacatag 103194
>gb|AC098586.3| Homo sapiens BAC clone RP11-109F18 from 4, complete sequence Length = 150172 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 92467 aaaaataaaacaaaaaacaaaaca 92490
>gb|AC093892.3| Homo sapiens BAC clone RP11-702L18 from 2, complete sequence Length = 111078 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gggggcagtggcaggttgtt 231 |||||||||||||||||||| Sbjct: 17468 gggggcagtggcaggttgtt 17487
>gb|AC159372.1| Mus musculus BAC clone RP24-285I4 from chromosome 9, complete sequence Length = 171391 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 ctcaaaaataaaacaagaaacaaa 24 ||||||||| |||||||||||||| Sbjct: 52943 ctcaaaaattaaacaagaaacaaa 52966
>gb|AC022383.3|AC022383 Homo sapiens chromosome 3 clone RP11-415K13 map 3p, complete sequence Length = 188631 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 cagaccacatggggccttga 524 |||||||||||||||||||| Sbjct: 165965 cagaccacatggggccttga 165946
>gb|AC008604.5|AC008604 Homo sapiens chromosome 5 clone CTB-109F8, complete sequence Length = 108976 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 aaaataaaacaagaaacaaa 24 |||||||||||||||||||| Sbjct: 92425 aaaataaaacaagaaacaaa 92406
>gb|AC012497.8| Homo sapiens BAC clone RP11-349I7 from 2, complete sequence Length = 212104 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aaataaaacaagaaacaaaa 25 |||||||||||||||||||| Sbjct: 208788 aaataaaacaagaaacaaaa 208769
>gb|AC093320.24| Mus musculus strain C57BL/6J chromosome 1 clone rp23-45n11, complete sequence Length = 245536 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaaaca 27 |||||||||| ||||||||||||| Sbjct: 24022 aaaaataaaaaaagaaacaaaaca 24045
>gb|AC006346.1|AC006346 Homo sapiens PAC clone RP5-820G22 from 7, complete sequence Length = 130336 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaa 23 |||||||||||||||||||| Sbjct: 59175 aaaaataaaacaagaaacaa 59194
>ref|XM_214279.3| PREDICTED: Rattus norvegicus stabilin 1 (predicted) (Stab1_predicted), mRNA Length = 8055 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gatggtgtttccgtgcatgg 542 |||||||||||||||||||| Sbjct: 5814 gatggtgtttccgtgcatgg 5795
>gb|AC116554.26| Mus musculus strain C57BL/6J chromosome 1 clone rp23-139k14, complete sequence Length = 240923 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaaaca 27 |||||||||| ||||||||||||| Sbjct: 33776 aaaaataaaaaaagaaacaaaaca 33753
>gb|AC113306.6| Mus musculus chromosome 7, clone RP23-434A16, complete sequence Length = 200177 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||| |||||||||||||||||| Sbjct: 32218 aaaaaaaaaacaagaaacaaaaca 32241
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23 Length = 82503 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaa 23 |||||||||||||||||||| Sbjct: 79022 aaaaataaaacaagaaacaa 79041
>dbj|AK025507.1| Homo sapiens cDNA: FLJ21854 fis, clone HEP02270, highly similar to AF072928 Homo sapiens myotubularin related protein 6 mRNA Length = 2589 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 aaaacaagaaacaaaacata 29 |||||||||||||||||||| Sbjct: 1824 aaaacaagaaacaaaacata 1843
>emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102 Length = 340000 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tgcaaatgccaactatctaa 174 |||||||||||||||||||| Sbjct: 99373 tgcaaatgccaactatctaa 99354
>emb|CR933843.16| Zebrafish DNA sequence from clone DKEY-105E17 in linkage group 18, complete sequence Length = 86233 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||| |||||||||||||||||| Sbjct: 65414 aaaaacaaaacaagaaacaaaaca 65391
>gb|AC153829.7| Mus musculus 10 BAC RP23-116E8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188043 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||| |||||||||||||||||| Sbjct: 134919 aaaaaaaaaacaagaaacaaaaca 134896
>gb|AC159206.2| Mus musculus BAC clone RP23-214M19 from chromosome 7, complete sequence Length = 224088 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ctgacttcatcctcctcttc 259 |||||||||||||||||||| Sbjct: 79836 ctgacttcatcctcctcttc 79855
>emb|X79860.1|RNH1SHR R.norvegicus H1SHR mRNA Length = 1789 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 cttcatcctcctcttcctga 263 |||||||||||||||||||| Sbjct: 1035 cttcatcctcctcttcctga 1054
>emb|AL117355.5|CNS01DRL Human chromosome 14 DNA sequence BAC R-354E14 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 174933 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ctcaaaaataaaacaagaaacaaa 24 |||||||||||||||| ||||||| Sbjct: 21633 ctcaaaaataaaacaaaaaacaaa 21610
>gb|AE003557.4| Drosophila melanogaster chromosome 3L, section 28 of 83 of the complete sequence Length = 287988 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ataaaacaagaaacaaaaca 27 |||||||||||||||||||| Sbjct: 277506 ataaaacaagaaacaaaaca 277487
>emb|AL139317.5|CNS01DXI Human chromosome 14 DNA sequence BAC R-589M4 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 190648 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 1 ctcaaaaataaaacaagaaacaaaacat 28 |||||||| |||| |||||||||||||| Sbjct: 71192 ctcaaaaaaaaaaaaagaaacaaaacat 71165
>dbj|AP001753.1| Homo sapiens genomic DNA, chromosome 21q, section 97/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 260407 aaaaataaaacaaaaaacaaaaca 260384
>gb|AC102033.9| Mus musculus chromosome 15, clone RP23-86G8, complete sequence Length = 202269 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ctcaaaaataaaacaagaaacaaa 24 ||||||||||||| |||||||||| Sbjct: 11185 ctcaaaaataaaaaaagaaacaaa 11162
>gb|AC157763.2| Pan troglodytes BAC clone CH251-340C15 from chromosome unknown, complete sequence Length = 198239 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 153711 aaaaataaaacaaaaaacaaaaca 153688
>gb|AF072928.1|AF072928 Homo sapiens myotubularin related protein 6 mRNA, partial cds Length = 3382 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 aaaacaagaaacaaaacata 29 |||||||||||||||||||| Sbjct: 2650 aaaacaagaaacaaaacata 2669
>gb|AF055357.1|AF055357 Arabidopsis thaliana respiratory burst oxidase protein D (RbohD) mRNA, complete cds Length = 3035 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaa 23 |||||||||||||||||||| Sbjct: 2918 aaaaataaaacaagaaacaa 2937
>gb|AF057019.1|AF057019 Dictyostelium discoideum interaptin (abpD) gene, complete cds Length = 8574 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 1364 aaaaataaaacaaaaaacaaaaca 1341
>emb|BX322562.1|HSQ21A11 Homo sapiens chromosome 21 from cosmid LL21NC02-21A1 map 21q22.3 region D21S171-LA161, complete sequence Length = 45600 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tgcaaatgccaactatctaa 174 |||||||||||||||||||| Sbjct: 17837 tgcaaatgccaactatctaa 17818
>gb|AC005181.1|AC005181 Homo sapiens chromosome 17, clone hRPK.1003_J_3, complete sequence Length = 202763 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||| |||||||||||||||||| Sbjct: 105988 aaaaaaaaaacaagaaacaaaaca 106011
>gb|AC132105.3| Mus musculus BAC clone RP24-224B9 from 16, complete sequence Length = 160757 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 aaataaaacaagaaacaaaacata 29 |||||||||||||||||| ||||| Sbjct: 104188 aaataaaacaagaaacaacacata 104211
>ref|NM_138672.1| Mus musculus stabilin 1 (Stab1), mRNA Length = 7931 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gatggtgtttccgtgcatgg 542 |||||||||||||||||||| Sbjct: 5555 gatggtgtttccgtgcatgg 5536
>gb|AF020536.1|HSU3BTWO2 Homo sapiens U3 small nuclear RNA (U3b2) gene, 5' flanking region Length = 328 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 236 aaaaataaaacaaaaaacaaaaca 259
>gb|AC132443.3| Mus musculus BAC clone RP23-157C23 from 6, complete sequence Length = 179231 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaaacatagt 31 ||||| ||||||||||| |||||||||| Sbjct: 174435 aaaaaaaaaacaagaaaaaaaacatagt 174462
>gb|AC145168.5| Mus musculus BAC clone RP23-398K14 from 3, complete sequence Length = 217058 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 caaaaataaaacaagaaacaaaac 26 |||||| ||||||||||||||||| Sbjct: 46228 caaaaacaaaacaagaaacaaaac 46205
>emb|AL732584.6| Mouse DNA sequence from clone RP23-205K4 on chromosome 4, complete sequence Length = 172710 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 169322 aaaaataaaacaaaaaacaaaaca 169345
>emb|CT485678.1| Xenopus tropicalis finished cDNA, clone TEgg038i22 Length = 3556 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 agcagcccaccatacaaact 127 |||||||||||||||||||| Sbjct: 1437 agcagcccaccatacaaact 1418
>gb|AC000373.1|HSAC000373 Human cosmid g1862d218, complete sequence Length = 39602 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aaaaataaaacaagaaacaa 23 |||||||||||||||||||| Sbjct: 6528 aaaaataaaacaagaaacaa 6547
>gb|U47635.1|HSU47635 Human D13S824E locus mRNA, complete cds Length = 2486 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 aaaacaagaaacaaaacata 29 |||||||||||||||||||| Sbjct: 1783 aaaacaagaaacaaaacata 1802
>dbj|AP006097.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45O19, TM0174, complete sequence Length = 75668 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 3 caaaaataaaacaagaaacaaaacatag 30 |||| |||||||||||||||| |||||| Sbjct: 37060 caaagataaaacaagaaacaatacatag 37033
>gb|AC161878.3| Mus musculus BAC clone RP23-303B4 from chromosome 1, complete sequence Length = 169556 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 caaaaataaaacaagaaacaaaac 26 |||||||||||||| ||||||||| Sbjct: 48032 caaaaataaaacaaaaaacaaaac 48009
>emb|AL669982.10| Mouse DNA sequence from clone RP23-297N24 on chromosome 4, complete sequence Length = 240125 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 caaaaataaaacaagaaacaaaac 26 |||||||||||||| ||||||||| Sbjct: 99315 caaaaataaaacaacaaacaaaac 99338
>emb|AL928639.5| Mouse DNA sequence from clone RP23-446O17 on chromosome 2, complete sequence Length = 177843 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 1 ctcaaaaat-aaaacaagaaacaaaaca 27 ||||||||| |||||||||||||||||| Sbjct: 7197 ctcaaaaatcaaaacaagaaacaaaaca 7170
>gb|AC022384.5| Homo sapiens chromosome 3 clone RP11-438J1 map 3p, complete sequence Length = 210053 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 cagaccacatggggccttga 524 |||||||||||||||||||| Sbjct: 119000 cagaccacatggggccttga 118981
>gb|AC162924.5| Mus musculus BAC clone RP23-292J21 from chromosome 6, complete sequence Length = 179209 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 47968 aaaaataaaacaaaaaacaaaaca 47945
>dbj|AB060203.1| Macaca fascicularis brain cDNA clone:QflA-10629, full insert sequence Length = 2948 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 gtggatgcctcctgggtggc 434 |||||||||||||||||||| Sbjct: 989 gtggatgcctcctgggtggc 970
>dbj|AP001058.1| Homo sapiens genomic DNA, chromosome 21, clone:D9G11, MX1-D21S171 region, complete sequence Length = 39553 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aaaaataaaacaagaaacaaaaca 27 ||||||||||||| |||||||||| Sbjct: 1470 aaaaataaaacaaaaaacaaaaca 1447 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,680,264 Number of Sequences: 3902068 Number of extensions: 5680264 Number of successful extensions: 127145 Number of sequences better than 10.0: 232 Number of HSP's better than 10.0 without gapping: 231 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 126209 Number of HSP's gapped (non-prelim): 904 length of query: 571 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 548 effective length of database: 17,143,297,704 effective search space: 9394527141792 effective search space used: 9394527141792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
