ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32f14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473541.1| Oryza sativa (japonica cultivar-group), predic... 345 1e-91
2gb|AY224421.1| Oryza sativa (japonica cultivar-group) isolate 20... 345 1e-91
3dbj|AK070267.1| Oryza sativa (japonica cultivar-group) cDNA clon... 345 1e-91
4gb|AY106270.1| Zea mays PCO071747 mRNA sequence 202 1e-48
5emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4,... 165 2e-37
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
8dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
9ref|XM_477996.1| Oryza sativa (japonica cultivar-group), mRNA 82 2e-12
10dbj|AK067630.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
11dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
12dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
13gb|AY109309.1| Zea mays PCO140942 mRNA sequence 64 6e-07
14gb|BT017546.1| Zea mays clone EL01N0422H07.c mRNA sequence 58 4e-05
15ref|NM_001035955.1| Arabidopsis thaliana protein binding / ubiqu... 56 1e-04
16ref|NM_101146.2| Arabidopsis thaliana protein binding / ubiquiti... 56 1e-04
17gb|BT000279.1| Arabidopsis thaliana unknown protein (At3g13380At... 56 1e-04
18gb|AY136370.1| Arabidopsis thaliana unknown protein (At3g13380:A... 56 1e-04
19gb|DQ059089.1| Arabidopsis thaliana RING domain protein (At1g127... 56 1e-04
20emb|BX814816.1|CNS0AAJM Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
21gb|AC025417.4|AC025417 Genomic sequence for Arabidopsis thaliana... 56 1e-04
22ref|NM_104995.2| Arabidopsis thaliana protein binding / ubiquiti... 46 0.13
23ref|XM_473669.1| Oryza sativa (japonica cultivar-group), predic... 46 0.13
24emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4,... 46 0.13
25gb|AY058092.1| Arabidopsis thaliana At1g63170/F16M19_7 mRNA, com... 46 0.13
26emb|BX816783.1|CNS0ABR4 Arabidopsis thaliana Full-length cDNA Co... 46 0.13
27gb|AC010795.5|AC010795 Arabidopsis thaliana chromosome 1 BAC F16... 46 0.13
28gb|AY086095.1| Arabidopsis thaliana clone 21249 mRNA, complete s... 46 0.13
29ref|NM_115982.2| Arabidopsis thaliana protein binding / ubiquiti... 42 2.1
30ref|NM_191278.1| Oryza sativa (japonica cultivar-group), predic... 42 2.1
31gb|AE008429.1| Streptococcus pneumoniae R6 section 45 of 184 of ... 42 2.1
32gb|AC118733.8| Mus musculus chromosome 10, clone RP24-170A20, co... 42 2.1
33gb|AC119943.12| Mus musculus chromosome 10, clone RP24-271F24, c... 42 2.1
34emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome 3, B... 42 2.1
35gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell... 42 2.1
36gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell... 42 2.1
37gb|AC106899.5| Homo sapiens BAC clone RP11-734N2 from 2, complet... 42 2.1
38ref|NM_132116.1| Drosophila melanogaster CG14441-RA (CG14441), mRNA 42 2.1
39gb|AY064638.1| Arabidopsis thaliana putative protein (At3g61180;... 42 2.1
40gb|AY059830.1| Arabidopsis thaliana putative protein (At3g61180;... 42 2.1
41dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
42dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
43gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome 42 2.1
44dbj|AK108853.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
45gb|DQ327751.1| Drosophila melanogaster clone 62 mRNA sequence 42 2.1
46gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 ... 42 2.1
47gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 8.2
48ref|NM_188926.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.2
49ref|XM_508297.1| PREDICTED: Pan troglodytes similar to coatomer ... 40 8.2
50ref|NM_080781.2| Rattus norvegicus coatomer protein complex, sub... 40 8.2
51ref|XM_615637.2| PREDICTED: Bos taurus similar to coatomer prote... 40 8.2
52ref|XM_865359.1| PREDICTED: Bos taurus similar to coatomer prote... 40 8.2
53ref|XM_875628.1| PREDICTED: Bos taurus similar to coatomer prote... 40 8.2
54gb|BC061882.1| Rattus norvegicus coatomer protein complex, subun... 40 8.2
55emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 8.2
56emb|AL365225.13| Human DNA sequence from clone RP11-179A5 on chr... 40 8.2
57emb|X55763.1|OCCACBRE Rabbit mRNA for smooth muscle calcium chan... 40 8.2
58emb|X15539.1|OCCACHAN Rabbit mRNA for cardiac dihydropyridine-se... 40 8.2
59emb|CR859574.1| Pongo pygmaeus mRNA; cDNA DKFZp459K154 (from clo... 40 8.2
60emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segmen... 40 8.2
61gb|BC037280.2| Homo sapiens coatomer protein complex, subunit be... 40 8.2
62emb|AL136593.1|HSM801567 Homo sapiens mRNA; cDNA DKFZp761K102 (f... 40 8.2
63dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 8.2
64ref|NM_016451.3| Homo sapiens coatomer protein complex, subunit ... 40 8.2
65emb|CR605573.1| full-length cDNA clone CS0DL007YF21 of B cells (... 40 8.2
66gb|AE012004.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 8.2
67dbj|AK001203.1| Homo sapiens cDNA FLJ10341 fis, clone NT2RM20008... 40 8.2
68gb|AE012163.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 8.2
69ref|NM_135824.2| Drosophila melanogaster CG9014-RA (CG9014), mRNA 40 8.2
70gb|AC018943.10| Homo sapiens, clone RP11-24D15, complete sequence 40 8.2
71gb|AF111807.1|AF111807 Homo sapiens MSTP026 (MST026) mRNA, compl... 40 8.2
72gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 8.2
73gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, r... 40 8.2
74dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
75gb|AC018523.9|AC018523 Homo sapiens chromosome , clone RP11-140L... 40 8.2
76gb|AC171016.2| Gallus gallus BAC clone CH261-29C12 from chromoso... 40 8.2
77gb|BT003232.1| Drosophila melanogaster LP07794 full insert cDNA 40 8.2
78ref|XM_215498.3| PREDICTED: Rattus norvegicus similar to Hypothe... 40 8.2
79gb|AC012443.8| Homo sapiens BAC clone RP11-17G11 from 2, complet... 40 8.2
80gb|AC022188.13| Homo sapiens chromosome 15, clone RP11-8P11, com... 40 8.2
81dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
82emb|BX649261.3| Zebrafish DNA sequence from clone DKEY-215A8 in ... 40 8.2
83gb|AF084457.1| Homo sapiens beta-cop homolog mRNA, complete cds 40 8.2
84emb|X57228.1|RNBCOP Rat mRNA for beta COP 40 8.2
85gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50... 40 8.2
86gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 8.2
87dbj|AP004950.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 8.2
88gb|AC153551.4| Mus musculus 10 BAC RP23-383A7 (Roswell Park Canc... 40 8.2 
>ref|XM_473541.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 975

 Score =  345 bits (174), Expect = 1e-91
 Identities = 333/386 (86%)
 Strand = Plus / Minus

                                                                       
Query: 219 ttccggatgctgaacttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatg 278
           ||||||||  |||||||||||||||||||||| |||||||| |||||||| || || |||
Sbjct: 941 ttccggatattgaacttgcacagggggcatgttgcgttgatatgcagccatttatcaatg 882

                                                                       
Query: 279 caggcgcagtggaaatggtggccacaagggagttcacgcagctctgcaccatcgtcgtat 338
           ||||| |||||||||||||| |||||||| ||||||||||||||||||||||| || |||
Sbjct: 881 caggcacagtggaaatggtgcccacaaggaagttcacgcagctctgcaccatcatcatat 822

                                                                       
Query: 339 gctgaaatgcaaatgcagcactctgcatcttcagctgcaagtgctttctctataggttgg 398
           || |||| ||||||||| ||||| |||||||||| ||| ||| ||||||| |||||||| 
Sbjct: 821 gccgaaaggcaaatgcaacactccgcatcttcaggtgcgagtactttctcaataggttga 762

                                                                       
Query: 399 ttggtgccacactctgtcattattccaccagaagactcagtggcatcagcggaatccttt 458
           |||||||||||||||||||||||||||||| |||   | ||  ||||||| |  |  |||
Sbjct: 761 ttggtgccacactctgtcattattccaccaaaaggtcctgtctcatcagcagtttgtttt 702

                                                                       
Query: 459 tcaggttcatccaccctacggaatttgtatttcggaatttgccgaatgtcatcttcagat 518
           |||||||||||    || || ||||||||| | |||||||| ||||| |||||||| || 
Sbjct: 701 tcaggttcatctgttctccgaaatttgtatcttggaatttggcgaatatcatcttctgac 642

                                                                       
Query: 519 gctccttcctgatcagagacagcatacagaattgctataatgcaagggaggcagcaacaa 578
           ||||||||||||||||| || ||||| ||||| |||||||||||||| ||||||||||| 
Sbjct: 641 gctccttcctgatcagaaaccgcatagagaatagctataatgcaaggtaggcagcaacat 582

                                     
Query: 579 acggcaataccaataatgcaagccag 604
           || ||||||||||| |||||||||||
Sbjct: 581 acagcaataccaatgatgcaagccag 556
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>gb|AY224421.1| Oryza sativa (japonica cultivar-group) isolate 20115 ring zinc
           finger protein-like protein mRNA, complete cds
          Length = 753

 Score =  345 bits (174), Expect = 1e-91
 Identities = 333/386 (86%)
 Strand = Plus / Minus

                                                                       
Query: 219 ttccggatgctgaacttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatg 278
           ||||||||  |||||||||||||||||||||| |||||||| |||||||| || || |||
Sbjct: 719 ttccggatattgaacttgcacagggggcatgttgcgttgatatgcagccatttatcaatg 660

                                                                       
Query: 279 caggcgcagtggaaatggtggccacaagggagttcacgcagctctgcaccatcgtcgtat 338
           ||||| |||||||||||||| |||||||| ||||||||||||||||||||||| || |||
Sbjct: 659 caggcacagtggaaatggtgcccacaaggaagttcacgcagctctgcaccatcatcatat 600

                                                                       
Query: 339 gctgaaatgcaaatgcagcactctgcatcttcagctgcaagtgctttctctataggttgg 398
           || |||| ||||||||| ||||| |||||||||| ||| ||| ||||||| |||||||| 
Sbjct: 599 gccgaaaggcaaatgcaacactccgcatcttcaggtgcgagtactttctcaataggttga 540

                                                                       
Query: 399 ttggtgccacactctgtcattattccaccagaagactcagtggcatcagcggaatccttt 458
           |||||||||||||||||||||||||||||| |||   | ||  ||||||| |  |  |||
Sbjct: 539 ttggtgccacactctgtcattattccaccaaaaggtcctgtctcatcagcagtttgtttt 480

                                                                       
Query: 459 tcaggttcatccaccctacggaatttgtatttcggaatttgccgaatgtcatcttcagat 518
           |||||||||||    || || ||||||||| | |||||||| ||||| |||||||| || 
Sbjct: 479 tcaggttcatctgttctccgaaatttgtatcttggaatttggcgaatatcatcttctgac 420

                                                                       
Query: 519 gctccttcctgatcagagacagcatacagaattgctataatgcaagggaggcagcaacaa 578
           ||||||||||||||||| || ||||| ||||| |||||||||||||| ||||||||||| 
Sbjct: 419 gctccttcctgatcagaaaccgcatagagaatagctataatgcaaggtaggcagcaacat 360

                                     
Query: 579 acggcaataccaataatgcaagccag 604
           || ||||||||||| |||||||||||
Sbjct: 359 acagcaataccaatgatgcaagccag 334
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>dbj|AK070267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044P07, full
           insert sequence
          Length = 1309

 Score =  345 bits (174), Expect = 1e-91
 Identities = 333/386 (86%)
 Strand = Plus / Minus

                                                                       
Query: 219 ttccggatgctgaacttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatg 278
           ||||||||  |||||||||||||||||||||| |||||||| |||||||| || || |||
Sbjct: 890 ttccggatattgaacttgcacagggggcatgttgcgttgatatgcagccatttatcaatg 831

                                                                       
Query: 279 caggcgcagtggaaatggtggccacaagggagttcacgcagctctgcaccatcgtcgtat 338
           ||||| |||||||||||||| |||||||| ||||||||||||||||||||||| || |||
Sbjct: 830 caggcacagtggaaatggtgcccacaaggaagttcacgcagctctgcaccatcatcatat 771

                                                                       
Query: 339 gctgaaatgcaaatgcagcactctgcatcttcagctgcaagtgctttctctataggttgg 398
           || |||| ||||||||| ||||| |||||||||| ||| ||| ||||||| |||||||| 
Sbjct: 770 gccgaaaggcaaatgcaacactccgcatcttcaggtgcgagtactttctcaataggttga 711

                                                                       
Query: 399 ttggtgccacactctgtcattattccaccagaagactcagtggcatcagcggaatccttt 458
           |||||||||||||||||||||||||||||| |||   | ||  ||||||| |  |  |||
Sbjct: 710 ttggtgccacactctgtcattattccaccaaaaggtcctgtctcatcagcagtttgtttt 651

                                                                       
Query: 459 tcaggttcatccaccctacggaatttgtatttcggaatttgccgaatgtcatcttcagat 518
           |||||||||||    || || ||||||||| | |||||||| ||||| |||||||| || 
Sbjct: 650 tcaggttcatctgttctccgaaatttgtatcttggaatttggcgaatatcatcttctgac 591

                                                                       
Query: 519 gctccttcctgatcagagacagcatacagaattgctataatgcaagggaggcagcaacaa 578
           ||||||||||||||||| || ||||| ||||| |||||||||||||| ||||||||||| 
Sbjct: 590 gctccttcctgatcagaaaccgcatagagaatagctataatgcaaggtaggcagcaacat 531

                                     
Query: 579 acggcaataccaataatgcaagccag 604
           || ||||||||||| |||||||||||
Sbjct: 530 acagcaataccaatgatgcaagccag 505
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>gb|AY106270.1| Zea mays PCO071747 mRNA sequence
          Length = 983

 Score =  202 bits (102), Expect = 1e-48
 Identities = 183/210 (87%)
 Strand = Plus / Minus

                                                                       
Query: 219 ttccggatgctgaacttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatg 278
           ||||| ||| || ||||||||||||||||||| || |||||||| |||||||| ||||| 
Sbjct: 731 ttccgaatgttgtacttgcacagggggcatgttgcattgatgtgaagccacttatcgata 672

                                                                       
Query: 279 caggcgcagtggaaatggtggccacaagggagttcacgcagctctgcaccatcgtcgtat 338
           |||| ||||||||||||||| ||||| |||||||| |||| ||||||||  || ||||| 
Sbjct: 671 caggtgcagtggaaatggtgcccacaggggagttcgcgcaactctgcactgtcatcgtaa 612

                                                                       
Query: 339 gctgaaatgcaaatgcagcactctgcatcttcagctgcaagtgctttctctataggttgg 398
           || || | |||||| || |||||||||||||||||||||||  ||||||| |||||||| 
Sbjct: 611 gccgataggcaaatacaacactctgcatcttcagctgcaagcactttctcaataggttga 552

                                         
Query: 399 ttggtgccacactctgtcattattccacca 428
           ||||||||||||||| ||||||||||||||
Sbjct: 551 ttggtgccacactctatcattattccacca 522



 Score =  137 bits (69), Expect = 5e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                       
Query: 480 aatttgtatttcggaatttgccgaatgtcatcttcagatgctccttcctgatcagagaca 539
           ||||||||| | || ||||| ||||||||||||||||||||||||||||||||||| || 
Sbjct: 470 aatttgtatcttgggatttgacgaatgtcatcttcagatgctccttcctgatcagatact 411

                                                                       
Query: 540 gcatacagaattgctataatgcaagggaggcagcaacaaacggcaataccaataatgcaa 599
           ||||| ||||||||||| || ||||| ||||| ||||| || |||||||||||||| |||
Sbjct: 410 gcatagagaattgctatgatacaaggaaggcaacaacagacagcaataccaataatacaa 351

                
Query: 600 gccag 604
           |||||
Sbjct: 350 gccag 346
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>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06,
             complete sequence
          Length = 125196

 Score =  165 bits (83), Expect = 2e-37
 Identities = 128/143 (89%)
 Strand = Plus / Plus

                                                                         
Query: 219   ttccggatgctgaacttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatg 278
             ||||||||  |||||||||||||||||||||| |||||||| |||||||| || || |||
Sbjct: 56556 ttccggatattgaacttgcacagggggcatgttgcgttgatatgcagccatttatcaatg 56615

                                                                         
Query: 279   caggcgcagtggaaatggtggccacaagggagttcacgcagctctgcaccatcgtcgtat 338
             ||||| |||||||||||||| |||||||| ||||||||||||||||||||||| || |||
Sbjct: 56616 caggcacagtggaaatggtgcccacaaggaagttcacgcagctctgcaccatcatcatat 56675

                                    
Query: 339   gctgaaatgcaaatgcagcactc 361
             || |||| ||||||||| |||||
Sbjct: 56676 gccgaaaggcaaatgcaacactc 56698



 Score =  105 bits (53), Expect = 2e-19
 Identities = 140/169 (82%)
 Strand = Plus / Plus

                                                                         
Query: 363   gcatcttcagctgcaagtgctttctctataggttggttggtgccacactctgtcattatt 422
             |||||||||| ||| ||| ||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 57171 gcatcttcaggtgcgagtactttctcaataggttgattggtgccacactctgtcattatt 57230

                                                                         
Query: 423   ccaccagaagactcagtggcatcagcggaatccttttcaggttcatccaccctacggaat 482
             |||||| |||   | ||  ||||||| |  |  ||||||||||||||    || || |||
Sbjct: 57231 ccaccaaaaggtcctgtctcatcagcagtttgtttttcaggttcatctgttctccgaaat 57290

                                                              
Query: 483   ttgtatttcggaatttgccgaatgtcatcttcagatgctccttcctgat 531
             |||||| | |||||||| ||||| |||||||| || |||||||||||||
Sbjct: 57291 ttgtatcttggaatttggcgaatatcatcttctgacgctccttcctgat 57339



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                         
Query: 526   cctgatcagagacagcatacagaattgctataatgcaagggaggcagcaacaaacggcaa 585
             |||||||||| || ||||| ||||| |||||||||||||| ||||||||||| || ||||
Sbjct: 57445 cctgatcagaaaccgcatagagaatagctataatgcaaggtaggcagcaacatacagcaa 57504

                                
Query: 586   taccaataatgcaagccag 604
             ||||||| |||||||||||
Sbjct: 57505 taccaatgatgcaagccag 57523
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  165 bits (83), Expect = 2e-37
 Identities = 128/143 (89%)
 Strand = Plus / Plus

                                                                            
Query: 219      ttccggatgctgaacttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatg 278
                ||||||||  |||||||||||||||||||||| |||||||| |||||||| || || |||
Sbjct: 28565766 ttccggatattgaacttgcacagggggcatgttgcgttgatatgcagccatttatcaatg 28565825

                                                                            
Query: 279      caggcgcagtggaaatggtggccacaagggagttcacgcagctctgcaccatcgtcgtat 338
                ||||| |||||||||||||| |||||||| ||||||||||||||||||||||| || |||
Sbjct: 28565826 caggcacagtggaaatggtgcccacaaggaagttcacgcagctctgcaccatcatcatat 28565885

                                       
Query: 339      gctgaaatgcaaatgcagcactc 361
                || |||| ||||||||| |||||
Sbjct: 28565886 gccgaaaggcaaatgcaacactc 28565908



 Score =  105 bits (53), Expect = 2e-19
 Identities = 140/169 (82%)
 Strand = Plus / Plus

                                                                            
Query: 363      gcatcttcagctgcaagtgctttctctataggttggttggtgccacactctgtcattatt 422
                |||||||||| ||| ||| ||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 28566381 gcatcttcaggtgcgagtactttctcaataggttgattggtgccacactctgtcattatt 28566440

                                                                            
Query: 423      ccaccagaagactcagtggcatcagcggaatccttttcaggttcatccaccctacggaat 482
                |||||| |||   | ||  ||||||| |  |  ||||||||||||||    || || |||
Sbjct: 28566441 ccaccaaaaggtcctgtctcatcagcagtttgtttttcaggttcatctgttctccgaaat 28566500

                                                                 
Query: 483      ttgtatttcggaatttgccgaatgtcatcttcagatgctccttcctgat 531
                |||||| | |||||||| ||||| |||||||| || |||||||||||||
Sbjct: 28566501 ttgtatcttggaatttggcgaatatcatcttctgacgctccttcctgat 28566549



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                            
Query: 526      cctgatcagagacagcatacagaattgctataatgcaagggaggcagcaacaaacggcaa 585
                |||||||||| || ||||| ||||| |||||||||||||| ||||||||||| || ||||
Sbjct: 28566655 cctgatcagaaaccgcatagagaatagctataatgcaaggtaggcagcaacatacagcaa 28566714

                                   
Query: 586      taccaataatgcaagccag 604
                ||||||| |||||||||||
Sbjct: 28566715 taccaatgatgcaagccag 28566733



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 262      gcagccacttgtcgatgcaggcg 284
                |||||||||||||||||||||||
Sbjct: 29525762 gcagccacttgtcgatgcaggcg 29525784
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  137 bits (69), Expect = 5e-29
 Identities = 117/133 (87%)
 Strand = Plus / Plus

                                                                            
Query: 229      tgaacttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatgcaggcgcagt 288
                |||||||||| ||||| || ||||| |||||||||||||| || || |||||| | ||||
Sbjct: 27498990 tgaacttgcataggggacaagtcgcattgatgtgcagccatttatcaatgcagacacagt 27499049

                                                                            
Query: 289      ggaaatggtggccacaagggagttcacgcagctctgcaccatcgtcgtatgctgaaatgc 348
                |||||||||| ||||||||||| |||||||||||||||||||| || || ||||| | ||
Sbjct: 27499050 ggaaatggtgcccacaagggagctcacgcagctctgcaccatcatcatacgctgacaggc 27499109

                             
Query: 349      aaatgcagcactc 361
                |||||||||||||
Sbjct: 27499110 aaatgcagcactc 27499122



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                            
Query: 363      gcatcttcagctgcaagtgctttctctataggttggttggtgccacactctgtcattatt 422
                |||||||||||||||||| |||| || |||||||||||||||||||| ||| ||||||||
Sbjct: 27499945 gcatcttcagctgcaagtactttttcaataggttggttggtgccacattctatcattatt 27500004

                           
Query: 423      ccaccagaaga 433
                ||||| |||||
Sbjct: 27500005 ccaccggaaga 27500015



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                            
Query: 526      cctgatcagagacagcatacagaattgctataatgcaagggaggcagcaacaaacggcaa 585
                |||||||||| |||||||| | ||||||||| || || ||||||||||||||||| ||||
Sbjct: 27500827 cctgatcagacacagcatataaaattgctatgatacatgggaggcagcaacaaacagcaa 27500886

                                  
Query: 586      taccaataatgcaagcca 603
                | ||||| ||||||||||
Sbjct: 27500887 ttccaatgatgcaagcca 27500904
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>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0657H12
          Length = 142688

 Score =  137 bits (69), Expect = 5e-29
 Identities = 117/133 (87%)
 Strand = Plus / Plus

                                                                         
Query: 229   tgaacttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatgcaggcgcagt 288
             |||||||||| ||||| || ||||| |||||||||||||| || || |||||| | ||||
Sbjct: 90712 tgaacttgcataggggacaagtcgcattgatgtgcagccatttatcaatgcagacacagt 90771

                                                                         
Query: 289   ggaaatggtggccacaagggagttcacgcagctctgcaccatcgtcgtatgctgaaatgc 348
             |||||||||| ||||||||||| |||||||||||||||||||| || || ||||| | ||
Sbjct: 90772 ggaaatggtgcccacaagggagctcacgcagctctgcaccatcatcatacgctgacaggc 90831

                          
Query: 349   aaatgcagcactc 361
             |||||||||||||
Sbjct: 90832 aaatgcagcactc 90844



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                         
Query: 363   gcatcttcagctgcaagtgctttctctataggttggttggtgccacactctgtcattatt 422
             |||||||||||||||||| |||| || |||||||||||||||||||| ||| ||||||||
Sbjct: 91667 gcatcttcagctgcaagtactttttcaataggttggttggtgccacattctatcattatt 91726

                        
Query: 423   ccaccagaaga 433
             ||||| |||||
Sbjct: 91727 ccaccggaaga 91737



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                         
Query: 526   cctgatcagagacagcatacagaattgctataatgcaagggaggcagcaacaaacggcaa 585
             |||||||||| |||||||| | ||||||||| || || ||||||||||||||||| ||||
Sbjct: 92549 cctgatcagacacagcatataaaattgctatgatacatgggaggcagcaacaaacagcaa 92608

                               
Query: 586   taccaataatgcaagcca 603
             | ||||| ||||||||||
Sbjct: 92609 ttccaatgatgcaagcca 92626
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>ref|XM_477996.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1523

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                       
Query: 504 atgtcatcttcagatgctccttcctgatcagagacagcatacagaattgctataatgcaa 563
           ||||| |||||||||||||||||||||||||  |||||||| |  || || |||||||||
Sbjct: 827 atgtcctcttcagatgctccttcctgatcagttacagcatataagatagcaataatgcaa 768

                                        
Query: 564 gggaggcagcaacaaacggcaataccaat 592
           || ||||||||||| || ||||| |||||
Sbjct: 767 ggcaggcagcaacagacagcaatgccaat 739



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                        
Query: 224  gatgctgaacttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatgcaggc 283
            |||| |||||||||||||||| ||||| || || ||||| ||||||||||| ||||||| 
Sbjct: 1107 gatgttgaacttgcacaggggacatgttgcatttatgtgaagccacttgtctatgcaggt 1048

                        
Query: 284  gcagtggaaatg 295
             |||||||||||
Sbjct: 1047 acagtggaaatg 1036



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 399 ttggtgccacactctgtcattattccacc 427
           |||||||||||||| ||||||| ||||||
Sbjct: 932 ttggtgccacactcagtcattactccacc 904
to top
>dbj|AK067630.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113E15, full
           insert sequence
          Length = 1523

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                       
Query: 504 atgtcatcttcagatgctccttcctgatcagagacagcatacagaattgctataatgcaa 563
           ||||| |||||||||||||||||||||||||  |||||||| |  || || |||||||||
Sbjct: 827 atgtcctcttcagatgctccttcctgatcagttacagcatataagatagcaataatgcaa 768

                                        
Query: 564 gggaggcagcaacaaacggcaataccaat 592
           || ||||||||||| || ||||| |||||
Sbjct: 767 ggcaggcagcaacagacagcaatgccaat 739



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                        
Query: 224  gatgctgaacttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatgcaggc 283
            |||| |||||||||||||||| ||||| || || ||||| ||||||||||| ||||||| 
Sbjct: 1107 gatgttgaacttgcacaggggacatgttgcatttatgtgaagccacttgtctatgcaggt 1048

                        
Query: 284  gcagtggaaatg 295
             |||||||||||
Sbjct: 1047 acagtggaaatg 1036



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 399 ttggtgccacactctgtcattattccacc 427
           |||||||||||||| ||||||| ||||||
Sbjct: 932 ttggtgccacactcagtcattactccacc 904
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                            
Query: 224      gatgctgaacttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatgcaggc 283
                |||| |||||||||||||||| ||||| || || ||||| ||||||||||| ||||||| 
Sbjct: 16253426 gatgttgaacttgcacaggggacatgttgcatttatgtgaagccacttgtctatgcaggt 16253367

                            
Query: 284      gcagtggaaatg 295
                 |||||||||||
Sbjct: 16253366 acagtggaaatg 16253355



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                            
Query: 526      cctgatcagagacagcatacagaattgctataatgcaagggaggcagcaacaaacggcaa 585
                |||||||||  |||||||| |  || || ||||||||||| ||||||||||| || ||||
Sbjct: 16251299 cctgatcagttacagcatataagatagcaataatgcaaggcaggcagcaacagacagcaa 16251240

                       
Query: 586      taccaat 592
                | |||||
Sbjct: 16251239 tgccaat 16251233



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 504      atgtcatcttcagatgctccttcctg 529
                ||||| ||||||||||||||||||||
Sbjct: 16251889 atgtcctcttcagatgctccttcctg 16251864



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 399      ttggtgccacactctgtcattattccacc 427
                |||||||||||||| ||||||| ||||||
Sbjct: 16251994 ttggtgccacactcagtcattactccacc 16251966
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>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_H04
          Length = 151699

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                         
Query: 224   gatgctgaacttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatgcaggc 283
             |||| |||||||||||||||| ||||| || || ||||| ||||||||||| ||||||| 
Sbjct: 73864 gatgttgaacttgcacaggggacatgttgcatttatgtgaagccacttgtctatgcaggt 73805

                         
Query: 284   gcagtggaaatg 295
              |||||||||||
Sbjct: 73804 acagtggaaatg 73793



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                         
Query: 526   cctgatcagagacagcatacagaattgctataatgcaagggaggcagcaacaaacggcaa 585
             |||||||||  |||||||| |  || || ||||||||||| ||||||||||| || ||||
Sbjct: 71737 cctgatcagttacagcatataagatagcaataatgcaaggcaggcagcaacagacagcaa 71678

                    
Query: 586   taccaat 592
             | |||||
Sbjct: 71677 tgccaat 71671



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 504   atgtcatcttcagatgctccttcctg 529
             ||||| ||||||||||||||||||||
Sbjct: 72327 atgtcctcttcagatgctccttcctg 72302



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 399   ttggtgccacactctgtcattattccacc 427
             |||||||||||||| ||||||| ||||||
Sbjct: 72432 ttggtgccacactcagtcattactccacc 72404
to top
>gb|AY109309.1| Zea mays PCO140942 mRNA sequence
          Length = 458

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 80/96 (83%)
 Strand = Plus / Minus

                                                                       
Query: 224 gatgctgaacttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatgcaggc 283
           |||| ||||||||||||  |||||||| || || ||||| ||||||||||| || |||  
Sbjct: 166 gatgttgaacttgcacaatgggcatgtagcatttatgtgaagccacttgtctatacagct 107

                                               
Query: 284 gcagtggaaatggtggccacaagggagttcacgcag 319
           |||||| |||||||||   |||||||| ||||||||
Sbjct: 106 gcagtgaaaatggtggttgcaagggagctcacgcag 71
to top
>gb|BT017546.1| Zea mays clone EL01N0422H07.c mRNA sequence
          Length = 1064

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                       
Query: 224 gatgctgaacttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatgcaggc 283
           |||| ||||||||||||  |||||||| || || ||||| ||||||||||| || |||  
Sbjct: 702 gatgttgaacttgcacaatgggcatgtagcatttatgtgaagccacttgtctatacagct 643

                                            
Query: 284 gcagtggaaatggtggccacaagggagttcacg 316
           |||||| |||||||||   |||||||| |||||
Sbjct: 642 gcagtgaaaatggtggttgcaagggagctcacg 610
to top
>ref|NM_001035955.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc
            ion binding AT1G12760 transcript variant AT1G12760.2
            mRNA, complete cds
          Length = 1757

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 234  ttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatgcaggcgcagtggaaa 293
            ||||| || ||||| |||||||||||||  ||||| ||||| | ||| |  |||||||||
Sbjct: 1356 ttgcagagtgggcaagtcgcgttgatgtatagccatttgtctacgcatgaacagtggaaa 1297

                                
Query: 294  tggtggccacaagggagttc 313
            ||||| |||||||| |||||
Sbjct: 1296 tggtgtccacaaggtagttc 1277



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                        
Query: 522  ccttcctgatcagagacagcatacagaattgctataatgcaagggaggcagcaacaaacg 581
            |||||||||||||  ||||| |||| || ||| || ||||| || ||||| || ||||| 
Sbjct: 1065 ccttcctgatcagcaacagcgtacaaaactgcaatgatgcatggcaggcaacagcaaacc 1006

                                  
Query: 582  gcaataccaataatgcaagcca 603
            ||||| ||||||| ||| ||||
Sbjct: 1005 gcaattccaataacgcaggcca 984
to top
>ref|NM_101146.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc
            ion binding AT1G12760 transcript variant AT1G12760.1
            mRNA, complete cds
          Length = 1812

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 234  ttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatgcaggcgcagtggaaa 293
            ||||| || ||||| |||||||||||||  ||||| ||||| | ||| |  |||||||||
Sbjct: 1411 ttgcagagtgggcaagtcgcgttgatgtatagccatttgtctacgcatgaacagtggaaa 1352

                                
Query: 294  tggtggccacaagggagttc 313
            ||||| |||||||| |||||
Sbjct: 1351 tggtgtccacaaggtagttc 1332



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                        
Query: 522  ccttcctgatcagagacagcatacagaattgctataatgcaagggaggcagcaacaaacg 581
            |||||||||||||  ||||| |||| || ||| || ||||| || ||||| || ||||| 
Sbjct: 1120 ccttcctgatcagcaacagcgtacaaaactgcaatgatgcatggcaggcaacagcaaacc 1061

                                  
Query: 582  gcaataccaataatgcaagcca 603
            ||||| ||||||| ||| ||||
Sbjct: 1060 gcaattccaataacgcaggcca 1039
to top
>gb|BT000279.1| Arabidopsis thaliana unknown protein (At3g13380At1g12760) mRNA,
            complete cds
          Length = 1273

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 234  ttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatgcaggcgcagtggaaa 293
            ||||| || ||||| |||||||||||||  ||||| ||||| | ||| |  |||||||||
Sbjct: 1181 ttgcagagtgggcaagtcgcgttgatgtatagccatttgtctacgcatgaacagtggaaa 1122

                                
Query: 294  tggtggccacaagggagttc 313
            ||||| |||||||| |||||
Sbjct: 1121 tggtgtccacaaggtagttc 1102



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                       
Query: 522 ccttcctgatcagagacagcatacagaattgctataatgcaagggaggcagcaacaaacg 581
           |||||||||||||  ||||| |||| || ||| || ||||| || ||||| || ||||| 
Sbjct: 890 ccttcctgatcagcaacagcgtacaaaactgcaatgatgcatggcaggcaacagcaaacc 831

                                 
Query: 582 gcaataccaataatgcaagcca 603
           ||||| ||||||| ||| ||||
Sbjct: 830 gcaattccaataacgcaggcca 809
to top
>gb|AY136370.1| Arabidopsis thaliana unknown protein (At3g13380:At1g12760) mRNA,
            complete cds
          Length = 1808

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 234  ttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatgcaggcgcagtggaaa 293
            ||||| || ||||| |||||||||||||  ||||| ||||| | ||| |  |||||||||
Sbjct: 1407 ttgcagagtgggcaagtcgcgttgatgtatagccatttgtctacgcatgaacagtggaaa 1348

                                
Query: 294  tggtggccacaagggagttc 313
            ||||| |||||||| |||||
Sbjct: 1347 tggtgtccacaaggtagttc 1328



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                        
Query: 522  ccttcctgatcagagacagcatacagaattgctataatgcaagggaggcagcaacaaacg 581
            |||||||||||||  ||||| |||| || ||| || ||||| || ||||| || ||||| 
Sbjct: 1116 ccttcctgatcagcaacagcgtacaaaactgcaatgatgcatggcaggcaacagcaaacc 1057

                                  
Query: 582  gcaataccaataatgcaagcca 603
            ||||| ||||||| ||| ||||
Sbjct: 1056 gcaattccaataacgcaggcca 1035
to top
>gb|DQ059089.1| Arabidopsis thaliana RING domain protein (At1g12760) mRNA, complete
            cds
          Length = 1227

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 234  ttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatgcaggcgcagtggaaa 293
            ||||| || ||||| |||||||||||||  ||||| ||||| | ||| |  |||||||||
Sbjct: 1181 ttgcagagtgggcaagtcgcgttgatgtatagccatttgtctacgcatgaacagtggaaa 1122

                                
Query: 294  tggtggccacaagggagttc 313
            ||||| |||||||| |||||
Sbjct: 1121 tggtgtccacaaggtagttc 1102



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                       
Query: 522 ccttcctgatcagagacagcatacagaattgctataatgcaagggaggcagcaacaaacg 581
           |||||||||||||  ||||| |||| || ||| || ||||| || ||||| || ||||| 
Sbjct: 890 ccttcctgatcagcaacagcgtacaaaactgcaatgatgcatggcaggcaacagcaaacc 831

                                 
Query: 582 gcaataccaataatgcaagcca 603
           ||||| ||||||| ||| ||||
Sbjct: 830 gcaattccaataacgcaggcca 809
to top
>emb|BX814816.1|CNS0AAJM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB9ZA05 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1545

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 234  ttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatgcaggcgcagtggaaa 293
            ||||| || ||||| |||||||||||||  ||||| ||||| | ||| |  |||||||||
Sbjct: 1294 ttgcagagtgggcaagtcgcgttgatgtatagccatttgtctacgcatgaacagtggaaa 1235

                                
Query: 294  tggtggccacaagggagttc 313
            ||||| |||||||| |||||
Sbjct: 1234 tggtgtccacaaggcagttc 1215
to top
>gb|AC025417.4|AC025417 Genomic sequence for Arabidopsis thaliana BAC T12C24 from chromosome I,
              complete sequence
          Length = 106142

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                          
Query: 234    ttgcacagggggcatgtcgcgttgatgtgcagccacttgtcgatgcaggcgcagtggaaa 293
              ||||| || ||||| |||||||||||||  ||||| ||||| | ||| |  |||||||||
Sbjct: 100808 ttgcagagtgggcaagtcgcgttgatgtatagccatttgtctacgcatgaacagtggaaa 100749

                                  
Query: 294    tggtggccacaagggagttc 313
              ||||| |||||||| |||||
Sbjct: 100748 tggtgtccacaaggtagttc 100729
to top
>ref|NM_104995.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc
            ion binding AT1G63170 mRNA, complete cds
          Length = 1604

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 283  cgcagtggaaatggtggccacaagggagttc 313
            |||| |||||||||||||||||||| |||||
Sbjct: 1270 cgcaatggaaatggtggccacaaggaagttc 1240
to top
>ref|XM_473669.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 579

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 262 gcagccacttgtcgatgcaggcg 284
           |||||||||||||||||||||||
Sbjct: 421 gcagccacttgtcgatgcaggcg 399
to top
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16,
             complete sequence
          Length = 145739

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 262   gcagccacttgtcgatgcaggcg 284
             |||||||||||||||||||||||
Sbjct: 28451 gcagccacttgtcgatgcaggcg 28473
to top
>gb|AY058092.1| Arabidopsis thaliana At1g63170/F16M19_7 mRNA, complete cds
          Length = 1592

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 283  cgcagtggaaatggtggccacaagggagttc 313
            |||| |||||||||||||||||||| |||||
Sbjct: 1270 cgcaatggaaatggtggccacaaggaagttc 1240
to top
>emb|BX816783.1|CNS0ABR4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH68ZA08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1591

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 243  gggcatgtcgcgttgatgtgcagccacttgtcgatgcaggcgcagtggaaatggtggcca 302
            ||||| || ||||||||||  ||||| ||||| | ||| |  |||||||||||||| |||
Sbjct: 1319 gggcaagtggcgttgatgtatagccatttgtctacgcatgaacagtggaaatggtgtcca 1260

                       
Query: 303  caagggagttc 313
            ||||| |||||
Sbjct: 1259 caaggtagttc 1249
to top
>gb|AC010795.5|AC010795 Arabidopsis thaliana chromosome 1 BAC F16M19 genomic sequence, complete
             sequence
          Length = 100512

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 283   cgcagtggaaatggtggccacaagggagttc 313
             |||| |||||||||||||||||||| |||||
Sbjct: 78202 cgcaatggaaatggtggccacaaggaagttc 78172
to top
>gb|AY086095.1| Arabidopsis thaliana clone 21249 mRNA, complete sequence
          Length = 1589

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 283  cgcagtggaaatggtggccacaagggagttc 313
            |||| |||||||||||||||||||| |||||
Sbjct: 1254 cgcaatggaaatggtggccacaaggaagttc 1224
to top
>ref|NM_115982.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT3G61180 mRNA, complete cds
          Length = 1631

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 570 cagcaacaaacggcaataccaataa 594
           ||||||||||| |||||||||||||
Sbjct: 869 cagcaacaaacagcaataccaataa 845
to top
>ref|NM_191278.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 717

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 264 agccacttgtcgatgcaggcg 284
           |||||||||||||||||||||
Sbjct: 446 agccacttgtcgatgcaggcg 426
to top
>gb|AE008429.1| Streptococcus pneumoniae R6 section 45 of 184 of the complete genome
          Length = 10345

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 358  actctgcatcttcagctgcaa 378
            |||||||||||||||||||||
Sbjct: 7579 actctgcatcttcagctgcaa 7559
to top
>gb|AC118733.8| Mus musculus chromosome 10, clone RP24-170A20, complete sequence
          Length = 188335

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 30     agaactaattctgtaatatgg 50
              |||||||||||||||||||||
Sbjct: 163971 agaactaattctgtaatatgg 163991
to top
>gb|AC119943.12| Mus musculus chromosome 10, clone RP24-271F24, complete sequence
          Length = 174009

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 30     agaactaattctgtaatatgg 50
              |||||||||||||||||||||
Sbjct: 164768 agaactaattctgtaatatgg 164748
to top
>emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome 3, BAC clone T20K12
          Length = 109155

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 570   cagcaacaaacggcaataccaataa 594
             ||||||||||| |||||||||||||
Sbjct: 34864 cagcaacaaacagcaataccaataa 34840
to top
>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 191590

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 196   cgcttccgctgctgctcccgc 216
             |||||||||||||||||||||
Sbjct: 26859 cgcttccgctgctgctcccgc 26839
to top
>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 177941

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 196    cgcttccgctgctgctcccgc 216
              |||||||||||||||||||||
Sbjct: 130963 cgcttccgctgctgctcccgc 130943
to top
>gb|AC106899.5| Homo sapiens BAC clone RP11-734N2 from 2, complete sequence
          Length = 132562

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 424   caccagaagactcagtggcat 444
             |||||||||||||||||||||
Sbjct: 24748 caccagaagactcagtggcat 24728
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>ref|NM_132116.1| Drosophila melanogaster CG14441-RA (CG14441), mRNA
          Length = 3378

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 196 cgcttccgctgctgctcccgc 216
           |||||||||||||||||||||
Sbjct: 403 cgcttccgctgctgctcccgc 383
to top
>gb|AY064638.1| Arabidopsis thaliana putative protein (At3g61180; T20K12.80) mRNA,
           complete cds
          Length = 1246

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 570 cagcaacaaacggcaataccaataa 594
           ||||||||||| |||||||||||||
Sbjct: 755 cagcaacaaacagcaataccaataa 731
to top
>gb|AY059830.1| Arabidopsis thaliana putative protein (At3g61180; T20K12.80) mRNA,
           complete cds
          Length = 1613

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 570 cagcaacaaacggcaataccaataa 594
           ||||||||||| |||||||||||||
Sbjct: 851 cagcaacaaacagcaataccaataa 827
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 264      agccacttgtcgatgcaggcg 284
                |||||||||||||||||||||
Sbjct: 31704516 agccacttgtcgatgcaggcg 31704496
to top
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0503C12
          Length = 147180

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 264    agccacttgtcgatgcaggcg 284
              |||||||||||||||||||||
Sbjct: 118248 agccacttgtcgatgcaggcg 118228
to top
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 358    actctgcatcttcagctgcaa 378
              |||||||||||||||||||||
Sbjct: 546736 actctgcatcttcagctgcaa 546716
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>dbj|AK108853.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-A11, full
           insert sequence
          Length = 1150

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 264 agccacttgtcgatgcaggcg 284
           |||||||||||||||||||||
Sbjct: 624 agccacttgtcgatgcaggcg 604
to top
>gb|DQ327751.1| Drosophila melanogaster clone 62 mRNA sequence
          Length = 1480

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 196  cgcttccgctgctgctcccgc 216
            |||||||||||||||||||||
Sbjct: 1252 cgcttccgctgctgctcccgc 1232
to top
>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete
              sequence
          Length = 299943

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 196    cgcttccgctgctgctcccgc 216
              |||||||||||||||||||||
Sbjct: 172850 cgcttccgctgctgctcccgc 172830
to top
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 436     cagtggcatcagcggaatcc 455
               ||||||||||||||||||||
Sbjct: 2379457 cagtggcatcagcggaatcc 2379476
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>ref|NM_188926.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1758

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 203 gctgctgctcccgcccttcc 222
           ||||||||||||||||||||
Sbjct: 30  gctgctgctcccgcccttcc 49
to top
>ref|XM_508297.1| PREDICTED: Pan troglodytes similar to coatomer protein complex,
            subunit beta; beta coat protein (LOC451039), mRNA
          Length = 2834

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 560  gcaagggaggcagcaacaaa 579
            ||||||||||||||||||||
Sbjct: 1619 gcaagggaggcagcaacaaa 1600
to top
>ref|NM_080781.2| Rattus norvegicus coatomer protein complex, subunit beta 1 (Copb1),
            mRNA
          Length = 3348

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 560  gcaagggaggcagcaacaaa 579
            ||||||||||||||||||||
Sbjct: 1830 gcaagggaggcagcaacaaa 1811
to top
>ref|XM_615637.2| PREDICTED: Bos taurus similar to coatomer protein complex, subunit
            beta, transcript variant 2 (LOC535533), mRNA
          Length = 3201

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 560  gcaagggaggcagcaacaaa 579
            ||||||||||||||||||||
Sbjct: 1715 gcaagggaggcagcaacaaa 1696
to top
>ref|XM_865359.1| PREDICTED: Bos taurus similar to coatomer protein complex, subunit
            beta, transcript variant 3 (LOC535533), mRNA
          Length = 3260

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 560  gcaagggaggcagcaacaaa 579
            ||||||||||||||||||||
Sbjct: 1715 gcaagggaggcagcaacaaa 1696
to top
>ref|XM_875628.1| PREDICTED: Bos taurus similar to coatomer protein complex, subunit
            beta, transcript variant 4 (LOC535533), mRNA
          Length = 3245

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 560  gcaagggaggcagcaacaaa 579
            ||||||||||||||||||||
Sbjct: 1715 gcaagggaggcagcaacaaa 1696
to top
>gb|BC061882.1| Rattus norvegicus coatomer protein complex, subunit beta 1, mRNA
            (cDNA clone MGC:72331 IMAGE:5599357), complete cds
          Length = 3348

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 560  gcaagggaggcagcaacaaa 579
            ||||||||||||||||||||
Sbjct: 1830 gcaagggaggcagcaacaaa 1811
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     tgtcgatgcaggcgcagtgg 290
               ||||||||||||||||||||
Sbjct: 4241687 tgtcgatgcaggcgcagtgg 4241668
to top
>emb|AL365225.13| Human DNA sequence from clone RP11-179A5 on chromosome 1 Contains the
             5' end of the gene for membrane-associated guanylate
             kinase-related 3 (MAGI-3) and a CpG island, complete
             sequence
          Length = 98795

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   tgatcagagacagcatacag 547
             ||||||||||||||||||||
Sbjct: 79091 tgatcagagacagcatacag 79110
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>emb|X55763.1|OCCACBRE Rabbit mRNA for smooth muscle calcium channel blocker (CaCB) receptor
          Length = 7374

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 352  tgcagcactctgcatcttca 371
            ||||||||||||||||||||
Sbjct: 6164 tgcagcactctgcatcttca 6145
to top
>emb|X15539.1|OCCACHAN Rabbit mRNA for cardiac dihydropyridine-sensitive calcium channel
            protein
          Length = 7036

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 352  tgcagcactctgcatcttca 371
            ||||||||||||||||||||
Sbjct: 5826 tgcagcactctgcatcttca 5807
to top
>emb|CR859574.1| Pongo pygmaeus mRNA; cDNA DKFZp459K154 (from clone DKFZp459K154)
          Length = 3295

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 560  gcaagggaggcagcaacaaa 579
            ||||||||||||||||||||
Sbjct: 1822 gcaagggaggcagcaacaaa 1803
to top
>emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segment 7/7
          Length = 344615

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 436    cagtggcatcagcggaatcc 455
              ||||||||||||||||||||
Sbjct: 218981 cagtggcatcagcggaatcc 219000
to top
>gb|BC037280.2| Homo sapiens coatomer protein complex, subunit beta, mRNA (cDNA clone
            MGC:33032 IMAGE:4831366), complete cds
          Length = 3528

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 560  gcaagggaggcagcaacaaa 579
            ||||||||||||||||||||
Sbjct: 1974 gcaagggaggcagcaacaaa 1955
to top
>emb|AL136593.1|HSM801567 Homo sapiens mRNA; cDNA DKFZp761K102 (from clone DKFZp761K102)
          Length = 3330

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 560  gcaagggaggcagcaacaaa 579
            ||||||||||||||||||||
Sbjct: 1851 gcaagggaggcagcaacaaa 1832
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    tgtcgatgcaggcgcagtgg 290
              ||||||||||||||||||||
Sbjct: 827943 tgtcgatgcaggcgcagtgg 827962
to top
>ref|NM_016451.3| Homo sapiens coatomer protein complex, subunit beta (COPB), mRNA
          Length = 3528

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 560  gcaagggaggcagcaacaaa 579
            ||||||||||||||||||||
Sbjct: 1974 gcaagggaggcagcaacaaa 1955
to top
>emb|CR605573.1| full-length cDNA clone CS0DL007YF21 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 2004

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 560 gcaagggaggcagcaacaaa 579
           ||||||||||||||||||||
Sbjct: 555 gcaagggaggcagcaacaaa 536
to top
>gb|AE012004.1| Xanthomonas axonopodis pv. citri str. 306,  section 382 of 469 of the
            complete genome
          Length = 10477

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  tgtcgatgcaggcgcagtgg 290
            ||||||||||||||||||||
Sbjct: 7774 tgtcgatgcaggcgcagtgg 7755
to top
>dbj|AK001203.1| Homo sapiens cDNA FLJ10341 fis, clone NT2RM2000821, highly similar
           to COATOMER BETA SUBUNIT
          Length = 1637

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 560 gcaagggaggcagcaacaaa 579
           ||||||||||||||||||||
Sbjct: 927 gcaagggaggcagcaacaaa 908
to top
>gb|AE012163.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 71 of
             460 of the complete genome
          Length = 13936

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   tgtcgatgcaggcgcagtgg 290
             ||||||||||||||||||||
Sbjct: 11826 tgtcgatgcaggcgcagtgg 11845
to top
>ref|NM_135824.2| Drosophila melanogaster CG9014-RA (CG9014), mRNA
          Length = 1359

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 266 ccacttgtcgatgcaggcgc 285
           ||||||||||||||||||||
Sbjct: 287 ccacttgtcgatgcaggcgc 268
to top
>gb|AC018943.10| Homo sapiens, clone RP11-24D15, complete sequence
          Length = 152779

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   cggatgctgaacttgcacag 241
             ||||||||||||||||||||
Sbjct: 85414 cggatgctgaacttgcacag 85395
to top
>gb|AF111807.1|AF111807 Homo sapiens MSTP026 (MST026) mRNA, complete cds
          Length = 3265

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 560  gcaagggaggcagcaacaaa 579
            ||||||||||||||||||||
Sbjct: 1786 gcaagggaggcagcaacaaa 1767
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     tgtcgatgcaggcgcagtgg 290
               ||||||||||||||||||||
Sbjct: 4253792 tgtcgatgcaggcgcagtgg 4253773
to top
>gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, region 34D-34D, BAC clone
             BACR30I21, complete sequence
          Length = 161682

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   ccacttgtcgatgcaggcgc 285
             ||||||||||||||||||||
Sbjct: 53291 ccacttgtcgatgcaggcgc 53310
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 203      gctgctgctcccgcccttcc 222
                ||||||||||||||||||||
Sbjct: 20190217 gctgctgctcccgcccttcc 20190198
to top
>gb|AC018523.9|AC018523 Homo sapiens chromosome , clone RP11-140L24, complete sequence
          Length = 166507

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 560    gcaagggaggcagcaacaaa 579
              ||||||||||||||||||||
Sbjct: 129302 gcaagggaggcagcaacaaa 129283
to top
>gb|AC171016.2| Gallus gallus BAC clone CH261-29C12 from chromosome ul, complete sequence
          Length = 168140

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 370    cagctgcaagtgctttctctatag 393
              |||||||||| |||||||||||||
Sbjct: 101587 cagctgcaagagctttctctatag 101564
to top
>gb|BT003232.1| Drosophila melanogaster LP07794 full insert cDNA
          Length = 1379

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 266 ccacttgtcgatgcaggcgc 285
           ||||||||||||||||||||
Sbjct: 281 ccacttgtcgatgcaggcgc 262
to top
>ref|XM_215498.3| PREDICTED: Rattus norvegicus similar to Hypothetical protein
           FLJ25422 (predicted) (LOC294789), mRNA
          Length = 3773

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 39  tctgtaatatggacaacact 58
           ||||||||||||||||||||
Sbjct: 734 tctgtaatatggacaacact 753
to top
>gb|AC012443.8| Homo sapiens BAC clone RP11-17G11 from 2, complete sequence
          Length = 153610

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 510   tcttcagatgctccttcctg 529
             ||||||||||||||||||||
Sbjct: 61825 tcttcagatgctccttcctg 61806
to top
>gb|AC022188.13| Homo sapiens chromosome 15, clone RP11-8P11, complete sequence
          Length = 140176

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    cggatgctgaacttgcacag 241
              ||||||||||||||||||||
Sbjct: 116692 cggatgctgaacttgcacag 116711
to top
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0077M12
          Length = 145337

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   gctgctgctcccgcccttcc 222
             ||||||||||||||||||||
Sbjct: 56003 gctgctgctcccgcccttcc 55984
to top
>emb|BX649261.3| Zebrafish DNA sequence from clone DKEY-215A8 in linkage group 4, complete
              sequence
          Length = 147890

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 346    tgcaaatgcagcactctgcatctt 369
              |||| |||||||||||||||||||
Sbjct: 103203 tgcacatgcagcactctgcatctt 103180
to top
>gb|AF084457.1| Homo sapiens beta-cop homolog mRNA, complete cds
          Length = 3313

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 560  gcaagggaggcagcaacaaa 579
            ||||||||||||||||||||
Sbjct: 1818 gcaagggaggcagcaacaaa 1799
to top
>emb|X57228.1|RNBCOP Rat mRNA for beta COP
          Length = 3073

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 560  gcaagggaggcagcaacaaa 579
            ||||||||||||||||||||
Sbjct: 1761 gcaagggaggcagcaacaaa 1742
to top
>gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50 of 83 of the complete
             sequence
          Length = 304772

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   ccacttgtcgatgcaggcgc 285
             ||||||||||||||||||||
Sbjct: 69806 ccacttgtcgatgcaggcgc 69825
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    tgtcgatgcaggcgcagtgg 290
              ||||||||||||||||||||
Sbjct: 859639 tgtcgatgcaggcgcagtgg 859658
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>dbj|AP004950.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT42E10, TM0123,
             complete sequence
          Length = 79601

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   atgctgaaatgcaaatgcag 356
             ||||||||||||||||||||
Sbjct: 14552 atgctgaaatgcaaatgcag 14533
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>gb|AC153551.4| Mus musculus 10 BAC RP23-383A7 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 216106

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 570    cagcaacaaacggcaatacc 589
              ||||||||||||||||||||
Sbjct: 171019 cagcaacaaacggcaatacc 171000


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,714,971
Number of Sequences: 3902068
Number of extensions: 5714971
Number of successful extensions: 92647
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92241
Number of HSP's gapped (non-prelim): 406
length of query: 604
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 581
effective length of database: 17,143,297,704
effective search space: 9960255966024
effective search space used: 9960255966024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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