ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags32e23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_493874.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 563 bits (284), Expect = e-157 Identities = 443/496 (89%) Strand = Plus / Minus Query: 186 ggcacagtaggcagtcccatttcatcctcctgctgccggttcgccgggactgctgcatga 245 ||||| || |||| ||||| ||| ||||||||||||||||| | ||| | | || ||| Sbjct: 776 ggcactgtcggcaatcccaattcgtcctcctgctgccggtttggtggggcgggtgtgtga 717 Query: 246 ccacttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttgg 305 || ||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||| Sbjct: 716 cccgttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttga 657 Query: 306 aggtacgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctcg 365 |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 656 aggtacgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctcc 597 Query: 366 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 425 ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 596 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 537 Query: 426 tgtatttcattgctcacatccataagatccatcatctcgtcttgcatgctatctatatct 485 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 536 tgtatttcattgctcacatccataagatccatcatctcgtcttgcaagctatctatatct 477 Query: 486 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 545 |||| | ||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 476 tcaagcttgacagttttcatcattcctttcagctctttattggctgccttcattgcagtc 417 Query: 546 atagtctgttgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataa 605 || || || ||||||||||||| |||||| || |||||||||||||||||||| ||||| Sbjct: 416 atcgtttgctgagcatctttaagtccctctgatgcaaaagcaacttggtcaaggttatat 357 Query: 606 gtttggttgtacagcatgtcgcgctgtccttcatacatcttgcgctgcttgaggatcctc 665 |||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||| |||| Sbjct: 356 gtttggttgtacagcatgtcacgctgcccttcgtacattctgcgctgcttgaggaccctc 297 Query: 666 atggcgcgggccttga 681 |||||||| ||||||| Sbjct: 296 atggcgcgtgccttga 281
>dbj|AK104101.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H05, full insert sequence Length = 1005 Score = 563 bits (284), Expect = e-157 Identities = 443/496 (89%) Strand = Plus / Minus Query: 186 ggcacagtaggcagtcccatttcatcctcctgctgccggttcgccgggactgctgcatga 245 ||||| || |||| ||||| ||| ||||||||||||||||| | ||| | | || ||| Sbjct: 766 ggcactgtcggcaatcccaattcgtcctcctgctgccggtttggtggggcgggtgtgtga 707 Query: 246 ccacttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttgg 305 || ||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||| Sbjct: 706 cccgttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttga 647 Query: 306 aggtacgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctcg 365 |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 646 aggtacgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctcc 587 Query: 366 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 425 ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 586 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 527 Query: 426 tgtatttcattgctcacatccataagatccatcatctcgtcttgcatgctatctatatct 485 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 526 tgtatttcattgctcacatccataagatccatcatctcgtcttgcaagctatctatatct 467 Query: 486 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 545 |||| | ||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 466 tcaagcttgacagttttcatcattcctttcagctctttattggctgccttcattgcagtc 407 Query: 546 atagtctgttgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataa 605 || || || ||||||||||||| |||||| || |||||||||||||||||||| ||||| Sbjct: 406 atcgtttgctgagcatctttaagtccctctgatgcaaaagcaacttggtcaaggttatat 347 Query: 606 gtttggttgtacagcatgtcgcgctgtccttcatacatcttgcgctgcttgaggatcctc 665 |||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||| |||| Sbjct: 346 gtttggttgtacagcatgtcacgctgcccttcgtacattctgcgctgcttgaggaccctc 287 Query: 666 atggcgcgggccttga 681 |||||||| ||||||| Sbjct: 286 atggcgcgtgccttga 271
>dbj|AK065749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042C01, full insert sequence Length = 1112 Score = 563 bits (284), Expect = e-157 Identities = 443/496 (89%) Strand = Plus / Minus Query: 186 ggcacagtaggcagtcccatttcatcctcctgctgccggttcgccgggactgctgcatga 245 ||||| || |||| ||||| ||| ||||||||||||||||| | ||| | | || ||| Sbjct: 858 ggcactgtcggcaatcccaattcgtcctcctgctgccggtttggtggggcgggtgtgtga 799 Query: 246 ccacttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttgg 305 || ||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||| Sbjct: 798 cccgttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttga 739 Query: 306 aggtacgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctcg 365 |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 738 aggtacgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctcc 679 Query: 366 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 425 ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 678 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 619 Query: 426 tgtatttcattgctcacatccataagatccatcatctcgtcttgcatgctatctatatct 485 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 618 tgtatttcattgctcacatccataagatccatcatctcgtcttgcaagctatctatatct 559 Query: 486 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 545 |||| | ||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 558 tcaagcttgacagttttcatcattcctttcagctctttattggctgccttcattgcagtc 499 Query: 546 atagtctgttgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataa 605 || || || ||||||||||||| |||||| || |||||||||||||||||||| ||||| Sbjct: 498 atcgtttgctgagcatctttaagtccctctgatgcaaaagcaacttggtcaaggttatat 439 Query: 606 gtttggttgtacagcatgtcgcgctgtccttcatacatcttgcgctgcttgaggatcctc 665 |||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||| |||| Sbjct: 438 gtttggttgtacagcatgtcacgctgcccttcgtacattctgcgctgcttgaggaccctc 379 Query: 666 atggcgcgggccttga 681 |||||||| ||||||| Sbjct: 378 atggcgcgtgccttga 363
>dbj|AK061764.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B05, full insert sequence Length = 1005 Score = 563 bits (284), Expect = e-157 Identities = 443/496 (89%) Strand = Plus / Minus Query: 186 ggcacagtaggcagtcccatttcatcctcctgctgccggttcgccgggactgctgcatga 245 ||||| || |||| ||||| ||| ||||||||||||||||| | ||| | | || ||| Sbjct: 766 ggcactgtcggcaatcccaattcgtcctcctgctgccggtttggtggggcgggtgtgtga 707 Query: 246 ccacttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttgg 305 || ||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||| Sbjct: 706 cccgttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttga 647 Query: 306 aggtacgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctcg 365 |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 646 aggtacgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctcc 587 Query: 366 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 425 ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 586 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 527 Query: 426 tgtatttcattgctcacatccataagatccatcatctcgtcttgcatgctatctatatct 485 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 526 tgtatttcattgctcacatccataagatccatcatctcgtcttgcaagctatctatatct 467 Query: 486 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 545 |||| | ||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 466 tcaagcttgacagttttcatcattcctttcagctctttattggctgccttcattgcagtc 407 Query: 546 atagtctgttgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataa 605 || || || ||||||||||||| |||||| || |||||||||||||||||||| ||||| Sbjct: 406 atcgtttgctgagcatctttaagtccctctgatgcaaaagcaacttggtcaaggttatat 347 Query: 606 gtttggttgtacagcatgtcgcgctgtccttcatacatcttgcgctgcttgaggatcctc 665 |||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||| |||| Sbjct: 346 gtttggttgtacagcatgtcacgctgcccttcgtacattctgcgctgcttgaggaccctc 287 Query: 666 atggcgcgggccttga 681 |||||||| ||||||| Sbjct: 286 atggcgcgtgccttga 271
>gb|AY108730.1| Zea mays PCO062079 mRNA sequence Length = 1178 Score = 472 bits (238), Expect = e-130 Identities = 349/386 (90%) Strand = Plus / Minus Query: 296 gtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttccaaagc 355 ||||||||||||||| ||||||||||| | ||||| |||||||| |||||||||||||| Sbjct: 764 gtctggttggaggtaagatgggactgactctgattcgaagtccatgtcggcttccaaagc 705 Query: 356 atcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttctacc 415 ||| ||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||| || Sbjct: 704 atcgagctcccccataagttcttcctcatcgatgtcatctgggacgttgtagcttctgcc 645 Query: 416 aagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcatgct 475 ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| || Sbjct: 644 aagagtttcttgtatttcagtgctcacatccataagatccatcatctcatcttgcatact 585 Query: 476 atctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagcctt 535 ||| |||||||| | | ||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 584 atcaatatcttcgagcttgacagttttcatcatccctttgagctctttattggcagcctt 525 Query: 536 cattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttggtc 595 ||| ||||||||||| || ||||||||||||| |||||| | |||||||||||||||||| Sbjct: 524 catcgcagtcatagtttgctgagcatctttaagtccctctgccgcaaaagcaacttggtc 465 Query: 596 aagattataagtttggttgtacagcatgtcgcgctgtccttcatacatcttgcgctgctt 655 ||| ||||| ||||||||||| |||||||| ||||| ||||| |||||| |||||||||| Sbjct: 464 aaggttatatgtttggttgtagagcatgtcacgctgcccttcgtacatcctgcgctgctt 405 Query: 656 gaggatcctcatggcgcgggccttga 681 ||||| ||||||||| || ||||||| Sbjct: 404 gaggaccctcatggctcgtgccttga 379 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 168 gtacgaattgacgcgtgcggcacagtaggcagtcccatttcatcctcctgctgccggttc 227 |||||||| || || || ||||| ||||||| ||| | ||||||||||||||| |||| Sbjct: 880 gtacgaatggatgcttgtggcactgtaggcaatcctagctcatcctcctgctgctggttt 821 Query: 228 gccgggactgctgcatgaccacttggtgcagcaggtaag 266 ||||||||||||||||| ||| ||||||||||||||||| Sbjct: 820 gccgggactgctgcatggccagttggtgcagcaggtaag 782
>dbj|AK108287.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-D09, full insert sequence Length = 1018 Score = 208 bits (105), Expect = 2e-50 Identities = 291/353 (82%) Strand = Plus / Minus Query: 291 tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 350 |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || ||| Sbjct: 644 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 585 Query: 351 aaagcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagctt 410 |||||||| || || ||||| ||||| ||||| || | || || |||| ||||||||| Sbjct: 584 aaagcatccagttctcccattagttcttcctcatcaacatcgtcagggatgttgtagctt 525 Query: 411 ctaccaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgc 470 |||||||| | |||||||||||| |||||||||||||| || || ||||||| |||||| Sbjct: 524 ctaccaagggattcttgtatttcgttgctcacatccatcaggtcagtcatctcatcttgc 465 Query: 471 atgctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggca 530 || |||| || || |||||| |||| ||||||||||| || || |||||||||||||| Sbjct: 464 atattatcgatgtcctcaatcttgactgtcttcatcatacccttgagctctttattggcg 405 Query: 531 gccttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaact 590 |||||||| ||| |||| ||||| ||||| ||||| | || || | || ||||| ||| Sbjct: 404 gccttcatggcattcatggtctgctgagcgtctttgaggccatcggcagcgaaagcgact 345 Query: 591 tggtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacat 643 ||||| |||||||| || |||||||| ||||||| ||||||| |||| ||||| Sbjct: 344 tggtcgagattataggtctggttgtagagcatgttgcgctgttcttcgtacat 292
>ref|XM_549823.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1018 Score = 200 bits (101), Expect = 4e-48 Identities = 290/353 (82%) Strand = Plus / Minus Query: 291 tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 350 |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || ||| Sbjct: 644 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 585 Query: 351 aaagcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagctt 410 |||||||| || || ||||| ||||| ||||| || | || || |||| ||||||||| Sbjct: 584 aaagcatccagttctcccattagttcttcctcatcaacatcgtcagggatgttgtagctt 525 Query: 411 ctaccaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgc 470 |||||||| | |||||||||||| |||||||||||||| || || |||| || |||||| Sbjct: 524 ctaccaagggattcttgtatttcgttgctcacatccatcaggtcagtcatttcatcttgc 465 Query: 471 atgctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggca 530 || |||| || || |||||| |||| ||||||||||| || || |||||||||||||| Sbjct: 464 atattatcgatgtcctcaatcttgactgtcttcatcattcccttgagctctttattggcg 405 Query: 531 gccttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaact 590 |||||||| ||| |||| ||||| ||||| ||||| | || || | || ||||| ||| Sbjct: 404 gccttcatggcattcatggtctgctgagcgtctttgaggccatcggcagcgaaagcgact 345 Query: 591 tggtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacat 643 ||||| |||||||| || |||||||| ||||||| ||||||| |||| ||||| Sbjct: 344 tggtcgagattataggtctggttgtagagcatgttgcgctgttcttcgtacat 292
>gb|BT019051.1| Zea mays clone Contig572.F mRNA sequence Length = 910 Score = 188 bits (95), Expect = 2e-44 Identities = 245/295 (83%) Strand = Plus / Minus Query: 330 tcaaagtccatatcggcttccaaagcatcaagctcgcccataagttcctcctcgtcgatg 389 ||||| |||||||| | ||||||||||| ||||||||||| ||||| |||||||| | | Sbjct: 619 tcaaattccatatcagactccaaagcatctagctcgcccatcagttcttcctcgtcaacg 560 Query: 390 tcatctgggacattgtagcttctaccaagagtttcttgtatttcattgctcacatccata 449 ||||| |||| ||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 559 tcatcagggatgttgtagcttctaccaagagtttcttgtatctcattgctcacgtccatc 500 Query: 450 agatccatcatctcgtcttgcatgctatctatatcttcaatcctgacagtcttcatcatc 509 ||||| |||| || |||||||| |||| || || ||||| ||||||| |||||||| Sbjct: 499 agatctgtcatttcatcttgcatattatcaatttcatcaattttgacagttttcatcatt 440 Query: 510 cctttcagctctttattggcagccttcattgcagtcatagtctgttgagcatctttaatt 569 || || ||||| || || || |||||||||||| |||||||||| |||||||| || | Sbjct: 439 cccttgagctccttgtttgctgccttcattgcattcatagtctgctgagcatccttgagg 380 Query: 570 ccctccgacgcaaaagcaacttggtcaagattataagtttggttgtacagcatgt 624 || || | ||||| |||||||||| ||||| || ||||||||||||| ||||| Sbjct: 379 ccatcggcagcaaagccaacttggtcgagattgtaggtttggttgtacaacatgt 325 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 248 acttggtgcagcaggtaagttaagctcagaatcaa 282 ||||||||||||||||||||| || |||| ||||| Sbjct: 695 acttggtgcagcaggtaagttgaggtcagcatcaa 661
>gb|AY109125.1| Zea mays PCO100749 mRNA sequence Length = 978 Score = 188 bits (95), Expect = 2e-44 Identities = 245/295 (83%) Strand = Plus / Minus Query: 330 tcaaagtccatatcggcttccaaagcatcaagctcgcccataagttcctcctcgtcgatg 389 ||||| |||||||| | ||||||||||| ||||||||||| ||||| |||||||| | | Sbjct: 638 tcaaattccatatcagactccaaagcatctagctcgcccatcagttcttcctcgtcaacg 579 Query: 390 tcatctgggacattgtagcttctaccaagagtttcttgtatttcattgctcacatccata 449 ||||| |||| ||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 578 tcatcagggatgttgtagcttctaccaagagtttcttgtatctcattgctcacgtccatc 519 Query: 450 agatccatcatctcgtcttgcatgctatctatatcttcaatcctgacagtcttcatcatc 509 ||||| |||| || |||||||| |||| || || ||||| ||||||| |||||||| Sbjct: 518 agatctgtcatttcatcttgcatattatcaatttcatcaattttgacagttttcatcatt 459 Query: 510 cctttcagctctttattggcagccttcattgcagtcatagtctgttgagcatctttaatt 569 || || ||||| || || || |||||||||||| |||||||||| |||||||| || | Sbjct: 458 cccttgagctccttgtttgctgccttcattgcattcatagtctgctgagcatccttgagg 399 Query: 570 ccctccgacgcaaaagcaacttggtcaagattataagtttggttgtacagcatgt 624 || || | ||||| |||||||||| ||||| || ||||||||||||| ||||| Sbjct: 398 ccatcggcagcaaagccaacttggtcgagattgtaggtttggttgtacaacatgt 344 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 248 acttggtgcagcaggtaagttaagctcagaatcaa 282 ||||||||||||||||||||| || |||| ||||| Sbjct: 714 acttggtgcagcaggtaagttgaggtcagcatcaa 680
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 163 bits (82), Expect = 9e-37 Identities = 100/106 (94%) Strand = Plus / Minus Query: 366 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 425 ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 144784 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 144725 Query: 426 tgtatttcattgctcacatccataagatccatcatctcgtcttgca 471 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144724 tgtatttcattgctcacatccataagatccatcatctcgtcttgca 144679 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Minus Query: 250 ttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttggaggt 309 ||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||| |||| Sbjct: 145292 ttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttgaaggt 145233 Query: 310 acgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctc 364 |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 145232 acgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctc 145178 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Minus Query: 555 tgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataagtttggttg 614 ||||||||||||| |||||| || |||||||||||||||||||| ||||| ||||||||| Sbjct: 144364 tgagcatctttaagtccctctgatgcaaaagcaacttggtcaaggttatatgtttggttg 144305 Query: 615 tacagcatgtcgcgctgtccttc 637 ||||||||||| ||||| ||||| Sbjct: 144304 tacagcatgtcacgctgcccttc 144282 Score = 103 bits (52), Expect = 7e-19 Identities = 67/72 (93%) Strand = Plus / Minus Query: 476 atctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagcctt 535 |||||||||||||| | ||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 144537 atctatatcttcaagcttgacagttttcatcattcctttcagctctttattggctgcctt 144478 Query: 536 cattgcagtcat 547 |||||||||||| Sbjct: 144477 cattgcagtcat 144466 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 646 tgcgctgcttgaggatcctcatggcgcgggccttga 681 ||||||||||||||| |||||||||||| ||||||| Sbjct: 143588 tgcgctgcttgaggaccctcatggcgcgtgccttga 143553
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12, complete sequence Length = 160603 Score = 163 bits (82), Expect = 9e-37 Identities = 100/106 (94%) Strand = Plus / Minus Query: 366 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 425 ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 26968 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 26909 Query: 426 tgtatttcattgctcacatccataagatccatcatctcgtcttgca 471 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26908 tgtatttcattgctcacatccataagatccatcatctcgtcttgca 26863 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Minus Query: 250 ttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttggaggt 309 ||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||| |||| Sbjct: 27476 ttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttgaaggt 27417 Query: 310 acgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctc 364 |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 27416 acgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctc 27362 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Minus Query: 555 tgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataagtttggttg 614 ||||||||||||| |||||| || |||||||||||||||||||| ||||| ||||||||| Sbjct: 26548 tgagcatctttaagtccctctgatgcaaaagcaacttggtcaaggttatatgtttggttg 26489 Query: 615 tacagcatgtcgcgctgtccttc 637 ||||||||||| ||||| ||||| Sbjct: 26488 tacagcatgtcacgctgcccttc 26466 Score = 103 bits (52), Expect = 7e-19 Identities = 67/72 (93%) Strand = Plus / Minus Query: 476 atctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagcctt 535 |||||||||||||| | ||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 26721 atctatatcttcaagcttgacagttttcatcattcctttcagctctttattggctgcctt 26662 Query: 536 cattgcagtcat 547 |||||||||||| Sbjct: 26661 cattgcagtcat 26650 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 646 tgcgctgcttgaggatcctcatggcgcgggccttga 681 ||||||||||||||| |||||||||||| ||||||| Sbjct: 25772 tgcgctgcttgaggaccctcatggcgcgtgccttga 25737
>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10, complete sequence Length = 156772 Score = 163 bits (82), Expect = 9e-37 Identities = 100/106 (94%) Strand = Plus / Minus Query: 366 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 425 ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 144784 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 144725 Query: 426 tgtatttcattgctcacatccataagatccatcatctcgtcttgca 471 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144724 tgtatttcattgctcacatccataagatccatcatctcgtcttgca 144679 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Minus Query: 250 ttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttggaggt 309 ||||||||||||| ||||||||||||||||| ||||| | ||||| |||||||| |||| Sbjct: 145292 ttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttgaaggt 145233 Query: 310 acgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctc 364 |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 145232 acgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctc 145178 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Minus Query: 555 tgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataagtttggttg 614 ||||||||||||| |||||| || |||||||||||||||||||| ||||| ||||||||| Sbjct: 144364 tgagcatctttaagtccctctgatgcaaaagcaacttggtcaaggttatatgtttggttg 144305 Query: 615 tacagcatgtcgcgctgtccttc 637 ||||||||||| ||||| ||||| Sbjct: 144304 tacagcatgtcacgctgcccttc 144282 Score = 103 bits (52), Expect = 7e-19 Identities = 67/72 (93%) Strand = Plus / Minus Query: 476 atctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagcctt 535 |||||||||||||| | ||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 144537 atctatatcttcaagcttgacagttttcatcattcctttcagctctttattggctgcctt 144478 Query: 536 cattgcagtcat 547 |||||||||||| Sbjct: 144477 cattgcagtcat 144466 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 646 tgcgctgcttgaggatcctcatggcgcgggccttga 681 ||||||||||||||| |||||||||||| ||||||| Sbjct: 143588 tgcgctgcttgaggaccctcatggcgcgtgccttga 143553
>ref|NM_120567.1| Arabidopsis thaliana unknown protein AT5G04850 mRNA, complete cds Length = 978 Score = 139 bits (70), Expect = 1e-29 Identities = 238/294 (80%) Strand = Plus / Minus Query: 353 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 412 ||||||||||||||||| || || || ||||| |||||||| || ||||||||||| || Sbjct: 596 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 537 Query: 413 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 472 |||||| || ||||| |||||| ||| ||||||| | |||||||| || ||||||| Sbjct: 536 accaagtgtctcttgaatttcagaactctcatccattaagtccatcatatcatcttgcaa 477 Query: 473 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 532 |||||||||||| |||| |||| || |||||||| ||||||||||| || || |||| Sbjct: 476 attatctatatcttgaatcttgacggttttcatcattcctttcagctccttgttagcaga 417 Query: 533 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 592 || | || |||||||| |||||||||||||||| || || | ||||| | |||||| Sbjct: 416 ttttagcgctgtcatagtttgttgagcatctttaaggccttcagcagcaaatgaaacttg 357 Query: 593 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacatctt 646 ||||| ||| |||| || || || |||||||| || ||||||||||||||||| Sbjct: 356 atcaaggttaaaagtctgattatagagcatgtcacgttgtccttcatacatctt 303
>gb|AY142614.1| Arabidopsis thaliana unknown protein (At5g04850) mRNA, complete cds Length = 739 Score = 139 bits (70), Expect = 1e-29 Identities = 238/294 (80%) Strand = Plus / Minus Query: 353 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 412 ||||||||||||||||| || || || ||||| |||||||| || ||||||||||| || Sbjct: 510 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 451 Query: 413 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 472 |||||| || ||||| |||||| ||| ||||||| | |||||||| || ||||||| Sbjct: 450 accaagtgtctcttgaatttcagaactctcatccattaagtccatcatatcatcttgcaa 391 Query: 473 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 532 |||||||||||| |||| |||| || |||||||| ||||||||||| || || |||| Sbjct: 390 attatctatatcttgaatcttgacggttttcatcattcctttcagctccttgttagcaga 331 Query: 533 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 592 || | || |||||||| |||||||||||||||| || || | ||||| | |||||| Sbjct: 330 ttttagcgctgtcatagtttgttgagcatctttaaggccttcagcagcaaatgaaacttg 271 Query: 593 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacatctt 646 ||||| ||| |||| || || || |||||||| || ||||||||||||||||| Sbjct: 270 atcaaggttaaaagtctgattatagagcatgtcacgttgtccttcatacatctt 217
>gb|AF370241.1| Arabidopsis thaliana unknown protein (At5g04850) mRNA, complete cds Length = 963 Score = 139 bits (70), Expect = 1e-29 Identities = 238/294 (80%) Strand = Plus / Minus Query: 353 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 412 ||||||||||||||||| || || || ||||| |||||||| || ||||||||||| || Sbjct: 573 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 514 Query: 413 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 472 |||||| || ||||| |||||| ||| ||||||| | |||||||| || ||||||| Sbjct: 513 accaagtgtctcttgaatttcagaactctcatccattaagtccatcatatcatcttgcaa 454 Query: 473 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 532 |||||||||||| |||| |||| || |||||||| ||||||||||| || || |||| Sbjct: 453 attatctatatcttgaatcttgacggttttcatcattcctttcagctccttgttagcaga 394 Query: 533 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 592 || | || |||||||| |||||||||||||||| || || | ||||| | |||||| Sbjct: 393 ttttagcgctgtcatagtttgttgagcatctttaaggccttcagcagcaaatgaaacttg 334 Query: 593 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacatctt 646 ||||| ||| |||| || || || |||||||| || ||||||||||||||||| Sbjct: 333 atcaaggttaaaagtctgattatagagcatgtcacgttgtccttcatacatctt 280
>emb|BX832277.1|CNS0A11H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZF10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 922 Score = 139 bits (70), Expect = 1e-29 Identities = 238/294 (80%) Strand = Plus / Minus Query: 353 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 412 ||||||||||||||||| || || || ||||| |||||||| || ||||||||||| || Sbjct: 581 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 522 Query: 413 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 472 |||||| || ||||| |||||| ||| ||||||| | |||||||| || ||||||| Sbjct: 521 accaagtgtctcttgaatttcagaactctcatccattaagtccatcatatcatcttgcaa 462 Query: 473 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 532 |||||||||||| |||| |||| || |||||||| ||||||||||| || || |||| Sbjct: 461 attatctatatcttgaatcttgacggttttcatcattcctttcagctccttgttagcaga 402 Query: 533 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 592 || | || |||||||| |||||||||||||||| || || | ||||| | |||||| Sbjct: 401 ttttagcgctgtcatagtttgttgagcatctttaaggccttcagcagcaaatgaaacttg 342 Query: 593 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacatctt 646 ||||| ||| |||| || || || |||||||| || ||||||||||||||||| Sbjct: 341 atcaaggttaaaagtctgattatagagcatgtcacgttgtccttcatacatctt 288
>gb|AY088616.1| Arabidopsis thaliana clone 8440 mRNA, complete sequence Length = 978 Score = 139 bits (70), Expect = 1e-29 Identities = 238/294 (80%) Strand = Plus / Minus Query: 353 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 412 ||||||||||||||||| || || || ||||| |||||||| || ||||||||||| || Sbjct: 596 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 537 Query: 413 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 472 |||||| || ||||| |||||| ||| ||||||| | |||||||| || ||||||| Sbjct: 536 accaagtgtctcttgaatttcagaactctcatccattaagtccatcatatcatcttgcaa 477 Query: 473 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 532 |||||||||||| |||| |||| || |||||||| ||||||||||| || || |||| Sbjct: 476 attatctatatcttgaatcttgacggttttcatcattcctttcagctccttgttagcaga 417 Query: 533 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 592 || | || |||||||| |||||||||||||||| || || | ||||| | |||||| Sbjct: 416 ttttagcgctgtcatagtttgttgagcatctttaaggccttcagcagcaaatgaaacttg 357 Query: 593 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacatctt 646 ||||| ||| |||| || || || |||||||| || ||||||||||||||||| Sbjct: 356 atcaaggttaaaagtctgattatagagcatgtcacgttgtccttcatacatctt 303
>emb|BX832584.1|CNS0A12C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH82ZC12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 131 bits (66), Expect = 3e-27 Identities = 237/294 (80%) Strand = Plus / Minus Query: 353 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 412 ||||||||||||||||| || || || ||||| |||||||| || ||||||||||| || Sbjct: 569 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 510 Query: 413 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 472 |||||| || ||||| |||||| ||| ||||||| | |||||||| || ||||||| Sbjct: 509 accaagtgtctcttgaatttcagaactctcatccattaagtccatcatatcatcttgcaa 450 Query: 473 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 532 |||||||||||| |||| |||| || |||||||| ||||||||||| || || || Sbjct: 449 attatctatatcttgaatcttgacggttttcatcattcctttcagctccttgttatcata 390 Query: 533 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 592 || | ||| |||||||| |||||||||||||||| || || | ||||| | |||||| Sbjct: 389 ttttagtgctgtcatagtttgttgagcatctttaaggccttcagcagcaaatgaaacttg 330 Query: 593 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacatctt 646 ||||| ||| |||| || || || |||||||| || ||||||||||||||||| Sbjct: 329 atcaaggttaaaagtctgattatagagcatgtcacgttgtccttcatacatctt 276
>ref|NM_111900.3| Arabidopsis thaliana unknown protein AT3G10640 transcript variant AT3G10640.1 mRNA, complete cds Length = 1013 Score = 117 bits (59), Expect = 5e-23 Identities = 233/291 (80%) Strand = Plus / Minus Query: 353 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 412 |||||||||||| ||||| || || |||||||| | | |||| || | ||||||||| || Sbjct: 624 agcatcaagctctcccatgaggtcatcctcgtcaaggccatcaggaatattgtagctcct 565 Query: 413 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 472 |||||| | |||||| |||||| || |||||||| |||||||||||||||||||| | Sbjct: 564 accaagtgattcttgaatttcagaactaacatccatcagatccatcatctcgtcttgtaa 505 Query: 473 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 532 |||| ||||||| |||| |||| || |||||||| ||||||| ||| || || |||| Sbjct: 504 attatcaatatcttgaatcttgacggttttcatcattcctttcaactccttgttcgcaga 445 Query: 533 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 592 || | ||| |||||||| |||||||||||||| | ||| || | || || | |||||| Sbjct: 444 ttttagtgctgtcatagtttgttgagcatctttgagtccttcagcggcgaatgaaacttg 385 Query: 593 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacat 643 || ||||| | || || || || ||||||||||| |||||||||||||| Sbjct: 384 atcgagattgaatgtctgattatagagcatgtcgcgttgtccttcatacat 334
>ref|NM_202544.1| Arabidopsis thaliana unknown protein AT3G10640 transcript variant AT3G10640.2 mRNA, complete cds Length = 1266 Score = 117 bits (59), Expect = 5e-23 Identities = 233/291 (80%) Strand = Plus / Minus Query: 353 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 412 |||||||||||| ||||| || || |||||||| | | |||| || | ||||||||| || Sbjct: 877 agcatcaagctctcccatgaggtcatcctcgtcaaggccatcaggaatattgtagctcct 818 Query: 413 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 472 |||||| | |||||| |||||| || |||||||| |||||||||||||||||||| | Sbjct: 817 accaagtgattcttgaatttcagaactaacatccatcagatccatcatctcgtcttgtaa 758 Query: 473 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 532 |||| ||||||| |||| |||| || |||||||| ||||||| ||| || || |||| Sbjct: 757 attatcaatatcttgaatcttgacggttttcatcattcctttcaactccttgttcgcaga 698 Query: 533 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 592 || | ||| |||||||| |||||||||||||| | ||| || | || || | |||||| Sbjct: 697 ttttagtgctgtcatagtttgttgagcatctttgagtccttcagcggcgaatgaaacttg 638 Query: 593 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacat 643 || ||||| | || || || || ||||||||||| |||||||||||||| Sbjct: 637 atcgagattgaatgtctgattatagagcatgtcgcgttgtccttcatacat 587
>gb|BT014454.1| Lycopersicon esculentum clone 133801F, mRNA sequence Length = 1008 Score = 117 bits (59), Expect = 5e-23 Identities = 251/315 (79%) Strand = Plus / Minus Query: 329 ttcaaagtccatatcggcttccaaagcatcaagctcgcccataagttcctcctcgtcgat 388 |||||| ||||| || ||||||| |||||||||||||||||| || || || || || | Sbjct: 633 ttcaaactccatgtccgcttccagagcatcaagctcgcccatgagctcttcttcatcaac 574 Query: 389 gtcatctgggacattgtagcttctaccaagagtttcttgtatttcattgctcacatccat 448 |||||| || ||| |||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct: 573 gtcatcaggcacaccgtagcttctaccaagagtctcttgaatttcattgcttacatccat 514 Query: 449 aagatccatcatctcgtcttgcatgctatctatatcttcaatcctgacagtcttcatcat 508 || || |||| || ||||| | | |||||| |||| ||| || ||||| |||||||| Sbjct: 513 caggtctgtcatttcatcttgtaggttatctacgtcttgaatgctcacagttttcatcat 454 Query: 509 ccctttcagctctttattggcagccttcattgcagtcatagtctgttgagcatctttaat 568 ||||| | ||||| || || | ||||||||| | ||| || || ||||||||||| || Sbjct: 453 tccttttaattctttgttcgctgacttcattgctgccattgtttgctgagcatctttgat 394 Query: 569 tccctccgacgcaaaagcaacttggtcaagattataagtttggttgtacagcatgtcgcg 628 ||||| | ||||| | |||||||| | || || || || ||||| |||||||| || Sbjct: 393 cccctcagcagcaaacgagacttggtctaagttgtatgtctgattgtagagcatgtctcg 334 Query: 629 ctgtccttcatacat 643 ||| ||||||||||| Sbjct: 333 ctgaccttcatacat 319
>emb|BX823662.1|CNS0A6IH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS63ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1206 Score = 117 bits (59), Expect = 5e-23 Identities = 233/291 (80%) Strand = Plus / Minus Query: 353 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 412 |||||||||||| ||||| || || |||||||| | | |||| || | ||||||||| || Sbjct: 876 agcatcaagctctcccatgaggtcatcctcgtcaaggccatcaggaatattgtagctcct 817 Query: 413 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 472 |||||| | |||||| |||||| || |||||||| |||||||||||||||||||| | Sbjct: 816 accaagtgattcttgaatttcagaactaacatccatcagatccatcatctcgtcttgtaa 757 Query: 473 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 532 |||| ||||||| |||| |||| || |||||||| ||||||| ||| || || |||| Sbjct: 756 attatcaatatcttgaatcttgacggttttcatcattcctttcaactccttgttcgcaga 697 Query: 533 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 592 || | ||| |||||||| |||||||||||||| | ||| || | || || | |||||| Sbjct: 696 ttttagtgctgtcatagtttgttgagcatctttgagtccttcagcggcgaatgaaacttg 637 Query: 593 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacat 643 || ||||| | || || || || ||||||||||| |||||||||||||| Sbjct: 636 atcgagattgaatgtctgattatagagcatgtcgcgttgtccttcatacat 586
>gb|BT005859.1| Arabidopsis thaliana At3g10640 gene, complete cds Length = 708 Score = 117 bits (59), Expect = 5e-23 Identities = 233/291 (80%) Strand = Plus / Minus Query: 353 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 412 |||||||||||| ||||| || || |||||||| | | |||| || | ||||||||| || Sbjct: 510 agcatcaagctctcccatgaggtcatcctcgtcaaggccatcaggaatattgtagctcct 451 Query: 413 accaagagtttcttgtatttcattgctcacatccataagatccatcatctcgtcttgcat 472 |||||| | |||||| |||||| || |||||||| |||||||||||||||||||| | Sbjct: 450 accaagtgattcttgaatttcagaactaacatccatcagatccatcatctcgtcttgtaa 391 Query: 473 gctatctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagc 532 |||| ||||||| |||| |||| || |||||||| ||||||| ||| || || |||| Sbjct: 390 attatcaatatcttgaatcttgacggttttcatcattcctttcaactccttgttcgcaga 331 Query: 533 cttcattgcagtcatagtctgttgagcatctttaattccctccgacgcaaaagcaacttg 592 || | ||| |||||||| |||||||||||||| | ||| || | || || | |||||| Sbjct: 330 ttttagtgctgtcatagtttgttgagcatctttgagtccttcagcggcgaatgaaacttg 271 Query: 593 gtcaagattataagtttggttgtacagcatgtcgcgctgtccttcatacat 643 || ||||| | || || || || ||||||||||| |||||||||||||| Sbjct: 270 atcgagattgaatgtctgattatagagcatgtcgcgttgtccttcatacat 220
>gb|AF234647.1|AF234647 Triticum aestivum clone G1 gamma-gliadin gene, complete cds Length = 5718 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 551 ctgttgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataagtttg 610 |||||||||||||||||||| ||| | | ||||||||||||| |||| ||||||||| Sbjct: 217 ctgttgagcatctttaattcactctgttgtgtaagcaacttggtcgagataataagtttg 158 Query: 611 gttgtacagca 621 ||||||||||| Sbjct: 157 gttgtacagca 147
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 402 ttgtagcttctaccaagagtttcttgtatttcattgctcacatccat 448 ||||||||||||||||| | |||||||||||| |||||||||||||| Sbjct: 170802 ttgtagcttctaccaagggattcttgtatttcgttgctcacatccat 170848 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 291 tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 350 |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || ||| Sbjct: 170482 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 170541 Query: 351 aaagcatc 358 |||||||| Sbjct: 170542 aaagcatc 170549 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 486 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 545 |||||| |||| ||||||||||| || || |||||||||||||| |||||||| ||| || Sbjct: 171408 tcaatcttgactgtcttcatcattcccttgagctctttattggcggccttcatggcattc 171467 Query: 546 at 547 || Sbjct: 171468 at 171469
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 402 ttgtagcttctaccaagagtttcttgtatttcattgctcacatccat 448 ||||||||||||||||| | |||||||||||| |||||||||||||| Sbjct: 168604 ttgtagcttctaccaagggattcttgtatttcgttgctcacatccat 168650 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 291 tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 350 |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || ||| Sbjct: 168284 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 168343 Query: 351 aaagcatc 358 |||||||| Sbjct: 168344 aaagcatc 168351 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 486 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 545 |||||| |||| ||||||||||| || || |||||||||||||| |||||||| ||| || Sbjct: 169210 tcaatcttgactgtcttcatcattcccttgagctctttattggcggccttcatggcattc 169269 Query: 546 at 547 || Sbjct: 169270 at 169271
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 402 ttgtagcttctaccaagagtttcttgtatttcattgctcacatccat 448 ||||||||||||||||| | |||||||||||| |||||||||||||| Sbjct: 12472 ttgtagcttctaccaagggattcttgtatttcgttgctcacatccat 12518 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 291 tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 350 |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || ||| Sbjct: 12152 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 12211 Query: 351 aaagcatc 358 |||||||| Sbjct: 12212 aaagcatc 12219 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 486 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 545 |||||| |||| ||||||||||| || || |||||||||||||| |||||||| ||| || Sbjct: 13078 tcaatcttgactgtcttcatcattcccttgagctctttattggcggccttcatggcattc 13137 Query: 546 at 547 || Sbjct: 13138 at 13139
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 402 ttgtagcttctaccaagagtttcttgtatttcattgctcacatccat 448 ||||||||||||||||| | |||||||||||| |||||||||||||| Sbjct: 119348 ttgtagcttctaccaagggattcttgtatttcgttgctcacatccat 119394 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 291 tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 350 |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || ||| Sbjct: 119028 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 119087 Query: 351 aaagcatc 358 |||||||| Sbjct: 119088 aaagcatc 119095 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 486 tcaatcctgacagtcttcatcatccctttcagctctttattggcagccttcattgcagtc 545 |||||| |||| ||||||||||| || || |||||||||||||| |||||||| ||| || Sbjct: 119954 tcaatcttgactgtcttcatcattcccttgagctctttattggcggccttcatggcattc 120013 Query: 546 at 547 || Sbjct: 120014 at 120015
>gb|AC013428.6|ATAC013428 Arabidopsis thaliana chromosome III BAC F18K10 genomic sequence, complete sequence Length = 93985 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 401 attgtagcttctaccaagagtttcttgtatttcattgctcacatccataagatccatcat 460 ||||||||| |||||||| | |||||| |||||| || |||||||| ||||||||||| Sbjct: 81094 attgtagctcctaccaagtgattcttgaatttcagaactaacatccatcagatccatcat 81153 Query: 461 ctcgtcttg 469 ||||||||| Sbjct: 81154 ctcgtcttg 81162 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 618 agcatgtcgcgctgtccttcatac 641 ||||||||||| |||||||||||| Sbjct: 81489 agcatgtcgcgttgtccttcatac 81512
>gb|AC011560.6|AC011560 Arabidopsis thaliana chromosome 3 BAC F13M14 genomic sequence, complete sequence Length = 118107 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 401 attgtagcttctaccaagagtttcttgtatttcattgctcacatccataagatccatcat 460 ||||||||| |||||||| | |||||| |||||| || |||||||| ||||||||||| Sbjct: 23423 attgtagctcctaccaagtgattcttgaatttcagaactaacatccatcagatccatcat 23364 Query: 461 ctcgtcttg 469 ||||||||| Sbjct: 23363 ctcgtcttg 23355 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 618 agcatgtcgcgctgtccttcatac 641 ||||||||||| |||||||||||| Sbjct: 23028 agcatgtcgcgttgtccttcatac 23005
>gb|AF280605.1| Triticum aestivum omega gliadin storage protein gene, complete cds Length = 3789 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 476 atctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagcctt 535 |||||||||||||||||||||||| || ||||||| ||| |||||||||||| ||||| Sbjct: 1689 atctatatcttcaatcctgacagtttttctcatccccatcaactctttattggctgcctt 1630
>dbj|AB008271.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUK11 Length = 79073 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 381 tcgtcgatgtcatctgggacattgtagcttctaccaagagtttcttgtatttcattgctc 440 ||||| |||||||| || ||||||||||| |||||||| || ||||| |||||| ||| Sbjct: 56364 tcgtcaatgtcatcaggaacattgtagctcctaccaagtgtctcttgaatttcagaactc 56423 Query: 441 acatccataagatccatcatctcgtcttgca 471 ||||||| | |||||||| || ||||||| Sbjct: 56424 tcatccattaagtccatcatatcatcttgca 56454 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 476 atctatatcttcaatcctgacagtcttcatcatccctttcagctc 520 ||||||||||| |||| |||| || |||||||| ||||||||||| Sbjct: 56546 atctatatcttgaatcttgacggttttcatcattcctttcagctc 56590 Score = 44.1 bits (22), Expect = 0.60 Identities = 73/90 (81%) Strand = Plus / Plus Query: 552 tgttgagcatctttaattccctccgacgcaaaagcaacttggtcaagattataagtttgg 611 |||||||||||||||| || || | ||||| | |||||| ||||| ||| |||| || Sbjct: 56707 tgttgagcatctttaaggccttcagcagcaaatgaaacttgatcaaggttaaaagtctga 56766 Query: 612 ttgtacagcatgtcgcgctgtccttcatac 641 || || |||||||| || |||||||||||| Sbjct: 56767 ttatagagcatgtcacgttgtccttcatac 56796
>gb|AC169379.4| Sorghum bicolor clone SB_BBc0088B22, complete sequence Length = 105215 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 423 tcttgtatttcattgctcacatccataagatccatcatctc 463 ||||| |||| ||||||||||| ||| |||||||||||||| Sbjct: 103091 tcttgaattttattgctcacattcatgagatccatcatctc 103051
>gb|AF280606.1| Triticum aestivum omega gliadin pseudogene, complete sequence Length = 3925 Score = 48.1 bits (24), Expect = 0.038 Identities = 60/72 (83%) Strand = Plus / Minus Query: 476 atctatatcttcaatcctgacagtcttcatcatccctttcagctctttattggcagcctt 535 |||||||||||||||| ||| ||| || |||||| | ||| |||||||||||| || || Sbjct: 1702 atctatatcttcaatcttgatagtttttctcatccttatcaactctttattggctgcttt 1643 Query: 536 cattgcagtcat 547 |||| |||||| Sbjct: 1642 tattgtagtcat 1631
>emb|AL772177.2| Human DNA sequence from clone RP11-353A5 on chromosome 1, complete sequence Length = 7826 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 649 gctgcttgaggatcctcatgg 669 ||||||||||||||||||||| Sbjct: 2623 gctgcttgaggatcctcatgg 2643
>emb|AL353729.17| Human DNA sequence from clone RP11-290L7 on chromosome 9 Contains the 3' end of the CNTNAP3 gene for contactin associated protein-like 3, a TGF beta-inducible nuclear protein 1 (TINP1) pseudogene and a RNA binding motif protein 17 (RBM17) pseudogene, complete sequence Length = 195668 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 457 tcatctcgtcttgcatgctatctat 481 |||||| |||||||||||||||||| Sbjct: 50259 tcatctggtcttgcatgctatctat 50235
>ref|XM_690626.1| PREDICTED: Danio rerio similar to immunoglobulin superfamily, member 9 (LOC567334), mRNA Length = 3618 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 233 gactgctgcatgaccacttggtgca 257 |||||||||||||||||||| |||| Sbjct: 2708 gactgctgcatgaccacttgctgca 2684
>gb|AC101727.8| Mus musculus chromosome 1, clone RP23-327G3, complete sequence Length = 196065 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 ttcattgcagtcatagtctg 553 |||||||||||||||||||| Sbjct: 2826 ttcattgcagtcatagtctg 2845
>ref|XM_364506.1| Magnaporthe grisea 70-15 predicted protein (MG09420.4) partial mRNA Length = 903 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 accaagagtttcttgtattt 432 |||||||||||||||||||| Sbjct: 262 accaagagtttcttgtattt 243
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 tgctatctatatcttcaatc 491 |||||||||||||||||||| Sbjct: 29155 tgctatctatatcttcaatc 29174
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 tgctatctatatcttcaatc 491 |||||||||||||||||||| Sbjct: 22433908 tgctatctatatcttcaatc 22433927
>ref|XM_747329.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g10560) partial mRNA Length = 1389 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 tcagaatcaagatcagtctc 292 |||||||||||||||||||| Sbjct: 487 tcagaatcaagatcagtctc 468
>gb|AC112154.4| Mus musculus BAC clone RP24-98L2 from chromosome 1, complete sequence Length = 200202 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 ttcattgcagtcatagtctg 553 |||||||||||||||||||| Sbjct: 44934 ttcattgcagtcatagtctg 44953
>gb|AC091623.2| Sus scrofa clone RP44-183E24, complete sequence Length = 200062 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gatcaaacctacaccatagc 150 |||||||||||||||||||| Sbjct: 34462 gatcaaacctacaccatagc 34443
>gb|DQ153192.1| Sus scrofa CKM gene, promoter region and complete cds Length = 12338 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 catttcatcctcctgctgcc 222 |||||||||||||||||||| Sbjct: 3018 catttcatcctcctgctgcc 3037
>emb|CR788268.5| Human DNA sequence from clone RP11-24B13 on chromosome 9 Contains the 3' end of the gene for a novel protein similar to contactin associated protein-like 3 (CNTNAP3) and an RNA binding motif protein 17 (RBM17) pseudogene, complete sequence Length = 164026 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 457 tcatctcgtcttgcatgctatcta 480 |||||| ||||||||||||||||| Sbjct: 74219 tcatctggtcttgcatgctatcta 74196
>emb|BX005040.12| Human DNA sequence from clone RP11-101E5 on chromosome 9 Contains two novel genes, a novel protein similar to chromosome 9 open reading frame 36 (C9orf36), a 6-pyruvoyltetrahydropterin synthase (PTS) pseudogene, the 5' end of a pseudogene similar to part of contactin associated protein-like family, a novel pseudogene and a CpG island, complete sequence Length = 171762 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 457 tcatctcgtcttgcatgctatcta 480 |||||| ||||||||||||||||| Sbjct: 130655 tcatctggtcttgcatgctatcta 130632
>emb|BX005195.5| Human DNA sequence from clone RP11-203I2 on chromosome 9 Contains the 3' end of a pseudogene similar to part of contactin associated protein-like family and a pseudogene similar to part of a vomeronasal receptor, complete sequence Length = 174843 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 457 tcatctcgtcttgcatgctatcta 480 |||||| ||||||||||||||||| Sbjct: 14260 tcatctggtcttgcatgctatcta 14237
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 tttcatcctcctgctgccgg 224 |||||||||||||||||||| Sbjct: 18006 tttcatcctcctgctgccgg 17987
>emb|CR555305.5| Mouse DNA sequence from clone CH25-525H24 on chromosome 11, complete sequence Length = 121111 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 531 gccttcattgcagtcatagtctgt 554 ||||||||||||||||||| |||| Sbjct: 48187 gccttcattgcagtcataggctgt 48164
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 tgctatctatatcttcaatc 491 |||||||||||||||||||| Sbjct: 22426937 tgctatctatatcttcaatc 22426956
>gb|AC090983.13| Homo sapiens chromosome 15, clone RP11-385H1, complete sequence Length = 203244 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gatgtcatctgggacattgt 405 |||||||||||||||||||| Sbjct: 136131 gatgtcatctgggacattgt 136150
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 actgctgcatgaccacttggtgca 257 |||||||||||||| ||||||||| Sbjct: 2675456 actgctgcatgaccccttggtgca 2675479
>gb|AC175052.2| Mus musculus chromosome 19, clone wi1-2093M24, complete sequence Length = 37627 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 531 gccttcattgcagtcatagtctgt 554 ||||||||||||||||||| |||| Sbjct: 7886 gccttcattgcagtcataggctgt 7909
>gb|AF000227.1|SCAF000227 Secale cereale omega secalin gene, complete cds Length = 9248 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 448 taagatccatcatctcgtcttgcatgct 475 |||||| |||||||| |||||||||||| Sbjct: 2146 taagatacatcatcttgtcttgcatgct 2119
>gb|M24219.1|HSERPT Rabbit gammaherpesvirus gene repeat motifs, complete cds Length = 925 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ggttcgccgggactgctgca 242 |||||||||||||||||||| Sbjct: 675 ggttcgccgggactgctgca 694
>emb|AL714012.19| Mouse DNA sequence from clone RP23-238N3 on chromosome X, complete sequence Length = 120361 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 cagtcccatttcatcctcct 216 |||||||||||||||||||| Sbjct: 44067 cagtcccatttcatcctcct 44048 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,532,577 Number of Sequences: 3902068 Number of extensions: 5532577 Number of successful extensions: 104781 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104441 Number of HSP's gapped (non-prelim): 325 length of query: 681 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 658 effective length of database: 17,143,297,704 effective search space: 11280289889232 effective search space used: 11280289889232 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
