>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                            
Query: 256      agtcagtctgccattcatttgcatcagctggnttccagattgaatggctgcagcagttga 315
                |||||||||||| | ||| | |||||||||| ||| |||||||  ||  |||||| ||||
Sbjct: 19889289 agtcagtctgccctccatcttcatcagctggattctagattgatcgggcgcagcatttga 19889230

                                                                            
Query: 316      gcagactttcgccttcgctttccttcaggagncaatctgactgatgccttaactgaaacc 375
                |  ||| | |||||||||||||| || |||| || | | | ||| | ||| |||| ||||
Sbjct: 19889229 gttgacctccgccttcgctttccatctggagtcagtttaattgacgtcttcactggaacc 19889170

                            
Query: 376      ttgccattttta 387
                ||||||||||||
Sbjct: 19889169 ttgccattttta 19889158

>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0036M16
          Length = 158880

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                         
Query: 256   agtcagtctgccattcatttgcatcagctggnttccagattgaatggctgcagcagttga 315
             |||||||||||| | ||| | |||||||||| ||| |||||||  ||  |||||| ||||
Sbjct: 53939 agtcagtctgccctccatcttcatcagctggattctagattgatcgggcgcagcatttga 53880

                                                                         
Query: 316   gcagactttcgccttcgctttccttcaggagncaatctgactgatgccttaactgaaacc 375
             |  ||| | |||||||||||||| || |||| || | | | ||| | ||| |||| ||||
Sbjct: 53879 gttgacctccgccttcgctttccatctggagtcagtttaattgacgtcttcactggaacc 53820

                         
Query: 376   ttgccattttta 387
             ||||||||||||
Sbjct: 53819 ttgccattttta 53808

>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0650C03
          Length = 144337

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                          
Query: 256    agtcagtctgccattcatttgcatcagctggnttccagattgaatggctgcagcagttga 315
              |||||||||||| | ||| | |||||||||| ||| |||||||  ||  |||||| ||||
Sbjct: 129448 agtcagtctgccctccatcttcatcagctggattctagattgatcgggcgcagcatttga 129389

                                                                          
Query: 316    gcagactttcgccttcgctttccttcaggagncaatctgactgatgccttaactgaaacc 375
              |  ||| | |||||||||||||| || |||| || | | | ||| | ||| |||| ||||
Sbjct: 129388 gttgacctccgccttcgctttccatctggagtcagtttaattgacgtcttcactggaacc 129329

                          
Query: 376    ttgccattttta 387
              ||||||||||||
Sbjct: 129328 ttgccattttta 129317

>dbj|AK121812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098C24, full
            insert sequence
          Length = 2185

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                        
Query: 256  agtcagtctgccattcatttgcatcagctggnttccagattgaatggctgcagcagttga 315
            |||||||||||| | ||| | |||||||||  ||| |||||||  ||  |||||| ||||
Sbjct: 1926 agtcagtctgccctccatcttcatcagctgtattctagattgatcgggcgcagcatttga 1867

                                                                        
Query: 316  gcagactttcgccttcgctttccttcaggagncaatctgactgatgccttaactgaaacc 375
            |  ||| | |||||||||||||| || |||| || | | | ||| | ||| |||| ||||
Sbjct: 1866 gttgacctccgccttcgctttccatctggagtcagtttaattgacgtcttcactggaacc 1807

                        
Query: 376  ttgccattttta 387
            ||||||||||||
Sbjct: 1806 ttgccattttta 1795

>ref|XM_478424.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2115

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 87/109 (79%)
 Strand = Plus / Minus

                                                                        
Query: 279  tcagctggnttccagattgaatggctgcagcagttgagcagactttcgccttcgctttcc 338
            |||||||| ||| |||||||  ||  |||||| |||||  ||| | ||||||||||||||
Sbjct: 2115 tcagctggattctagattgatcgggcgcagcatttgagttgacctccgccttcgctttcc 2056

                                                             
Query: 339  ttcaggagncaatctgactgatgccttaactgaaaccttgccattttta 387
             || |||| || | | | ||| | ||| |||| ||||||||||||||||
Sbjct: 2055 atctggagtcagtttaattgacgtcttcactggaaccttgccattttta 2007

>gb|AC068655.3|AC068655 Genomic Sequence For Arabidopsis thaliana Clone F17K4 From Chromosome
             V, complete sequence
          Length = 89453

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 203   gagaaactcagcaatacaagag 224
             ||||||||||||||||||||||
Sbjct: 19864 gagaaactcagcaatacaagag 19885

>gb|AC034194.5| Homo sapiens chromosome 3 clone RP11-669E3 map 3p, complete sequence
          Length = 179255

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 78     ttgtacatatacaccatctattact 102
              |||||||||||||||||||| ||||
Sbjct: 107089 ttgtacatatacaccatctaatact 107113

>gb|AF490259.2| Chikungunya virus strain Ross, complete genome
          Length = 11791

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 382  tttttaggtggctgcttctt 401
            ||||||||||||||||||||
Sbjct: 7835 tttttaggtggctgcttctt 7816

>gb|AC112663.9| Mus musculus chromosome 5, clone RP23-465J5, complete sequence
          Length = 228717

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 177    tcaacaacattgatcaggaaaagg 200
              |||||||||||||| |||||||||
Sbjct: 132390 tcaacaacattgataaggaaaagg 132413

>gb|AC004142.2| Homo sapiens BAC clone CTB-118D7 from 7, complete sequence
          Length = 166126

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    tcaattgtacatatacacca 93
             ||||||||||||||||||||
Sbjct: 85513 tcaattgtacatatacacca 85532

>emb|AL592049.3| Human DNA sequence from clone RP11-747I9 on chromosome Xq11.1-12
             Contains a novel pseudogene, complete sequence
          Length = 104353

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   actatcaacaacattgatca 192
             ||||||||||||||||||||
Sbjct: 12588 actatcaacaacattgatca 12607

>emb|BX322660.9| Zebrafish DNA sequence from clone DKEYP-4C7 in linkage group 13, complete
              sequence
          Length = 173972

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 355    actgatgccttaactgaaaccttg 378
              ||||||||||||||||| ||||||
Sbjct: 126496 actgatgccttaactgacaccttg 126519

>gb|DQ443544.1| Chikungunya virus strain LR2006_OPY1, complete genome
          Length = 11763

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 382  tttttaggtggctgcttctt 401
            ||||||||||||||||||||
Sbjct: 7836 tttttaggtggctgcttctt 7817

>gb|DQ378282.1| Drosophila virilis strain Tucson 15010-1001.10 chromosome 4 fosmids
             15E14 and 12E24, complete sequence
          Length = 61074

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    aatatacatacataacagca 67
             ||||||||||||||||||||
Sbjct: 15652 aatatacatacataacagca 15633

>emb|BX855621.15| Zebrafish DNA sequence from clone CH211-225C13, complete sequence
          Length = 178447

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   gtctgccattcatttgcatc 280
             ||||||||||||||||||||
Sbjct: 33846 gtctgccattcatttgcatc 33827

>dbj|AB056416.1| Macaca fascicularis brain cDNA, clone:QflA-14362, similar to human
            hypothetical protein AF451991, AF451991
          Length = 2767

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 60   taacagcacaatgatcaattgtac 83
            ||||||||||||||| ||||||||
Sbjct: 2405 taacagcacaatgataaattgtac 2428

>gb|AF339485.1| Chikungunya virus strain S27 nonstructural protein 4 gene, partial
           cds; and structural polyprotein precursor, gene,
           complete cds
          Length = 4885

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 382 tttttaggtggctgcttctt 401
           ||||||||||||||||||||
Sbjct: 907 tttttaggtggctgcttctt 888

>gb|AF369024.2| Chikungunya virus strain S27-African prototype, complete genome
          Length = 11826

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 382  tttttaggtggctgcttctt 401
            ||||||||||||||||||||
Sbjct: 7835 tttttaggtggctgcttctt 7816

>gb|AC007067.4|AC007067 Genomic sequence for Arabidopsis thaliana BAC T10O24 from Chromosome 1,
             complete sequence
          Length = 89934

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 383   ttttaggtggctgcttctta 402
             ||||||||||||||||||||
Sbjct: 69692 ttttaggtggctgcttctta 69711

>dbj|AB110784.1| Vibrio mimicus matC, matD, matB, iucA, iucB, iucC, iucD, iutA genes
            and methyl accepting chemotaxis gene, complete cds
          Length = 13807

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 380  catttttaggtggctgcttc 399
            ||||||||||||||||||||
Sbjct: 2212 catttttaggtggctgcttc 2231

>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 83      catatacaccatctattact 102
               ||||||||||||||||||||
Sbjct: 1686113 catatacaccatctattact 1686094

>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 77      attgtacatatacaccatct 96
               ||||||||||||||||||||
Sbjct: 2392206 attgtacatatacaccatct 2392187

>gb|AC000114.1|HSAC000114 Human PAC clone DJ527C21 from Xq23, complete sequence
          Length = 172151

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 247    tttaaggtcagtcagtctgc 266
              ||||||||||||||||||||
Sbjct: 111008 tttaaggtcagtcagtctgc 110989

>emb|AL731678.17| Mouse DNA sequence from clone RP23-39H12 on chromosome X, complete
              sequence
          Length = 230186

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 380    catttttaggtggctgcttc 399
              ||||||||||||||||||||
Sbjct: 188831 catttttaggtggctgcttc 188850

>emb|AJ243681.1|GMA243681 Gigantolina magna 18S rRNA gene, partial
          Length = 2873

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 387  aggtggctgcttcttagagg 406
            ||||||||||||||||||||
Sbjct: 2453 aggtggctgcttcttagagg 2472


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,341,916
Number of Sequences: 3902068
Number of extensions: 4341916
Number of successful extensions: 86442
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86336
Number of HSP's gapped (non-prelim): 106
length of query: 417
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 395
effective length of database: 17,147,199,772
effective search space: 6773143909940
effective search space used: 6773143909940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)