ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags31o23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 163 bits (82), Expect = 8e-37 Identities = 123/137 (89%) Strand = Plus / Minus Query: 444 ggcctcgaacgcctccacggggaagctgcgggacaggccgccgagggccttgcagtggag 503 ||||||||| || || ||||||||||||||||| |||||||||| |||||||||| ||| Sbjct: 23149643 ggcctcgaaggcgtcgacggggaagctgcgggagaggccgccgatggccttgcaggtgag 23149584 Query: 504 cttgccggtgggcgggtcgtcgacgcanatctcgtggaggttgacccagatgagcatctc 563 |||||||||||| |||||||||||| |||||||||||| ||||||||||||| | ||| Sbjct: 23149583 cttgccggtgggggggtcgtcgacggcgatctcgtggagggtgacccagatgaggagctc 23149524 Query: 564 cttggccttgacgccgg 580 ||||||||||||||||| Sbjct: 23149523 cttggccttgacgccgg 23149507 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 435 ggcgtcggcggcctcgaacgcctcc 459 |||||||||| |||||||||||||| Sbjct: 7112032 ggcgtcggcgtcctcgaacgcctcc 7112008
>dbj|AK109434.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G11, full insert sequence Length = 960 Score = 163 bits (82), Expect = 8e-37 Identities = 123/137 (89%) Strand = Plus / Minus Query: 444 ggcctcgaacgcctccacggggaagctgcgggacaggccgccgagggccttgcagtggag 503 ||||||||| || || ||||||||||||||||| |||||||||| |||||||||| ||| Sbjct: 510 ggcctcgaaggcgtcgacggggaagctgcgggagaggccgccgatggccttgcaggtgag 451 Query: 504 cttgccggtgggcgggtcgtcgacgcanatctcgtggaggttgacccagatgagcatctc 563 |||||||||||| |||||||||||| |||||||||||| ||||||||||||| | ||| Sbjct: 450 cttgccggtgggggggtcgtcgacggcgatctcgtggagggtgacccagatgaggagctc 391 Query: 564 cttggccttgacgccgg 580 ||||||||||||||||| Sbjct: 390 cttggccttgacgccgg 374
>dbj|AK069514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020B07, full insert sequence Length = 1046 Score = 163 bits (82), Expect = 8e-37 Identities = 123/137 (89%) Strand = Plus / Minus Query: 444 ggcctcgaacgcctccacggggaagctgcgggacaggccgccgagggccttgcagtggag 503 ||||||||| || || ||||||||||||||||| |||||||||| |||||||||| ||| Sbjct: 511 ggcctcgaaggcgtcgacggggaagctgcgggagaggccgccgatggccttgcaggtgag 452 Query: 504 cttgccggtgggcgggtcgtcgacgcanatctcgtggaggttgacccagatgagcatctc 563 |||||||||||| |||||||||||| |||||||||||| ||||||||||||| | ||| Sbjct: 451 cttgccggtgggggggtcgtcgacggcgatctcgtggagggtgacccagatgaggagctc 392 Query: 564 cttggccttgacgccgg 580 ||||||||||||||||| Sbjct: 391 cttggccttgacgccgg 375
>dbj|AK060891.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C01, full insert sequence Length = 1001 Score = 163 bits (82), Expect = 8e-37 Identities = 123/137 (89%) Strand = Plus / Minus Query: 444 ggcctcgaacgcctccacggggaagctgcgggacaggccgccgagggccttgcagtggag 503 ||||||||| || || ||||||||||||||||| |||||||||| |||||||||| ||| Sbjct: 512 ggcctcgaaggcgtcgacggggaagctgcgggagaggccgccgatggccttgcaggtgag 453 Query: 504 cttgccggtgggcgggtcgtcgacgcanatctcgtggaggttgacccagatgagcatctc 563 |||||||||||| |||||||||||| |||||||||||| ||||||||||||| | ||| Sbjct: 452 cttgccggtgggggggtcgtcgacggcgatctcgtggagggtgacccagatgaggagctc 393 Query: 564 cttggccttgacgccgg 580 ||||||||||||||||| Sbjct: 392 cttggccttgacgccgg 376
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 163 bits (82), Expect = 8e-37 Identities = 123/137 (89%) Strand = Plus / Minus Query: 444 ggcctcgaacgcctccacggggaagctgcgggacaggccgccgagggccttgcagtggag 503 ||||||||| || || ||||||||||||||||| |||||||||| |||||||||| ||| Sbjct: 23077834 ggcctcgaaggcgtcgacggggaagctgcgggagaggccgccgatggccttgcaggtgag 23077775 Query: 504 cttgccggtgggcgggtcgtcgacgcanatctcgtggaggttgacccagatgagcatctc 563 |||||||||||| |||||||||||| |||||||||||| ||||||||||||| | ||| Sbjct: 23077774 cttgccggtgggggggtcgtcgacggcgatctcgtggagggtgacccagatgaggagctc 23077715 Query: 564 cttggccttgacgccgg 580 ||||||||||||||||| Sbjct: 23077714 cttggccttgacgccgg 23077698 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 435 ggcgtcggcggcctcgaacgcctcc 459 |||||||||| |||||||||||||| Sbjct: 7111911 ggcgtcggcgtcctcgaacgcctcc 7111887
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 163 bits (82), Expect = 8e-37 Identities = 123/137 (89%) Strand = Plus / Plus Query: 444 ggcctcgaacgcctccacggggaagctgcgggacaggccgccgagggccttgcagtggag 503 ||||||||| || || ||||||||||||||||| |||||||||| |||||||||| ||| Sbjct: 28754 ggcctcgaaggcgtcgacggggaagctgcgggagaggccgccgatggccttgcaggtgag 28813 Query: 504 cttgccggtgggcgggtcgtcgacgcanatctcgtggaggttgacccagatgagcatctc 563 |||||||||||| |||||||||||| |||||||||||| ||||||||||||| | ||| Sbjct: 28814 cttgccggtgggggggtcgtcgacggcgatctcgtggagggtgacccagatgaggagctc 28873 Query: 564 cttggccttgacgccgg 580 ||||||||||||||||| Sbjct: 28874 cttggccttgacgccgg 28890
>dbj|AK105895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E12, full insert sequence Length = 1044 Score = 155 bits (78), Expect = 2e-34 Identities = 122/137 (89%) Strand = Plus / Minus Query: 444 ggcctcgaacgcctccacggggaagctgcgggacaggccgccgagggccttgcagtggag 503 ||||||||| || || ||||||||||||||||| |||||||||| |||||||||| ||| Sbjct: 505 ggcctcgaaggcgtcgacggggaagctgcgggagaggccgccgatggccttgcaggtgag 446 Query: 504 cttgccggtgggcgggtcgtcgacgcanatctcgtggaggttgacccagatgagcatctc 563 |||||||||||| | |||||||||| |||||||||||| ||||||||||||| | ||| Sbjct: 445 cttgccggtgggggtgtcgtcgacggcgatctcgtggagggtgacccagatgaggagctc 386 Query: 564 cttggccttgacgccgg 580 ||||||||||||||||| Sbjct: 385 cttggccttgacgccgg 369
>gb|AY106955.1| Zea mays PCO141660 mRNA sequence Length = 630 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 492 cttgcagtggagcttgccggtgggcgggtcgtcg 525 |||| |||||| |||||||||||||||||||||| Sbjct: 429 cttgaagtggatcttgccggtgggcgggtcgtcg 396
>ref|NM_192397.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 411 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 492 cttgcagtggagcttgccggtgggcgggtcgtcgacg 528 |||| |||||| ||||||||||||||||| ||||||| Sbjct: 354 cttgaagtggatcttgccggtgggcgggttgtcgacg 318
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 492 cttgcagtggagcttgccggtgggcgggtcgtcgacg 528 |||| |||||| ||||||||||||||||| ||||||| Sbjct: 26391875 cttgaagtggatcttgccggtgggcgggttgtcgacg 26391839 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cgatctcgtcgacggcggcg 282 |||||||||||||||||||| Sbjct: 2532390 cgatctcgtcgacggcggcg 2532409
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 492 cttgcagtggagcttgccggtgggcgggtcgtcgacg 528 |||| |||||| ||||||||||||||||| ||||||| Sbjct: 65740 cttgaagtggatcttgccggtgggcgggttgtcgacg 65704
>dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0006H05 Length = 154821 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 492 cttgcagtggagcttgccggtgggcgggtcgtcgacg 528 |||| |||||| ||||||||||||||||| ||||||| Sbjct: 494 cttgaagtggatcttgccggtgggcgggttgtcgacg 458
>gb|AC123060.4| Mus musculus chromosome 6 clone RP23-214M22, complete sequence Length = 210248 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 324 tgctgcctcctccttgagcttc 345 |||||||||||||||||||||| Sbjct: 29015 tgctgcctcctccttgagcttc 29036
>ref|XM_513260.1| PREDICTED: Pan troglodytes LOC456689 (LOC456689), mRNA Length = 3078 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 347 cagctgccccctcctccttctc 368 |||||||||||||||||||||| Sbjct: 2368 cagctgccccctcctccttctc 2347
>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence Length = 211910 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 324 tgctgcctcctccttgagcttc 345 |||||||||||||||||||||| Sbjct: 186887 tgctgcctcctccttgagcttc 186908
>gb|AC118414.9| Rattus norvegicus 3 BAC CH230-223K21 (Children's Hospital Oakland Research Institute) complete sequence Length = 217330 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 203 tggctgcaaccgcctccgcctgcacc 228 |||||||| ||||||||||||||||| Sbjct: 15271 tggctgcacccgcctccgcctgcacc 15296
>gb|DQ356948.1| Crocodilepox virus, complete genome Length = 190054 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 ccgatctcgtcgacggcggcgg 283 |||||||||||||||||||||| Sbjct: 133169 ccgatctcgtcgacggcggcgg 133148
>gb|AF296010.1| Unidentified bacterium SM-A75 RNAase P (rnpB) gene, partial sequence Length = 289 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 405 cttgaggcgtccggtgacgggc 426 |||||||||||||||||||||| Sbjct: 228 cttgaggcgtccggtgacgggc 249
>ref|XM_810707.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506303.150) partial mRNA Length = 861 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 213 cgcctccgcctgcaccgttgcc 234 |||||||||||||||||||||| Sbjct: 487 cgcctccgcctgcaccgttgcc 466
>ref|XM_813112.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506811.80) partial mRNA Length = 864 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 213 cgcctccgcctgcaccgttgcc 234 |||||||||||||||||||||| Sbjct: 487 cgcctccgcctgcaccgttgcc 466
>gb|AC091296.3| Pan troglodytes clone RP43-109G19, complete sequence Length = 185979 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 ccccttgggcttctctgctgcc 330 |||||||||||||||||||||| Sbjct: 42816 ccccttgggcttctctgctgcc 42837
>emb|AJ786317.1| Streptomyces fradiae putative neomycin biosynthetic gene cluster, strain ATCC 10745 Length = 42149 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 gacggcggcggggccgggggct 294 |||||||||||||||||||||| Sbjct: 9691 gacggcggcggggccgggggct 9670
>emb|AJ843080.1| Streptomyces fradiae neomycin biosynthetic gene cluster, strain MCIMB 8233 Length = 30837 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 gacggcggcggggccgggggct 294 |||||||||||||||||||||| Sbjct: 11001 gacggcggcggggccgggggct 11022
>emb|AL357500.17| Human DNA sequence from clone RP11-242O24 on chromosome 1 Contains the 3' end of the EPB41 gene for erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked), three novel genes, the 3' end of the SFRS4 gene for splicing factor arginine/serine-rich 4 and a CpG island, complete sequence Length = 112392 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 347 cagctgccccctcctccttctc 368 |||||||||||||||||||||| Sbjct: 32162 cagctgccccctcctccttctc 32141
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 ccgatctcgtcgacggcggcgg 283 |||||||||||||||||||||| Sbjct: 244347 ccgatctcgtcgacggcggcgg 244368
>gb|BC094230.1| Mus musculus nuclear receptor interacting protein 2, mRNA (cDNA clone MGC:106498 IMAGE:30535040), complete cds Length = 3308 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 324 tgctgcctcctccttgagcttc 345 |||||||||||||||||||||| Sbjct: 1210 tgctgcctcctccttgagcttc 1231
>dbj|AB211959.1| Streptomyces fradiae orf6, neoU, neoT, neoS, neoR, neoA, neoB, neoC, neoD, neoE, neoF, neoG, neoH, neoI, neoJ, neoK, neoL, neoM, neoN, neoO, neoP, neoQ, orf1, orf2, orf3, orf4, orf5 genes, complete and partial cds Length = 39237 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 gacggcggcggggccgggggct 294 |||||||||||||||||||||| Sbjct: 14818 gacggcggcggggccgggggct 14839
>gb|AC147354.2| Xenopus tropicalis clone CH216-29N7, complete sequence Length = 179753 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 380 cggggctctccttctctgtcttcttc 405 ||||||||||||||||||||| |||| Sbjct: 60764 cggggctctccttctctgtctgcttc 60739
>gb|AC146868.2| Xenopus tropicalis clone CH216-11K6, complete sequence Length = 190329 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 380 cggggctctccttctctgtcttcttc 405 ||||||||||||||||||||| |||| Sbjct: 98603 cggggctctccttctctgtctgcttc 98578
>gb|U28110.1|UEU28110 Unidentified eubacterium clone PS#27 ribonuclease P RNA (rnpB) gene, partial sequence Length = 342 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 405 cttgaggcgtccggtgacgggc 426 |||||||||||||||||||||| Sbjct: 268 cttgaggcgtccggtgacgggc 289
>gb|AC005015.2|AC005015 Homo sapiens BAC clone GS1-166C5 from 7q11.23-q21.1, complete sequence Length = 219935 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 309 ccccttgggcttctctgctgcc 330 |||||||||||||||||||||| Sbjct: 12835 ccccttgggcttctctgctgcc 12814
>emb|AJ629247.1| Streptomyces fradiae neomycin biosynthesis gene cluster, strain DSM 40063 Length = 50466 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 gacggcggcggggccgggggct 294 |||||||||||||||||||||| Sbjct: 19547 gacggcggcggggccgggggct 19568
>emb|AL833483.1|HSM804796 Homo sapiens mRNA; cDNA DKFZp686E1929 (from clone DKFZp686E1929) Length = 5229 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 347 cagctgccccctcctccttctc 368 |||||||||||||||||||||| Sbjct: 131 cagctgccccctcctccttctc 110
>gb|AY168440.1| Oryza sativa (indica cultivar-group) IPK (ipk) gene, complete cds Length = 5207 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 435 ggcgtcggcggcctcgaacgcctcc 459 |||||||||| |||||||||||||| Sbjct: 2086 ggcgtcggcgtcctcgaacgcctcc 2062
>gb|AF312920.1| Oryza sativa protein kinase-like protein mRNA, complete cds Length = 2138 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 435 ggcgtcggcggcctcgaacgcctcc 459 |||||||||| |||||||||||||| Sbjct: 672 ggcgtcggcgtcctcgaacgcctcc 648
>gb|AY596538.1| Saccharum officinarum clone SCCCRZ2C04A03, complete sequence Length = 1227 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 422 cgggcacgggcagggcgtcggcggc 446 ||||||||||||||||| ||||||| Sbjct: 522 cgggcacgggcagggcgccggcggc 498
>gb|AC127337.4| Mus musculus BAC clone RP23-168F21 from 12, complete sequence Length = 209066 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 gcttctctgctgcctcctcct 337 ||||||||||||||||||||| Sbjct: 68548 gcttctctgctgcctcctcct 68528
>emb|AL732509.4| Human DNA sequence from clone CTD-2245E12 on chromosome X Contains the 5' end of the PHKA2 gene for phosphorylase kinase, alpha 2 (liver), the 3' end of the GPR64 gene for G protein-coupled receptor 64 and a CpG island, complete sequence Length = 128189 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 279 ggcggggccgggggctggagcgacg 303 ||||||| ||||||||||||||||| Sbjct: 73436 ggcggggacgggggctggagcgacg 73460
>gb|AC116071.5| Rattus norvegicus 3 BAC CH230-230O7 (Children's Hospital Oakland Research Institute) complete sequence Length = 224778 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 cttctctgtcttcttcttgag 410 ||||||||||||||||||||| Sbjct: 178830 cttctctgtcttcttcttgag 178810
>dbj|AB088119.1| Streptomyces sp. TP-A0274 staurosporine biosynthetic gene cluster (staR, staB, staA, staN, staG, staO, staD, staP, staMA, staJ, staK, staI, staE, staMB), complete cds Length = 22999 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 gccgatctcgtcgacggcggc 281 ||||||||||||||||||||| Sbjct: 11282 gccgatctcgtcgacggcggc 11262
>dbj|AB071406.1| Streptomyces sp. TP-A0274 gene for chromopyrrolic acid synthase StaD, complete cds Length = 3420 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 gccgatctcgtcgacggcggc 281 ||||||||||||||||||||| Sbjct: 1397 gccgatctcgtcgacggcggc 1377
>gb|AC069307.7| Homo sapiens BAC clone RP11-738E22 from 4, complete sequence Length = 203474 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 aatgcaatgcgttattctgaa 133 ||||||||||||||||||||| Sbjct: 114989 aatgcaatgcgttattctgaa 114969
>ref|XM_215812.3| PREDICTED: Rattus norvegicus transformation related protein 53 binding protein 1 (predicted) (Trp53bp1_predicted), mRNA Length = 6045 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 cttctctgtcttcttcttgag 410 ||||||||||||||||||||| Sbjct: 3220 cttctctgtcttcttcttgag 3200
>gb|AE005066.1| Halobacterium sp. NRC-1 section 97 of 170 of the complete genome Length = 11460 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 gatctcgtcgacggcggcggggccg 288 |||||||||||| |||||||||||| Sbjct: 2866 gatctcgtcgaccgcggcggggccg 2842
>dbj|AK072981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150E22, full insert sequence Length = 2390 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 435 ggcgtcggcggcctcgaacgcctcc 459 |||||||||| |||||||||||||| Sbjct: 728 ggcgtcggcgtcctcgaacgcctcc 704
>gb|AY110901.1| Zea mays CL7341_1 mRNA sequence Length = 746 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 540 gaggttgacccagatgagcatctccttggccttgacgccgg 580 |||| ||||||||||||| | |||||||| |||||| |||| Sbjct: 355 gagggtgacccagatgaggagctccttggtcttgaccccgg 315
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 379 tcggggctctccttctctgtcttcttctt 407 ||||||||||||| |||| |||||||||| Sbjct: 1409339 tcggggctctcctcctctctcttcttctt 1409311
>emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial sequence from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 45687 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 435 ggcgtcggcggcctcgaacgcctcc 459 |||||||||| |||||||||||||| Sbjct: 20332 ggcgtcggcgtcctcgaacgcctcc 20308
>ref|XM_480517.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1011 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 tcgtcgacggcggcggggccgggg 291 ||||||||||||||| |||||||| Sbjct: 476 tcgtcgacggcggcgaggccgggg 453
>ref|XM_516278.1| PREDICTED: Pan troglodytes plasma membrane calcium ATPase 2 (LOC460168), mRNA Length = 4845 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 gcttctctgctgcctcctcc 336 |||||||||||||||||||| Sbjct: 1405 gcttctctgctgcctcctcc 1424
>ref|NM_006310.2| Homo sapiens aminopeptidase puromycin sensitive (NPEPPS), mRNA Length = 4177 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 cccctcctccttctcgtctt 373 |||||||||||||||||||| Sbjct: 130 cccctcctccttctcgtctt 149
>gb|AY729488.1| Helicosporidium sp. ex Simulium jonesii EF-1 alpha-like protein (efl) mRNA, complete cds Length = 1701 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gcctcctccttgagcttctc 347 |||||||||||||||||||| Sbjct: 182 gcctcctccttgagcttctc 163
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 329 cctcctccttgagcttctcagctg 352 ||||||||||||||||||| |||| Sbjct: 430570 cctcctccttgagcttctccgctg 430593
>gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071K19, complete sequence Length = 174752 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 gccgatctcgtcgacggcggcggg 284 ||||||||||||||||||| |||| Sbjct: 3710 gccgatctcgtcgacggcgacggg 3733
>gb|BC029299.1| Homo sapiens pleckstrin homology-like domain, family B, member 3, mRNA (cDNA clone IMAGE:5171114) Length = 778 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 gtcggggctctccttctctg 397 |||||||||||||||||||| Sbjct: 231 gtcggggctctccttctctg 212
>ref|XM_588936.2| PREDICTED: Bos taurus similar to Potassium voltage-gated channel subfamily A member 6 (Voltage-gated potassium channel subunit Kv1.6) (HBK2) (LOC539714), mRNA Length = 1869 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 tgacgggcacgggcagggcg 438 |||||||||||||||||||| Sbjct: 1366 tgacgggcacgggcagggcg 1347
>ref|NM_198850.2| Homo sapiens pleckstrin homology-like domain, family B, member 3 (PHLDB3), mRNA Length = 2287 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 gtcggggctctccttctctg 397 |||||||||||||||||||| Sbjct: 333 gtcggggctctccttctctg 314
>gb|AY049859.1| Urobatis jamaicensis 5.8S ribosomal RNA gene, and internal transcribed spacer 2, partial sequence Length = 527 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 ctccacggggaagctgcggg 475 |||||||||||||||||||| Sbjct: 183 ctccacggggaagctgcggg 164
>emb|AJ698944.1| Equus caballus csf1R gene, smf gene, tigd14 gene, slc26a2 gene, ORF1 and cGMP-alpha gene Length = 142625 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 ctccttctctgtcttcttct 406 |||||||||||||||||||| Sbjct: 105634 ctccttctctgtcttcttct 105615
>ref|XM_572818.1| Cryptococcus neoformans var. neoformans JEC21 mitochondrial ribosomal protein (CNI01480) partial mRNA Length = 768 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 cctcctccttgagcttctcagctg 352 ||||||||||||||||||| |||| Sbjct: 751 cctcctccttgagcttctccgctg 728
>gb|AC115361.5| Mus musculus BAC clone RP24-76P12 from chromosome 8, complete sequence Length = 235095 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 tctccttctctgtcttcttc 405 |||||||||||||||||||| Sbjct: 224223 tctccttctctgtcttcttc 224204
>gb|AC124367.4| Mus musculus BAC clone RP24-545D20 from chromosome 18, complete sequence Length = 169912 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 tccttctctgtcttcttctt 407 |||||||||||||||||||| Sbjct: 81207 tccttctctgtcttcttctt 81188
>emb|Z68751.1|CET05E11 Caenorhabditis elegans Cosmid T05E11, complete sequence Length = 24554 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 tctgctgcctcctccttgag 341 |||||||||||||||||||| Sbjct: 17897 tctgctgcctcctccttgag 17878
>gb|AC124720.3| Mus musculus BAC clone RP23-387F14 from chromosome 5, complete sequence Length = 193210 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 ccttctctgtcttcttcttg 408 |||||||||||||||||||| Sbjct: 67846 ccttctctgtcttcttcttg 67827
>gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence Length = 177066 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 ggccttgcagtggagcttgc 508 |||||||||||||||||||| Sbjct: 68497 ggccttgcagtggagcttgc 68478
>gb|AC124108.15| Mus musculus chromosome 1, clone RP24-340N18, complete sequence Length = 178775 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 383 ggctctccttctctgtcttcttcttgag 410 |||||||| ||||||| ||||||||||| Sbjct: 121666 ggctctccctctctgttttcttcttgag 121693
>gb|AC102934.11| Mus musculus chromosome 3, clone RP24-209C11, complete sequence Length = 172970 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 atggttgatgacatgctaatgcaa 119 ||||||||||||||| |||||||| Sbjct: 35505 atggttgatgacatgttaatgcaa 35482
>gb|AC107781.9| Mus musculus, clone RP23-56O1, complete sequence Length = 174437 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tctccttctctgtcttcttcttga 409 ||||||||||||| |||||||||| Sbjct: 123678 tctccttctctgttttcttcttga 123655
>emb|AL512598.11| Human DNA sequence from clone RP11-165A20 on chromosome 10 Contains the 5' end of the gene for HHGP protein (HHGP) (FLJ11888), the gene for a novel protein similar to secreted frizzled-related protein 4 SFRP4 (FLJ37702), the gene for a novel protein similar to threonine synthase, containing FLJ2202 and FLJ37043 and two CpG islands, complete sequence Length = 139491 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ggcggcggggccgggggctg 295 |||||||||||||||||||| Sbjct: 12251 ggcggcggggccgggggctg 12232
>ref|XM_501769.1| Yarrowia lipolytica CLIB122, YALI0C12617g predicted mRNA Length = 1152 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 cctcctccttgagcttctca 348 |||||||||||||||||||| Sbjct: 289 cctcctccttgagcttctca 270
>emb|AL139338.21| Human DNA sequence from clone RP11-149I8 on chromosome 10p12.31-14 Contains the 5' end of the gene for a novel protein (LOC221061) and a CpG island, complete sequence Length = 112261 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 cggcggcggggccgggggct 294 |||||||||||||||||||| Sbjct: 24222 cggcggcggggccgggggct 24203
>gb|AC087442.13| Homo sapiens chromosome 11, clone RP11-495O11, complete sequence Length = 200269 Score = 40.1 bits (20), Expect = 7.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 548 cccagatgagcatctccttggccttgac 575 |||||||| ||||||||||||||||||| Sbjct: 24169 cccagatg-gcatctccttggccttgac 24195
>gb|AC133680.2| Homo sapiens 3 BAC RP11-102C20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 130370 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gcggcggggccgggggctgg 296 |||||||||||||||||||| Sbjct: 91432 gcggcggggccgggggctgg 91451
>gb|BT009376.1| Triticum aestivum clone wlm96.pk030.e11:fis, full insert mRNA sequence Length = 1588 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 gatctcgtcgacggcggcgg 283 |||||||||||||||||||| Sbjct: 876 gatctcgtcgacggcggcgg 857
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 gccgatctcgtcgacggcggcggg 284 ||||||||||||||||||| |||| Sbjct: 238652 gccgatctcgtcgacggcgacggg 238675
>gb|BC070094.1| Homo sapiens pleckstrin homology-like domain, family B, member 3, mRNA (cDNA clone MGC:87511 IMAGE:4374205), complete cds Length = 2287 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 gtcggggctctccttctctg 397 |||||||||||||||||||| Sbjct: 333 gtcggggctctccttctctg 314
>gb|BC067792.1| Homo sapiens hypothetical protein FLJ11822, mRNA (cDNA clone IMAGE:5302832), containing frame-shift errors Length = 1588 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 cccctcctccttctcgtctt 373 |||||||||||||||||||| Sbjct: 86 cccctcctccttctcgtctt 105
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 cgggcacgggcagggcgtcg 441 |||||||||||||||||||| Sbjct: 126633 cgggcacgggcagggcgtcg 126614
>emb|AL162757.2|NMA6Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 6/7 Length = 326301 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 cctccgcctgcaccgttgcc 234 |||||||||||||||||||| Sbjct: 216901 cctccgcctgcaccgttgcc 216882
>gb|AC103855.3| Homo sapiens chromosome 11, clone RP11-958J22, complete sequence Length = 183720 Score = 40.1 bits (20), Expect = 7.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 548 cccagatgagcatctccttggccttgac 575 |||||||| ||||||||||||||||||| Sbjct: 171058 cccagatg-gcatctccttggccttgac 171084
>dbj|AK097512.1| Homo sapiens cDNA FLJ40193 fis, clone TESTI2019430 Length = 1978 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 gtcggggctctccttctctg 397 |||||||||||||||||||| Sbjct: 41 gtcggggctctccttctctg 22
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 cagggcgtcggcggcctcga 451 |||||||||||||||||||| Sbjct: 3729475 cagggcgtcggcggcctcga 3729456
>gb|AE005877.1| Caulobacter crescentus CB15 section 203 of 359 of the complete genome Length = 12778 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 gcagggcgtcggcggcctcg 450 |||||||||||||||||||| Sbjct: 3232 gcagggcgtcggcggcctcg 3251
>gb|AE005694.1| Caulobacter crescentus CB15 section 20 of 359 of the complete genome Length = 14034 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 gcagggcgtcggcggcctcg 450 |||||||||||||||||||| Sbjct: 233 gcagggcgtcggcggcctcg 252
>dbj|AK095877.1| Homo sapiens cDNA FLJ38558 fis, clone HCHON2003327, highly similar to PUROMYCIN-SENSITIVE AMINOPEPTIDASE (EC 3.4.11.-) Length = 2241 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 cccctcctccttctcgtctt 373 |||||||||||||||||||| Sbjct: 95 cccctcctccttctcgtctt 114
>ref|NM_135440.1| Drosophila melanogaster CG4450-RA (CG4450), mRNA Length = 2158 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 tgacgggcacgggcagggcg 438 |||||||||||||||||||| Sbjct: 1520 tgacgggcacgggcagggcg 1501
>gb|AC099400.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096E22, complete sequence Length = 133846 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 gccgatctcgtcgacggcggcggg 284 ||||||||||||||||||| |||| Sbjct: 88315 gccgatctcgtcgacggcgacggg 88338
>gb|AC025682.6| Homo sapiens chromosome 17, clone RP11-580I16, complete sequence Length = 158135 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cccctcctccttctcgtctt 373 |||||||||||||||||||| Sbjct: 125406 cccctcctccttctcgtctt 125387
>dbj|AK137734.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930125L22 product:CDC2-related kinase 7, full insert sequence Length = 3557 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cttctctgctgcctcctcct 337 |||||||||||||||||||| Sbjct: 1686 cttctctgctgcctcctcct 1667
>gb|AC105900.2| Homo sapiens chromosome 3 clone RP11-30P17, complete sequence Length = 148377 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gcggcggggccgggggctgg 296 |||||||||||||||||||| Sbjct: 137364 gcggcggggccgggggctgg 137345
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cgatctcgtcgacggcggcg 282 |||||||||||||||||||| Sbjct: 1595876 cgatctcgtcgacggcggcg 1595895
>gb|AC092492.1|AC092492 Drosophila melanogaster, chromosome 2L, region 30B-30E, BAC clone BACR20B09, complete sequence Length = 177997 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 tgacgggcacgggcagggcg 438 |||||||||||||||||||| Sbjct: 159612 tgacgggcacgggcagggcg 159631
>ref|NM_069679.2| Caenorhabditis elegans T05E11.3 (T05E11.3) mRNA, complete cds Length = 2589 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 tctgctgcctcctccttgag 341 |||||||||||||||||||| Sbjct: 824 tctgctgcctcctccttgag 805
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 cctccgcctgcaccgttgcc 234 |||||||||||||||||||| Sbjct: 1763613 cctccgcctgcaccgttgcc 1763594
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 gccgatctcgtcgacggcggcggg 284 ||||||||||||||||||| |||| Sbjct: 238652 gccgatctcgtcgacggcgacggg 238675
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 tcgtcgacggcggcggggccgggg 291 ||||||||||||||| |||||||| Sbjct: 5552985 tcgtcgacggcggcgaggccgggg 5552962
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 gccgatctcgtcgacggcggcggg 284 ||||||||||||||||||| |||| Sbjct: 8271712 gccgatctcgtcgacggcgacggg 8271689
>gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR07D23, complete sequence Length = 176610 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 tgacgggcacgggcagggcg 438 |||||||||||||||||||| Sbjct: 2481 tgacgggcacgggcagggcg 2500
>gb|AC021317.19| Homo sapiens chromosome 17, clone RP11-678G7, complete sequence Length = 180876 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 cccctcctccttctcgtctt 373 |||||||||||||||||||| Sbjct: 43188 cccctcctccttctcgtctt 43207
>gb|AC062032.5| Homo sapiens BAC clone RP11-515K12 from 2, complete sequence Length = 182147 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 ggttgacccagatgagcatc 561 |||||||||||||||||||| Sbjct: 148770 ggttgacccagatgagcatc 148751
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416D03 Length = 157112 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cgatctcgtcgacggcggcg 282 |||||||||||||||||||| Sbjct: 86811 cgatctcgtcgacggcggcg 86830
>gb|AC105328.13| Homo sapiens chromosome 8, clone RP11-932B15, complete sequence Length = 128785 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 351 tgccccctcctccttctcgtctttctgg 378 |||||||||||||||||| ||| ||||| Sbjct: 35776 tgccccctcctccttctcttctctctgg 35803
>gb|AC115992.13| Homo sapiens chromosome 17, clone CTD-2022O14, complete sequence Length = 139475 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cccctcctccttctcgtctt 373 |||||||||||||||||||| Sbjct: 29105 cccctcctccttctcgtctt 29086
>gb|AC018758.2|AC018758 Homo sapiens chromosome 19, BAC CTB-61I7 (BC52850), complete sequence Length = 185409 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 gtcggggctctccttctctg 397 |||||||||||||||||||| Sbjct: 136516 gtcggggctctccttctctg 136535
>gb|AF252387.1|AF252387 Homo sapiens puromycin-sensitive aminopeptidase (NPEPPS) gene, promoter, exon 1 and partial cds Length = 650 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 cccctcctccttctcgtctt 373 |||||||||||||||||||| Sbjct: 407 cccctcctccttctcgtctt 426
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 cggcctcgaacgcctccacg 462 |||||||||||||||||||| Sbjct: 3261758 cggcctcgaacgcctccacg 3261777
>gb|AF056943.1|AF056943 Oryctolagus cuniculus potassium channel Kv1.5 mRNA, complete cds Length = 1872 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 tgacgggcacgggcagggcg 438 |||||||||||||||||||| Sbjct: 1516 tgacgggcacgggcagggcg 1497
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 cgtcgacggcggcggggccg 288 |||||||||||||||||||| Sbjct: 1994928 cgtcgacggcggcggggccg 1994947
>dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0003K21 Length = 158810 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 gccgatctcgtcgacggcggcggg 284 ||||||||||||||||||| |||| Sbjct: 154735 gccgatctcgtcgacggcgacggg 154712
>dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0639B07 Length = 138780 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 gccgatctcgtcgacggcggcggg 284 ||||||||||||||||||| |||| Sbjct: 66824 gccgatctcgtcgacggcgacggg 66801
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0412D08 Length = 150188 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 tcgtcgacggcggcggggccgggg 291 ||||||||||||||| |||||||| Sbjct: 8361 tcgtcgacggcggcgaggccgggg 8338
>dbj|AK129237.1| Mus musculus mRNA for mKIAA0904 protein Length = 4608 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cttctctgctgcctcctcct 337 |||||||||||||||||||| Sbjct: 2955 cttctctgctgcctcctcct 2936
>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0035F08 Length = 167446 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 tcgtcgacggcggcggggccgggg 291 ||||||||||||||| |||||||| Sbjct: 79213 tcgtcgacggcggcgaggccgggg 79190
>ref|XM_317267.2| Anopheles gambiae str. PEST ENSANGP00000021912 (ENSANGG00000019423), partial mRNA Length = 1341 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 tgacgggcacgggcagggcg 438 |||||||||||||||||||| Sbjct: 1063 tgacgggcacgggcagggcg 1044
>emb|AJ323212.1|HSA323212 Homo sapiens genomic sequence surrounding NotI site, clone NB1-078R Length = 472 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ggcggcggggccgggggctg 295 |||||||||||||||||||| Sbjct: 64 ggcggcggggccgggggctg 45
>emb|AJ132583.1|HSA132583 Homo sapiens mRNA for puromycin sensitive aminopeptidase, partial Length = 4071 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 cccctcctccttctcgtctt 373 |||||||||||||||||||| Sbjct: 20 cccctcctccttctcgtctt 39
>gb|AC008000.7|AC008000 Homo sapiens 3q25-26 BAC CITB-371O18 (California Institute of Technology BAC Library) complete sequence Length = 131105 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 gcttctctgctgcctcctcc 336 |||||||||||||||||||| Sbjct: 119076 gcttctctgctgcctcctcc 119095
>gb|AE003624.3| Drosophila melanogaster chromosome 2L, section 33 of 83 of the complete sequence Length = 270771 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 tgacgggcacgggcagggcg 438 |||||||||||||||||||| Sbjct: 213387 tgacgggcacgggcagggcg 213406
>gb|AC005839.1|AC005839 Homo sapiens chromosome 17, clone hRPK.481_C_4, complete sequence Length = 128328 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ttattctgaaacaaatttat 143 |||||||||||||||||||| Sbjct: 113602 ttattctgaaacaaatttat 113621
>dbj|D45025.1|RABPCA Oryctolagus cuniculus mRNA for potassium channel, complete cds Length = 1866 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 tgacgggcacgggcagggcg 438 |||||||||||||||||||| Sbjct: 1511 tgacgggcacgggcagggcg 1492
>gb|BC057057.1| Mus musculus Cdc2-related kinase, arginine/serine-rich, mRNA (cDNA clone IMAGE:6826281) Length = 2623 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cttctctgctgcctcctcct 337 |||||||||||||||||||| Sbjct: 763 cttctctgctgcctcctcct 744
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 cgatctcgtcgacggcggcg 282 |||||||||||||||||||| Sbjct: 1047631 cgatctcgtcgacggcggcg 1047612
>dbj|AP003473.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1935H12 Length = 148498 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 351 tgccccctcctccttctcgtctttctgg 378 |||||||||||||||||| ||| ||||| Sbjct: 120739 tgccccctcctccttctcttctctctgg 120712
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 gccgatctcgtcgacggcggcggg 284 ||||||||||||||||||| |||| Sbjct: 238650 gccgatctcgtcgacggcgacggg 238673
>dbj|AP003158.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-662M24, complete sequences Length = 194260 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ttcatctccttcattttctg 260 |||||||||||||||||||| Sbjct: 139731 ttcatctccttcattttctg 139712
>dbj|AP003156.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-56O15, complete sequences Length = 162128 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ttcatctccttcattttctg 260 |||||||||||||||||||| Sbjct: 3770 ttcatctccttcattttctg 3751
>gb|AC154286.1| Mus musculus BAC clone RP24-476G22 from 17, complete sequence Length = 181094 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tctgaaacaaatttatgact 147 |||||||||||||||||||| Sbjct: 107615 tctgaaacaaatttatgact 107634
>gb|AC126445.5| Mus musculus BAC clone RP23-307P24 from 8, complete sequence Length = 167770 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tctccttctctgtcttcttc 405 |||||||||||||||||||| Sbjct: 158102 tctccttctctgtcttcttc 158121
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 cctcctccttgagcttctca 348 |||||||||||||||||||| Sbjct: 1758763 cctcctccttgagcttctca 1758782
>gb|U49855.1|HSRARB1S1 Human retinoic acid receptor beta 1 (RARbeta1) gene, 5' region and exon 1 Length = 682 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gcggcggggccgggggctgg 296 |||||||||||||||||||| Sbjct: 438 gcggcggggccgggggctgg 457
>gb|AC158363.2| Mus musculus BAC clone RP23-214J3 from chromosome 15, complete sequence Length = 228138 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tctccttctctgtcttcttc 405 |||||||||||||||||||| Sbjct: 113768 tctccttctctgtcttcttc 113787
>gb|AC171211.1| Mus musculus BAC clone RP23-34I14 from chromosome 16, complete sequence Length = 230462 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ttcatctccttcattttctg 260 |||||||||||||||||||| Sbjct: 130687 ttcatctccttcattttctg 130668
>dbj|AP005356.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1198A4, complete sequence Length = 159758 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 351 tgccccctcctccttctcgtctttctgg 378 |||||||||||||||||| ||| ||||| Sbjct: 71410 tgccccctcctccttctcttctctctgg 71383
>emb|AL935175.6| Mouse DNA sequence from clone RP23-397E13 on chromosome 2, complete sequence Length = 158592 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 tccttctctgtcttcttctt 407 |||||||||||||||||||| Sbjct: 108240 tccttctctgtcttcttctt 108221
>emb|Y07701.1|HSAMINPEP H.sapiens mRNA for aminopeptidase Length = 3747 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 cccctcctccttctcgtctt 373 |||||||||||||||||||| Sbjct: 339 cccctcctccttctcgtctt 358
>gb|AC090841.2| Homo sapiens chromosome 3 clone RP11-1082A18 map 3p, complete sequence Length = 217778 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gcttctctgctgcctcctcc 336 |||||||||||||||||||| Sbjct: 97624 gcttctctgctgcctcctcc 97605
>dbj|AB020711.2| Homo sapiens mRNA for KIAA0904 protein, partial cds Length = 5896 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cttctctgctgcctcctcct 337 |||||||||||||||||||| Sbjct: 4076 cttctctgctgcctcctcct 4057 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,345,405 Number of Sequences: 3902068 Number of extensions: 5345405 Number of successful extensions: 127612 Number of sequences better than 10.0: 137 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 125856 Number of HSP's gapped (non-prelim): 1758 length of query: 581 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 558 effective length of database: 17,143,297,704 effective search space: 9565960118832 effective search space used: 9565960118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
