| Clone Name | rbaal2b16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SRCA_MOUSE (Q7TQ48) Sarcalumenin precursor | 30 | 4.6 | 2 | NODI1_RHIME (O52618) Nod factor export ATP-binding protein I (No... | 30 | 6.0 |
|---|
>SRCA_MOUSE (Q7TQ48) Sarcalumenin precursor| Length = 910 Score = 30.0 bits (66), Expect = 4.6 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +3 Query: 399 APGANGLRLHYHGAATLTVLDQAPHGAXASANSRYPAWRRHLSHEGXKPSS 551 APG L LHY L+Q P GA ++AN + LS+ S+ Sbjct: 60 APGDKNLLLHYPDGREAESLEQTPAGAPSTANGQGSETEASLSNTSAAESA 110
>NODI1_RHIME (O52618) Nod factor export ATP-binding protein I (Nodulation| ATP-binding protein I) Length = 355 Score = 29.6 bits (65), Expect = 6.0 Identities = 19/68 (27%), Positives = 31/68 (45%) Frame = +3 Query: 297 DWLAWSMAASPSLYTGXSPTLAVQLASIL**WGEAPGANGLRLHYHGAATLTVLDQAPHG 476 +W + A + G PT+A+ +AS+ +G+ P NGL +L P+G Sbjct: 35 EWKDQTGLAVKTAIPGAKPTVAIDVASVTKSYGDKPVINGLSFTVAAGECFGLL--GPNG 92 Query: 477 AXASANSR 500 A S +R Sbjct: 93 AGKSTITR 100 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,176,723 Number of Sequences: 219361 Number of extensions: 1114336 Number of successful extensions: 2889 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2818 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2884 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)