ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags31o19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483184.1| Oryza sativa (japonica cultivar-group), mRNA 381 e-102
2ref|XM_483185.1| Oryza sativa (japonica cultivar-group), mRNA 381 e-102
3dbj|AK065120.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102
4dbj|AK064832.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102
5gb|AY772416.1| Oryza sativa (japonica cultivar-group) peroxisoma... 373 e-100
6gb|AY772415.1| Oryza sativa (japonica cultivar-group) peroxisoma... 373 e-100
7gb|BT018851.1| Zea mays clone EL01N0555H04.d mRNA sequence 325 1e-85
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
9dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
10gb|AF056282.1|AF056282 Nicotiana tabacum clone 165 peroxisomal t... 121 3e-24
11gb|AY111328.1| Zea mays CL29436_1 mRNA sequence 115 2e-22
12gb|AF056283.1|AF056283 Nicotiana tabacum clone 354 peroxisomal t... 105 2e-19
13gb|AF053104.1|AF053104 Nicotiana tabacum peroxisomal targeting s... 105 2e-19
14gb|AF068690.1|AF068690 Citrullus lanatus peroxisomal targeting s... 103 7e-19
15ref|NM_125012.3| Arabidopsis thaliana PEX5; peroxisome targeting... 68 4e-08
16gb|AY096679.1| Arabidopsis thaliana putative peroxisomal targeti... 68 4e-08
17gb|AY056299.1| Arabidopsis thaliana putative peroxisomal targeti... 68 4e-08
18gb|AF074843.1|AF074843 Arabidopsis thaliana peroxisomal targetin... 68 4e-08
19gb|DQ288941.1| Brassica napus peroxisomal import receptor PTS1 m... 68 4e-08
20gb|AC147959.18| Medicago truncatula clone mth2-11c16, complete s... 56 2e-04
21dbj|AB009049.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 56 2e-04
22gb|AC093870.3| Homo sapiens BAC clone RP11-598G2 from 4, complet... 50 0.010
23emb|BX833122.1|CNS09ZA3 Arabidopsis thaliana Full-length cDNA Co... 46 0.15
24gb|AC141879.5| Mus musculus BAC clone RP24-249I4 from chromosome... 42 2.3
25emb|CR788244.9| Zebrafish DNA sequence from clone DKEY-254A16 in... 42 2.3
26gb|AC156994.8| Mus musculus chromosome 5, clone RP23-312N12, com... 42 2.3
27emb|BX908749.6| Zebrafish DNA sequence from clone DKEY-247F18 in... 42 2.3
28ref|NM_062819.2| Caenorhabditis elegans Fem-3 mRNA Binding Facto... 42 2.3
29dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
30gb|AC092155.3| Homo sapiens BAC clone RP11-312H10 from 2, comple... 42 2.3
31gb|U23176.2| Caenorhabditis elegans cosmid F21H12, complete sequ... 42 2.3
32dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
33dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
34gb|AC018365.49| Mus musculus strain 129/SvJ clone mgs1-461b11 ma... 42 2.3
35emb|CR933785.11| Zebrafish DNA sequence from clone CH211-57C18 i... 42 2.3
36gb|AC125079.3| Mus musculus chromosome 16 clone RP23-480M17, com... 40 9.2
37gb|AC147344.2| Pan troglodytes BAC clone CH251-4O16 from Y, comp... 40 9.2
38gb|AC141329.4| Mus musculus BAC clone RP23-63G7 from chromosome ... 40 9.2
39gb|AC122517.2| Mus musculus BAC clone RP24-459G24 from chromosom... 40 9.2
40gb|AC146206.3| Pan troglodytes BAC clone CH251-395K13 from Y, co... 40 9.2
41ref|XM_847882.1| PREDICTED: Canis familiaris similar to Actin-bi... 40 9.2
42ref|XM_673223.1| Plasmodium berghei strain ANKA guanylyl cyclase... 40 9.2
43gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Ho... 40 9.2
44emb|AL732586.6| Human DNA sequence from clone RP11-549H3 on chro... 40 9.2
45gb|AC163354.3| Mus musculus BAC clone RP23-49E21 from chromosome... 40 9.2
46gb|AC104796.4| Homo sapiens BAC clone RP11-318E19 from 4, comple... 40 9.2
47dbj|BS000553.1| Pan troglodytes chromosome Y clone:PTB-310C12, c... 40 9.2
48gb|AC078784.24| Homo sapiens 3 BAC RP11-63L4 (Roswell Park Cance... 40 9.2
49gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 9.2
50dbj|AK154777.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 9.2
51gb|AC152502.5| Mus musculus BAC clone RP23-415D12 from chromosom... 40 9.2
52dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
53gb|AY913763.1| Pan troglodytes ZFY (ZFY) gene, complete cds 40 9.2
54gb|AC084321.37| Mus musculus strain C57BL/6J chromosome 7 clone ... 40 9.2
55dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
56gb|AC153862.8| Mus musculus 10 BAC RP23-353K11 (Roswell Park Can... 40 9.2 
>ref|XM_483184.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2693

 Score =  381 bits (192), Expect = e-102
 Identities = 315/356 (88%)
 Strand = Plus / Minus

                                                                        
Query: 294  aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 353
            |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 2328 aatgcctagaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 2269

                                                                        
Query: 354  gaatcacatgcagcaatcatatcactgcgtgaagcattaccaagtgaaattctcaagtac 413
            |||||||||||||| ||||| |||   |||||||| |||| ||| ||||| | |||||||
Sbjct: 2268 gaatcacatgcagcgatcatgtcagctcgtgaagcgttactaagagaaatccgcaagtac 2209

                                                                        
Query: 414  tgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccgaatggaa 473
            |||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||||| || 
Sbjct: 2208 tgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcgaatagag 2149

                                                                        
Query: 474  tcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacggacgtag 533
            ||||| ||||  |||||||||||||||||||| |||||||||||||||||||| || || 
Sbjct: 2148 tcttcatacaatccctggttggcatagctaatccccatattagcccatgcacgcacataa 2089

                                                                        
Query: 534  ttgggcttcaaatctagagcctgctggtatgccagtacggcatcagcactctggatgctg 593
            |||||||| || || |||||||| || || |||| ||  |||||||||||||||||||||
Sbjct: 2088 ttgggctttaagtccagagcctgttgataggccaatattgcatcagcactctggatgctg 2029

                                                                    
Query: 594  tttgcttgggtcgcaccgagcttgttccaaagagaatagtcttgtggtttcagctg 649
            ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 2028 tttgcttgggtcgcacctagcttattccagagagaatagtcttgtggtttcagctg 1973
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>ref|XM_483185.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2526

 Score =  381 bits (192), Expect = e-102
 Identities = 315/356 (88%)
 Strand = Plus / Minus

                                                                        
Query: 294  aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 353
            |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 2161 aatgcctagaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 2102

                                                                        
Query: 354  gaatcacatgcagcaatcatatcactgcgtgaagcattaccaagtgaaattctcaagtac 413
            |||||||||||||| ||||| |||   |||||||| |||| ||| ||||| | |||||||
Sbjct: 2101 gaatcacatgcagcgatcatgtcagctcgtgaagcgttactaagagaaatccgcaagtac 2042

                                                                        
Query: 414  tgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccgaatggaa 473
            |||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||||| || 
Sbjct: 2041 tgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcgaatagag 1982

                                                                        
Query: 474  tcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacggacgtag 533
            ||||| ||||  |||||||||||||||||||| |||||||||||||||||||| || || 
Sbjct: 1981 tcttcatacaatccctggttggcatagctaatccccatattagcccatgcacgcacataa 1922

                                                                        
Query: 534  ttgggcttcaaatctagagcctgctggtatgccagtacggcatcagcactctggatgctg 593
            |||||||| || || |||||||| || || |||| ||  |||||||||||||||||||||
Sbjct: 1921 ttgggctttaagtccagagcctgttgataggccaatattgcatcagcactctggatgctg 1862

                                                                    
Query: 594  tttgcttgggtcgcaccgagcttgttccaaagagaatagtcttgtggtttcagctg 649
            ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 1861 tttgcttgggtcgcacctagcttattccagagagaatagtcttgtggtttcagctg 1806
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>dbj|AK065120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O15, full
            insert sequence
          Length = 2693

 Score =  381 bits (192), Expect = e-102
 Identities = 315/356 (88%)
 Strand = Plus / Minus

                                                                        
Query: 294  aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 353
            |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 2328 aatgcctagaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 2269

                                                                        
Query: 354  gaatcacatgcagcaatcatatcactgcgtgaagcattaccaagtgaaattctcaagtac 413
            |||||||||||||| ||||| |||   |||||||| |||| ||| ||||| | |||||||
Sbjct: 2268 gaatcacatgcagcgatcatgtcagctcgtgaagcgttactaagagaaatccgcaagtac 2209

                                                                        
Query: 414  tgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccgaatggaa 473
            |||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||||| || 
Sbjct: 2208 tgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcgaatagag 2149

                                                                        
Query: 474  tcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacggacgtag 533
            ||||| ||||  |||||||||||||||||||| |||||||||||||||||||| || || 
Sbjct: 2148 tcttcatacaatccctggttggcatagctaatccccatattagcccatgcacgcacataa 2089

                                                                        
Query: 534  ttgggcttcaaatctagagcctgctggtatgccagtacggcatcagcactctggatgctg 593
            |||||||| || || |||||||| || || |||| ||  |||||||||||||||||||||
Sbjct: 2088 ttgggctttaagtccagagcctgttgataggccaatattgcatcagcactctggatgctg 2029

                                                                    
Query: 594  tttgcttgggtcgcaccgagcttgttccaaagagaatagtcttgtggtttcagctg 649
            ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 2028 tttgcttgggtcgcacctagcttattccagagagaatagtcttgtggtttcagctg 1973
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>dbj|AK064832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F17, full
            insert sequence
          Length = 2526

 Score =  381 bits (192), Expect = e-102
 Identities = 315/356 (88%)
 Strand = Plus / Minus

                                                                        
Query: 294  aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 353
            |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 2161 aatgcctagaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 2102

                                                                        
Query: 354  gaatcacatgcagcaatcatatcactgcgtgaagcattaccaagtgaaattctcaagtac 413
            |||||||||||||| ||||| |||   |||||||| |||| ||| ||||| | |||||||
Sbjct: 2101 gaatcacatgcagcgatcatgtcagctcgtgaagcgttactaagagaaatccgcaagtac 2042

                                                                        
Query: 414  tgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccgaatggaa 473
            |||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||||| || 
Sbjct: 2041 tgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcgaatagag 1982

                                                                        
Query: 474  tcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacggacgtag 533
            ||||| ||||  |||||||||||||||||||| |||||||||||||||||||| || || 
Sbjct: 1981 tcttcatacaatccctggttggcatagctaatccccatattagcccatgcacgcacataa 1922

                                                                        
Query: 534  ttgggcttcaaatctagagcctgctggtatgccagtacggcatcagcactctggatgctg 593
            |||||||| || || |||||||| || || |||| ||  |||||||||||||||||||||
Sbjct: 1921 ttgggctttaagtccagagcctgttgataggccaatattgcatcagcactctggatgctg 1862

                                                                    
Query: 594  tttgcttgggtcgcaccgagcttgttccaaagagaatagtcttgtggtttcagctg 649
            ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 1861 tttgcttgggtcgcacctagcttattccagagagaatagtcttgtggtttcagctg 1806
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>gb|AY772416.1| Oryza sativa (japonica cultivar-group) peroxisomal targeting signal 1
            receptor short form (PEX5) mRNA, complete cds,
            alternatively spliced
          Length = 2527

 Score =  373 bits (188), Expect = e-100
 Identities = 314/356 (88%)
 Strand = Plus / Minus

                                                                        
Query: 294  aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 353
            |||| ||| |||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 2143 aatgcctaaaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 2084

                                                                        
Query: 354  gaatcacatgcagcaatcatatcactgcgtgaagcattaccaagtgaaattctcaagtac 413
            |||||||||||||| ||||| |||   |||||||| |||| ||| ||||| | |||||||
Sbjct: 2083 gaatcacatgcagcgatcatgtcagctcgtgaagcgttactaagagaaatccgcaagtac 2024

                                                                        
Query: 414  tgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccgaatggaa 473
            |||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||||| || 
Sbjct: 2023 tgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcgaatagag 1964

                                                                        
Query: 474  tcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacggacgtag 533
            ||||| ||||  |||||||||||||||||||| |||||||||||||||||||| || || 
Sbjct: 1963 tcttcatacaatccctggttggcatagctaatccccatattagcccatgcacgcacataa 1904

                                                                        
Query: 534  ttgggcttcaaatctagagcctgctggtatgccagtacggcatcagcactctggatgctg 593
            |||||||| || || |||||||| || || |||| ||  |||||||||||||||||||||
Sbjct: 1903 ttgggctttaagtccagagcctgttgataggccaatattgcatcagcactctggatgctg 1844

                                                                    
Query: 594  tttgcttgggtcgcaccgagcttgttccaaagagaatagtcttgtggtttcagctg 649
            ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 1843 tttgcttgggtcgcacctagcttattccagagagaatagtcttgtggtttcagctg 1788
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>gb|AY772415.1| Oryza sativa (japonica cultivar-group) peroxisomal targeting signal 1
            receptor long form (PEX5) mRNA, complete cds,
            alternatively spliced
          Length = 2698

 Score =  373 bits (188), Expect = e-100
 Identities = 314/356 (88%)
 Strand = Plus / Minus

                                                                        
Query: 294  aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 353
            |||| ||| |||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 2314 aatgcctaaaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 2255

                                                                        
Query: 354  gaatcacatgcagcaatcatatcactgcgtgaagcattaccaagtgaaattctcaagtac 413
            |||||||||||||| ||||| |||   |||||||| |||| ||| ||||| | |||||||
Sbjct: 2254 gaatcacatgcagcgatcatgtcagctcgtgaagcgttactaagagaaatccgcaagtac 2195

                                                                        
Query: 414  tgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccgaatggaa 473
            |||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||||| || 
Sbjct: 2194 tgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcgaatagag 2135

                                                                        
Query: 474  tcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacggacgtag 533
            ||||| ||||  |||||||||||||||||||| |||||||||||||||||||| || || 
Sbjct: 2134 tcttcatacaatccctggttggcatagctaatccccatattagcccatgcacgcacataa 2075

                                                                        
Query: 534  ttgggcttcaaatctagagcctgctggtatgccagtacggcatcagcactctggatgctg 593
            |||||||| || || |||||||| || || |||| ||  |||||||||||||||||||||
Sbjct: 2074 ttgggctttaagtccagagcctgttgataggccaatattgcatcagcactctggatgctg 2015

                                                                    
Query: 594  tttgcttgggtcgcaccgagcttgttccaaagagaatagtcttgtggtttcagctg 649
            ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 2014 tttgcttgggtcgcacctagcttattccagagagaatagtcttgtggtttcagctg 1959
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>gb|BT018851.1| Zea mays clone EL01N0555H04.d mRNA sequence
          Length = 2135

 Score =  325 bits (164), Expect = 1e-85
 Identities = 311/360 (86%)
 Strand = Plus / Minus

                                                                        
Query: 310  ggactcagaggggaaactctttctgaaggacgtcaaggttgcgggaatcacatgcagcaa 369
            |||||||||| |||||||||||||||||  |||| ||||||||||  || ||||| ||||
Sbjct: 1805 ggactcagagaggaaactctttctgaagagcgtcgaggttgcgggcgtcgcatgcggcaa 1746

                                                                        
Query: 370  tcatatcactgcgtgaagcattaccaagtgaaattctcaagtactgccaggcattgtctg 429
            |||| |||   | |||||| || ||||| ||||| |||||||||||||| || ||||| |
Sbjct: 1745 tcatgtcagctcttgaagcgttgccaagagaaatcctcaagtactgccaagcgttgtcag 1686

                                                                        
Query: 430  ctttcggattcatggaaaccgcccttacatagtaccgaatggaatcttcgtacagaccct 489
            |||| || ||||| | ||| |||||||||||||| ||||||||||| || ||||||||||
Sbjct: 1685 cttttgggttcattgtaactgcccttacatagtatcgaatggaatcctcatacagaccct 1626

                                                                        
Query: 490  ggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaatcta 549
            ||||||||||||| |||||||| || ||||||||||| ||||||||||| ||||| ||||
Sbjct: 1625 ggttggcatagctgattcccatgttcgcccatgcacgcacgtagttgggtttcaagtcta 1566

                                                                        
Query: 550  gagcctgctggtatgccagtacggcatcagcactctggatgctgtttgcttgggtcgcac 609
            | |||||||| || |||| ||  |||||||||||||||||||||||||||||||| ||||
Sbjct: 1565 gtgcctgctgatacgccaatattgcatcagcactctggatgctgtttgcttgggttgcac 1506

                                                                        
Query: 610  cgagcttgttccaaagagaatagtcttgtggtttcagctgtagtgccgtcttaaatgaag 669
            | ||||||||||| || || ||||| |||||||| ||||||| ||| |||||||||||||
Sbjct: 1505 caagcttgttccagagtgagtagtcctgtggtttgagctgtactgctgtcttaaatgaag 1446
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  129 bits (65), Expect = 1e-26
 Identities = 74/77 (96%)
 Strand = Plus / Minus

                                                                            
Query: 573      gcatcagcactctggatgctgtttgcttgggtcgcaccgagcttgttccaaagagaatag 632
                |||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 24684958 gcatcagcactctggatgctgtttgcttgggtcgcacctagcttattccagagagaatag 24684899

                                 
Query: 633      tcttgtggtttcagctg 649
                |||||||||||||||||
Sbjct: 24684898 tcttgtggtttcagctg 24684882



 Score =  119 bits (60), Expect = 1e-23
 Identities = 75/80 (93%)
 Strand = Plus / Minus

                                                                            
Query: 294      aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 353
                |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 24686878 aatgcctagaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 24686819

                                    
Query: 354      gaatcacatgcagcaatcat 373
                |||||||||||||| |||||
Sbjct: 24686818 gaatcacatgcagcgatcat 24686799



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                            
Query: 487      cctggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaat 546
                ||||||||||||||||||| |||||||||||||||||||| || || |||||||| || |
Sbjct: 24685951 cctggttggcatagctaatccccatattagcccatgcacgcacataattgggctttaagt 24685892

                          
Query: 547      ctagagcctg 556
                | ||||||||
Sbjct: 24685891 ccagagcctg 24685882



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                            
Query: 407      caagtactgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccg 466
                ||||||||||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||
Sbjct: 24686511 caagtactgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcg 24686452

                                 
Query: 467      aatggaatcttcgtaca 483
                ||| || ||||| ||||
Sbjct: 24686451 aatagagtcttcataca 24686435
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>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_A06
          Length = 92836

 Score =  129 bits (65), Expect = 1e-26
 Identities = 74/77 (96%)
 Strand = Plus / Minus

                                                                         
Query: 573   gcatcagcactctggatgctgtttgcttgggtcgcaccgagcttgttccaaagagaatag 632
             |||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 57262 gcatcagcactctggatgctgtttgcttgggtcgcacctagcttattccagagagaatag 57203

                              
Query: 633   tcttgtggtttcagctg 649
             |||||||||||||||||
Sbjct: 57202 tcttgtggtttcagctg 57186



 Score =  119 bits (60), Expect = 1e-23
 Identities = 75/80 (93%)
 Strand = Plus / Minus

                                                                         
Query: 294   aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 353
             |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 59182 aatgcctagaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 59123

                                 
Query: 354   gaatcacatgcagcaatcat 373
             |||||||||||||| |||||
Sbjct: 59122 gaatcacatgcagcgatcat 59103



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                         
Query: 487   cctggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaat 546
             ||||||||||||||||||| |||||||||||||||||||| || || |||||||| || |
Sbjct: 58255 cctggttggcatagctaatccccatattagcccatgcacgcacataattgggctttaagt 58196

                       
Query: 547   ctagagcctg 556
             | ||||||||
Sbjct: 58195 ccagagcctg 58186



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                         
Query: 407   caagtactgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccg 466
             ||||||||||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||
Sbjct: 58815 caagtactgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcg 58756

                              
Query: 467   aatggaatcttcgtaca 483
             ||| || ||||| ||||
Sbjct: 58755 aatagagtcttcataca 58739
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>gb|AF056282.1|AF056282 Nicotiana tabacum clone 165 peroxisomal targeting sequence 1 receptor
            (PEX5) mRNA, partial cds
          Length = 2078

 Score =  121 bits (61), Expect = 3e-24
 Identities = 163/197 (82%)
 Strand = Plus / Minus

                                                                        
Query: 468  atggaatcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacgg 527
            |||||||| || |||| ||||||||||||||| || |||||||| || ||||||||||| 
Sbjct: 1505 atggaatcctcatacataccctggttggcataactgattcccatgtttgcccatgcacgt 1446

                                                                        
Query: 528  acgtagttgggcttcaaatctagagcctgctggtatgccagtacggcatcagcactctgg 587
            || ||||| ||||| |||||||| |||||||| || |||| ||  |||||||||||||| 
Sbjct: 1445 acatagttaggctttaaatctagcgcctgctgataagccaatattgcatcagcactctga 1386

                                                                        
Query: 588  atgctgtttgcttgggtcgcaccgagcttgttccaaagagaatagtcttgtggtttcagc 647
            | |||||| ||||| || ||||| ||||| ||||| || || |||||    ||||| |||
Sbjct: 1385 acgctgttagcttgtgttgcaccaagcttattccagagtgagtagtccctaggtttgagc 1326

                             
Query: 648  tgtagtgccgtcttaaa 664
            | |||||| ||||||||
Sbjct: 1325 tttagtgctgtcttaaa 1309
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>gb|AY111328.1| Zea mays CL29436_1 mRNA sequence
          Length = 700

 Score =  115 bits (58), Expect = 2e-22
 Identities = 136/162 (83%)
 Strand = Plus / Plus

                                                                       
Query: 429 gctttcggattcatggaaaccgcccttacatagtaccgaatggaatcttcgtacagaccc 488
           ||||| || ||||| | ||| |||||||||||||| ||||||||||| || ||||  |||
Sbjct: 539 gcttttgggttcattgcaactgcccttacatagtatcgaatggaatcctcatacaacccc 598

                                                                       
Query: 489 tggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaatct 548
           |||||||||||| |     ||||||| ||||||||||| ||||||||||| ||||| || 
Sbjct: 599 tggttggcatagattcccaccatattcgcccatgcacgcacgtagttgggtttcaagtcc 658

                                                     
Query: 549 agagcctgctggtatgccagtacggcatcagcactctggatg 590
           ||||||||||| || |||| ||  ||||||||||||||||||
Sbjct: 659 agagcctgctgatacgccaatattgcatcagcactctggatg 700



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 321 ggaaactctttctgaaggacgtcaaggttgcggg 354
           |||||||||||||||||  |||||||||||||||
Sbjct: 431 ggaaactctttctgaagagcgtcaaggttgcggg 464
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>gb|AF056283.1|AF056283 Nicotiana tabacum clone 354 peroxisomal targeting sequence 1
           receptor (PEX5) mRNA, partial cds
          Length = 1474

 Score =  105 bits (53), Expect = 2e-19
 Identities = 161/197 (81%)
 Strand = Plus / Minus

                                                                       
Query: 468 atggaatcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacgg 527
           |||||||| || |||| |||||||||||| || || |||||||| || ||||||||||| 
Sbjct: 845 atggaatcctcatacataccctggttggcgtaactgattcccatgtttgcccatgcacgt 786

                                                                       
Query: 528 acgtagttgggcttcaaatctagagcctgctggtatgccagtacggcatcagcactctgg 587
           || ||||| ||||| |||||||| |||||||| || |||| ||  |||||||||||||| 
Sbjct: 785 acatagttaggctttaaatctagcgcctgctgataagccaatattgcatcagcactctga 726

                                                                       
Query: 588 atgctgtttgcttgggtcgcaccgagcttgttccaaagagaatagtcttgtggtttcagc 647
           |  ||||| ||||| || ||||| ||||| ||||| || || |||||    ||||| |||
Sbjct: 725 acactgttagcttgtgttgcaccaagcttattccagagtgagtagtccctaggtttgagc 666

                            
Query: 648 tgtagtgccgtcttaaa 664
           | |||||| ||||||||
Sbjct: 665 tttagtgctgtcttaaa 649
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>gb|AF053104.1|AF053104 Nicotiana tabacum peroxisomal targeting signal 1 receptor (PEX5)
            mRNA, complete cds
          Length = 2823

 Score =  105 bits (53), Expect = 2e-19
 Identities = 161/197 (81%)
 Strand = Plus / Minus

                                                                        
Query: 468  atggaatcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacgg 527
            |||||||| || |||| |||||||||||| || || |||||||| || ||||||||||| 
Sbjct: 2213 atggaatcctcatacataccctggttggcgtaactgattcccatgtttgcccatgcacgt 2154

                                                                        
Query: 528  acgtagttgggcttcaaatctagagcctgctggtatgccagtacggcatcagcactctgg 587
            || ||||| ||||| |||||||| |||||||| || |||| ||  |||||||||||||| 
Sbjct: 2153 acatagttaggctttaaatctagcgcctgctgataagccaatattgcatcagcactctga 2094

                                                                        
Query: 588  atgctgtttgcttgggtcgcaccgagcttgttccaaagagaatagtcttgtggtttcagc 647
            |  ||||| ||||| || ||||| ||||| ||||| || || |||||    ||||| |||
Sbjct: 2093 acactgttagcttgtgttgcaccaagcttattccagagtgagtagtccctaggtttgagc 2034

                             
Query: 648  tgtagtgccgtcttaaa 664
            | |||||| ||||||||
Sbjct: 2033 tttagtgctgtcttaaa 2017
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>gb|AF068690.1|AF068690 Citrullus lanatus peroxisomal targeting signal-1 receptor (PEX5)
            mRNA, complete cds
          Length = 2503

 Score =  103 bits (52), Expect = 7e-19
 Identities = 127/152 (83%)
 Strand = Plus / Minus

                                                                        
Query: 486  ccctggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaa 545
            ||||| || ||||| || ||||||||||| ||||| ||||| ||||| || |||||||||
Sbjct: 1831 ccctgattagcataactgattcccatattggcccaggcacgtacgtaattaggcttcaaa 1772

                                                                        
Query: 546  tctagagcctgctggtatgccagtacggcatcagcactctggatgctgtttgcttgggtc 605
            || || ||||| || || || | ||  ||||||||||| || |||||||| ||||| || 
Sbjct: 1771 tcaagtgcctgttgataagctaatatagcatcagcactttgaatgctgttagcttgtgta 1712

                                            
Query: 606  gcaccgagcttgttccaaagagaatagtcttg 637
            ||||| |||||||||||||||||||| |||||
Sbjct: 1711 gcacctagcttgttccaaagagaataatcttg 1680
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>ref|NM_125012.3| Arabidopsis thaliana PEX5; peroxisome targeting signal-1 binding
            AT5G56290 (PEX5) mRNA, complete cds
          Length = 2460

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 118/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 486  ccctggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaa 545
            |||||||| || || || |||||||| || ||||| ||||| || || || || || |||
Sbjct: 2141 ccctggtttgcgtaactgattcccatgtttgcccaagcacgaacataatttggttttaaa 2082

                                                                        
Query: 546  tctagagcctgctggtatgccagtacggcatcagcactctggatgctgtttgcttgggtc 605
            ||||||||||| || || ||   || |||||||||||||||||  ||||| ||||| || 
Sbjct: 2081 tctagagcctgttgataagcagatatggcatcagcactctggacactgttggcttgcgtt 2022

                                      
Query: 606  gcaccgagcttgttccaaagagaata 631
            ||||| ||||| ||||| ||||||||
Sbjct: 2021 gcacctagcttattccacagagaata 1996
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>gb|AY096679.1| Arabidopsis thaliana putative peroxisomal targeting signal type 1
            receptor protein (At5g56290) mRNA, complete cds
          Length = 2218

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 118/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 486  ccctggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaa 545
            |||||||| || || || |||||||| || ||||| ||||| || || || || || |||
Sbjct: 2015 ccctggtttgcgtaactgattcccatgtttgcccaagcacgaacataatttggttttaaa 1956

                                                                        
Query: 546  tctagagcctgctggtatgccagtacggcatcagcactctggatgctgtttgcttgggtc 605
            ||||||||||| || || ||   || |||||||||||||||||  ||||| ||||| || 
Sbjct: 1955 tctagagcctgttgataagcagatatggcatcagcactctggacactgttggcttgcgtt 1896

                                      
Query: 606  gcaccgagcttgttccaaagagaata 631
            ||||| ||||| ||||| ||||||||
Sbjct: 1895 gcacctagcttattccacagagaata 1870
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>gb|AY056299.1| Arabidopsis thaliana putative peroxisomal targeting signal type 1
            receptor protein (At5g56290) mRNA, complete cds
          Length = 2470

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 118/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 486  ccctggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaa 545
            |||||||| || || || |||||||| || ||||| ||||| || || || || || |||
Sbjct: 2134 ccctggtttgcgtaactgattcccatgtttgcccaagcacgaacataatttggttttaaa 2075

                                                                        
Query: 546  tctagagcctgctggtatgccagtacggcatcagcactctggatgctgtttgcttgggtc 605
            ||||||||||| || || ||   || |||||||||||||||||  ||||| ||||| || 
Sbjct: 2074 tctagagcctgttgataagcagatatggcatcagcactctggacactgttggcttgcgtt 2015

                                      
Query: 606  gcaccgagcttgttccaaagagaata 631
            ||||| ||||| ||||| ||||||||
Sbjct: 2014 gcacctagcttattccacagagaata 1989
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>gb|AF074843.1|AF074843 Arabidopsis thaliana peroxisomal targeting signal type 1 receptor
            (PEX5) mRNA, complete cds
          Length = 2316

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 118/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 486  ccctggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaa 545
            |||||||| || || || |||||||| || ||||| ||||| || || || || || |||
Sbjct: 2144 ccctggtttgcgtaactgattcccatgtttgcccaagcacgaacataatttggttttaaa 2085

                                                                        
Query: 546  tctagagcctgctggtatgccagtacggcatcagcactctggatgctgtttgcttgggtc 605
            ||||||||||| || || ||   || |||||||||||||||||  ||||| ||||| || 
Sbjct: 2084 tctagagcctgttgataagcagatatggcatcagcactctggacactgttggcttgcgtt 2025

                                      
Query: 606  gcaccgagcttgttccaaagagaata 631
            ||||| ||||| ||||| ||||||||
Sbjct: 2024 gcacctagcttattccacagagaata 1999
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>gb|DQ288941.1| Brassica napus peroxisomal import receptor PTS1 mRNA, complete cds
          Length = 2424

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 118/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 486  ccctggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaa 545
            |||||||| || || || || ||||| || ||||| ||||| ||||| || || || |||
Sbjct: 2024 ccctggtttgcgtaactgatccccatgttcgcccaagcacgaacgtaattaggttttaaa 1965

                                                                        
Query: 546  tctagagcctgctggtatgccagtacggcatcagcactctggatgctgtttgcttgggtc 605
            || |||||||| || || ||   || |||||||||||||||||  ||||| ||||| || 
Sbjct: 1964 tccagagcctgttgataagcagatatggcatcagcactctggacactgttggcttgtgtt 1905

                                      
Query: 606  gcaccgagcttgttccaaagagaata 631
            ||||| ||||| ||||||||||||||
Sbjct: 1904 gcaccaagcttattccaaagagaata 1879
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>gb|AC147959.18| Medicago truncatula clone mth2-11c16, complete sequence
          Length = 132878

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                          
Query: 573    gcatcagcactctggatgctgtttgcttgggtcgcaccgagcttgttccaaagagaatag 632
              ||||||||||| || |  ||||||||||| || ||||| ||||||||||| ||||| || 
Sbjct: 128514 gcatcagcactttgaacactgtttgcttgtgttgcaccaagcttgttccagagagagtaa 128573

                      
Query: 633    tcttgtgg 640
              ||||||||
Sbjct: 128574 tcttgtgg 128581



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                             
Query: 398    tgaaattctcaagtactgccaggcattgtctgctttcggattcatgg 444
              |||||||||||| || ||||| ||||| |||||||| ||||||||||
Sbjct: 125017 tgaaattctcaaatattgccatgcattctctgcttttggattcatgg 125063
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>dbj|AB009049.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCD7
          Length = 87685

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 572  ggcatcagcactctggatgctgtttgcttgggtcgcaccgagcttgttccaaagagaata 631
            |||||||||||||||||  ||||| ||||| || ||||| ||||| ||||| ||||||||
Sbjct: 4559 ggcatcagcactctggacactgttggcttgcgttgcacctagcttattccacagagaata 4500
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>gb|AC093870.3| Homo sapiens BAC clone RP11-598G2 from 4, complete sequence
          Length = 193650

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 580    cactctggatgctgtttgcttgggt 604
              |||||||||||||||||||||||||
Sbjct: 176941 cactctggatgctgtttgcttgggt 176965
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>emb|BX833122.1|CNS09ZA3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL35ZB01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1270

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 102/127 (80%), Gaps = 1/127 (0%)
 Strand = Plus / Minus

                                                                       
Query: 506 tcccatattagcccatgcacggacgtagttgggcttcaaatctagagcctgctggtatgc 565
           |||||| || ||||| ||||| || || || || || |||||||||||||| || || ||
Sbjct: 979 tcccatgtttgcccaagcacgaacataatttggttttaaatctagagcctgttgataagc 920

                                                                       
Query: 566 cagtacggcatcag-cactctggatgctgtttgcttgggtcgcaccgagcttgttccaaa 624
              || |||||||| |||||||||  ||||| ||||| || ||||| ||||| ||||| |
Sbjct: 919 agatatggcatcagtcactctggacactgttggcttgcgttgcacctagcttattccaca 860

                  
Query: 625 gagaata 631
           |||||||
Sbjct: 859 gagaata 853
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>gb|AC141879.5| Mus musculus BAC clone RP24-249I4 from chromosome 16, complete sequence
          Length = 148167

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 194   caatctgtgtttgtttctcct 214
             |||||||||||||||||||||
Sbjct: 61334 caatctgtgtttgtttctcct 61314
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>emb|CR788244.9| Zebrafish DNA sequence from clone DKEY-254A16 in linkage group 18,
             complete sequence
          Length = 208154

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 3     ttttttattntttgtgcctcttgt 26
             ||||||||| ||||||||||||||
Sbjct: 68177 ttttttattatttgtgcctcttgt 68200
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>gb|AC156994.8| Mus musculus chromosome 5, clone RP23-312N12, complete sequence
          Length = 166581

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 204   ttgtttctccttcccattcca 224
             |||||||||||||||||||||
Sbjct: 75425 ttgtttctccttcccattcca 75405
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>emb|BX908749.6| Zebrafish DNA sequence from clone DKEY-247F18 in linkage group 18,
             complete sequence
          Length = 186014

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 3     ttttttattntttgtgcctcttgt 26
             ||||||||| ||||||||||||||
Sbjct: 64328 ttttttattatttgtgcctcttgt 64351
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>ref|NM_062819.2| Caenorhabditis elegans Fem-3 mRNA Binding Factor family member
            (fbf-2) (fbf-2) mRNA, complete cds
          Length = 2272

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 158  acagtaaacagaaaaacacaataacacaa 186
            |||||||||||||| | ||||||||||||
Sbjct: 2218 acagtaaacagaaagaaacaataacacaa 2190
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 166      cagaaaaacacaataacacaa 186
                |||||||||||||||||||||
Sbjct: 33387687 cagaaaaacacaataacacaa 33387667
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>gb|AC092155.3| Homo sapiens BAC clone RP11-312H10 from 2, complete sequence
          Length = 153304

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 197   tctgtgtttgtttctccttcc 217
             |||||||||||||||||||||
Sbjct: 42444 tctgtgtttgtttctccttcc 42464
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>gb|U23176.2| Caenorhabditis elegans cosmid F21H12, complete sequence
          Length = 21805

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 158  acagtaaacagaaaaacacaataacacaa 186
            |||||||||||||| | ||||||||||||
Sbjct: 6678 acagtaaacagaaagaaacaataacacaa 6706
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>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1715_H01
          Length = 138733

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 166    cagaaaaacacaataacacaa 186
              |||||||||||||||||||||
Sbjct: 128437 cagaaaaacacaataacacaa 128417
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>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1316_E06
          Length = 110197

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 166   cagaaaaacacaataacacaa 186
             |||||||||||||||||||||
Sbjct: 18306 cagaaaaacacaataacacaa 18286
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>gb|AC018365.49| Mus musculus strain 129/SvJ clone mgs1-461b11 map 5, complete sequence
          Length = 117052

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 204    ttgtttctccttcccattcca 224
              |||||||||||||||||||||
Sbjct: 108166 ttgtttctccttcccattcca 108186
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>emb|CR933785.11| Zebrafish DNA sequence from clone CH211-57C18 in linkage group 18,
             complete sequence
          Length = 66881

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 3     ttttttattntttgtgcctcttgt 26
             ||||||||| ||||||||||||||
Sbjct: 53901 ttttttattatttgtgcctcttgt 53924
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>gb|AC125079.3| Mus musculus chromosome 16 clone RP23-480M17, complete sequence
          Length = 174536

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    tctgccatgggattttacat 88
             ||||||||||||||||||||
Sbjct: 75474 tctgccatgggattttacat 75493
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>gb|AC147344.2| Pan troglodytes BAC clone CH251-4O16 from Y, complete sequence
          Length = 186607

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    ttgtatacagaattacatat 42
             ||||||||||||||||||||
Sbjct: 22449 ttgtatacagaattacatat 22430
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>gb|AC141329.4| Mus musculus BAC clone RP23-63G7 from chromosome 7, complete sequence
          Length = 153106

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    aaaaacacaataacacaatg 188
              ||||||||||||||||||||
Sbjct: 108018 aaaaacacaataacacaatg 108037
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>gb|AC122517.2| Mus musculus BAC clone RP24-459G24 from chromosome 7, complete sequence
          Length = 186032

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    aaaaacacaataacacaatg 188
              ||||||||||||||||||||
Sbjct: 179777 aaaaacacaataacacaatg 179758
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>gb|AC146206.3| Pan troglodytes BAC clone CH251-395K13 from Y, complete sequence
          Length = 161960

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     ttgtatacagaattacatat 42
              ||||||||||||||||||||
Sbjct: 152285 ttgtatacagaattacatat 152304
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>ref|XM_847882.1| PREDICTED: Canis familiaris similar to Actin-binding LIM protein 2
            (Actin-binding LIM protein family member 2) (abLIM2)
            (LOC610389), mRNA
          Length = 3487

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   tgcaaccactgtttctgcca 75
            ||||||||||||||||||||
Sbjct: 2759 tgcaaccactgtttctgcca 2778
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>ref|XM_673223.1| Plasmodium berghei strain ANKA guanylyl cyclase (PB001219.00.0)
            partial mRNA
          Length = 5982

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 162  taaacagaaaaacacaataacaca 185
            |||||| |||||||||||||||||
Sbjct: 4299 taaacaaaaaaacacaataacaca 4322
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>gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237247

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    gaaaaacacaataacacaat 187
              ||||||||||||||||||||
Sbjct: 130645 gaaaaacacaataacacaat 130664
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>emb|AL732586.6| Human DNA sequence from clone RP11-549H3 on chromosome X, complete
             sequence
          Length = 125933

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   aacagaaaaacacaataaca 183
             ||||||||||||||||||||
Sbjct: 12110 aacagaaaaacacaataaca 12091
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>gb|AC163354.3| Mus musculus BAC clone RP23-49E21 from chromosome 12, complete sequence
          Length = 248060

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 635    ttgtggtttcagctgtagtg 654
              ||||||||||||||||||||
Sbjct: 184916 ttgtggtttcagctgtagtg 184935
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>gb|AC104796.4| Homo sapiens BAC clone RP11-318E19 from 4, complete sequence
          Length = 169106

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    acagaaaaacacaataacac 184
              ||||||||||||||||||||
Sbjct: 130901 acagaaaaacacaataacac 130920
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>dbj|BS000553.1| Pan troglodytes chromosome Y clone:PTB-310C12, complete sequences
          Length = 120948

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    ttgtatacagaattacatat 42
             ||||||||||||||||||||
Sbjct: 72146 ttgtatacagaattacatat 72165
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>gb|AC078784.24| Homo sapiens 3 BAC RP11-63L4 (Roswell Park Cancer Institute Human BAC
            Library) complete sequence
          Length = 165413

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ttaccaagtgaaattctcaa 409
            ||||||||||||||||||||
Sbjct: 8456 ttaccaagtgaaattctcaa 8437
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 23       ttgtatacagaattacatat 42
                ||||||||||||||||||||
Sbjct: 23522861 ttgtatacagaattacatat 23522842
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>dbj|AK154777.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630106H22
            product:unclassifiable, full insert sequence
          Length = 3351

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 152  tagcttacagtaaacagaaa 171
            ||||||||||||||||||||
Sbjct: 3319 tagcttacagtaaacagaaa 3300
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>gb|AC152502.5| Mus musculus BAC clone RP23-415D12 from chromosome 16, complete sequence
          Length = 180876

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     tctgccatgggattttacat 88
              ||||||||||||||||||||
Sbjct: 167347 tctgccatgggattttacat 167328
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 152      tagcttacagtaaacagaaa 171
                ||||||||||||||||||||
Sbjct: 20522809 tagcttacagtaaacagaaa 20522790
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>gb|AY913763.1| Pan troglodytes ZFY (ZFY) gene, complete cds
          Length = 167166

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     ttgtatacagaattacatat 42
              ||||||||||||||||||||
Sbjct: 122602 ttgtatacagaattacatat 122621
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>gb|AC084321.37| Mus musculus strain C57BL/6J chromosome 7 clone rp23-316h18, complete
             sequence
          Length = 176639

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   aaaaacacaataacacaatg 188
             ||||||||||||||||||||
Sbjct: 96183 aaaaacacaataacacaatg 96164
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>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1254_E07
          Length = 124028

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   tagcttacagtaaacagaaa 171
             ||||||||||||||||||||
Sbjct: 40456 tagcttacagtaaacagaaa 40437
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>gb|AC153862.8| Mus musculus 10 BAC RP23-353K11 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 223830

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   tagcttacagtaaacagaaa 171
             ||||||||||||||||||||
Sbjct: 93186 tagcttacagtaaacagaaa 93205


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,052,802
Number of Sequences: 3902068
Number of extensions: 6052802
Number of successful extensions: 116041
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 115843
Number of HSP's gapped (non-prelim): 194
length of query: 672
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 649
effective length of database: 17,143,297,704
effective search space: 11126000209896
effective search space used: 11126000209896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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