>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence
          Length = 153766

 Score =  194 bits (98), Expect = 2e-46
 Identities = 140/154 (90%)
 Strand = Plus / Plus

                                                                         
Query: 159   ttattgaaggcaacacaaacactccttggcgggcttgtccgatgcagctccttgccataa 218
             ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||
Sbjct: 94160 ttattgaaggcaacacaaacactccttggcgggcttgtcagatgcagctcgttggcataa 94219

                                                                         
Query: 219   ctagttaagccacgacgacttgtgcaatttccacaccgttcttggtgcacagatcgtggc 278
             ||||||||||   ||||||||| ||||||||  ||  |||||||||||||||||||||||
Sbjct: 94220 ctagttaagctgtgacgacttgcgcaatttcggcattgttcttggtgcacagatcgtggc 94279

                                               
Query: 279   attcactggtgcagcgttccatggcatcgttccc 312
             || |||| |||||||||||||||||||| |||||
Sbjct: 94280 atccactagtgcagcgttccatggcatctttccc 94313



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                        
Query: 311   ccagatggagttactttgttacacaaggaagccgtgcaccccaacttgcagtagttgac 369
             |||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||
Sbjct: 94545 ccagatggagttactttgttgcacaaggaagccttgcaccccagcttgcagtagttgac 94603



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 76/87 (87%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                         
Query: 103   taaaattgcaacacaagtaacatttgacat-atactggtcttggatgcgacatccagtta 161
             |||||||| |||||||||||||||||||||  ||||| | ||||||| |||| ||| |||
Sbjct: 89611 taaaattgtaacacaagtaacatttgacatcctactgatattggatgtgacacccaatta 89670

                                        
Query: 162   ttgaaggcaacacaaacactccttggc 188
             |||||| ||||| || |||||||||||
Sbjct: 89671 ttgaagacaacataatcactccttggc 89697



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/95 (84%)
 Strand = Plus / Plus

                                                                         
Query: 384   tctctatatcaatataaccggacttgcattcagttccagcgtcgtttgatatatagccgg 443
             |||||||||| ||| |||||||||||||||||  ||||||| ||| ||||||||||||  
Sbjct: 95006 tctctatatctataaaaccggacttgcattcaaatccagcggcgtctgatatatagccat 95065

                                                
Query: 444   cggaaacaccgcannactctgagacantgctatca 478
             | |||  ||||||  ||||||||||  ||||||||
Sbjct: 95066 cagaagaaccgcagcactctgagacggtgctatca 95100



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                        
Query: 311   ccagatggagttactttgttacacaaggaagccgtgcaccccaacttgcagtagttgac 369
             ||||||| ||||| | |||| |||| ||||||||||||||||| |||||||||||||||
Sbjct: 90272 ccagatgaagttaatgtgttgcacacggaagccgtgcaccccagcttgcagtagttgac 90330

>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome
              condensation factor (CCF), putative resistance protein
              (RGA-2), putative resistance protein (RGA2) and putative
              nodulin-like-like protein (NLL) gene, complete cds; and
              retrotransposons Josephine, Angela-2, Angela-4, Heidi,
              Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5,
              Barbara, Isabelle, Erika-2, and Claudia
          Length = 211009

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                          
Query: 112    aacacaagtaacatttgacatatactggtcttggatgcgacatccagttattgaaggcaa 171
              ||||||||||||||||||||| ||||| | |||| || |||||||| |||||||||||||
Sbjct: 181652 aacacaagtaacatttgacatctactgatattgggtgtgacatccaattattgaaggcaa 181711

                               
Query: 172    cacaaacactccttggc 188
              || ||||||||||||||
Sbjct: 181712 cataaacactccttggc 181728



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                   
Query: 142    ttggatgcgacatccagttattgaaggcaacacaaacactccttggcgggctt 194
              ||||||| || ||||| | | ||||||||||| || ||||||||||| |||||
Sbjct: 179148 ttggatgtgaaatccaatcactgaaggcaacataagcactccttggctggctt 179200

>ref|NM_196389.1| Oryza sativa (japonica cultivar-group) putative retroelement
            (OSJNBa0044A10.5), mRNA
          Length = 3513

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 4    aatgtctacgccaaggataca 24
            |||||||||||||||||||||
Sbjct: 1774 aatgtctacgccaaggataca 1794

>gb|AC146546.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062M03
              map near S6115, complete sequence
          Length = 138223

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      aatgtctacgccaaggataca 24
              |||||||||||||||||||||
Sbjct: 102986 aatgtctacgccaaggataca 102966

>gb|AC146525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0060D22
              map near S6115, complete sequence
          Length = 139929

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 4      aatgtctacgccaaggataca 24
              |||||||||||||||||||||
Sbjct: 127858 aatgtctacgccaaggataca 127878

>gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0044A10, from chromosome 10, complete sequence
          Length = 169270

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     aatgtctacgccaaggataca 24
             |||||||||||||||||||||
Sbjct: 19238 aatgtctacgccaaggataca 19258

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 4        aatgtctacgccaaggataca 24
                |||||||||||||||||||||
Sbjct: 12247639 aatgtctacgccaaggataca 12247619

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 4        aatgtctacgccaaggataca 24
                |||||||||||||||||||||
Sbjct: 13063719 aatgtctacgccaaggataca 13063739

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 4        aatgtctacgccaaggataca 24
                |||||||||||||||||||||
Sbjct: 18032303 aatgtctacgccaaggataca 18032283



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 4        aatgtctacgccaaggatac 23
                ||||||||||||||||||||
Sbjct: 13158264 aatgtctacgccaaggatac 13158283

>dbj|AP005489.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0013H03
          Length = 152998

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      aatgtctacgccaaggataca 24
              |||||||||||||||||||||
Sbjct: 117338 aatgtctacgccaaggataca 117318

>emb|BX908747.25| Zebrafish DNA sequence from clone DKEY-58J15 in linkage group 1,
            complete sequence
          Length = 232503

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 326  ttgttacacaaggaagccgtg 346
            |||||||||||||||||||||
Sbjct: 9575 ttgttacacaaggaagccgtg 9555

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 4        aatgtctacgccaaggataca 24
                |||||||||||||||||||||
Sbjct: 13071059 aatgtctacgccaaggataca 13071079

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 4        aatgtctacgccaaggataca 24
                |||||||||||||||||||||
Sbjct: 12326946 aatgtctacgccaaggataca 12326926

>dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1090H08
          Length = 200720

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     aatgtctacgccaaggataca 24
             |||||||||||||||||||||
Sbjct: 36099 aatgtctacgccaaggataca 36079

>ref|XM_631184.1| Dictyostelium discoideum hypothetical protein (DDB0219427), partial
           mRNA
          Length = 1002

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 95  attggagctaaaattgcaac 114
           ||||||||||||||||||||
Sbjct: 977 attggagctaaaattgcaac 958

>gb|AC137748.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0076A09,
              complete sequence
          Length = 157010

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      atgtctacgccaaggataca 24
              ||||||||||||||||||||
Sbjct: 123030 atgtctacgccaaggataca 123011

>gb|AC137747.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0051L16, complete sequence
          Length = 175461

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     atgtctacgccaaggataca 24
             ||||||||||||||||||||
Sbjct: 26849 atgtctacgccaaggataca 26830

>gb|AY360387.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0003M24,
             complete sequence
          Length = 150085

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     aatgtctacgccaaggatac 23
             ||||||||||||||||||||
Sbjct: 25262 aatgtctacgccaaggatac 25243

>gb|AY326313.1| Paenibacillus sp. Dex70-34 RNA binding protein-like protein gene,
            partial cds; dextranase 1 (dex1) gene, complete cds; and
            methyl-accepting chemotaxis protein histidine kinase
            gene, partial cds
          Length = 4615

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 294  gttccatggcatcgttccca 313
            ||||||||||||||||||||
Sbjct: 4344 gttccatggcatcgttccca 4363

>gb|AC108797.8| Mus musculus chromosome 3, clone RP23-349M18, complete sequence
          Length = 208211

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   gacttgcattcagttccagc 423
             ||||||||||||||||||||
Sbjct: 99147 gacttgcattcagttccagc 99166

>emb|AL356552.8| Human DNA sequence from clone RP4-732F8 on chromosome 1p34.3-36.11
            Contains GSSs, complete sequence
          Length = 25633

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 89   agccttattggagctaaaat 108
            ||||||||||||||||||||
Sbjct: 2139 agccttattggagctaaaat 2158

>gb|AC108685.4| Homo sapiens X BAC RP11-323F16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 178333

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     gccttattggagctaaaatt 109
              ||||||||||||||||||||
Sbjct: 102244 gccttattggagctaaaatt 102263

>gb|AC144807.23| Medicago truncatula clone mth2-9j13, complete sequence
          Length = 115904

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    acaacaaaaacatctaatat 41
             ||||||||||||||||||||
Sbjct: 58947 acaacaaaaacatctaatat 58928

>gb|AC106882.5| Homo sapiens BAC clone RP11-768B22 from 4, complete sequence
          Length = 176692

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 376   tgaaactttctctatatcaa 395
             ||||||||||||||||||||
Sbjct: 31283 tgaaactttctctatatcaa 31302

>gb|AC106713.3| Homo sapiens X BAC RP11-770A12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 125790

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    gccttattggagctaaaatt 109
             ||||||||||||||||||||
Sbjct: 78077 gccttattggagctaaaatt 78058

>gb|AC096774.1| Homo sapiens BAC clone RP11-286D5 from 4, complete sequence
          Length = 178438

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    caaggatacaacaaaaacat 34
             ||||||||||||||||||||
Sbjct: 16755 caaggatacaacaaaaacat 16736

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 4        aatgtctacgccaaggatac 23
                ||||||||||||||||||||
Sbjct: 17110239 aatgtctacgccaaggatac 17110258

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 5        atgtctacgccaaggataca 24
                ||||||||||||||||||||
Sbjct: 15094280 atgtctacgccaaggataca 15094261

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    tccttggcgggcttgtccga 200
              ||||||||||||||||||||
Sbjct: 107672 tccttggcgggcttgtccga 107653

>dbj|AP005967.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1089G05
          Length = 161420

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      aatgtctacgccaaggatac 23
              ||||||||||||||||||||
Sbjct: 111091 aatgtctacgccaaggatac 111110

>dbj|AP006482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone: B1101E07
          Length = 158084

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aatgtctacgccaaggatac 23
             ||||||||||||||||||||
Sbjct: 34615 aatgtctacgccaaggatac 34634

>dbj|AP006481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone: B1100F03
          Length = 139217

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      aatgtctacgccaaggatac 23
              ||||||||||||||||||||
Sbjct: 138784 aatgtctacgccaaggatac 138803


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,354,690
Number of Sequences: 3902068
Number of extensions: 3354690
Number of successful extensions: 52632
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52463
Number of HSP's gapped (non-prelim): 168
length of query: 518
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 495
effective length of database: 17,143,297,704
effective search space: 8485932363480
effective search space used: 8485932363480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)