ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags31n21 |
|---|---|
| Clone Library Name | barley_pub |
>FRIGI_ARATH (Q9FDW0) FRIGIDA protein| Length = 609 Score = 38.9 bits (89), Expect = 0.013 Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 19/110 (17%) Frame = -1 Query: 624 KNGKMSPGAQNEMNERELSALKAVIKCIEEHKLE--EQYP-------VDPLQKRVIQLEK 472 K SP A E ++L+ L +V++C+E HKL+ ++ P + L+K +QL+K Sbjct: 367 KRKAQSPLAFKEAATKQLAVLSSVMQCMETHKLDPAKELPGWQIKEQIVSLEKDTLQLDK 426 Query: 471 AKADKRRAV----EAA------KPQSKRPRANGSLYAPRVTSFPEKSFYQ 352 +K R++ EAA Q KRPR + + P VTS Y+ Sbjct: 427 EMEEKARSLSLMEEAALAKRMYNQQIKRPRLS-PMEMPPVTSSSYSPIYR 475
>DAPF_STRCO (O69969) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 289 Score = 35.8 bits (81), Expect = 0.11 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = -2 Query: 440 PPSHSPRGRVPTGRSMHPVSPASPRRASTRQHQRGT 333 PPSH+P G P G ++ V PR + R H+RG+ Sbjct: 177 PPSHAPAGAYPDGVNVEFVVDRGPRHVAMRVHERGS 212
>YMU1_YEAST (Q12231) Transposon Ty1 protein A| Length = 440 Score = 34.3 bits (77), Expect = 0.32 Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Frame = -1 Query: 519 QYPVDPLQKRVIQLEKAKADKRRAVEAAKPQSKRPRANGSLYAPRVTSFPEKSFYQATPE 340 Q P+D ++ + +KA K + + P S N +P+ S P P+ Sbjct: 30 QDPLDVSASKIQEYDKAST-KANSQQTTTPASSAVPENPHHASPQPASVPP-------PQ 81 Query: 339 RHPYPYERQFVY------GAEAHHHPTMINGAPYTISPTHTP 232 PYP + G + HP+MI PY +SP + P Sbjct: 82 NGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPMYFP 123
>YJZ6_YEAST (P47097) Transposon Ty1 protein A| Length = 440 Score = 34.3 bits (77), Expect = 0.32 Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 6/102 (5%) Frame = -1 Query: 519 QYPVDPLQKRVIQLEKAKADKRRAVEAAKPQSKRPRANGSLYAPRVTSFPEKSFYQATPE 340 Q P+D + + EKA K + + P S N +P+ S P P+ Sbjct: 30 QDPLDVSASKTEECEKAST-KANSQQTTTPASSAVPENPHHASPQPASVPP-------PQ 81 Query: 339 RHPYPYERQFVY------GAEAHHHPTMINGAPYTISPTHTP 232 PYP + G + HP+MI PY +SP + P Sbjct: 82 NGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPMYFP 123
>CHEB1_VIBVY (Q7MIQ5) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 376 Score = 34.3 bits (77), Expect = 0.32 Identities = 27/91 (29%), Positives = 44/91 (48%) Frame = -1 Query: 603 GAQNEMNERELSALKAVIKCIEEHKLEEQYPVDPLQKRVIQLEKAKADKRRAVEAAKPQS 424 GA+ ++ + AL + K E+ V LQ+RVIQ+ +A RR V ++ P Sbjct: 88 GAKATLDALDAGALDFLPKKFEDIARNRDEAVSLLQQRVIQIASKRAFMRRPVASSTPVQ 147 Query: 423 KRPRANGSLYAPRVTSFPEKSFYQATPERHP 331 +RP++ +L P T ++ QA R P Sbjct: 148 ERPQS--TLNRP-TTGLRREASAQAPVSRAP 175
>YJZ7_YEAST (P47098) Transposon Ty1 protein B| Length = 1755 Score = 34.3 bits (77), Expect = 0.32 Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 6/102 (5%) Frame = -1 Query: 519 QYPVDPLQKRVIQLEKAKADKRRAVEAAKPQSKRPRANGSLYAPRVTSFPEKSFYQATPE 340 Q P+D + + EKA K + + P S N +P+ S P P+ Sbjct: 30 QDPLDVSASKTEECEKAST-KANSQQTTTPASSAVPENPHHASPQPASVPP-------PQ 81 Query: 339 RHPYPYERQFVY------GAEAHHHPTMINGAPYTISPTHTP 232 PYP + G + HP+MI PY +SP + P Sbjct: 82 NGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPMYFP 123
>CHEB1_VIBVU (Q8DB67) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 376 Score = 33.9 bits (76), Expect = 0.42 Identities = 20/65 (30%), Positives = 34/65 (52%) Frame = -1 Query: 603 GAQNEMNERELSALKAVIKCIEEHKLEEQYPVDPLQKRVIQLEKAKADKRRAVEAAKPQS 424 GA+ ++ + AL + K E+ V LQ+RVIQ+ +A RR V ++ P Sbjct: 88 GAKATLDALDAGALDFLPKKFEDIARNRDEAVSLLQQRVIQIASKRAFMRRPVASSTPVQ 147 Query: 423 KRPRA 409 +RP++ Sbjct: 148 ERPQS 152
>YME5_YEAST (Q04706) Transposon Ty1 protein A| Length = 440 Score = 33.5 bits (75), Expect = 0.55 Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Frame = -1 Query: 519 QYPVDPLQKRVIQLEKAKADKRRAVEAAKPQSKRPRANGSLYAPRVTSFPEKSFYQATPE 340 Q P+D ++ + +KA K + + P S N +P+ S P P+ Sbjct: 30 QDPLDVSASKIQEYDKAST-KANSQQTTTPASSAVPENLHHASPQPASVPP-------PQ 81 Query: 339 RHPYPYERQFVY------GAEAHHHPTMINGAPYTISPTHTP 232 PYP + G + HP+MI PY +SP + P Sbjct: 82 NGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPMYFP 123
>US26_HCMVA (P09699) Hypothetical protein HHLF5| Length = 603 Score = 33.5 bits (75), Expect = 0.55 Identities = 17/65 (26%), Positives = 31/65 (47%) Frame = -1 Query: 609 SPGAQNEMNERELSALKAVIKCIEEHKLEEQYPVDPLQKRVIQLEKAKADKRRAVEAAKP 430 SPG+ + ER L+ +K + + K ++++ +D Q+RV+ A+A KP Sbjct: 531 SPGSLEGVEERMLNVMKEAVAEQDRKKTQKKHKIDTAQRRVLTRRAARAAVLEGRPTPKP 590 Query: 429 QSKRP 415 P Sbjct: 591 TMPHP 595
>PRE_STRAG (P13925) Plasmid recombination enzyme (Mobilization protein)| Length = 494 Score = 33.1 bits (74), Expect = 0.71 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%) Frame = -1 Query: 594 NEMNER--ELSALKAVIKCIEEHKLEEQYPVDPLQKRVIQLEKAKADK--RRAVEAAKPQ 427 +E +ER ELS + I +E H + ++ L+ +QLEK KA K +A+ ++ + Sbjct: 298 SEASERASELSKAEGYINTLENHSKSLEAKIECLESDNLQLEKQKATKLEAKALNESELR 357 Query: 426 SKRPRANGSLYAPRVTSFPEKSFYQATPER 337 +P+ N F K Y+ +PE+ Sbjct: 358 ELKPKKN----------FLGKEHYELSPEQ 377
>YMT6_YEAST (Q04215) Transposon Ty1 protein A| Length = 440 Score = 32.7 bits (73), Expect = 0.93 Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 8/123 (6%) Frame = -1 Query: 546 CIEEHKLEEQYPVDPLQKRVIQLEKAK--ADKRRAVEAAKPQSKRPRANGSLYAPRVTSF 373 C E Q DPL + E+ + + + + + P S N +P+ Sbjct: 18 CASVTSKEVQTTQDPLDISASKTEECEKVSTQANSQQPTTPLSSAVPENHHHASPQAAQV 77 Query: 372 PEKSFYQATPERHPYPYERQF------VYGAEAHHHPTMINGAPYTISPTHTPYYGNGYP 211 P P+ PYP +R + G + HP+++ PY +SP + P Sbjct: 78 P-------LPQNGPYPQQRMMNTQQANISGWPVYGHPSLMPYPPYQMSPMYAPPGAQSQF 130 Query: 210 VQY 202 QY Sbjct: 131 TQY 133
>TRI41_HUMAN (Q8WV44) Tripartite motif protein 41| Length = 630 Score = 32.7 bits (73), Expect = 0.93 Identities = 19/57 (33%), Positives = 31/57 (54%) Frame = -1 Query: 543 IEEHKLEEQYPVDPLQKRVIQLEKAKADKRRAVEAAKPQSKRPRANGSLYAPRVTSF 373 ++E+K + Q V+PL+K + ++K KA + R V K Q K A + R+T F Sbjct: 267 VQEYKAKLQEHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRF 323
>RL4A_XENLA (P08429) 60S ribosomal protein L4-A (L1A)| Length = 396 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 7/50 (14%) Frame = -1 Query: 558 AVIKCIEEHKLEEQYPVD-------PLQKRVIQLEKAKADKRRAVEAAKP 430 A+++ +E K +E+ P D PL + ++ AKA KR+A EAAKP Sbjct: 343 AILQQLENIKAKEKKPDDGKPKAKKPLDAKTKMIKLAKAKKRQAREAAKP 392
>YTY1_YEAST (P08405) Transposon Ty1-15 52 kDa hypothetical protein| Length = 440 Score = 31.2 bits (69), Expect = 2.7 Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 6/102 (5%) Frame = -1 Query: 519 QYPVDPLQKRVIQLEKAKADKRRAVEAAKPQSKRPRANGSLYAPRVTSFPEKSFYQATPE 340 Q P+D + + EKA K + + P S N +P+ +P+ Sbjct: 30 QDPLDVSASKTEECEKAST-KANSQQTTTPASSAVPENPHHASPQTAQ-------SHSPQ 81 Query: 339 RHPYPYERQFVY------GAEAHHHPTMINGAPYTISPTHTP 232 PYP + G + HP+MI PY +SP + P Sbjct: 82 NGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPMYFP 123
>YJZ8_YEAST (P47099) Transposon Ty1 protein A| Length = 440 Score = 31.2 bits (69), Expect = 2.7 Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 6/102 (5%) Frame = -1 Query: 519 QYPVDPLQKRVIQLEKAKADKRRAVEAAKPQSKRPRANGSLYAPRVTSFPEKSFYQATPE 340 Q P+D + + EKA K + + P S N +P+ +P+ Sbjct: 30 QDPLDVSASKTEECEKAST-KANSQQTTTPASSAVPENPHHASPQTAQ-------SHSPQ 81 Query: 339 RHPYPYERQFVY------GAEAHHHPTMINGAPYTISPTHTP 232 PYP + G + HP+MI PY +SP + P Sbjct: 82 NGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPMYFP 123
>YJZ9_YEAST (P47100) Transposon Ty1 protein B| Length = 1755 Score = 31.2 bits (69), Expect = 2.7 Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 6/102 (5%) Frame = -1 Query: 519 QYPVDPLQKRVIQLEKAKADKRRAVEAAKPQSKRPRANGSLYAPRVTSFPEKSFYQATPE 340 Q P+D + + EKA K + + P S N +P+ +P+ Sbjct: 30 QDPLDVSASKTEECEKAST-KANSQQTTTPASSAVPENPHHASPQTAQ-------SHSPQ 81 Query: 339 RHPYPYERQFVY------GAEAHHHPTMINGAPYTISPTHTP 232 PYP + G + HP+MI PY +SP + P Sbjct: 82 NGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPMYFP 123
>KIFC1_HUMAN (Q9BW19) Kinesin-like protein KIFC1 (Kinesin-like protein 2)| (Kinesin-related protein HSET) Length = 673 Score = 31.2 bits (69), Expect = 2.7 Identities = 21/84 (25%), Positives = 41/84 (48%) Frame = -1 Query: 600 AQNEMNERELSALKAVIKCIEEHKLEEQYPVDPLQKRVIQLEKAKADKRRAVEAAKPQSK 421 AQ E ++EL L+A + +EE ++ V LQK+ ++L++ + +E + + + Sbjct: 197 AQAEQGQQELKNLRACVLELEERLSTQEGLVQELQKKQVELQEERRGLMSQLEEKERRLQ 256 Query: 420 RPRANGSLYAPRVTSFPEKSFYQA 349 A S V S +++ QA Sbjct: 257 TSEAALSSSQAEVASLRQETVAQA 280
>MST1_DROHY (Q08695) Axoneme-associated protein mst101(1)| Length = 344 Score = 30.8 bits (68), Expect = 3.5 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = -1 Query: 642 KKVSHGKNGKMSPG-AQNEMNERELSALKAVIKCIEEHKLEEQYPVDPLQKRVIQLEKAK 466 KK + GK+G + A+ E+E + K KC E K E++ + EK Sbjct: 47 KKSAKGKDGDLKKKCAEAAKKEKEAAEKK---KCAEAAKKEKEAAEKKKCAEAAKKEKEA 103 Query: 465 ADKRRAVEAAKPQSK 421 A+K++ EAAK + + Sbjct: 104 AEKKKCAEAAKKEKE 118
>RFX2_HUMAN (P48378) DNA-binding protein RFX2| Length = 723 Score = 30.8 bits (68), Expect = 3.5 Identities = 25/89 (28%), Positives = 39/89 (43%) Frame = -1 Query: 459 KRRAVEAAKPQSKRPRANGSLYAPRVTSFPEKSFYQATPERHPYPYERQFVYGAEAHHHP 280 +R V+AA K + + PRV P+ Q P +H YP + Q+V G +A + Sbjct: 30 QRVLVQAASSNPKGSQMQ-PISLPRVQQVPQ----QVQPVQHVYPAQVQYVEGGDAVYTN 84 Query: 279 TMINGAPYTISPTHTPYYGNGYPVQYQVP 193 I A YT +P Y + ++ P Sbjct: 85 GAIRTA-YTYNPEPQMYAPSSTASYFEAP 112
>DUO1_ASHGO (Q75ED7) DASH complex subunit DUO1 (Outer kinetochore protein DUO1)| Length = 209 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Frame = -1 Query: 525 EEQYPVDPLQKRVIQLEKAKADKRRAVEAAKPQSKRP-RANGSLYAPR 385 ++Q ++ L+K+V +L + K D+RRAVEAA + P R G+ PR Sbjct: 143 QQQAYMESLRKQVEELRR-KVDERRAVEAAAAAPRAPERTRGASGIPR 189
>RELA_MYXXA (O52177) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 757 Score = 30.4 bits (67), Expect = 4.6 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 12/66 (18%) Frame = -1 Query: 405 GSLYAPRVTSFPEKSFYQATPERHP------YP------YERQFVYGAEAHHHPTMINGA 262 G++ P V S+ SF +PERHP +P ++ +VY A+ H +G Sbjct: 3 GNVAPPLVQSYDCSSF-DDSPERHPPTVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGE 61 Query: 261 PYTISP 244 PY + P Sbjct: 62 PYLVHP 67
>RS20_STRT2 (Q5M4T9) 30S ribosomal protein S20| Length = 83 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 6/55 (10%) Frame = -1 Query: 597 QNEMNERELSALKAVIKCIEEHKLEEQYPV------DPLQKRVIQLEKAKADKRR 451 QNE N + SAL+ VIK + + EE + K +I KA DK R Sbjct: 22 QNEKNSAQKSALRTVIKAFKANPTEEAFRAASASIDKAASKGLIHKNKASRDKSR 76
>RS20_STRT1 (Q5M080) 30S ribosomal protein S20| Length = 83 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 6/55 (10%) Frame = -1 Query: 597 QNEMNERELSALKAVIKCIEEHKLEEQYPV------DPLQKRVIQLEKAKADKRR 451 QNE N + SAL+ VIK + + EE + K +I KA DK R Sbjct: 22 QNEKNSAQKSALRTVIKAFKANPTEEAFRAASASIDKAASKGLIHKNKASRDKSR 76
>PROL1_HUMAN (Q99935) Proline-rich protein 1 precursor (PRL1) (Basic| proline-rich lacrimal protein) Length = 201 Score = 29.6 bits (65), Expect = 7.9 Identities = 31/91 (34%), Positives = 37/91 (40%), Gaps = 13/91 (14%) Frame = -3 Query: 370 REELLPGNTREAPIPLRKAVCVRR*SPPPPYDDKRCSLHHLTHPHAVLR*WLPGAVP--- 200 R LPG P PL + V SPPPPYD + S L ++PG VP Sbjct: 26 RRPYLPGQL--PPPPLYRPRWVPP-SPPPPYDSRLNSPLSLP--------FVPGRVPPSS 74 Query: 199 ----------GALYPLMGESYKVHGLFPNYP 137 L+PL ES + LFP YP Sbjct: 75 FSRFSQAVILSQLFPL--ESIRQPRLFPGYP 103
>MOES_RAT (O35763) Moesin (Membrane-organizing extension spike protein)| Length = 576 Score = 29.6 bits (65), Expect = 7.9 Identities = 20/63 (31%), Positives = 31/63 (49%) Frame = -1 Query: 597 QNEMNERELSALKAVIKCIEEHKLEEQYPVDPLQKRVIQLEKAKADKRRAVEAAKPQSKR 418 + E ERE L +K IEE + Q ++ +R ++LE+ + KR EA K +R Sbjct: 335 EKEKIEREKEELMEKLKQIEEQTKKAQQELEEQTRRALELEQER--KRAQSEAEKLAKER 392 Query: 417 PRA 409 A Sbjct: 393 QEA 395
>MOES_MOUSE (P26041) Moesin (Membrane-organizing extension spike protein)| Length = 576 Score = 29.6 bits (65), Expect = 7.9 Identities = 20/63 (31%), Positives = 31/63 (49%) Frame = -1 Query: 597 QNEMNERELSALKAVIKCIEEHKLEEQYPVDPLQKRVIQLEKAKADKRRAVEAAKPQSKR 418 + E ERE L +K IEE + Q ++ +R ++LE+ + KR EA K +R Sbjct: 335 EKEKIEREKEELMEKLKQIEEQTKKAQQELEEQTRRALELEQER--KRAQSEAEKLAKER 392 Query: 417 PRA 409 A Sbjct: 393 QEA 395
>ARAF_ECOLI (P02924) L-arabinose-binding periplasmic protein precursor (EC| 3.6.3.17) (ABP) Length = 329 Score = 29.6 bits (65), Expect = 7.9 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = -1 Query: 450 AVEAAKPQSKRPRANGSLYAPRVTSFPEKSFYQATPERHPYP 325 A+ A + + R R GS+ A + FPEK YQ + + P Sbjct: 162 AITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKSNDIP 203
>CBX4_HUMAN (O00257) Chromobox protein homolog 4 (Polycomb 2 homolog) (Pc2)| (hPc2) Length = 558 Score = 29.6 bits (65), Expect = 7.9 Identities = 25/105 (23%), Positives = 38/105 (36%), Gaps = 19/105 (18%) Frame = -1 Query: 525 EEQYPVDPLQKRVIQLEKAKAD---KRRAVEAAKPQSKRPRANGSL-YAPRVTSFPEKSF 358 E P D K+ E+ K + KRR E + +P+ GS +P +F E+ Sbjct: 299 ERHPPADRTFKKAAGAEEKKVEAPPKRREEEVSGVSDPQPQDAGSRKLSPTKEAFGEQPL 358 Query: 357 YQAT---------------PERHPYPYERQFVYGAEAHHHPTMIN 268 T P HP+P+ + HHH +N Sbjct: 359 QLTTKPDLLAWDPARNTHPPSHHPHPHPHHHHHHHHHHHHAVGLN 403
>NO75_LUPLU (Q06841) Early nodulin 75 protein (N-75) (NGM-75) (Fragment)| Length = 434 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/46 (32%), Positives = 19/46 (41%) Frame = -1 Query: 345 PERHPYPYERQFVYGAEAHHHPTMINGAPYTISPTHTPYYGNGYPV 208 P + PYER +H P + P+ SP H P Y PV Sbjct: 254 PPVYEPPYERSPPVHPPSHEKPPFVYPPPHEKSPMHEPPYEKAPPV 299
>RADI_HUMAN (P35241) Radixin| Length = 583 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/63 (28%), Positives = 34/63 (53%) Frame = -1 Query: 597 QNEMNERELSALKAVIKCIEEHKLEEQYPVDPLQKRVIQLEKAKADKRRAVEAAKPQSKR 418 + E ERE L +K IEE ++ Q ++ ++ ++L++ +++RA E A+ K Sbjct: 336 EKERIEREKEELMERLKQIEEQTIKAQKELEEQTRKALELDQ---ERKRAKEEAERLEKE 392 Query: 417 PRA 409 RA Sbjct: 393 RRA 395
>RADI_CHICK (Q9PU45) Radixin| Length = 583 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/63 (28%), Positives = 34/63 (53%) Frame = -1 Query: 597 QNEMNERELSALKAVIKCIEEHKLEEQYPVDPLQKRVIQLEKAKADKRRAVEAAKPQSKR 418 + E ERE L ++ IEE ++ Q ++ +R ++L++ +++RA E A+ K Sbjct: 336 EKERIEREKEELMERLRQIEEQTMKAQKELEEQTRRALELDQ---ERKRAKEEAERLEKE 392 Query: 417 PRA 409 RA Sbjct: 393 RRA 395 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,591,745 Number of Sequences: 219361 Number of extensions: 1899653 Number of successful extensions: 6033 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5668 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6002 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
