ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY052154.1| Triticum aestivum porphobilinogen deaminase mRNA,... 874 0.0
2ref|XM_464263.2| Oryza sativa (japonica cultivar-group), mRNA 416 e-113
3ref|XM_464262.1| Oryza sativa (japonica cultivar-group), mRNA 416 e-113
4dbj|AK102265.1| Oryza sativa (japonica cultivar-group) cDNA clon... 416 e-113
5dbj|AK060914.1| Oryza sativa (japonica cultivar-group) cDNA clon... 416 e-113
6gb|AY107718.1| Zea mays PCO070684 mRNA sequence 359 7e-96
7emb|Y12809.1|ZMY12809 Zea mays mRNA for putative porphobilinogen... 327 3e-86
8gb|AY105442.1| Zea mays PCO070685 mRNA sequence 307 2e-80
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
10dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
11gb|AC146562.17| Medicago truncatula clone mth2-14d10, complete s... 74 6e-10
12ref|NM_120911.2| Arabidopsis thaliana hydroxymethylbilane syntha... 66 1e-07
13gb|AY123037.1| Arabidopsis thaliana putative hydroxymethylbilane... 66 1e-07
14emb|X73535.1|ATHEMC A.thaliana gene for porphobilinogen deaminase 66 1e-07
15emb|X73839.1|ATHEM A.thaliana gene for hemC 66 1e-07
16gb|AY070431.1| Arabidopsis thaliana putative hydroxymethylbilane... 66 1e-07
17emb|AL392174.1|ATF8L15 Arabidopsis thaliana DNA chromosome 5, BA... 66 1e-07
18gb|AF419614.1|AF419614 Arabidopsis thaliana AT5g08280/F8L15_10 m... 66 1e-07
19dbj|AK220878.1| Arabidopsis thaliana mRNA for hydroxymethylbilan... 66 1e-07
20emb|BX832351.1|CNS0A0WZ Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
21emb|BX831339.1|CNS0A0OW Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
22emb|BX830739.1|CNS0A0NT Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
23gb|AY087012.1| Arabidopsis thaliana clone 3051 mRNA, complete se... 66 1e-07
24emb|X73418.1|PSHEMCA P.sativum hemC mRNA for hydroxymethylbilane... 58 4e-05
25dbj|AB050116.1| Amaranthus tricolor PBGD mRNA for porphobilinoge... 54 6e-04
26gb|DQ121376.1| Uncultured bacterium clone YC01G10, partial sequence 46 0.14
27gb|AC133600.2| Mus musculus BAC clone RP24-399N24 from chromosom... 44 0.54
28gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 2.1
29emb|AL109964.20|HS1118M15 Human DNA sequence from clone RP5-1118... 42 2.1
30emb|AL928922.7| Mouse DNA sequence from clone RP23-431J22 on chr... 42 2.1
31gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome 40 8.5
32gb|AC118802.7| Rattus norvegicus 13 BAC CH230-72B9 (Children's H... 40 8.5
33gb|AC163995.4| Mus musculus chromosome 5, clone RP24-242C19, com... 40 8.5
34gb|AC116551.2| Dictyostelium discoideum chromosome 2 map complem... 40 8.5
35gb|AF131216.2| Homo sapiens chromosome 8 map 8p23-p22 clone CTB-... 40 8.5
36gb|AC124555.4| Mus musculus BAC clone RP23-245K17 from chromosom... 40 8.5
37emb|CR626884.13| Zebrafish DNA sequence from clone DKEY-83H2 in ... 40 8.5
38emb|CT025638.1| Pan troglodytes chromosome X clone PTB-083N09 ma... 40 8.5
39emb|BX322650.2| Human DNA sequence from clone RP11-49C9 on chrom... 40 8.5
40emb|BX927209.6| Human DNA sequence from clone WI2-81066F1 on chr... 40 8.5
41emb|AL139347.10| Human DNA sequence from clone RP5-871P9 on chro... 40 8.5
42gb|AC024935.34| Homo sapiens 12 BAC RP11-471G7 (Roswell Park Can... 40 8.5
43gb|AC111280.7| Rattus norvegicus 13 BAC CH230-51N9 (Children's H... 40 8.5
44emb|AL645685.12| Mouse DNA sequence from clone RP23-198I4 on chr... 40 8.5
45gb|AC022239.16| Homo sapiens chromosome 8, clone RP11-148O21, co... 40 8.5
46gb|AC134399.12| Mus musculus chromosome 5, clone RP24-282I19, co... 40 8.5
47gb|AF286884.4| Homo sapiens chromosome 8 clone RP11-597D18 map 8... 40 8.5
48gb|AC098964.4| Homo sapiens chromosome 8 clone RP11-141M14 map 8... 40 8.5
49gb|AC103840.2| Homo sapiens chromosome 8, clone RP11-317N12, com... 40 8.5
50gb|AC087671.9| Homo sapiens chromosome 8, clone RP11-597D18, com... 40 8.5
51emb|BX323987.12| Zebrafish DNA sequence from clone DKEY-125E8, c... 40 8.5
52dbj|AK052121.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 40 8.5
53gb|AC019216.9|AC019216 Homo sapiens BAC clone RP11-484N11 from 4... 40 8.5
54ref|XM_623758.1| PREDICTED: Apis mellifera similar to archvillin... 40 8.5
55gb|AC127679.3| Mus musculus chromosome UL clone RP24-395N24, com... 40 8.5
56gb|U66083.1|HSU66083 Human contig of two cosmids from LLNL X chr... 40 8.5
57gb|AC009264.6|AC009264 Homo sapiens chromosome 7 clone RP11-271F... 40 8.5
58gb|AC012486.9| Homo sapiens BAC clone RP11-84A12 from 2, complet... 40 8.5
59gb|AC009332.6|AC009332 Homo sapiens chromosome 7 clone RP11-348O... 40 8.5
60dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 8.5
61gb|AC157891.3| Medicago truncatula chromosome 7 BAC clone mte1-1... 40 8.5
62emb|BX539333.2| Mouse DNA sequence from clone RP23-138J24 on chr... 40 8.5
63gb|AC114424.10| Mus musculus chromosome 3, clone RP24-84L9, comp... 40 8.5
64emb|CR450687.16| Zebrafish DNA sequence from clone CH211-204A13 ... 40 8.5
65gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 8.5
66gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 8.5 
>gb|AY052154.1| Triticum aestivum porphobilinogen deaminase mRNA, partial cds
          Length = 1220

 Score =  874 bits (441), Expect = 0.0
 Identities = 575/618 (93%), Gaps = 4/618 (0%)
 Strand = Plus / Minus

                                                                        
Query: 5    actgcgagcagaagcctcttccagaactcgatgaaaatn-aaggataacaaaccactgaa 63
            ||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||| ||
Sbjct: 1132 actgcaagcagaagcctcttccagaactcgatgaaaatcgaaggataacaaaccactaaa 1073

                                                                        
Query: 64   ccgtgttctaaattctaacccgcagcgctaaaaagacagaaatacaaatttaagtggtac 123
            ||||||||||| ||||||||||||| || ||||| ||||| |||||||||| | ||||||
Sbjct: 1072 ccgtgttctaagttctaacccgcagagccaaaaaaacagagatacaaatttgattggtac 1013

                                                                        
Query: 124  agctcaatatgtggtacaaaattctatcataactacaagaagatggtaaaaaacaaaatc 183
            |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||   ||| 
Sbjct: 1012 agctcaatatgtagtacaaacttctatcataactacgagaagatggtaaaaaa---aatg 956

                                                                        
Query: 184  aacactatcagagcgtggtggatattctattgcaagccatcgaagaaaccaggtccagcc 243
            ||| |||| || || ||| |||| | |||||| ||||||||||||||||||||||| |||
Sbjct: 955  aacgctattagggcatggcggatttcctattgtaagccatcgaagaaaccaggtccggcc 896

                                                                        
Query: 244  tttgatttcagttcgtggccggcatcttggcctatcgcgaccatgtcatcaaaagaatat 303
            ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||
Sbjct: 895  tttgatttcagttcgtggccggcgtcttgacctaacgcgaccatgtcatcaaaagaatat 836

                                                                        
Query: 304  gttccacttcttgatgtctcgtatactatagagccatctggtgaagccaatagcccccgg 363
            |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835  gttccactccttgacgtctcgtatactatagagccatctggtgaagccaatagcccccgg 776

                                                                        
Query: 364  aatgaacagttcccatccttgtcacgataagcatatgccgcaattggagttcgacagtta 423
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 775  aatgagcagttcccatccttgtcacgataagcatatgccgcaattggagttcggcagtta 716

                                                                        
Query: 424  ccatcaagaacagacaagaattctctttcacatgcaacagctaatctggtatcttcatga 483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715  ccatcaagaacagacaagaattctctttcacatgcaacagctaatctggtatcttcatga 656

                                                                        
Query: 484  ttcaaagaggatagatactccatcattttatcatcattgctcctgcaagctattccaata 543
            ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 655  ttcaaagaggacagatactccatcattttatcatcattgctcctgcaagttattccaata 596

                                                                        
Query: 544  gcgccttgagcaactgctggaagcatttcatctactgacaatacagatgttgcagtttcc 603
            ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| 
Sbjct: 595  gcgccttgagcgactgctggaagcatttcgtctactgataatacagatgttgcagtttct 536

                              
Query: 604  gccatgtgtaaccgtttt 621
            | ||||  ||||||||||
Sbjct: 535  ggcatgcctaaccgtttt 518
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>ref|XM_464263.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1466

 Score =  416 bits (210), Expect = e-113
 Identities = 360/410 (87%)
 Strand = Plus / Minus

                                                                        
Query: 212  attgcaagccatcgaagaaaccaggtccagcctttgatttcagttcgtggccggcatctt 271
            ||||||||| ||| ||||| ||||| |||||||||| |||||| |||||||| |||||||
Sbjct: 1156 attgcaagctatcaaagaagccagggccagcctttgctttcagctcgtggccagcatctt 1097

                                                                        
Query: 272  ggcctatcgcgaccatgtcatcaaaagaatatgttccacttcttgatgtctcgtatacta 331
              || ||| | ||||||  ||| |||  ||| | |||| |||| || ||||| |||||| 
Sbjct: 1096 tacccatctcaaccatgatatcgaaatcataaggtccagttctcgaagtctcatatactg 1037

                                                                        
Query: 332  tagagccatctggtgaagccaatagcccccggaatgaacagttcccatccttgtcacgat 391
            |||| ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| 
Sbjct: 1036 tagatccatcaggtgaagccaatagccctcggaatgaacaattcccatccttgtcacgag 977

                                                                        
Query: 392  aagcatatgccgcaattggagttcgacagttaccatcaagaacagacaagaattctcttt 451
            ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 976  aagcatatgccgcaattggagttcggcagttgccatcaagaactgacaagaattctcttt 917

                                                                        
Query: 452  cacatgcaacagctaatctggtatcttcatgattcaaagaggatagatactccatcattt 511
            ||||||||||||||||||||||||||||||| ||||| ||||| |  || | ||||||| 
Sbjct: 916  cacatgcaacagctaatctggtatcttcatggttcaatgaggacaagtaattcatcattg 857

                                                                        
Query: 512  tatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaagcattt 571
            | |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 856  tgtcatcactgcttctgcaagctattccaatagcaccttgagcaactgctggaagcattt 797

                                                              
Query: 572  catctactgacaatacagatgttgcagtttccgccatgtgtaaccgtttt 621
            | || ||||||||||||||||| |||||||| ||||||| ||| ||||||
Sbjct: 796  cgtccactgacaatacagatgtcgcagtttctgccatgtttaagcgtttt 747
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>ref|XM_464262.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1416

 Score =  416 bits (210), Expect = e-113
 Identities = 360/410 (87%)
 Strand = Plus / Minus

                                                                        
Query: 212  attgcaagccatcgaagaaaccaggtccagcctttgatttcagttcgtggccggcatctt 271
            ||||||||| ||| ||||| ||||| |||||||||| |||||| |||||||| |||||||
Sbjct: 1123 attgcaagctatcaaagaagccagggccagcctttgctttcagctcgtggccagcatctt 1064

                                                                        
Query: 272  ggcctatcgcgaccatgtcatcaaaagaatatgttccacttcttgatgtctcgtatacta 331
              || ||| | ||||||  ||| |||  ||| | |||| |||| || ||||| |||||| 
Sbjct: 1063 tacccatctcaaccatgatatcgaaatcataaggtccagttctcgaagtctcatatactg 1004

                                                                        
Query: 332  tagagccatctggtgaagccaatagcccccggaatgaacagttcccatccttgtcacgat 391
            |||| ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| 
Sbjct: 1003 tagatccatcaggtgaagccaatagccctcggaatgaacaattcccatccttgtcacgag 944

                                                                        
Query: 392  aagcatatgccgcaattggagttcgacagttaccatcaagaacagacaagaattctcttt 451
            ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 943  aagcatatgccgcaattggagttcggcagttgccatcaagaactgacaagaattctcttt 884

                                                                        
Query: 452  cacatgcaacagctaatctggtatcttcatgattcaaagaggatagatactccatcattt 511
            ||||||||||||||||||||||||||||||| ||||| ||||| |  || | ||||||| 
Sbjct: 883  cacatgcaacagctaatctggtatcttcatggttcaatgaggacaagtaattcatcattg 824

                                                                        
Query: 512  tatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaagcattt 571
            | |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 823  tgtcatcactgcttctgcaagctattccaatagcaccttgagcaactgctggaagcattt 764

                                                              
Query: 572  catctactgacaatacagatgttgcagtttccgccatgtgtaaccgtttt 621
            | || ||||||||||||||||| |||||||| ||||||| ||| ||||||
Sbjct: 763  cgtccactgacaatacagatgtcgcagtttctgccatgtttaagcgtttt 714
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>dbj|AK102265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088M20, full
            insert sequence
          Length = 1466

 Score =  416 bits (210), Expect = e-113
 Identities = 360/410 (87%)
 Strand = Plus / Minus

                                                                        
Query: 212  attgcaagccatcgaagaaaccaggtccagcctttgatttcagttcgtggccggcatctt 271
            ||||||||| ||| ||||| ||||| |||||||||| |||||| |||||||| |||||||
Sbjct: 1156 attgcaagctatcaaagaagccagggccagcctttgctttcagctcgtggccagcatctt 1097

                                                                        
Query: 272  ggcctatcgcgaccatgtcatcaaaagaatatgttccacttcttgatgtctcgtatacta 331
              || ||| | ||||||  ||| |||  ||| | |||| |||| || ||||| |||||| 
Sbjct: 1096 tacccatctcaaccatgatatcgaaatcataaggtccagttctcgaagtctcatatactg 1037

                                                                        
Query: 332  tagagccatctggtgaagccaatagcccccggaatgaacagttcccatccttgtcacgat 391
            |||| ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| 
Sbjct: 1036 tagatccatcaggtgaagccaatagccctcggaatgaacaattcccatccttgtcacgag 977

                                                                        
Query: 392  aagcatatgccgcaattggagttcgacagttaccatcaagaacagacaagaattctcttt 451
            ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 976  aagcatatgccgcaattggagttcggcagttgccatcaagaactgacaagaattctcttt 917

                                                                        
Query: 452  cacatgcaacagctaatctggtatcttcatgattcaaagaggatagatactccatcattt 511
            ||||||||||||||||||||||||||||||| ||||| ||||| |  || | ||||||| 
Sbjct: 916  cacatgcaacagctaatctggtatcttcatggttcaatgaggacaagtaattcatcattg 857

                                                                        
Query: 512  tatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaagcattt 571
            | |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 856  tgtcatcactgcttctgcaagctattccaatagcaccttgagcaactgctggaagcattt 797

                                                              
Query: 572  catctactgacaatacagatgttgcagtttccgccatgtgtaaccgtttt 621
            | || ||||||||||||||||| |||||||| ||||||| ||| ||||||
Sbjct: 796  cgtccactgacaatacagatgtcgcagtttctgccatgtttaagcgtttt 747
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>dbj|AK060914.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G03, full
            insert sequence
          Length = 1416

 Score =  416 bits (210), Expect = e-113
 Identities = 360/410 (87%)
 Strand = Plus / Minus

                                                                        
Query: 212  attgcaagccatcgaagaaaccaggtccagcctttgatttcagttcgtggccggcatctt 271
            ||||||||| ||| ||||| ||||| |||||||||| |||||| |||||||| |||||||
Sbjct: 1123 attgcaagctatcaaagaagccagggccagcctttgctttcagctcgtggccagcatctt 1064

                                                                        
Query: 272  ggcctatcgcgaccatgtcatcaaaagaatatgttccacttcttgatgtctcgtatacta 331
              || ||| | ||||||  ||| |||  ||| | |||| |||| || ||||| |||||| 
Sbjct: 1063 tacccatctcaaccatgatatcgaaatcataaggtccagttctcgaagtctcatatactg 1004

                                                                        
Query: 332  tagagccatctggtgaagccaatagcccccggaatgaacagttcccatccttgtcacgat 391
            |||| ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| 
Sbjct: 1003 tagatccatcaggtgaagccaatagccctcggaatgaacaattcccatccttgtcacgag 944

                                                                        
Query: 392  aagcatatgccgcaattggagttcgacagttaccatcaagaacagacaagaattctcttt 451
            ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 943  aagcatatgccgcaattggagttcggcagttgccatcaagaactgacaagaattctcttt 884

                                                                        
Query: 452  cacatgcaacagctaatctggtatcttcatgattcaaagaggatagatactccatcattt 511
            ||||||||||||||||||||||||||||||| ||||| ||||| |  || | ||||||| 
Sbjct: 883  cacatgcaacagctaatctggtatcttcatggttcaatgaggacaagtaattcatcattg 824

                                                                        
Query: 512  tatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaagcattt 571
            | |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 823  tgtcatcactgcttctgcaagctattccaatagcaccttgagcaactgctggaagcattt 764

                                                              
Query: 572  catctactgacaatacagatgttgcagtttccgccatgtgtaaccgtttt 621
            | || ||||||||||||||||| |||||||| ||||||| ||| ||||||
Sbjct: 763  cgtccactgacaatacagatgtcgcagtttctgccatgtttaagcgtttt 714
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>gb|AY107718.1| Zea mays PCO070684 mRNA sequence
          Length = 1003

 Score =  359 bits (181), Expect = 7e-96
 Identities = 343/397 (86%)
 Strand = Plus / Minus

                                                                       
Query: 212 attgcaagccatcgaagaaaccaggtccagcctttgatttcagttcgtggccggcatctt 271
           ||||||||| ||| ||||| ||||| ||||||||||  ||||| || || || |||||||
Sbjct: 728 attgcaagctatcaaagaatccaggcccagcctttgccttcagctcatgaccagcatctt 669

                                                                       
Query: 272 ggcctatcgcgaccatgtcatcaaaagaatatgttccacttcttgatgtctcgtatacta 331
            ||| ||| | |||||||| |||||||| || | ||||||||||| ||||||  ||||| 
Sbjct: 668 tgcccatctcaaccatgtcgtcaaaagagtacggtccacttcttgttgtctcaaatactt 609

                                                                       
Query: 332 tagagccatctggtgaagccaatagcccccggaatgaacagttcccatccttgtcacgat 391
           |||| |||||||| |||| |||||| || |||||||| || |||||||| |||||||| |
Sbjct: 608 tagatccatctggggaagacaatagaccgcggaatgagcaattcccatcattgtcacggt 549

                                                                       
Query: 392 aagcatatgccgcaattggagttcgacagttaccatcaagaacagacaagaattctcttt 451
           ||||||| || |||||||||||||| ||||||||||||||||| | ||| ||||||||||
Sbjct: 548 aagcataggctgcaattggagttcggcagttaccatcaagaactgccaaaaattctcttt 489

                                                                       
Query: 452 cacatgcaacagctaatctggtatcttcatgattcaaagaggatagatactccatcattt 511
           ||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||||||
Sbjct: 488 cacatgcaacagctaatctggtatcttcatggttcaacgctgatagatactccatcattt 429

                                                                       
Query: 512 tatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaagcattt 571
           | ||||||||||| | |||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 428 tgtcatcattgcttcggcaagctattccaatagcaccttgggcaactgctggaagcattt 369

                                                
Query: 572 catctactgacaatacagatgttgcagtttccgccat 608
           | || ||||| | |||||  |||||| |||| |||||
Sbjct: 368 cttccactgatagtacagcagttgcattttctgccat 332
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>emb|Y12809.1|ZMY12809 Zea mays mRNA for putative porphobilinogen deaminase
          Length = 865

 Score =  327 bits (165), Expect = 3e-86
 Identities = 340/397 (85%), Gaps = 1/397 (0%)
 Strand = Plus / Plus

                                                                       
Query: 212 attgcaagccatcgaagaaaccaggtccagcctttgatttcagttcgtggccggcatctt 271
           ||||| ||| ||| ||||| ||||| ||||||||||  |||||||| || || |||||||
Sbjct: 227 attgcgagctatcaaagaatccaggcccagcctttgccttcagttcatgaccagcatctt 286

                                                                       
Query: 272 ggcctatcgcgaccatgtcatcaaaagaatatgttccacttcttgatgtctcgtatacta 331
            ||| ||| | |||||||| |||||||| || | ||||||||| | ||||||  ||||| 
Sbjct: 287 tgcccatctcaaccatgtcgtcaaaagagtacggtccacttctcgttgtctcaaatactt 346

                                                                       
Query: 332 tagagccatctggtgaagccaatagcccccggaatgaacagttcccatccttgtcacgat 391
           |||| |||||||| |||| |||||| || |||||||| || |||||||| |||||||| |
Sbjct: 347 tagatccatctggggaagacaatagaccgcggaatgagcaattcccatcattgtcacggt 406

                                                                       
Query: 392 aagcatatgccgcaattggagttcgacagttaccatcaagaacagacaagaattctcttt 451
           ||||||| || |||||||||||||| ||||||||||||||||| | ||| ||||||||||
Sbjct: 407 aagcataggctgcaattggagttcggcagttaccatcaagaactgccaa-aattctcttt 465

                                                                       
Query: 452 cacatgcaacagctaatctggtatcttcatgattcaaagaggatagatactccatcattt 511
           ||||||||||||||||| ||||||||||||| ||||| |  |||||||||||||||||||
Sbjct: 466 cacatgcaacagctaatgtggtatcttcatggttcaacgctgatagatactccatcattt 525

                                                                       
Query: 512 tatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaagcattt 571
           | ||||||||||| | ||||| |||||||||||| ||||| |||||||||||||||||||
Sbjct: 526 tgtcatcattgcttcggcaaggtattccaatagcaccttgggcaactgctggaagcattt 585

                                                
Query: 572 catctactgacaatacagatgttgcagtttccgccat 608
           | || ||||| | |||||  |||||| |||| |||||
Sbjct: 586 cttccactgatagtacagcagttgcattttctgccat 622
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>gb|AY105442.1| Zea mays PCO070685 mRNA sequence
          Length = 1591

 Score =  307 bits (155), Expect = 2e-80
 Identities = 329/387 (85%)
 Strand = Plus / Minus

                                                                        
Query: 222  atcgaagaaaccaggtccagcctttgatttcagttcgtggccggcatcttggcctatcgc 281
            ||||||||| ||||| |||||||| |  ||||| |||||||| || |||| ||| ||| |
Sbjct: 1173 atcgaagaagccaggcccagccttcgccttcagctcgtggccagcgtctttgcccatctc 1114

                                                                        
Query: 282  gaccatgtcatcaaaagaatatgttccacttcttgatgtctcgtatactatagagccatc 341
            ||||||||| || ||||| || | |||||||||||  |||||  ||||| |||| || ||
Sbjct: 1113 gaccatgtcgtcgaaagagtacggtccacttcttgccgtctcaaatactttagatccgtc 1054

                                                                        
Query: 342  tggtgaagccaatagcccccggaatgaacagttcccatccttgtcacgataagcatatgc 401
            |||||||| || ||| ||||||||||| |||||||| ||||||||||| |||||||| ||
Sbjct: 1053 tggtgaagacagtaggccccggaatgagcagttcccgtccttgtcacggtaagcataggc 994

                                                                        
Query: 402  cgcaattggagttcgacagttaccatcaagaacagacaagaattctctttcacatgcaac 461
            ||||||||||||||| ||||| ||||||||||| | ||||||||||||||| ||||  ||
Sbjct: 993  cgcaattggagttcggcagttgccatcaagaactgccaagaattctctttcgcatgtgac 934

                                                                        
Query: 462  agctaatctggtatcttcatgattcaaagaggatagatactccatcattttatcatcatt 521
            ||||| ||||||||| || || ||||| ||||| ||||||||||||||||| ||||| ||
Sbjct: 933  agctagtctggtatcctcgtggttcaacgaggacagatactccatcattttgtcatcgtt 874

                                                                        
Query: 522  gctcctgcaagctattccaatagcgccttgagcaactgctggaagcatttcatctactga 581
            ||| | |||||| ||||||||||| ||||| |||||||| ||||||||||| || |||||
Sbjct: 873  gcttcggcaagcgattccaatagcaccttgggcaactgccggaagcatttcttccactga 814

                                       
Query: 582  caatacagatgttgcagtttccgccat 608
             | ||||| ||||||| |||| |||||
Sbjct: 813  tagtacagctgttgcattttctgccat 787
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  244 bits (123), Expect = 3e-61
 Identities = 153/163 (93%)
 Strand = Plus / Minus

                                                                           
Query: 332     tagagccatctggtgaagccaatagcccccggaatgaacagttcccatccttgtcacgat 391
               |||| ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| 
Sbjct: 3717726 tagatccatcaggtgaagccaatagccctcggaatgaacaattcccatccttgtcacgag 3717667

                                                                           
Query: 392     aagcatatgccgcaattggagttcgacagttaccatcaagaacagacaagaattctcttt 451
               ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 3717666 aagcatatgccgcaattggagttcggcagttgccatcaagaactgacaagaattctcttt 3717607

                                                          
Query: 452     cacatgcaacagctaatctggtatcttcatgattcaaagagga 494
               ||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 3717606 cacatgcaacagctaatctggtatcttcatggttcaatgagga 3717564



 Score =  143 bits (72), Expect = 8e-31
 Identities = 99/108 (91%)
 Strand = Plus / Minus

                                                                           
Query: 514     tcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaagcatttca 573
               |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 3717078 tcatcactgcttctgcaagctattccaatagcaccttgagcaactgctggaagcatttcg 3717019

                                                               
Query: 574     tctactgacaatacagatgttgcagtttccgccatgtgtaaccgtttt 621
               || ||||||||||||||||| |||||||| ||||||| ||| ||||||
Sbjct: 3717018 tccactgacaatacagatgtcgcagtttctgccatgtttaagcgtttt 3716971
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>dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0669G09
          Length = 140067

 Score =  244 bits (123), Expect = 3e-61
 Identities = 153/163 (93%)
 Strand = Plus / Minus

                                                                         
Query: 332   tagagccatctggtgaagccaatagcccccggaatgaacagttcccatccttgtcacgat 391
             |||| ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| 
Sbjct: 58043 tagatccatcaggtgaagccaatagccctcggaatgaacaattcccatccttgtcacgag 57984

                                                                         
Query: 392   aagcatatgccgcaattggagttcgacagttaccatcaagaacagacaagaattctcttt 451
             ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 57983 aagcatatgccgcaattggagttcggcagttgccatcaagaactgacaagaattctcttt 57924

                                                        
Query: 452   cacatgcaacagctaatctggtatcttcatgattcaaagagga 494
             ||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 57923 cacatgcaacagctaatctggtatcttcatggttcaatgagga 57881



 Score =  143 bits (72), Expect = 8e-31
 Identities = 99/108 (91%)
 Strand = Plus / Minus

                                                                         
Query: 514   tcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaagcatttca 573
             |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 57395 tcatcactgcttctgcaagctattccaatagcaccttgagcaactgctggaagcatttcg 57336

                                                             
Query: 574   tctactgacaatacagatgttgcagtttccgccatgtgtaaccgtttt 621
             || ||||||||||||||||| |||||||| ||||||| ||| ||||||
Sbjct: 57335 tccactgacaatacagatgtcgcagtttctgccatgtttaagcgtttt 57288
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>gb|AC146562.17| Medicago truncatula clone mth2-14d10, complete sequence
          Length = 118505

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                         
Query: 507   cattttatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaag 566
             |||||||||||||||||| || || ||||||||||| || ||||| ||||| ||||||||
Sbjct: 77702 cattttatcatcattgcttctacaggctattccaattgcaccttgcgcaacagctggaag 77643

                      
Query: 567   catttcatc 575
             ||| |||||
Sbjct: 77642 catatcatc 77634
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>ref|NM_120911.2| Arabidopsis thaliana hydroxymethylbilane synthase AT5G08280 mRNA,
            complete cds
          Length = 1918

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 507  cattttatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaag 566
            ||||||||||||||   | || || || ||||||||||| ||||||||||| ||||||||
Sbjct: 1054 cattttatcatcatcagttctacaggcaattccaatagctccttgagcaacagctggaag 995

                     
Query: 567  catttcatc 575
            |||||||||
Sbjct: 994  catttcatc 986
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>gb|AY123037.1| Arabidopsis thaliana putative hydroxymethylbilane synthase
           (At5g08280) mRNA, complete cds
          Length = 1180

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 507 cattttatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaag 566
           ||||||||||||||   | || || || ||||||||||| ||||||||||| ||||||||
Sbjct: 858 cattttatcatcatcagttctacaggcaattccaatagctccttgagcaacagctggaag 799

                    
Query: 567 catttcatc 575
           |||||||||
Sbjct: 798 catttcatc 790
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>emb|X73535.1|ATHEMC A.thaliana gene for porphobilinogen deaminase
          Length = 3602

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 507  cattttatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaag 566
            ||||||||||||||   | || || || ||||||||||| ||||||||||| ||||||||
Sbjct: 2921 cattttatcatcatcagttctacaggcaattccaatagctccttgagcaacagctggaag 2862

                     
Query: 567  catttcatc 575
            |||||||||
Sbjct: 2861 catttcatc 2853
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>emb|X73839.1|ATHEM A.thaliana gene for hemC
          Length = 3422

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 507  cattttatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaag 566
            ||||||||||||||   | || || || ||||||||||| ||||||||||| ||||||||
Sbjct: 2921 cattttatcatcatcagttctacaggcaattccaatagctccttgagcaacagctggaag 2862

                     
Query: 567  catttcatc 575
            |||||||||
Sbjct: 2861 catttcatc 2853
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>gb|AY070431.1| Arabidopsis thaliana putative hydroxymethylbilane synthase
           (At5g08280) mRNA, complete cds
          Length = 1468

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 507 cattttatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaag 566
           ||||||||||||||   | || || || ||||||||||| ||||||||||| ||||||||
Sbjct: 957 cattttatcatcatcagttctacaggcaattccaatagctccttgagcaacagctggaag 898

                    
Query: 567 catttcatc 575
           |||||||||
Sbjct: 897 catttcatc 889
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>emb|AL392174.1|ATF8L15 Arabidopsis thaliana DNA chromosome 5, BAC clone F8L15 (ESSA project)
          Length = 125411

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                         
Query: 507   cattttatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaag 566
             ||||||||||||||   | || || || ||||||||||| ||||||||||| ||||||||
Sbjct: 28082 cattttatcatcatcagttctacaggcaattccaatagctccttgagcaacagctggaag 28141

                      
Query: 567   catttcatc 575
             |||||||||
Sbjct: 28142 catttcatc 28150
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>gb|AF419614.1|AF419614 Arabidopsis thaliana AT5g08280/F8L15_10 mRNA, complete cds
          Length = 1468

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 507 cattttatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaag 566
           ||||||||||||||   | || || || ||||||||||| ||||||||||| ||||||||
Sbjct: 988 cattttatcatcatcagttctacaggcaattccaatagctccttgagcaacagctggaag 929

                    
Query: 567 catttcatc 575
           |||||||||
Sbjct: 928 catttcatc 920
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>dbj|AK220878.1| Arabidopsis thaliana mRNA for hydroxymethylbilane synthase,
           complete cds, clone: RAFL22-43-C01
          Length = 641

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 507 cattttatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaag 566
           ||||||||||||||   | || || || ||||||||||| ||||||||||| ||||||||
Sbjct: 142 cattttatcatcatcagttctacaggcaattccaatagctccttgagcaacagctggaag 83

                    
Query: 567 catttcatc 575
           |||||||||
Sbjct: 82  catttcatc 74
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>emb|BX832351.1|CNS0A0WZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH67ZB06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1362

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 507 cattttatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaag 566
           ||||||||||||||   | || || || ||||||||||| ||||||||||| ||||||||
Sbjct: 911 cattttatcatcatcagttctacaggcaattccaatagctccttgagcaacagctggaag 852

                    
Query: 567 catttcatc 575
           |||||||||
Sbjct: 851 catttcatc 843
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>emb|BX831339.1|CNS0A0OW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS7ZC07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1419

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 507 cattttatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaag 566
           ||||||||||||||   | || || || ||||||||||| ||||||||||| ||||||||
Sbjct: 953 cattttatcatcatcagttctacaggcaattccaatagctccttgagcaacagctggaag 894

                    
Query: 567 catttcatc 575
           |||||||||
Sbjct: 893 catttcatc 885
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>emb|BX830739.1|CNS0A0NT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS19ZD04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1406

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 507 cattttatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaag 566
           ||||||||||||||   | || || || ||||||||||| ||||||||||| ||||||||
Sbjct: 949 cattttatcatcatcagttctacaggcaattccaatagctccttgagcaacagctggaag 890

                    
Query: 567 catttcatc 575
           |||||||||
Sbjct: 889 catttcatc 881
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>gb|AY087012.1| Arabidopsis thaliana clone 3051 mRNA, complete sequence
          Length = 1501

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 507  cattttatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaag 566
            ||||||||||||||   | || || || ||||||||||| ||||||||||| ||||||||
Sbjct: 1054 cattttatcatcatcagttctacaggcaattccaatagctccttgagcaacagctggaag 995

                     
Query: 567  catttcatc 575
            |||||||||
Sbjct: 994  catttcatc 986
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>emb|X73418.1|PSHEMCA P.sativum hemC mRNA for hydroxymethylbilane synthase
          Length = 1856

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                       
Query: 507 cattttatcatcattgctcctgcaagctattccaatagcgccttgagcaactgctggaag 566
           ||||||||||||||| || || || ||||||||||| || ||||| ||||| || |||||
Sbjct: 984 cattttatcatcattacttctacaggctattccaattgcaccttgggcaacagcgggaag 925

                    
Query: 567 catttcatc 575
           ||| |||||
Sbjct: 924 catatcatc 916
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>dbj|AB050116.1| Amaranthus tricolor PBGD mRNA for porphobilinogen deaminase,
           partial cds
          Length = 593

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 529 caagctattccaatagcgccttgagcaactgctggaagcatttcatc 575
           ||||| |||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 458 caagcgattccaatggccccttgagcaacagctggaagcatatcatc 412
to top
>gb|DQ121376.1| Uncultured bacterium clone YC01G10, partial sequence
          Length = 44241

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 165  gatggtaaaaaacaaaatcaacactat 191
            |||||||||||||||||||| ||||||
Sbjct: 3684 gatggtaaaaaacaaaatcatcactat 3658
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>gb|AC133600.2| Mus musculus BAC clone RP24-399N24 from chromosome 3, complete sequence
          Length = 197428

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 171   aaaaaacaaaatcaacactatc 192
             ||||||||||||||||||||||
Sbjct: 61952 aaaaaacaaaatcaacactatc 61973
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 543     agcgccttgagcaactgctgg 563
               |||||||||||||||||||||
Sbjct: 2923006 agcgccttgagcaactgctgg 2923026
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>emb|AL109964.20|HS1118M15 Human DNA sequence from clone RP5-1118M15 on chromosome 20 Contains the
             3' end of the CTNNBL1 gene for catenin beta like 1, the
             C20orf102 gene for a novel Immunoglobulin
             domain-containing protein and a CpG Island, complete
             sequence
          Length = 95851

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                          
Query: 362   ggaatgaacagttcccatccttgtcacga 390
             |||||||||||| ||||||||||||||||
Sbjct: 25486 ggaatgaacagt-cccatccttgtcacga 25513
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>emb|AL928922.7| Mouse DNA sequence from clone RP23-431J22 on chromosome 2, complete
            sequence
          Length = 203047

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 100  cagaaatacaaatttaagtggtaca 124
            ||||||||| |||||||||||||||
Sbjct: 3715 cagaaataccaatttaagtggtaca 3739
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>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 168     ggtaaaaaacaaaatcaaca 187
               ||||||||||||||||||||
Sbjct: 1012548 ggtaaaaaacaaaatcaaca 1012529
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>gb|AC118802.7| Rattus norvegicus 13 BAC CH230-72B9 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 239935

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    agaaatacaaatttaagtgg 120
              ||||||||||||||||||||
Sbjct: 147813 agaaatacaaatttaagtgg 147794
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>gb|AC163995.4| Mus musculus chromosome 5, clone RP24-242C19, complete sequence
          Length = 177877

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     cagaagcctcttccagaact 32
              ||||||||||||||||||||
Sbjct: 117359 cagaagcctcttccagaact 117340
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>gb|AC116551.2| Dictyostelium discoideum chromosome 2 map complement(581327-427576)
             strain AX4, complete sequence
          Length = 153751

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   taaaaaacaaaatcaacact 189
             ||||||||||||||||||||
Sbjct: 98060 taaaaaacaaaatcaacact 98041
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>gb|AF131216.2| Homo sapiens chromosome 8 map 8p23-p22 clone CTB-164D9, CTB-169o5,
              CTB-65D4, CTC-271o23, CTC-367J24, complete sequence; and
              clones CTC-493P15, CTB-91N18, partial sequence
          Length = 321261

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 555    aactgctggaagcatttcat 574
              ||||||||||||||||||||
Sbjct: 277036 aactgctggaagcatttcat 277055
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>gb|AC124555.4| Mus musculus BAC clone RP23-245K17 from chromosome 14, complete sequence
          Length = 210174

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    taaaaaacaaaatcaacact 189
              ||||||||||||||||||||
Sbjct: 153733 taaaaaacaaaatcaacact 153752
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>emb|CR626884.13| Zebrafish DNA sequence from clone DKEY-83H2 in linkage group 15,
             complete sequence
          Length = 207732

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 424   ccatcaagaacagacaagaa 443
             ||||||||||||||||||||
Sbjct: 81805 ccatcaagaacagacaagaa 81824
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>emb|CT025638.1| Pan troglodytes chromosome X clone PTB-083N09 map Xq28, complete sequence
          Length = 189430

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 524    tcctgcaagctattccaata 543
              ||||||||||||||||||||
Sbjct: 169433 tcctgcaagctattccaata 169452
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>emb|BX322650.2| Human DNA sequence from clone RP11-49C9 on chromosome X Contains
           the 3' end of a novel gene and a novel pseudogene,
           complete sequence
          Length = 181175

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 524 tcctgcaagctattccaata 543
           ||||||||||||||||||||
Sbjct: 138 tcctgcaagctattccaata 119
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>emb|BX927209.6| Human DNA sequence from clone WI2-81066F1 on chromosome X Contains the
             5' end of a novel gene, a novel gene, the gene for a novel
             protein and a CpG island, complete sequence
          Length = 32107

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   tcctgcaagctattccaata 543
             ||||||||||||||||||||
Sbjct: 30245 tcctgcaagctattccaata 30226
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>emb|AL139347.10| Human DNA sequence from clone RP5-871P9 on chromosome 1p21.2-22.1
             Contains a NADH dehydrogenase (ubiquinone) Fe-S protein 5
             (15kDa (NADH-coenzyme Q reductase) (NDUFS5)) pseudogene,
             complete sequence
          Length = 74010

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 324   gtatactatagagccatctggtga 347
             ||||||| ||||||||||||||||
Sbjct: 16553 gtatactctagagccatctggtga 16576
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>gb|AC024935.34| Homo sapiens 12 BAC RP11-471G7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 102102

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    agaagcctcttccagaactc 33
             ||||||||||||||||||||
Sbjct: 50963 agaagcctcttccagaactc 50944
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>gb|AC111280.7| Rattus norvegicus 13 BAC CH230-51N9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 216192

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   agaaatacaaatttaagtgg 120
             ||||||||||||||||||||
Sbjct: 34425 agaaatacaaatttaagtgg 34406
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>emb|AL645685.12| Mouse DNA sequence from clone RP23-198I4 on chromosome 1 Contains a
              ribosomal protein S13 (Rps13) pseudogene, a ribosomal
              protein S27 (Rps27) pseudogene a novel genes and the 3' end
              of a novel gene, complete sequence
          Length = 218950

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 325    tatactatagagccatctggtgaa 348
              ||||||||||||||| ||||||||
Sbjct: 150493 tatactatagagccaactggtgaa 150470
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>gb|AC022239.16| Homo sapiens chromosome 8, clone RP11-148O21, complete sequence
          Length = 191630

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 555   aactgctggaagcatttcat 574
             ||||||||||||||||||||
Sbjct: 20183 aactgctggaagcatttcat 20202
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>gb|AC134399.12| Mus musculus chromosome 5, clone RP24-282I19, complete sequence
          Length = 155228

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    cagaagcctcttccagaact 32
             ||||||||||||||||||||
Sbjct: 78013 cagaagcctcttccagaact 78032
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>gb|AF286884.4| Homo sapiens chromosome 8 clone RP11-597D18 map 8p21-p11, complete
            sequence
          Length = 207519

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 166  atggtaaaaaacaaaatcaa 185
            ||||||||||||||||||||
Sbjct: 1183 atggtaaaaaacaaaatcaa 1202
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>gb|AC098964.4| Homo sapiens chromosome 8 clone RP11-141M14 map 8p21-p11, complete
              sequence
          Length = 151646

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    atggtaaaaaacaaaatcaa 185
              ||||||||||||||||||||
Sbjct: 116109 atggtaaaaaacaaaatcaa 116128
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>gb|AC103840.2| Homo sapiens chromosome 8, clone RP11-317N12, complete sequence
          Length = 172361

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   atggtaaaaaacaaaatcaa 185
             ||||||||||||||||||||
Sbjct: 58701 atggtaaaaaacaaaatcaa 58720
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>gb|AC087671.9| Homo sapiens chromosome 8, clone RP11-597D18, complete sequence
          Length = 207503

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    atggtaaaaaacaaaatcaa 185
              ||||||||||||||||||||
Sbjct: 206320 atggtaaaaaacaaaatcaa 206301
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>emb|BX323987.12| Zebrafish DNA sequence from clone DKEY-125E8, complete sequence
          Length = 164299

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   aaaacaaaatcaacactatc 192
             ||||||||||||||||||||
Sbjct: 94041 aaaacaaaatcaacactatc 94060
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>dbj|AK052121.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
           enriched library, clone:D230048G05
           product:unclassifiable, full insert sequence
          Length = 2835

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 501 ctccatcattttatcatcat 520
           ||||||||||||||||||||
Sbjct: 81  ctccatcattttatcatcat 62
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>gb|AC019216.9|AC019216 Homo sapiens BAC clone RP11-484N11 from 4, complete sequence
          Length = 160858

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     aaagacagaaatacaaattt 114
              ||||||||||||||||||||
Sbjct: 119341 aaagacagaaatacaaattt 119360
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>ref|XM_623758.1| PREDICTED: Apis mellifera similar to archvillin (LOC551361), mRNA
          Length = 5913

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 567 catttcatctactgacaata 586
           ||||||||||||||||||||
Sbjct: 924 catttcatctactgacaata 943
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>gb|AC127679.3| Mus musculus chromosome UL clone RP24-395N24, complete sequence
          Length = 162081

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 576    tactgacaatacagatgttg 595
              ||||||||||||||||||||
Sbjct: 136906 tactgacaatacagatgttg 136925
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>gb|U66083.1|HSU66083 Human contig of two cosmids from LLNL X chromosome library (U83F1,
             U109H10), including MAGE-9 antigen (MAGE9) gene, complete
             cds, and three genes of unknown function
          Length = 73360

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   tcctgcaagctattccaata 543
             ||||||||||||||||||||
Sbjct: 54199 tcctgcaagctattccaata 54180
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>gb|AC009264.6|AC009264 Homo sapiens chromosome 7 clone RP11-271F4, complete sequence
          Length = 164824

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 96     aagacagaaatacaaatttaagtg 119
              ||||||||||||||||| ||||||
Sbjct: 107374 aagacagaaatacaaatgtaagtg 107351
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>gb|AC012486.9| Homo sapiens BAC clone RP11-84A12 from 2, complete sequence
          Length = 170220

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 90    gctaaaaagacagaaatacaaatt 113
             |||||||||| |||||||||||||
Sbjct: 47894 gctaaaaagaaagaaatacaaatt 47917
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>gb|AC009332.6|AC009332 Homo sapiens chromosome 7 clone RP11-348O21, complete sequence
          Length = 148471

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 96     aagacagaaatacaaatttaagtg 119
              ||||||||||||||||| ||||||
Sbjct: 130044 aagacagaaatacaaatgtaagtg 130021
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 537     tccaatagcgccttgagcaactgc 560
               ||||||||||||||||||| ||||
Sbjct: 1950549 tccaatagcgccttgagcatctgc 1950526
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>gb|AC157891.3| Medicago truncatula chromosome 7 BAC clone mte1-1i2, complete sequence
          Length = 154095

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 174   aaacaaaatcaacactatcagagc 197
             |||||||||||||||| |||||||
Sbjct: 77959 aaacaaaatcaacactctcagagc 77982
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>emb|BX539333.2| Mouse DNA sequence from clone RP23-138J24 on chromosome X, complete
             sequence
          Length = 212455

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 576   tactgacaatacagatgttg 595
             ||||||||||||||||||||
Sbjct: 51499 tactgacaatacagatgttg 51518
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>gb|AC114424.10| Mus musculus chromosome 3, clone RP24-84L9, complete sequence
          Length = 220500

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 501    ctccatcattttatcatcat 520
              ||||||||||||||||||||
Sbjct: 157695 ctccatcattttatcatcat 157714
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>emb|CR450687.16| Zebrafish DNA sequence from clone CH211-204A13 in linkage group 19,
            complete sequence
          Length = 143150

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   gacagaaatacaaatttaag 117
            ||||||||||||||||||||
Sbjct: 3032 gacagaaatacaaatttaag 3013
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 544     gcgccttgagcaactgctgg 563
               ||||||||||||||||||||
Sbjct: 2672866 gcgccttgagcaactgctgg 2672885
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      cttccagaactcgatgaaaa 41
               ||||||||||||||||||||
Sbjct: 2170784 cttccagaactcgatgaaaa 2170765


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,493,163
Number of Sequences: 3902068
Number of extensions: 6493163
Number of successful extensions: 128884
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 128593
Number of HSP's gapped (non-prelim): 289
length of query: 621
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 598
effective length of database: 17,143,297,704
effective search space: 10251692026992
effective search space used: 10251692026992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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