ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags32c08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1 Length = 833 Score = 1201 bits (606), Expect = 0.0 Identities = 662/675 (98%), Gaps = 5/675 (0%) Strand = Plus / Minus Query: 1 aaatgaaattgatntgaaaaatnaa-cacaacttgaaa-cagactcggagttgacctcac 58 ||||||||||||| |||||||| || |||||||||||| ||||||||||||||||||||| Sbjct: 802 aaatgaaattgatatgaaaaattaaacacaacttgaaatcagactcggagttgacctcac 743 Query: 59 aagcgcacgaacacatgcatcaaattaaaccgacacgctgacaccacgacgacctttgct 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 aagcgcacgaacacatgcatcaaattaaaccgacacgctgacaccacgacgacctttgct 683 Query: 119 gagaactgcttaattngccgctgccgccgagcacggacttgagcttcttcacctgcgcgt 178 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 682 gagaactgcttaattagccgctgccgccgagcacggacttgagcttcttcacctgcgcgt 623 Query: 179 cgtccaagaaggtgaccttctcaaccacggcggatggcaggttgttggcgaagagcgcgt 238 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 622 cgtccaagaaggtgaccttctcaacgacggcggatggcaggttgttggcgaagagcgcgt 563 Query: 239 agtcagtgatctggaggcctgggttggggccgctgaacgcaacgagcgctaccgccgcgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 agtcagtgatctggaggcctgggttggggccgctgaacgcaacgagcgctaccgccgcgg 503 Query: 299 agctgccaccgttgtactggtagtggagcaggccctgggggaacaccatgatgtcgccct 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 agctgccaccgttgtactggtagtggagcaggccctgggggaacaccatgatgtcgccct 443 Query: 359 tgtagagcgtcttggtgtacacggtgttggaggaggagctgatgaagcccgccaagatgg 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 tgtagagcgtcttggtgtacacggtgttggaggaggagctgatgaagcccgccaagatgg 383 Query: 419 tgccctcggttacgaagaggagctcagaggcggccgggtgggtgtgcatcggcacgacgc 478 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 tgccctcggtgacgaagaggagctcagaggcggccgggtgggtgtgcatcggcacgacgc 323 Query: 479 cgcccacggcgatgtcgagcctcgccgcagagatgccgagcccgttcacgccggggaact 538 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 322 cgcccacggcgatgtcgagcctcgccgcggagatgccgagcccgttcacgccggggaact 263 Query: 539 ggccgacgaaggcccggggttacggccgccttgatgaggttgcttggtgttgcccgcggc 598 |||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 262 ggccgacgaagg-ccggggttacgaccgccttgatgaggttgc-tggtgttgcccgcggc 205 Query: 599 ggcgaggcccgtggtagtagaagtcccccgcgccgacgccggtcttgcacgggtaccccg 658 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 ggcga-gaccgtggtagtagaagtcccccgcgccgacgccggtcttgcacgggtaccccg 146 Query: 659 ccggcgtgtcgctgc 673 ||||||||||||||| Sbjct: 145 ccggcgtgtcgctgc 131
>emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diphosphate glucose pyrophosphatase (sagppase gene) Length = 639 Score = 981 bits (495), Expect = 0.0 Identities = 531/539 (98%), Gaps = 3/539 (0%) Strand = Plus / Minus Query: 135 gccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgac 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 636 gccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgac 577 Query: 195 cttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggag 254 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 576 cttctcaacgacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggag 517 Query: 255 gcctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgta 314 ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 516 gcctgggttggggccgctgaacgcaacgagcgctaccgcggaggagctgccaccgttgta 457 Query: 315 ctggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggt 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 ctggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggt 397 Query: 375 gtacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaa 434 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 396 gtacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcagtgacgaa 337 Query: 435 gaggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 336 gaggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtc 277 Query: 495 gagcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggcccg 554 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 276 gagcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaagg-ccg 218 Query: 555 gggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggcccgtggta 614 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 217 gggttacggccgccttgatgaggttgc-tggtgttgcccgcggcggcgagg-ccgtggta 160 Query: 615 gtagaagtcccccgcgccgacgccggtcttgcacgggtaccccgccggcgtgtcgctgc 673 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 gtagaagtcccccgcgccgacgccggtcttgcacgggtaccccgccggcgtgtcgctgc 101
>emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine diphosphate glucose pyrophosphatase Length = 642 Score = 831 bits (419), Expect = 0.0 Identities = 512/539 (94%), Gaps = 3/539 (0%) Strand = Plus / Minus Query: 135 gccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgac 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 gccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgac 580 Query: 195 cttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggag 254 ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 579 cttctcaacgacggcggacggcaggttgttggcgaagagcgcgtagtcagtgatctgcag 520 Query: 255 gcctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgta 314 ||| ||||||||||||||||||||||||||||| ||||| || |||| ||| |||||||| Sbjct: 519 gccggggttggggccgctgaacgcaacgagcgccaccgctgccgagccgccgccgttgta 460 Query: 315 ctggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggt 374 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 459 ctggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagtgtcttggt 400 Query: 375 gtacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaa 434 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || || Sbjct: 399 gtacacggtgttggaggaggagctgatgaagcccgccaggatggtgccctcggtgacaaa 340 Query: 435 gaggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtc 494 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 339 caggagctcagaggcggccgggtgggtgtgcagcggcacgacgccgcccatggcgatgtc 280 Query: 495 gagcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggcccg 554 ||||||||| || |||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 279 gagcctcgctgcggagatgccgagcccgttcacgccggggaactgcccgacgaagg-ccg 221 Query: 555 gggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggcccgtggta 614 |||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 220 gggtcacggccgccttgatgaggttgc-tggtgttgcccgcggcggcgagg-ccgtggta 163 Query: 615 gtagaagtcccccgcgccgacgccggtcttgcacgggtaccccgccggcgtgtcgctgc 673 |||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||||| Sbjct: 162 gtagaagtcccctgcgctgacgccggccttgcacgggtaccccgccggtgtgtcgctgc 104
>gb|AF032975.1|AF032975 Oryza sativa germin-like protein 5 (GER5) mRNA, complete cds Length = 1030 Score = 599 bits (302), Expect = e-168 Identities = 482/538 (89%), Gaps = 3/538 (0%) Strand = Plus / Minus Query: 136 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 195 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 682 Query: 196 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 255 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 681 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 622 Query: 256 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 315 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 621 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 562 Query: 316 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 375 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 561 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 502 Query: 376 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 435 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 501 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 442 Query: 436 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 495 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 441 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 382 Query: 496 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggcccgg 555 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 381 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaagg-ccgg 323 Query: 556 ggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggcccgtggtag 615 ||| ||||| |||||||||||||||| ||||||||||||| || |||||| ||||||||| Sbjct: 322 ggtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgagg-ccgtggtag 265 Query: 616 tagaagtcccccgcgccgacgccggtcttgcacgggtaccccgccggcgtgtcgctgc 673 |||||| || |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 264 gcgaagtcgccggcgccgacgctggccttgcacgggtaccccgccggcgtgtcgctgc 207
>ref|XM_482788.1| Oryza sativa (japonica cultivar-group), mRNA Length = 938 Score = 591 bits (298), Expect = e-165 Identities = 481/538 (89%), Gaps = 3/538 (0%) Strand = Plus / Minus Query: 136 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 195 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 680 Query: 196 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 255 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 679 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 620 Query: 256 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 315 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 619 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 560 Query: 316 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 375 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 559 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 500 Query: 376 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 435 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 499 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 440 Query: 436 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 495 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 439 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 380 Query: 496 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggcccgg 555 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 379 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaagg-ccgg 321 Query: 556 ggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggcccgtggtag 615 || ||||| |||||||||||||||| ||||||||||||| || |||||| ||||||||| Sbjct: 320 cgtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgagg-ccgtggtag 263 Query: 616 tagaagtcccccgcgccgacgccggtcttgcacgggtaccccgccggcgtgtcgctgc 673 |||||| || |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 262 gcgaagtcgccggcgccgacgctggccttgcacgggtaccccgccggcgtgtcgctgc 205
>ref|XM_507258.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.40 mRNA Length = 994 Score = 591 bits (298), Expect = e-165 Identities = 481/538 (89%), Gaps = 3/538 (0%) Strand = Plus / Minus Query: 136 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 195 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 669 Query: 196 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 255 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 668 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 609 Query: 256 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 315 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 608 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 549 Query: 316 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 375 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 548 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 489 Query: 376 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 435 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 488 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 429 Query: 436 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 495 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 428 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 369 Query: 496 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggcccgg 555 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 368 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaagg-ccgg 310 Query: 556 ggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggcccgtggtag 615 || ||||| |||||||||||||||| ||||||||||||| || |||||| ||||||||| Sbjct: 309 cgtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgagg-ccgtggtag 252 Query: 616 tagaagtcccccgcgccgacgccggtcttgcacgggtaccccgccggcgtgtcgctgc 673 |||||| || |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 251 gcgaagtcgccggcgccgacgctggccttgcacgggtaccccgccggcgtgtcgctgc 194
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 591 bits (298), Expect = e-165 Identities = 481/538 (89%), Gaps = 3/538 (0%) Strand = Plus / Plus Query: 136 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 195 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22551065 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 22551124 Query: 196 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 255 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 22551125 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 22551184 Query: 256 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 315 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 22551185 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 22551244 Query: 316 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 375 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 22551245 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 22551304 Query: 376 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 435 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 22551305 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 22551364 Query: 436 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 495 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 22551365 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 22551424 Query: 496 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggcccgg 555 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 22551425 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaagg-ccgg 22551483 Query: 556 ggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggcccgtggtag 615 || ||||| |||||||||||||||| ||||||||||||| || |||||| ||||||||| Sbjct: 22551484 cgtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgagg-ccgtggtag 22551541 Query: 616 tagaagtcccccgcgccgacgccggtcttgcacgggtaccccgccggcgtgtcgctgc 673 |||||| || |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 22551542 gcgaagtcgccggcgccgacgctggccttgcacgggtaccccgccggcgtgtcgctgc 22551599 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 214 ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctg 273 ||||||||||||||||||||||||||||| |||||| ||||| ||||| | || |||| Sbjct: 22546182 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggttcgagctgctg 22546241 Query: 274 aacgcaacgagcgctaccgccgcggagctgccaccgttgtactggtagtggagcaggccc 333 |||| ||| ||| ||||||| | | ||| |||||||||| |||||||||||||| Sbjct: 22546242 tacgccgcgaacgccaccgccgtcgtgtcgccggtgttgtactggaagtggagcaggccc 22546301 Query: 334 tgggggaacac 344 || |||||||| Sbjct: 22546302 tgcgggaacac 22546312 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 434 agaggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcc 482 |||||||||| ||| ||||||| |||||||||| ||||||||||||||| Sbjct: 22546402 agaggagctcggagccggccggatgggtgtgcagcggcacgacgccgcc 22546450
>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690E03 Length = 139924 Score = 591 bits (298), Expect = e-165 Identities = 481/538 (89%), Gaps = 3/538 (0%) Strand = Plus / Plus Query: 136 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 195 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24566 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 24625 Query: 196 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 255 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 24626 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 24685 Query: 256 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 315 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 24686 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 24745 Query: 316 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 375 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 24746 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 24805 Query: 376 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 435 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 24806 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 24865 Query: 436 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 495 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 24866 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 24925 Query: 496 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggcccgg 555 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 24926 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaagg-ccgg 24984 Query: 556 ggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggcccgtggtag 615 || ||||| |||||||||||||||| ||||||||||||| || |||||| ||||||||| Sbjct: 24985 cgtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgagg-ccgtggtag 25042 Query: 616 tagaagtcccccgcgccgacgccggtcttgcacgggtaccccgccggcgtgtcgctgc 673 |||||| || |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 25043 gcgaagtcgccggcgccgacgctggccttgcacgggtaccccgccggcgtgtcgctgc 25100 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 214 ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctg 273 ||||||||||||||||||||||||||||| |||||| ||||| ||||| | || |||| Sbjct: 19683 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggttcgagctgctg 19742 Query: 274 aacgcaacgagcgctaccgccgcggagctgccaccgttgtactggtagtggagcaggccc 333 |||| ||| ||| ||||||| | | ||| |||||||||| |||||||||||||| Sbjct: 19743 tacgccgcgaacgccaccgccgtcgtgtcgccggtgttgtactggaagtggagcaggccc 19802 Query: 334 tgggggaacac 344 || |||||||| Sbjct: 19803 tgcgggaacac 19813 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 434 agaggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcc 482 |||||||||| ||| ||||||| |||||||||| ||||||||||||||| Sbjct: 19903 agaggagctcggagccggccggatgggtgtgcagcggcacgacgccgcc 19951
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0493A04 Length = 149367 Score = 591 bits (298), Expect = e-165 Identities = 481/538 (89%), Gaps = 3/538 (0%) Strand = Plus / Plus Query: 136 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 195 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145993 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 146052 Query: 196 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 255 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 146053 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 146112 Query: 256 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 315 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 146113 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 146172 Query: 316 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 375 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 146173 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 146232 Query: 376 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 435 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 146233 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 146292 Query: 436 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 495 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 146293 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 146352 Query: 496 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggcccgg 555 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 146353 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaagg-ccgg 146411 Query: 556 ggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggcccgtggtag 615 || ||||| |||||||||||||||| ||||||||||||| || |||||| ||||||||| Sbjct: 146412 cgtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgagg-ccgtggtag 146469 Query: 616 tagaagtcccccgcgccgacgccggtcttgcacgggtaccccgccggcgtgtcgctgc 673 |||||| || |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 146470 gcgaagtcgccggcgccgacgctggccttgcacgggtaccccgccggcgtgtcgctgc 146527 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 214 ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctg 273 ||||||||||||||||||||||||||||| |||||| ||||| ||||| | || |||| Sbjct: 141110 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggttcgagctgctg 141169 Query: 274 aacgcaacgagcgctaccgccgcggagctgccaccgttgtactggtagtggagcaggccc 333 |||| ||| ||| ||||||| | | ||| |||||||||| |||||||||||||| Sbjct: 141170 tacgccgcgaacgccaccgccgtcgtgtcgccggtgttgtactggaagtggagcaggccc 141229 Query: 334 tgggggaacac 344 || |||||||| Sbjct: 141230 tgcgggaacac 141240 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 434 agaggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcc 482 |||||||||| ||| ||||||| |||||||||| ||||||||||||||| Sbjct: 141330 agaggagctcggagccggccggatgggtgtgcagcggcacgacgccgcc 141378
>dbj|AK104729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C02, full insert sequence Length = 938 Score = 591 bits (298), Expect = e-165 Identities = 481/538 (89%), Gaps = 3/538 (0%) Strand = Plus / Minus Query: 136 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 195 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 680 Query: 196 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 255 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 679 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 620 Query: 256 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 315 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 619 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 560 Query: 316 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 375 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 559 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 500 Query: 376 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 435 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 499 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 440 Query: 436 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 495 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 439 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 380 Query: 496 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggcccgg 555 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 379 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaagg-ccgg 321 Query: 556 ggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggcccgtggtag 615 || ||||| |||||||||||||||| ||||||||||||| || |||||| ||||||||| Sbjct: 320 cgtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgagg-ccgtggtag 263 Query: 616 tagaagtcccccgcgccgacgccggtcttgcacgggtaccccgccggcgtgtcgctgc 673 |||||| || |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 262 gcgaagtcgccggcgccgacgctggccttgcacgggtaccccgccggcgtgtcgctgc 205
>dbj|AK065284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M08, full insert sequence Length = 994 Score = 591 bits (298), Expect = e-165 Identities = 481/538 (89%), Gaps = 3/538 (0%) Strand = Plus / Minus Query: 136 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 195 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 669 Query: 196 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 255 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 668 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 609 Query: 256 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 315 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 608 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 549 Query: 316 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 375 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 548 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 489 Query: 376 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 435 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 488 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 429 Query: 436 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 495 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 428 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 369 Query: 496 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggcccgg 555 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 368 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaagg-ccgg 310 Query: 556 ggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggcccgtggtag 615 || ||||| |||||||||||||||| ||||||||||||| || |||||| ||||||||| Sbjct: 309 cgtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgagg-ccgtggtag 252 Query: 616 tagaagtcccccgcgccgacgccggtcttgcacgggtaccccgccggcgtgtcgctgc 673 |||||| || |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 251 gcgaagtcgccggcgccgacgctggccttgcacgggtaccccgccggcgtgtcgctgc 194
>dbj|AB015593.1| Oryza sativa OsGLP1 gene for germin-like protein 1, complete cds Length = 642 Score = 591 bits (298), Expect = e-165 Identities = 481/538 (89%), Gaps = 3/538 (0%) Strand = Plus / Minus Query: 136 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 195 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 579 Query: 196 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 255 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 578 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 519 Query: 256 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 315 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 518 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 459 Query: 316 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 375 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 458 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 399 Query: 376 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 435 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 398 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 339 Query: 436 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 495 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 338 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 279 Query: 496 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggcccgg 555 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 278 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaagg-ccgg 220 Query: 556 ggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggcccgtggtag 615 || ||||| |||||||||||||||| ||||||||||||| || |||||| ||||||||| Sbjct: 219 cgtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgagg-ccgtggtag 162 Query: 616 tagaagtcccccgcgccgacgccggtcttgcacgggtaccccgccggcgtgtcgctgc 673 |||||| || |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 161 gcgaagtcgccggcgccgacgctggccttgcacgggtaccccgccggcgtgtcgctgc 104
>gb|AF051156.1|AF051156 Oryza sativa germin-like protein (GLP110) mRNA, complete cds Length = 1004 Score = 575 bits (290), Expect = e-161 Identities = 479/538 (89%), Gaps = 3/538 (0%) Strand = Plus / Minus Query: 136 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 195 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 661 Query: 196 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 255 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 660 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 601 Query: 256 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 315 || ||||||||||||||||| || |||||||| |||||||| || ||| |||||||| Sbjct: 600 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 541 Query: 316 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 375 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 540 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 481 Query: 376 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 435 || |||||||||||||||||| ||||||| || || || |||||| | ||| ||||| Sbjct: 480 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccttgggtgacgaac 421 Query: 436 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 495 |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 420 aggagctcggaggcggccgggtgggtgtggagcggcacgacgccgccgacggcgatgtcc 361 Query: 496 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggcccgg 555 ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 360 agcttcgccgcggagataccgagcccgttcacgccggggaactggccgacgaagg-ccgg 302 Query: 556 ggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggcccgtggtag 615 || ||||| |||||||||||||||| ||||||||||||| || |||||| ||||||||| Sbjct: 301 cgtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgagg-ccgtggtag 244 Query: 616 tagaagtcccccgcgccgacgccggtcttgcacgggtaccccgccggcgtgtcgctgc 673 |||||| || |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 243 gcgaagtcgccggcgccgacgctggccttgcacgggtaccccgccggcgtgtcgctgc 186
>dbj|AB010876.1| Oryza sativa OsGLP1 mRNA for germin-like protein 1, complete cds Length = 994 Score = 543 bits (274), Expect = e-151 Identities = 475/538 (88%), Gaps = 3/538 (0%) Strand = Plus / Minus Query: 136 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 195 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 681 Query: 196 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 255 ||||| || | |||||| |||||||||||||||||||| |||||||| | ||||| || Sbjct: 680 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcgttaatctgaagc 621 Query: 256 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 315 || ||||||||||||||||| | |||||||| |||||||| || ||| |||||||| Sbjct: 620 ccggggttggggccgctgaagccgacgagcgccaccgccgccgactggccggcgttgtac 561 Query: 316 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 375 |||||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| Sbjct: 560 tggtagtgcaggaggccctgggggaacaccatgatgtcgccggcgtacagcgtcctggtg 501 Query: 376 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 435 || |||||||||||||||||| ||||||| || || || |||||||| ||| ||||| Sbjct: 500 tagacggtgttggaggaggaggtgatgaacccggcggcgacggtgccctgggtgacgaac 441 Query: 436 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 495 |||||||| |||||||||||||||||||| | |||||||||||| || ||||||||||| Sbjct: 440 aggagctcggaggcggccgggtgggtgtggagcggcacgacgcccccgacggcgatgtcc 381 Query: 496 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggcccgg 555 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 380 agcctcgccgcggagataccgagcccgttcacgccggggaactggccgacgaagg-ccgg 322 Query: 556 ggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggcccgtggtag 615 || ||||| |||||||||||||||| ||||||||||||| || |||||| ||||||||| Sbjct: 321 cgtcacggcggccttgatgaggttgc-tggtgttgcccgccgccgcgagg-ccgtggtag 264 Query: 616 tagaagtcccccgcgccgacgccggtcttgcacgggtaccccgccggcgtgtcgctgc 673 |||||| || |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 263 gcgaagtcgccggcgccgacgctggccttgcacgggtaccccgccggcgtgtcgctgc 206
>gb|AY394010.1| Zea mays germin-like protein (glp1) gene, promoter region and complete cds Length = 2490 Score = 448 bits (226), Expect = e-122 Identities = 463/538 (86%), Gaps = 3/538 (0%) Strand = Plus / Minus Query: 136 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 195 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2089 ccgctgccgccgagcacactcttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 2030 Query: 196 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 255 ||||| || |||||||| || ||||||||||| |||||||| |||| |||||||| ||| Sbjct: 2029 ttctccacgacggcggacgggaggttgttggcaaagagcgcaaagtcggtgatctgcagg 1970 Query: 256 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 315 || |||||||||| |||||| || ||||| | || || ||| | |||| |||||||| Sbjct: 1969 ccggggttggggctgctgaaggcgacgaggcccacggcagcgccggtgccggcgttgtac 1910 Query: 316 tggtagtggagcaggccctgggggaacaccatgatgtcgcccttgtagagcgtcttggtg 375 ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||| Sbjct: 1909 tggtagtggagcaggccctgggggaacaccatgatgtcgccggcgtacagtgtcttggtg 1850 Query: 376 tacacggtgttggaggaggagctgatgaagcccgccaagatggtgccctcggttacgaag 435 || |||||||||||| ||||||||||||||| || || |||||||| ||| |||||| Sbjct: 1849 tagacggtgttggagccggagctgatgaagccggcggcgacggtgccctgggtcacgaag 1790 Query: 436 aggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcccacggcgatgtcg 495 |||||||| ||| | |||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 1789 aggagctctgagcccgccgggtgggtgtgcagcggcacgacgccgcccacctcgatgtcg 1730 Query: 496 agcctcgccgcagagatgccgagcccgttcacgccggggaactggccgacgaaggcccgg 555 ||||| |||||||||||||| |||||||| ||||| ||||||||||| ||||||| |||| Sbjct: 1729 agcctggccgcagagatgccaagcccgttgacgcccgggaactggcccacgaagg-ccgg 1671 Query: 556 ggttacggccgccttgatgaggttgcttggtgttgcccgcggcggcgaggcccgtggtag 615 ||| ||||| |||||||||| || | || | |||||| | |||| ||| |||||| || Sbjct: 1670 ggtcacggcggccttgatga-gtgggtttattttgccctggccggccagg-ccgtggaag 1613 Query: 616 tagaagtcccccgcgccgacgccggtcttgcacgggtaccccgccggcgtgtcgctgc 673 |||||||| ||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 1612 tagaagtcgttggcggtgacgctggacttgcacgggtaccccgccggcgtgtcgctgc 1555
>gb|AY112552.1| Zea mays CL11523_1 mRNA sequence Length = 544 Score = 143 bits (72), Expect = 9e-31 Identities = 151/179 (84%) Strand = Plus / Plus Query: 173 gcgcgtcgtccaagaaggtgaccttctcaaccacggcggatggcaggttgttggcgaaga 232 |||||||||||||||||||||||||||| || |||||||| || ||||||||||| |||| Sbjct: 366 gcgcgtcgtccaagaaggtgaccttctccacgacggcggacgggaggttgttggcaaaga 425 Query: 233 gcgcgtagtcagtgatctggaggcctgggttggggccgctgaacgcaacgagcgctaccg 292 |||| |||| |||||||| ||||| |||||||||| |||||| || ||||| | || | Sbjct: 426 gcgcaaagtcggtgatctgcaggccggggttggggctgctgaaggcgacgaggcccacgg 485 Query: 293 ccgcggagctgccaccgttgtactggtagtggagcaggccctgggggaacaccatgatg 351 | ||| | |||| ||||||||||||||||||||||||||| |||||||||||| Sbjct: 486 cagcgccggtgccggcgttgtactggtagtggagcaggccctnnnnnaacaccatgatg 544
>ref|XM_482785.1| Oryza sativa (japonica cultivar-group), mRNA Length = 660 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 214 ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctg 273 ||||||||||||||||||||||||||||| |||||| ||||| ||||| | || |||| Sbjct: 578 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggttcgagctgctg 519 Query: 274 aacgcaacgagcgctaccgccgcggagctgccaccgttgtactggtagtggagcaggccc 333 |||| ||| ||| ||||||| | | ||| |||||||||| |||||||||||||| Sbjct: 518 tacgccgcgaacgccaccgccgtcgtgtcgccggtgttgtactggaagtggagcaggccc 459 Query: 334 tgggggaacac 344 || |||||||| Sbjct: 458 tgcgggaacac 448 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 434 agaggagctcagaggcggccgggtgggtgtgcatcggcacgacgccgcc 482 |||||||||| ||| ||||||| |||||||||| ||||||||||||||| Sbjct: 358 agaggagctcggagccggccggatgggtgtgcagcggcacgacgccgcc 310
>ref|XM_471594.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1299 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 337 gggaacaccatgatgtcgcccttgtagagcgtcttggtgtacacggtgttggaggaggag 396 ||||||||||||| |||||||||| |||||| |||||||||| ||||||| | ||| Sbjct: 440 gggaacaccatgaggtcgcccttgcggagcgtgctggtgtacaccttgttggatgtagag 381 Query: 397 ctgatgaa 404 |||||||| Sbjct: 380 ctgatgaa 373 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 217 aggttgttggcgaagagcgcgtagtcagtgatctg 251 ||||||||||||||||||||| |||| ||||||| Sbjct: 581 aggttgttggcgaagagcgcgaagtccatgatctg 547 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 642 cttgcacgggtaccccgccggcgtgtcgc 670 |||||||||||| || ||||||||||||| Sbjct: 132 cttgcacgggtagccggccggcgtgtcgc 104
>emb|AL731615.4|OSJN00256 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065J03, complete sequence Length = 144146 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 337 gggaacaccatgatgtcgcccttgtagagcgtcttggtgtacacggtgttggaggaggag 396 ||||||||||||| |||||||||| |||||| |||||||||| ||||||| | ||| Sbjct: 38043 gggaacaccatgaggtcgcccttgcggagcgtgctggtgtacaccttgttggatgtagag 37984 Query: 397 ctgatgaa 404 |||||||| Sbjct: 37983 ctgatgaa 37976 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 217 aggttgttggcgaagagcgcgtagtcagtgatctg 251 ||||||||||||||||||||| |||| ||||||| Sbjct: 38184 aggttgttggcgaagagcgcgaagtccatgatctg 38150 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 642 cttgcacgggtaccccgccggcgtgtcgc 670 |||||||||||| || ||||||||||||| Sbjct: 37534 cttgcacgggtagccggccggcgtgtcgc 37506
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 337 gggaacaccatgatgtcgcccttgtagagcgtcttggtgtacacggtgttggaggaggag 396 ||||||||||||| |||||||||| |||||| |||||||||| ||||||| | ||| Sbjct: 12556182 gggaacaccatgaggtcgcccttgcggagcgtgctggtgtacaccttgttggatgtagag 12556241 Query: 397 ctgatgaa 404 |||||||| Sbjct: 12556242 ctgatgaa 12556249 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 217 aggttgttggcgaagagcgcgtagtcagtgatctg 251 ||||||||||||||||||||| |||| ||||||| Sbjct: 12556041 aggttgttggcgaagagcgcgaagtccatgatctg 12556075 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 642 cttgcacgggtaccccgccggcgtgtcgc 670 |||||||||||| || ||||||||||||| Sbjct: 12556691 cttgcacgggtagccggccggcgtgtcgc 12556719
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 586 tgttgcccgcggcggcgaggcc 607 |||||||||||||||||||||| Sbjct: 2543208 tgttgcccgcggcggcgaggcc 2543187
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 586 tgttgcccgcggcggcgaggcc 607 |||||||||||||||||||||| Sbjct: 3495759 tgttgcccgcggcggcgaggcc 3495738
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 137 cgctgccgccgagcacggacttgagc 162 |||||||||||||||||| ||||||| Sbjct: 7136995 cgctgccgccgagcacggccttgagc 7137020
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 586 tgttgcccgcggcggcgaggcc 607 |||||||||||||||||||||| Sbjct: 1370677 tgttgcccgcggcggcgaggcc 1370698 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cttcttcacctgcgcgtcgt 181 |||||||||||||||||||| Sbjct: 2421518 cttcttcacctgcgcgtcgt 2421499
>gb|AY299121.1| Xanthomonas oryzae bacteriophage Xp10 genomic DNA, complete genome Length = 44373 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 agcttcttcacctgcgcgtcg 180 ||||||||||||||||||||| Sbjct: 10658 agcttcttcacctgcgcgtcg 10638
>emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chromosome 6 Contains a novel gene, the FOXP4 gene for forkhead box P4 and five CpG islands, complete sequence Length = 180547 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 432 gaagaggagctcagaggcggc 452 ||||||||||||||||||||| Sbjct: 166396 gaagaggagctcagaggcggc 166376
>emb|BX294147.1| Pirellula sp. strain 1 complete genome; segment 15/24 Length = 314450 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 341 acaccatgatgtcgcccttgtagag 365 |||||||||||| |||||||||||| Sbjct: 172639 acaccatgatgttgcccttgtagag 172615
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 gagcttcttcacctgcgcgtcgtcc 183 |||||||||||||| |||||||||| Sbjct: 305483 gagcttcttcaccttcgcgtcgtcc 305507
>gb|BC101772.1| Homo sapiens stoned B/TFIIA-alpha/beta-like factor, mRNA (cDNA clone MGC:126821 IMAGE:8069278), complete cds Length = 3675 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tggaggaggagctgatgaag 405 |||||||||||||||||||| Sbjct: 1205 tggaggaggagctgatgaag 1224
>gb|BC101774.1| Homo sapiens stoned B/TFIIA-alpha/beta-like factor, mRNA (cDNA clone MGC:126823 IMAGE:8069280), complete cds Length = 3675 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tggaggaggagctgatgaag 405 |||||||||||||||||||| Sbjct: 1205 tggaggaggagctgatgaag 1224
>ref|NM_183572.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 951 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cggtgttggaggaggagctg 399 |||||||||||||||||||| Sbjct: 787 cggtgttggaggaggagctg 768
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 gtggagcaggccctggggga 340 |||||||||||||||||||| Sbjct: 1620051 gtggagcaggccctggggga 1620032
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 acggtgttggaggaggagct 398 |||||||||||||||||||| Sbjct: 2064395 acggtgttggaggaggagct 2064376
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cttcttcacctgcgcgtcgt 181 |||||||||||||||||||| Sbjct: 2254715 cttcttcacctgcgcgtcgt 2254734
>ref|XM_515467.1| PREDICTED: Pan troglodytes LOC459223 (LOC459223), mRNA Length = 3820 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tggaggaggagctgatgaag 405 |||||||||||||||||||| Sbjct: 1248 tggaggaggagctgatgaag 1267
>ref|NM_172311.1| Homo sapiens stoned B/TFIIA-alpha/beta-like factor (SALF), mRNA Length = 3824 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tggaggaggagctgatgaag 405 |||||||||||||||||||| Sbjct: 1292 tggaggaggagctgatgaag 1311
>gb|AY441676.1| Galago senegalensis SINE element Mad3 Length = 528 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 349 atgtcgcccttgtagagcgtcttggtgt 376 ||||||||||||||||||| | |||||| Sbjct: 331 atgtcgcccttgtagagcgccctggtgt 304
>gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility locus class III region:butyrophilin-like protein gene, partial cds; Notch4, PBX2, RAGE, lysophatidic acid acyl transferase-alpha, palmitoyl-protein thioesterase 2 (PPT2), CREB-RP, and tenascin X (TNX) genes, complete cds; and CYP21OHB pseudogene, complete sequence Length = 201964 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tctggaggcctgggttgggg 267 |||||||||||||||||||| Sbjct: 197488 tctggaggcctgggttgggg 197507
>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region: complement C4 (C4) and cytochrome P450 hydroxylase A (CYP21OH-A) genes, complete cds; slp pseudogene, complete sequence; NG6, SKI, and complement factor B (Bf) genes, complete cds; and complement factor C2 (C2) gene, partial cds Length = 149886 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tctggaggcctgggttgggg 267 |||||||||||||||||||| Sbjct: 77548 tctggaggcctgggttgggg 77567
>ref|XR_002034.1| PREDICTED: Mus musculus similar to Cytochrome P450 XXI (Steroid 21-hydroxylase) (21-OHase) (P450-C21) (P-450c21) (LOC632302), mRNA Length = 1732 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tctggaggcctgggttgggg 267 |||||||||||||||||||| Sbjct: 917 tctggaggcctgggttgggg 898
>gb|AC130969.4| Rattus norvegicus 2 BAC CH230-105B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 238254 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 acacggtgttggaggaggagctga 400 |||||||| ||||||||||||||| Sbjct: 172507 acacggtgctggaggaggagctga 172484
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gccgctgccgccgagcacgg 154 |||||||||||||||||||| Sbjct: 2457731 gccgctgccgccgagcacgg 2457712
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 ggaggaggagctgatgaagc 406 |||||||||||||||||||| Sbjct: 2528932 ggaggaggagctgatgaagc 2528913
>gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosome 12, complete sequence Length = 205684 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 acacggtgttggaggaggagctga 400 ||||||||||||||||| |||||| Sbjct: 72880 acacggtgttggaggagtagctga 72857
>gb|AC124398.4| Mus musculus BAC clone RP24-349M24 from chromosome 12, complete sequence Length = 176369 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 acacggtgttggaggaggagctga 400 |||||||||||||| ||||||||| Sbjct: 172255 acacggtgttggagaaggagctga 172232
>gb|AC125092.4| Mus musculus BAC clone RP24-174F18 from chromosome 12, complete sequence Length = 178746 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 377 acacggtgttggaggaggagctga 400 |||||||||||||| ||||||||| Sbjct: 138391 acacggtgttggagaaggagctga 138414
>ref|NM_013137.1| Rattus norvegicus discoidin domain receptor family, member 1 (Ddr1), mRNA Length = 2733 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ggtgttggaggaggagctga 400 |||||||||||||||||||| Sbjct: 1350 ggtgttggaggaggagctga 1369
>gb|AC128353.6| Rattus norvegicus 13 BAC CH230-148A5 (Children's Hospital Oakland Research Institute) complete sequence Length = 207556 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 ggtgttggaggaggagctga 400 |||||||||||||||||||| Sbjct: 63469 ggtgttggaggaggagctga 63450
>emb|AL137793.16| Human DNA sequence from clone RP5-1065P14 on chromosome 1q41-42.2 Contains a novel pseudogene and a novel gene, complete sequence Length = 138419 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 ggagctcagaggcggccggg 456 |||||||||||||||||||| Sbjct: 114001 ggagctcagaggcggccggg 114020
>emb|BX883047.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 6/11 Length = 349571 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 ggtgttggaggaggagctga 400 |||||||||||||||||||| Sbjct: 265298 ggtgttggaggaggagctga 265279
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 ggtgttgcccgcggcggcga 603 |||||||||||||||||||| Sbjct: 134911 ggtgttgcccgcggcggcga 134930
>emb|CR936807.1| Homo sapiens mRNA; cDNA DKFZp781K2462 (from clone DKFZp781K2462) Length = 5620 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tggaggaggagctgatgaag 405 |||||||||||||||||||| Sbjct: 1373 tggaggaggagctgatgaag 1392
>emb|CR859409.1| Pongo pygmaeus mRNA; cDNA DKFZp469K176 (from clone DKFZp469K176) Length = 5526 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tggaggaggagctgatgaag 405 |||||||||||||||||||| Sbjct: 1268 tggaggaggagctgatgaag 1287
>gb|AE005925.1| Caulobacter crescentus CB15 section 251 of 359 of the complete genome Length = 11354 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 aggcccggggttacggccgc 567 |||||||||||||||||||| Sbjct: 908 aggcccggggttacggccgc 927
>gb|AE005860.1| Caulobacter crescentus CB15 section 186 of 359 of the complete genome Length = 11137 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cgcccacggcgatgtcgagc 498 |||||||||||||||||||| Sbjct: 2311 cgcccacggcgatgtcgagc 2330
>dbj|AB010266.1| Mus musculus Creb-rp, Tnx and Cyp21 genes for cAMP response element binding protein-related protein, tenascin-X and steroid 21-hydroxylase, partial cds and complete sequences Length = 67977 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tctggaggcctgggttgggg 267 |||||||||||||||||||| Sbjct: 66569 tctggaggcctgggttgggg 66588
>dbj|AK146565.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920026N02 product:cytochrome P450, family 21, subfamily a, polypeptide 1, full insert sequence Length = 2053 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tctggaggcctgggttgggg 267 |||||||||||||||||||| Sbjct: 822 tctggaggcctgggttgggg 803
>ref|NM_006873.2| Homo sapiens stonin 1 (STON1), mRNA Length = 5822 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tggaggaggagctgatgaag 405 |||||||||||||||||||| Sbjct: 1188 tggaggaggagctgatgaag 1207
>gb|S77556.1| Ptk-3S=radiation-induced gene {alternatively spliced} [rats, neonatal Sprague-Dawley, brain primary astrocyte, mRNA Partial, 549 nt] Length = 549 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ggtgttggaggaggagctga 400 |||||||||||||||||||| Sbjct: 150 ggtgttggaggaggagctga 169
>gb|S77585.1| Ptk-3L=radiation-induced gene [rats, neonatal Sprague-Dawley, brain primary astrocyte, mRNA Partial, 660 nt] Length = 660 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ggtgttggaggaggagctga 400 |||||||||||||||||||| Sbjct: 150 ggtgttggaggaggagctga 169
>gb|AC154448.2| Mus musculus BAC clone RP23-185F24 from chromosome 16, complete sequence Length = 203269 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 ggtgttggaggaggagctga 400 |||||||||||||||||||| Sbjct: 181403 ggtgttggaggaggagctga 181384
>gb|AF255310.1|AF255310 Homo sapiens stonin 1 mRNA, complete cds Length = 2509 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tggaggaggagctgatgaag 405 |||||||||||||||||||| Sbjct: 1188 tggaggaggagctgatgaag 1207
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 cagaggcggccgggtgggtg 462 |||||||||||||||||||| Sbjct: 21271706 cagaggcggccgggtgggtg 21271687 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cggtgttggaggaggagctg 399 |||||||||||||||||||| Sbjct: 10365273 cggtgttggaggaggagctg 10365254
>gb|AY613781.1| Mus musculus strain C57BL/10J truncated steroid 21-hydroxylase (Cyp21a1) gene, complete cds Length = 3261 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tctggaggcctgggttgggg 267 |||||||||||||||||||| Sbjct: 1511 tctggaggcctgggttgggg 1492
>gb|AY026319.1| Homo sapiens stoned B-like factor SBLF (SBLF) mRNA, complete cds Length = 2208 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tggaggaggagctgatgaag 405 |||||||||||||||||||| Sbjct: 1178 tggaggaggagctgatgaag 1197
>gb|AC139676.3| Homo sapiens chromosome 8, clone RP13-648O9, complete sequence Length = 166153 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tggaggcctgggttggggcc 269 |||||||||||||||||||| Sbjct: 10496 tggaggcctgggttggggcc 10515
>gb|AC154804.2| Mus musculus BAC clone RP24-506H9 from chromosome 16, complete sequence Length = 176299 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ggtgttggaggaggagctga 400 |||||||||||||||||||| Sbjct: 153396 ggtgttggaggaggagctga 153415
>gb|AC073082.6| Homo sapiens BAC clone RP11-310N16 from 2, complete sequence Length = 177047 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 tggaggaggagctgatgaag 405 |||||||||||||||||||| Sbjct: 122687 tggaggaggagctgatgaag 122668
>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete sequence Length = 96742 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 tgccgagcccgttcacgccg 531 |||||||||||||||||||| Sbjct: 70701 tgccgagcccgttcacgccg 70720
>dbj|AP002480.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0469E05 Length = 160769 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cggtgttggaggaggagctg 399 |||||||||||||||||||| Sbjct: 10233 cggtgttggaggaggagctg 10214
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 cagaggcggccgggtgggtg 462 |||||||||||||||||||| Sbjct: 169215 cagaggcggccgggtgggtg 169196
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 gccggggaactggccgacga 547 |||||||||||||||||||| Sbjct: 6983655 gccggggaactggccgacga 6983636
>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0511C01 Length = 170402 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cggtgttggaggaggagctg 399 |||||||||||||||||||| Sbjct: 71993 cggtgttggaggaggagctg 71974
>dbj|AB113399.1| Rattus norvegicus rCNR gene for cadherin-related neuronal receptor, exon cluster Length = 249555 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ggtgttggaggaggagctga 400 |||||||||||||||||||| Sbjct: 246730 ggtgttggaggaggagctga 246749
>dbj|AK102913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113M01, full insert sequence Length = 2519 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 ccttgatgaggttgcttggt 586 |||||||||||||||||||| Sbjct: 673 ccttgatgaggttgcttggt 692
>gb|DQ341430.1| Lynx lynx steroid 21-hydroxylase gene, complete cds Length = 2955 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tctggaggcctgggttgggg 267 |||||||||||||||||||| Sbjct: 1335 tctggaggcctgggttgggg 1316
>gb|AF026169.1|AF026169 Homo sapiens SALF (SALF) mRNA, complete cds Length = 3824 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tggaggaggagctgatgaag 405 |||||||||||||||||||| Sbjct: 1292 tggaggaggagctgatgaag 1311
>gb|AC006289.1|AC006289 Mus musculus chromosome 17, clone 29_N_7, complete sequence Length = 201986 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tctggaggcctgggttgggg 267 |||||||||||||||||||| Sbjct: 197509 tctggaggcctgggttgggg 197528
>emb|CT025759.14| Mouse DNA sequence from clone RP24-317H19 on chromosome 17, complete sequence Length = 171682 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tctggaggcctgggttgggg 267 |||||||||||||||||||| Sbjct: 31075 tctggaggcctgggttgggg 31094
>emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chromosome 17, complete sequence Length = 111957 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tctggaggcctgggttgggg 267 |||||||||||||||||||| Sbjct: 59098 tctggaggcctgggttgggg 59117
>ref|NM_009995.1| Mus musculus cytochrome P450, family 21, subfamily a, polypeptide 1 (Cyp21a1), mRNA Length = 1464 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tctggaggcctgggttgggg 267 |||||||||||||||||||| Sbjct: 658 tctggaggcctgggttgggg 639
>gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence, gene island PAGI-2(C) Length = 158230 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ggaggaggagctgatgaagc 406 |||||||||||||||||||| Sbjct: 111941 ggaggaggagctgatgaagc 111960
>emb|AL669898.17| Mouse DNA sequence from clone RP23-6C3 on chromosome X, complete sequence Length = 220201 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ggtgttggaggaggagctga 400 |||||||||||||||||||| Sbjct: 99853 ggtgttggaggaggagctga 99872
>emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chromosome X, complete sequence Length = 195413 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 ggtgttggaggaggagctga 400 |||||||||||||||||||| Sbjct: 64838 ggtgttggaggaggagctga 64819
>gb|M64933.1|MUSSLPSEXB Mouse nonfunctional sex-limited protein, and cytochrome P-450 (Cyp21) genes, complete cds Length = 26307 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tctggaggcctgggttgggg 267 |||||||||||||||||||| Sbjct: 24358 tctggaggcctgggttgggg 24339
>gb|M73820.1|MUSSLPSEXA Mouse sex-limited protein (SlpA) gene, exons 24-41, and cytochrome P-450 (Cyp21(w7A)) gene, exons 1-7 Length = 12544 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tctggaggcctgggttgggg 267 |||||||||||||||||||| Sbjct: 12129 tctggaggcctgggttgggg 12110
>gb|M15008.1|MUS21OHA2 Mouse steroid 21-hydroxylase B (21-OHase B) gene, complete cds Length = 3163 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tctggaggcctgggttgggg 267 |||||||||||||||||||| Sbjct: 1292 tctggaggcctgggttgggg 1273
>gb|M15009.1|MUS21OHA1 Mouse steroid 21-hydroxylase A (21-OHase A) gene, complete cds Length = 3307 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tctggaggcctgggttgggg 267 |||||||||||||||||||| Sbjct: 1516 tctggaggcctgggttgggg 1497
>gb|L26525.1|RATPTK3D Rattus norvegicus tyrosine kinase receptor (Ptk-3) gene, complete cds Length = 3743 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ggtgttggaggaggagctga 400 |||||||||||||||||||| Sbjct: 1527 ggtgttggaggaggagctga 1546 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,399,853 Number of Sequences: 3902068 Number of extensions: 4399853 Number of successful extensions: 93828 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92239 Number of HSP's gapped (non-prelim): 1522 length of query: 673 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 650 effective length of database: 17,143,297,704 effective search space: 11143143507600 effective search space used: 11143143507600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
