ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags32c06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ308488.1|HVU308488 Hordeum vulgare mRNA for allene oxide cyclase (aoc gene) Length = 920 Score = 1197 bits (604), Expect = 0.0 Identities = 618/620 (99%), Gaps = 2/620 (0%) Strand = Plus / Minus Query: 56 ttgcaacacacggagatt-attcaacttgcacgactgcacgagcagttggtgtacataac 114 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 ttgcaacacacggagattcattcaacttgcacgactgcacgagcagttggtgtacataac 809 Query: 115 atagctaggtagagtagatcacaggtacagctagtcagtgaagttgttgaggcatgcgtg 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 atagctaggtagagtagatcacaggtacagctagtcagtgaagttgttgaggcatgcgtg 749 Query: 175 tggctcggtggccttggcggcgggcgttggctcgacggtgggggaaggcgggacgggcgt 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 tggctcggtggccttggcggcgggcgttggctcgacggtgggggaaggcgggacgggcgt 689 Query: 235 gcagagcagctcctttggcaggtccgggatgcccttgaggtagaaagtgtagaagatctt 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 gcagagcagctcctttggcaggtccgggatgcccttgaggtagaaagtgtagaagatctt 629 Query: 295 gaaggggaagacgatctggttgagcttgacctgcccgtagacgccctcgaagacgccgga 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 gaaggggaagacgatctggttgagcttgacctgcccgtagacgccctcgaagacgccgga 569 Query: 355 gcctcctgtgacggcgaggtaggactcctcgtaggtgaggtagggcccctgcaggctgat 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 gcctcctgtgacggcgaggtaggactcctcgtaggtgaggtagggcccctgcaggctgat 509 Query: 415 gtggccgtagtcgcccgaagtacatgctgtagatggcctcgtagcggtcgccgttgcgct 474 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 gtggccgtagtcg-ccgaagtacatgctgtagatggcctcgtagcggtcgccgttgcgct 450 Query: 475 ccggcacgtgctggatcaggatgcagatccccgccgtgatcccgatccgcttgtccaggc 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 ccggcacgtgctggatcaggatgcagatccccgccgtgatcccgatccgcttgtccaggc 390 Query: 535 tcccgttgtacaccttgttggtgaaggggacgaggtcgccgagcgcgttctggctctggt 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 tcccgttgtacaccttgttggtgaaggggacgaggtcgccgagcgcgttctggctctggt 330 Query: 595 tggcgctcagccggaggtaggcggggctctcgcggtcgcgctcgttgagctcgtacacgt 654 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 tggcgctcagccggaggtaggcggggctctcgcggtcgcgctcgttgagctcgtacacgt 270 Query: 655 gcagctcctgcaccttgctc 674 |||||||||||||||||||| Sbjct: 269 gcagctcctgcaccttgctc 250
>ref|XM_468844.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1265 Score = 692 bits (349), Expect = 0.0 Identities = 485/529 (91%), Gaps = 1/529 (0%) Strand = Plus / Minus Query: 143 agctagtcagtgaagttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgtt 202 ||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 836 agctagttggtgaagttgttgaggcaggcgtggggctcggtggccttggcggctggcgtt 777 Query: 203 ggctcgacggtgggggaaggcgggacgggcgtgcagagcagctcctttggcaggtccggg 262 ||||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||| Sbjct: 776 ggctcgacggtcggggacggcgggacgggcgtgcagagcagctcccgcggcaggtcgggg 717 Query: 263 atgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttg 322 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 atgcccttgaggtagaaggtgtagaagatcttgaaggggaagacgatctggttgagcttg 657 Query: 323 acctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcc 382 ||||| |||||| |||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 656 acctggccgtaggcgccttcgaagacgccggagccgccggtgacggcgaggtaggactcc 597 Query: 383 tcgtaggtgaggtagggcccctgcaggctgatgtggccgtagtcgcccgaagtacatgct 442 |||||||| ||||| || ||||||| | |||||||||||||||| |||||||| | ||| Sbjct: 596 tcgtaggtcaggtacgggccctgcacggagatgtggccgtagtcg-ccgaagtagaagct 538 Query: 443 gtagatggcctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagat 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 gtagatggcctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagat 478 Query: 503 ccccgccgtgatcccgatccgcttgtccaggctcccgttgtacaccttgttggtgaaggg 562 |||||||| |||||| | ||||||||||||||| ||| |||||| ||||||||||||||| Sbjct: 477 ccccgccgagatccccagccgcttgtccaggcttccgctgtacagcttgttggtgaaggg 418 Query: 563 gacgaggtcgccgagcgcgttctggctctggttggcgctcagccggaggtaggcggggct 622 |||||| |||||||| ||||||| |||| |||||||| || ||||||||||||||||| Sbjct: 417 gacgagatcgccgagggcgttctccgtctgcttggcgctgaggcggaggtaggcggggct 358 Query: 623 ctcgcggtcgcgctcgttgagctcgtacacgtgcagctcctgcaccttg 671 |||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 357 ctcgcggtcgcgctcgttgatctcgtacacgaacatctcctgcaccttg 309
>emb|AJ493664.1|OSA493664 Oryza sativa mRNA for allene oxide cyclase (aoc gene) Length = 1171 Score = 692 bits (349), Expect = 0.0 Identities = 485/529 (91%), Gaps = 1/529 (0%) Strand = Plus / Minus Query: 143 agctagtcagtgaagttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgtt 202 ||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 811 agctagttggtgaagttgttgaggcaggcgtggggctcggtggccttggcggctggcgtt 752 Query: 203 ggctcgacggtgggggaaggcgggacgggcgtgcagagcagctcctttggcaggtccggg 262 ||||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||| Sbjct: 751 ggctcgacggtcggggacggcgggacgggcgtgcagagcagctcccgcggcaggtcgggg 692 Query: 263 atgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttg 322 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 691 atgcccttgaggtagaaggtgtagaagatcttgaaggggaagacgatctggttgagcttg 632 Query: 323 acctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcc 382 ||||| |||||| |||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 631 acctggccgtaggcgccttcgaagacgccggagccgccggtgacggcgaggtaggactcc 572 Query: 383 tcgtaggtgaggtagggcccctgcaggctgatgtggccgtagtcgcccgaagtacatgct 442 |||||||| ||||| || ||||||| | |||||||||||||||| |||||||| | ||| Sbjct: 571 tcgtaggtcaggtacgggccctgcacggagatgtggccgtagtcg-ccgaagtagaagct 513 Query: 443 gtagatggcctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagat 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 gtagatggcctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagat 453 Query: 503 ccccgccgtgatcccgatccgcttgtccaggctcccgttgtacaccttgttggtgaaggg 562 |||||||| |||||| | ||||||||||||||| ||| |||||| ||||||||||||||| Sbjct: 452 ccccgccgagatccccagccgcttgtccaggcttccgctgtacagcttgttggtgaaggg 393 Query: 563 gacgaggtcgccgagcgcgttctggctctggttggcgctcagccggaggtaggcggggct 622 |||||| |||||||| ||||||| |||| |||||||| || ||||||||||||||||| Sbjct: 392 gacgagatcgccgagggcgttctccgtctgcttggcgctgaggcggaggtaggcggggct 333 Query: 623 ctcgcggtcgcgctcgttgagctcgtacacgtgcagctcctgcaccttg 671 |||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 332 ctcgcggtcgcgctcgttgatctcgtacacgaacatctcctgcaccttg 284
>dbj|AK071443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091K18, full insert sequence Length = 1207 Score = 684 bits (345), Expect = 0.0 Identities = 484/529 (91%), Gaps = 1/529 (0%) Strand = Plus / Minus Query: 143 agctagtcagtgaagttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgtt 202 ||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 852 agctagttggtgaagttgttgaggcaggcgtggggctcggtggccttggcggctggcgtt 793 Query: 203 ggctcgacggtgggggaaggcgggacgggcgtgcagagcagctcctttggcaggtccggg 262 ||||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||| Sbjct: 792 ggctcgacggtcggggacggcgggacgggcgtgcagagcagctcccgcggcaggtcgggg 733 Query: 263 atgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttg 322 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 atgcccttgaggtagaaggtgtagaagatcttgaaggggaagacgatctggttgagcttg 673 Query: 323 acctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcc 382 ||||| |||||| |||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 672 acctggccgtaggcgccttcgaagacgccggagccgccggtgacggcgaggtaggactcc 613 Query: 383 tcgtaggtgaggtagggcccctgcaggctgatgtggccgtagtcgcccgaagtacatgct 442 |||||||| ||||| || ||||||| | |||||||||||||||| |||||||| | ||| Sbjct: 612 tcgtaggtcaggtacgggccctgcacggagatgtggccgtagtcg-ccgaagtagaagct 554 Query: 443 gtagatggcctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagat 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 gtagatggcctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagat 494 Query: 503 ccccgccgtgatcccgatccgcttgtccaggctcccgttgtacaccttgttggtgaaggg 562 |||||||| |||||| | ||||||||||||||| ||| |||||| ||||||||||||||| Sbjct: 493 ccccgccgagatccccagccgcttgtccaggcttccgctgtacagcttgttggtgaaggg 434 Query: 563 gacgaggtcgccgagcgcgttctggctctggttggcgctcagccggaggtaggcggggct 622 |||||| |||||||| ||||||| |||| |||||||| | ||||||||||||||||| Sbjct: 433 gacgagatcgccgagggcgttctccgtctgcttggcgctgatgcggaggtaggcggggct 374 Query: 623 ctcgcggtcgcgctcgttgagctcgtacacgtgcagctcctgcaccttg 671 |||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 373 ctcgcggtcgcgctcgttgatctcgtacacgaacatctcctgcaccttg 325
>dbj|AK060025.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B07, full insert sequence Length = 1059 Score = 684 bits (345), Expect = 0.0 Identities = 484/529 (91%), Gaps = 1/529 (0%) Strand = Plus / Minus Query: 143 agctagtcagtgaagttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgtt 202 ||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 741 agctagttggtgaagttgttgaggcaggcgtggggctcggtggccttggcggctggcgtt 682 Query: 203 ggctcgacggtgggggaaggcgggacgggcgtgcagagcagctcctttggcaggtccggg 262 ||||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||| Sbjct: 681 ggctcgacggtcggggacggcgggacgggcgtgcagagcagctcccgcggcaggtcgggg 622 Query: 263 atgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttg 322 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 atgcccttgaggtagaaggtgtagaagatcttgaaggggaagacgatctggttgagcttg 562 Query: 323 acctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcc 382 ||||| |||||| |||| ||||||||||||||||| || || |||||||||||||||||| Sbjct: 561 acctggccgtaggcgccttcgaagacgccggagccgccggtaacggcgaggtaggactcc 502 Query: 383 tcgtaggtgaggtagggcccctgcaggctgatgtggccgtagtcgcccgaagtacatgct 442 |||||||| ||||| || ||||||| | |||||||||||||||| |||||||| | ||| Sbjct: 501 tcgtaggtcaggtacgggccctgcacggagatgtggccgtagtcg-ccgaagtagaagct 443 Query: 443 gtagatggcctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagat 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 gtagatggcctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagat 383 Query: 503 ccccgccgtgatcccgatccgcttgtccaggctcccgttgtacaccttgttggtgaaggg 562 |||||||| |||||| | ||||||||||||||| ||| |||||| ||||||||||||||| Sbjct: 382 ccccgccgagatccccagccgcttgtccaggcttccgctgtacagcttgttggtgaaggg 323 Query: 563 gacgaggtcgccgagcgcgttctggctctggttggcgctcagccggaggtaggcggggct 622 |||||| |||||||| ||||||| |||| |||||||| || ||||||||||||||||| Sbjct: 322 gacgagatcgccgagggcgttctccgtctgcttggcgctgaggcggaggtaggcggggct 263 Query: 623 ctcgcggtcgcgctcgttgagctcgtacacgtgcagctcctgcaccttg 671 |||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 262 ctcgcggtcgcgctcgttgatctcgtacacgaacatctcctgcaccttg 214
>gb|AY488136.1| Zea mays allene oxide cyclase (aoc) mRNA, complete cds Length = 717 Score = 563 bits (284), Expect = e-157 Identities = 459/516 (88%), Gaps = 1/516 (0%) Strand = Plus / Minus Query: 156 agttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgttggctcgacggtgg 215 |||||| |||| ||||||| ||||||| |||| |||||||||| || ||||||||||||| Sbjct: 706 agttgtcgagggatgcgtgcggctcggcggccctggcggcgggggtgggctcgacggtgg 647 Query: 216 gggaaggcgggacgggcgtgcagagcagctcctttggcaggtccgggatgcccttgaggt 275 | || ||||||||||||||||||||||| ||| | |||||||||||||||||| ||||| Sbjct: 646 gcgacggcgggacgggcgtgcagagcaggtccctgggcaggtccgggatgccccggaggt 587 Query: 276 agaaagtgtagaagatcttgaaggggaagacgatctggttgagcttgacctgcccgtaga 335 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 586 agaaggtgtagaagatcttgaaggggaagacgatctggttgagcttgacctggccgtaga 527 Query: 336 cgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcctcgtaggtgaggt 395 |||||||||||||||||||||| || ||||| || ||||| |||||||||||||| |||| Sbjct: 526 cgccctcgaagacgccggagccgccggtgaccgccaggtacgactcctcgtaggtcaggt 467 Query: 396 agggcccctgcaggctgatgtggccgtagtcgcccgaagtacatgctgtagatggcctcg 455 | || ||||||| ||||||||||||||| |||||||| | |||||||||||||||| Sbjct: 466 acgggccctgcaccgagatgtggccgtagtc-tccgaagtagaagctgtagatggcctcg 408 Query: 456 tagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagatccccgccgtgatc 515 ||||||||||||||||| || || ||||||||||| || | |||||| ||||| |||| Sbjct: 407 tagcggtcgccgttgcggtcggggacgtgctggatgagcacgcagatgcccgcggtgacg 348 Query: 516 ccgatccgcttgtccaggctcccgttgtacaccttgttggtgaaggggacgaggtcgccg 575 || | ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 347 cccagccgcttgtccaggctgccgttgtacaccttgttggtgaaggggacgaggtcgccc 288 Query: 576 agcgcgttctggctctggttggcgctcagccggaggtaggcggggctctcgcggtcgcgc 635 |||||||||| |||| |||||||| || || ||||| ||||||||||||||||| ||| Sbjct: 287 agcgcgttctccgtctgcttggcgctgaggcgcaggtacgcggggctctcgcggtcccgc 228 Query: 636 tcgttgagctcgtacacgtgcagctcctgcaccttg 671 ||||||| ||||||||||| |||||||||||||||| Sbjct: 227 tcgttgatctcgtacacgtacagctcctgcaccttg 192
>gb|AY103942.1| Zea mays PCO144933 mRNA sequence Length = 1122 Score = 563 bits (284), Expect = e-157 Identities = 459/516 (88%), Gaps = 1/516 (0%) Strand = Plus / Minus Query: 156 agttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgttggctcgacggtgg 215 |||||| |||| ||||||| ||||||| |||| |||||||||| || ||||||||||||| Sbjct: 787 agttgtcgagggatgcgtgcggctcggcggccctggcggcgggggtgggctcgacggtgg 728 Query: 216 gggaaggcgggacgggcgtgcagagcagctcctttggcaggtccgggatgcccttgaggt 275 | || ||||||||||||||||||||||| ||| | |||||||||||||||||| ||||| Sbjct: 727 gcgacggcgggacgggcgtgcagagcaggtccctgggcaggtccgggatgccccggaggt 668 Query: 276 agaaagtgtagaagatcttgaaggggaagacgatctggttgagcttgacctgcccgtaga 335 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 667 agaaggtgtagaagatcttgaaggggaagacgatctggttgagcttgacctggccgtaga 608 Query: 336 cgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcctcgtaggtgaggt 395 |||||||||||||||||||||| || ||||| || ||||| |||||||||||||| |||| Sbjct: 607 cgccctcgaagacgccggagccgccggtgaccgccaggtacgactcctcgtaggtcaggt 548 Query: 396 agggcccctgcaggctgatgtggccgtagtcgcccgaagtacatgctgtagatggcctcg 455 | || ||||||| ||||||||||||||| |||||||| | |||||||||||||||| Sbjct: 547 acgggccctgcaccgagatgtggccgtagtc-tccgaagtagaagctgtagatggcctcg 489 Query: 456 tagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagatccccgccgtgatc 515 ||||||||||||||||| || || ||||||||||| || | |||||| ||||| |||| Sbjct: 488 tagcggtcgccgttgcggtcggggacgtgctggatgagcacgcagatgcccgcggtgacg 429 Query: 516 ccgatccgcttgtccaggctcccgttgtacaccttgttggtgaaggggacgaggtcgccg 575 || | ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 428 cccagccgcttgtccaggctgccgttgtacaccttgttggtgaaggggacgaggtcgccc 369 Query: 576 agcgcgttctggctctggttggcgctcagccggaggtaggcggggctctcgcggtcgcgc 635 |||||||||| |||| |||||||| || || ||||| ||||||||||||||||| ||| Sbjct: 368 agcgcgttctccgtctgcttggcgctgaggcgcaggtacgcggggctctcgcggtcccgc 309 Query: 636 tcgttgagctcgtacacgtgcagctcctgcaccttg 671 ||||||| ||||||||||| |||||||||||||||| Sbjct: 308 tcgttgatctcgtacacgtacagctcctgcaccttg 273
>gb|BT016725.1| Zea mays clone Contig558 mRNA sequence Length = 1071 Score = 555 bits (280), Expect = e-155 Identities = 458/516 (88%), Gaps = 1/516 (0%) Strand = Plus / Minus Query: 156 agttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgttggctcgacggtgg 215 |||||| |||| | ||||| ||||||| |||| |||||||||| || ||||||||||||| Sbjct: 761 agttgtcgagggaggcgtgcggctcggcggccctggcggcgggggtgggctcgacggtgg 702 Query: 216 gggaaggcgggacgggcgtgcagagcagctcctttggcaggtccgggatgcccttgaggt 275 | || ||||||||||||||||||||||| ||| |||||||||||||||| ||| ||||| Sbjct: 701 gcgacggcgggacgggcgtgcagagcaggtcccttggcaggtccgggattccccggaggt 642 Query: 276 agaaagtgtagaagatcttgaaggggaagacgatctggttgagcttgacctgcccgtaga 335 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 641 agaaggtgtagaagatcttgaaggggaagacgatctggttgagcttgacctggccgtata 582 Query: 336 cgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcctcgtaggtgaggt 395 |||||||||||||||||||||| || ||||| || ||||| |||||||||||||| |||| Sbjct: 581 cgccctcgaagacgccggagccgccggtgaccgccaggtacgactcctcgtaggtcaggt 522 Query: 396 agggcccctgcaggctgatgtggccgtagtcgcccgaagtacatgctgtagatggcctcg 455 | || ||||||| ||||||||||||||| |||||||| | |||||||||||||||| Sbjct: 521 acgggccctgcaccgagatgtggccgtagtc-tccgaagtagaagctgtagatggcctcg 463 Query: 456 tagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagatccccgccgtgatc 515 ||||||||||||||||| || || ||||||||||| || | |||||| ||||| |||| Sbjct: 462 tagcggtcgccgttgcggtcggggacgtgctggatgagcacgcagatgcccgcggtgacg 403 Query: 516 ccgatccgcttgtccaggctcccgttgtacaccttgttggtgaaggggacgaggtcgccg 575 || | ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 402 cccagccgcttgtccaggctgccgttgtacaccttgttggtgaaggggacgaggtcgccc 343 Query: 576 agcgcgttctggctctggttggcgctcagccggaggtaggcggggctctcgcggtcgcgc 635 |||||||||| |||| |||||||| || || ||||||||||||||||||||||| ||| Sbjct: 342 agcgcgttctccgtctgcttggcgctgaggcgcaggtaggcggggctctcgcggtcccgc 283 Query: 636 tcgttgagctcgtacacgtgcagctcctgcaccttg 671 ||||||| ||||||||||| |||||||||||||||| Sbjct: 282 tcgttgatctcgtacacgtacagctcctgcaccttg 247
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 547 bits (276), Expect = e-152 Identities = 373/404 (92%), Gaps = 1/404 (0%) Strand = Plus / Plus Query: 143 agctagtcagtgaagttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgtt 202 ||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 18298027 agctagttggtgaagttgttgaggcaggcgtggggctcggtggccttggcggctggcgtt 18298086 Query: 203 ggctcgacggtgggggaaggcgggacgggcgtgcagagcagctcctttggcaggtccggg 262 ||||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||| Sbjct: 18298087 ggctcgacggtcggggacggcgggacgggcgtgcagagcagctcccgcggcaggtcgggg 18298146 Query: 263 atgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttg 322 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 18298147 atgcccttgaggtagaaggtgtagaagatcttgaaggggaagacgatctggttgagcttg 18298206 Query: 323 acctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcc 382 ||||| |||||| |||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 18298207 acctggccgtaggcgccttcgaagacgccggagccgccggtgacggcgaggtaggactcc 18298266 Query: 383 tcgtaggtgaggtagggcccctgcaggctgatgtggccgtagtcgcccgaagtacatgct 442 |||||||| ||||| || ||||||| | |||||||||||||||| |||||||| | ||| Sbjct: 18298267 tcgtaggtcaggtacgggccctgcacggagatgtggccgtagtcg-ccgaagtagaagct 18298325 Query: 443 gtagatggcctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagat 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18298326 gtagatggcctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagat 18298385 Query: 503 ccccgccgtgatcccgatccgcttgtccaggctcccgttgtaca 546 |||||||| |||||| | ||||||||||||||| ||| |||||| Sbjct: 18298386 ccccgccgagatccccagccgcttgtccaggcttccgctgtaca 18298429 Score = 155 bits (78), Expect = 2e-34 Identities = 114/126 (90%) Strand = Plus / Plus Query: 546 accttgttggtgaaggggacgaggtcgccgagcgcgttctggctctggttggcgctcagc 605 ||||||||||||||||||||||| |||||||| ||||||| |||| |||||||| || Sbjct: 18298526 accttgttggtgaaggggacgagatcgccgagggcgttctccgtctgcttggcgctgagg 18298585 Query: 606 cggaggtaggcggggctctcgcggtcgcgctcgttgagctcgtacacgtgcagctcctgc 665 ||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||| Sbjct: 18298586 cggaggtaggcggggctctcgcggtcgcgctcgttgatctcgtacacgaacatctcctgc 18298645 Query: 666 accttg 671 |||||| Sbjct: 18298646 accttg 18298651
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 547 bits (276), Expect = e-152 Identities = 373/404 (92%), Gaps = 1/404 (0%) Strand = Plus / Plus Query: 143 agctagtcagtgaagttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgtt 202 ||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 64458 agctagttggtgaagttgttgaggcaggcgtggggctcggtggccttggcggctggcgtt 64517 Query: 203 ggctcgacggtgggggaaggcgggacgggcgtgcagagcagctcctttggcaggtccggg 262 ||||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||| Sbjct: 64518 ggctcgacggtcggggacggcgggacgggcgtgcagagcagctcccgcggcaggtcgggg 64577 Query: 263 atgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttg 322 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 64578 atgcccttgaggtagaaggtgtagaagatcttgaaggggaagacgatctggttgagcttg 64637 Query: 323 acctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcc 382 ||||| |||||| |||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 64638 acctggccgtaggcgccttcgaagacgccggagccgccggtgacggcgaggtaggactcc 64697 Query: 383 tcgtaggtgaggtagggcccctgcaggctgatgtggccgtagtcgcccgaagtacatgct 442 |||||||| ||||| || ||||||| | |||||||||||||||| |||||||| | ||| Sbjct: 64698 tcgtaggtcaggtacgggccctgcacggagatgtggccgtagtcg-ccgaagtagaagct 64756 Query: 443 gtagatggcctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagat 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64757 gtagatggcctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagat 64816 Query: 503 ccccgccgtgatcccgatccgcttgtccaggctcccgttgtaca 546 |||||||| |||||| | ||||||||||||||| ||| |||||| Sbjct: 64817 ccccgccgagatccccagccgcttgtccaggcttccgctgtaca 64860 Score = 155 bits (78), Expect = 2e-34 Identities = 114/126 (90%) Strand = Plus / Plus Query: 546 accttgttggtgaaggggacgaggtcgccgagcgcgttctggctctggttggcgctcagc 605 ||||||||||||||||||||||| |||||||| ||||||| |||| |||||||| || Sbjct: 64957 accttgttggtgaaggggacgagatcgccgagggcgttctccgtctgcttggcgctgagg 65016 Query: 606 cggaggtaggcggggctctcgcggtcgcgctcgttgagctcgtacacgtgcagctcctgc 665 ||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||| Sbjct: 65017 cggaggtaggcggggctctcgcggtcgcgctcgttgatctcgtacacgaacatctcctgc 65076 Query: 666 accttg 671 |||||| Sbjct: 65077 accttg 65082
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 547 bits (276), Expect = e-152 Identities = 373/404 (92%), Gaps = 1/404 (0%) Strand = Plus / Plus Query: 143 agctagtcagtgaagttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgtt 202 ||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 18292027 agctagttggtgaagttgttgaggcaggcgtggggctcggtggccttggcggctggcgtt 18292086 Query: 203 ggctcgacggtgggggaaggcgggacgggcgtgcagagcagctcctttggcaggtccggg 262 ||||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||| Sbjct: 18292087 ggctcgacggtcggggacggcgggacgggcgtgcagagcagctcccgcggcaggtcgggg 18292146 Query: 263 atgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttg 322 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 18292147 atgcccttgaggtagaaggtgtagaagatcttgaaggggaagacgatctggttgagcttg 18292206 Query: 323 acctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcc 382 ||||| |||||| |||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 18292207 acctggccgtaggcgccttcgaagacgccggagccgccggtgacggcgaggtaggactcc 18292266 Query: 383 tcgtaggtgaggtagggcccctgcaggctgatgtggccgtagtcgcccgaagtacatgct 442 |||||||| ||||| || ||||||| | |||||||||||||||| |||||||| | ||| Sbjct: 18292267 tcgtaggtcaggtacgggccctgcacggagatgtggccgtagtcg-ccgaagtagaagct 18292325 Query: 443 gtagatggcctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagat 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18292326 gtagatggcctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagat 18292385 Query: 503 ccccgccgtgatcccgatccgcttgtccaggctcccgttgtaca 546 |||||||| |||||| | ||||||||||||||| ||| |||||| Sbjct: 18292386 ccccgccgagatccccagccgcttgtccaggcttccgctgtaca 18292429 Score = 155 bits (78), Expect = 2e-34 Identities = 114/126 (90%) Strand = Plus / Plus Query: 546 accttgttggtgaaggggacgaggtcgccgagcgcgttctggctctggttggcgctcagc 605 ||||||||||||||||||||||| |||||||| ||||||| |||| |||||||| || Sbjct: 18292526 accttgttggtgaaggggacgagatcgccgagggcgttctccgtctgcttggcgctgagg 18292585 Query: 606 cggaggtaggcggggctctcgcggtcgcgctcgttgagctcgtacacgtgcagctcctgc 665 ||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||| Sbjct: 18292586 cggaggtaggcggggctctcgcggtcgcgctcgttgatctcgtacacgaacatctcctgc 18292645 Query: 666 accttg 671 |||||| Sbjct: 18292646 accttg 18292651
>gb|AY154776.1| Physcomitrella patens allene oxide cyclase (aoc) mRNA, complete cds Length = 958 Score = 107 bits (54), Expect = 5e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 272 aggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttgacctgcccg 331 |||||||| |||||||||| |||||||||||||| |||||||| ||||| |||| ||| Sbjct: 598 aggtagaacgtgtagaagagcttgaaggggaagatgatctggtgcagcttcgcctgaccg 539 Query: 332 tagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcctcgtaggtg 391 ||| |||| |||||| || |||||||| |||| |||||||| || |||||||| ||| Sbjct: 538 tagcagcccgcgaagatccccgagcctcccgtgatcgcgaggtacgagtcctcgtatgtg 479 Query: 392 aggtagggcccctgcaggctgatgtggccgtagtcgcc 429 | ||| |||||||| | | |||||||||||||||||| Sbjct: 478 atgtatggcccctgaacggagatgtggccgtagtcgcc 441 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 627 cggtcgcgctcgttgagctcgtacacgtgcagctcctgcac 667 ||||||||||| |||| ||||||||| |||||||||||| Sbjct: 226 cggtcgcgctcattgatctcgtacacaaacagctcctgcac 186
>emb|AJ508993.1|PPA508993 Physcomitrella patens mRNA for allene oxide cyclase (aoc1 gene) Length = 779 Score = 107 bits (54), Expect = 5e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 272 aggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttgacctgcccg 331 |||||||| |||||||||| |||||||||||||| |||||||| ||||| |||| ||| Sbjct: 506 aggtagaacgtgtagaagagcttgaaggggaagatgatctggtgcagcttcgcctgaccg 447 Query: 332 tagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcctcgtaggtg 391 ||| |||| |||||| || |||||||| |||| |||||||| || |||||||| ||| Sbjct: 446 tagcagcccgcgaagatccccgagcctcccgtgatcgcgaggtacgagtcctcgtatgtg 387 Query: 392 aggtagggcccctgcaggctgatgtggccgtagtcgcc 429 | ||| |||||||| | | |||||||||||||||||| Sbjct: 386 atgtatggcccctgaacggagatgtggccgtagtcgcc 349 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 627 cggtcgcgctcgttgagctcgtacacgtgcagctcctgcac 667 ||||||||||| |||| ||||||||| |||||||||||| Sbjct: 134 cggtcgcgctcattgatctcgtacacaaacagctcctgcac 94
>gb|DQ314585.1| Ipomoea nil chloroplast allene oxide cyclase precursor (AOC) mRNA, complete cds; nuclear gene for chloroplast product Length = 856 Score = 95.6 bits (48), Expect = 2e-16 Identities = 175/216 (81%), Gaps = 1/216 (0%) Strand = Plus / Minus Query: 251 ggcaggtccgggatgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatc 310 ||||| || ||||| ||||| | ||||||||||||||| | |||||| ||||| | || | Sbjct: 660 ggcagatcagggattcccttcaagtagaaagtgtagaacagcttgaacgggaaaatgagc 601 Query: 311 tggttgagcttgacctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcg 370 || | |||||||||||| ||| |||| || ||||||| || || || || ||||| || Sbjct: 600 tgctggagcttgacctgaccggagactccttcgaagatcccagatccgccggtgaccgcc 541 Query: 371 aggtaggactcctcgtaggtgaggtagggcccctgcaggctgatgtggccgtagtcgccc 430 | |||| ||||||||||||||||| | ||||| | | |||||||||||||||| || Sbjct: 540 aaataggtgtcctcgtaggtgaggtattgtccctgaacggcgatgtggccgtagtcg-cc 482 Query: 431 gaagtacatgctgtagatggcctcgtagcggtcgcc 466 |||||| | ||||||||| |||||||| |||||||| Sbjct: 481 gaagtagaagctgtagatcgcctcgtaacggtcgcc 446 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 627 cggtcgcgctcgttgagctcgtacacg 653 |||||||||||||||| |||||||||| Sbjct: 288 cggtcgcgctcgttgatctcgtacacg 262
>gb|AY644677.1| Humulus lupulus plastid allene oxide cyclase mRNA, complete cds; nuclear gene for plastid product Length = 768 Score = 58.0 bits (29), Expect = 4e-05 Identities = 45/49 (91%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 415 gtggccgtagtcgcccgaagtacatgctgtagatggcctcgtagcggtc 463 ||||||||||||||| |||||| | |||||||||||||||||| ||||| Sbjct: 495 gtggccgtagtcgcc-gaagtagaagctgtagatggcctcgtaccggtc 448 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 aaagtgtagaagatcttgaaggggaaga 305 ||||||||||| | |||||||||||||| Sbjct: 632 aaagtgtagaaaagcttgaaggggaaga 605
>gb|AY687338.1| Humulus lupulus allene oxide cyclase C1 mRNA, complete cds Length = 1099 Score = 50.1 bits (25), Expect = 0.010 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 415 gtggccgtagtcgcccgaagtacatgctgtagatggcctcgtagcggtc 463 ||||||||||||||| |||||| | ||||||||||||||| || ||||| Sbjct: 579 gtggccgtagtcgcc-gaagtagaagctgtagatggcctcataccggtc 532 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 aaagtgtagaagatcttgaaggggaaga 305 ||||||||||| | |||||||||||||| Sbjct: 716 aaagtgtagaaaagcttgaaggggaaga 689
>gb|AF311437.2|AH010657S2 Comamonas testosteroni plasmid pTSA incP1beta region, partial sequence and transposon Tntsa, complete sequence Length = 38756 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 306 cgatctggttgagcttgacctg 327 |||||||||||||||||||||| Sbjct: 26867 cgatctggttgagcttgacctg 26888
>gb|AY687339.1| Humulus lupulus allene oxide cyclase C4 mRNA, complete cds Length = 1093 Score = 44.1 bits (22), Expect = 0.59 Identities = 58/70 (82%) Strand = Plus / Minus Query: 278 aaagtgtagaagatcttgaaggggaagacgatctggttgagcttgacctgcccgtagacg 337 ||||||||||| | |||||| ||||||| || ||||| ||||| ||||| ||| |||| Sbjct: 718 aaagtgtagaaaagcttgaaagggaagatgagctggtgcagcttcacctggccggagacc 659 Query: 338 ccctcgaaga 347 || ||||||| Sbjct: 658 ccttcgaaga 649
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 652 cgtgcagctcctgcaccttgc 672 ||||||||||||||||||||| Sbjct: 161578 cgtgcagctcctgcaccttgc 161598
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 642 agctcgtacacgtgcagctcctgca 666 |||||||||||||||||| |||||| Sbjct: 3613816 agctcgtacacgtgcagcgcctgca 3613840 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 451 cctcgtagcggtcgccgttgcgctc 475 |||||||||||||||||| |||||| Sbjct: 910661 cctcgtagcggtcgccgtcgcgctc 910637
>ref|XM_524142.1| PREDICTED: Pan troglodytes similar to Olfactory receptor 10H2 (LOC468755), mRNA Length = 948 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 agatggcctcgtagcggtcg 464 |||||||||||||||||||| Sbjct: 379 agatggcctcgtagcggtcg 360
>ref|XM_482852.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2096 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 gacgaggtcgccgagcgcgt 582 |||||||||||||||||||| Sbjct: 626 gacgaggtcgccgagcgcgt 607
>ref|XM_507264.1| PREDICTED Oryza sativa (japonica cultivar-group), P0104B02.35 mRNA Length = 2284 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 gacgaggtcgccgagcgcgt 582 |||||||||||||||||||| Sbjct: 814 gacgaggtcgccgagcgcgt 795
>ref|XM_612436.2| PREDICTED: Bos taurus similar to ets variant gene 4 (E1A enhancer binding protein, E1AF), transcript variant 1 (LOC533129), mRNA Length = 2196 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 607 ggaggtaggcggggctctcg 626 |||||||||||||||||||| Sbjct: 1480 ggaggtaggcggggctctcg 1461
>ref|XM_879937.1| PREDICTED: Bos taurus similar to ets variant gene 4 (E1A enhancer binding protein, E1AF), transcript variant 4 (LOC533129), mRNA Length = 2200 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 607 ggaggtaggcggggctctcg 626 |||||||||||||||||||| Sbjct: 1484 ggaggtaggcggggctctcg 1465
>ref|XM_867264.1| PREDICTED: Bos taurus similar to ets variant gene 4 (E1A enhancer binding protein, E1AF), transcript variant 2 (LOC533129), mRNA Length = 2352 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 607 ggaggtaggcggggctctcg 626 |||||||||||||||||||| Sbjct: 1636 ggaggtaggcggggctctcg 1617
>ref|XM_879886.1| PREDICTED: Bos taurus similar to ets variant gene 4 (E1A enhancer binding protein, E1AF), transcript variant 3 (LOC533129), mRNA Length = 2034 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 607 ggaggtaggcggggctctcg 626 |||||||||||||||||||| Sbjct: 1318 ggaggtaggcggggctctcg 1299
>emb|CR457459.9| Zebrafish DNA sequence from clone DKEY-25P11 in linkage group 12, complete sequence Length = 206901 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gagcagctcctttggcaggt 257 |||||||||||||||||||| Sbjct: 78596 gagcagctcctttggcaggt 78615
>gb|AY135641.1| Solanum tuberosum allene oxide cyclase mRNA, complete cds; nuclear gene for chloroplast product Length = 741 Score = 40.1 bits (20), Expect = 9.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 250 tggcaggtccgggatgcccttgaggtagaaagtgtagaagatcttgaaggggaaga 305 |||||| || ||||| ||||| | ||| ||||||||||| | |||||| ||||||| Sbjct: 642 tggcagatcggggatccccttcaagtaaaaagtgtagaatagcttgaaagggaaga 587
>gb|AC127308.3| Mus musculus BAC clone RP23-293B20 from 8, complete sequence Length = 211878 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 tgaggtagggcccctgcagg 409 |||||||||||||||||||| Sbjct: 76528 tgaggtagggcccctgcagg 76547
>emb|AL161901.18| Human DNA sequence from clone RP11-521H3 on chromosome 13 Contains a novel gene and a eukaryotic translation initiation factor 4A, variant 1 (EIF4A1) pseudogene, complete sequence Length = 150054 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 atgcccttgaggtagaaagt 282 |||||||||||||||||||| Sbjct: 139797 atgcccttgaggtagaaagt 139778
>gb|AE005907.1| Caulobacter crescentus CB15 section 233 of 359 of the complete genome Length = 8390 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 cccgatccgcttgtccaggc 534 |||||||||||||||||||| Sbjct: 4893 cccgatccgcttgtccaggc 4912 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 cccgatccgcttgtccaggc 534 |||||||||||||||||||| Sbjct: 2317 cccgatccgcttgtccaggc 2336
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 ggggacgaggtcgccgagcg 579 |||||||||||||||||||| Sbjct: 128306 ggggacgaggtcgccgagcg 128325
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 gacgaggtcgccgagcgcgt 582 |||||||||||||||||||| Sbjct: 16768532 gacgaggtcgccgagcgcgt 16768513
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 gacgaggtcgccgagcgcgt 582 |||||||||||||||||||| Sbjct: 22965335 gacgaggtcgccgagcgcgt 22965316
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0047B10 Length = 158798 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 gacgaggtcgccgagcgcgt 582 |||||||||||||||||||| Sbjct: 117226 gacgaggtcgccgagcgcgt 117207
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0104B02 Length = 169588 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 gacgaggtcgccgagcgcgt 582 |||||||||||||||||||| Sbjct: 139173 gacgaggtcgccgagcgcgt 139154
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 gacgaggtcgccgagcgcgt 582 |||||||||||||||||||| Sbjct: 25063 gacgaggtcgccgagcgcgt 25044
>dbj|AK119595.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D09, full insert sequence Length = 2284 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 gacgaggtcgccgagcgcgt 582 |||||||||||||||||||| Sbjct: 814 gacgaggtcgccgagcgcgt 795
>ref|XM_310728.2| Anopheles gambiae str. PEST ENSANGP00000010003 (ENSANGG00000007514), partial mRNA Length = 1533 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 649 acacgtgcagctcctgcacc 668 |||||||||||||||||||| Sbjct: 913 acacgtgcagctcctgcacc 894
>dbj|AK106796.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-B04, full insert sequence Length = 2096 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 gacgaggtcgccgagcgcgt 582 |||||||||||||||||||| Sbjct: 626 gacgaggtcgccgagcgcgt 607
>dbj|AB037929.2| Bruguiera sexangula mang-1 mRNA for mangrin, complete cds Length = 1019 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 gtagaaagtgtagaagatcttgaa 297 ||||||||||||||||| |||||| Sbjct: 683 gtagaaagtgtagaagagcttgaa 660 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,904,010 Number of Sequences: 3902068 Number of extensions: 3904010 Number of successful extensions: 74748 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 42 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74467 Number of HSP's gapped (non-prelim): 263 length of query: 675 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 652 effective length of database: 17,143,297,704 effective search space: 11177430103008 effective search space used: 11177430103008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
