ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags32c04 |
|---|---|
| Clone Library Name | barley_pub |
>ASNS_ORYSA (Q43011) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 590 Score = 171 bits (433), Expect(3) = 1e-66 Identities = 83/100 (83%), Positives = 91/100 (91%), Gaps = 2/100 (2%) Frame = -3 Query: 489 SFVYPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDP 310 SFVYPENTP TKEAYYYRT+FEKF+PKNAARLTVPGGPSVACSTAKAVEWDAAWSK LDP Sbjct: 481 SFVYPENTPVTKEAYYYRTIFEKFFPKNAARLTVPGGPSVACSTAKAVEWDAAWSKNLDP 540 Query: 309 SGRAALGVHDAAYEE--EKAPASVDPILENAFRSPAHGES 196 SGRAALGVHDAAYE+ +K+PAS +P+L+N F PA GES Sbjct: 541 SGRAALGVHDAAYEDTLQKSPASANPVLDNGF-GPALGES 579 Score = 88.2 bits (217), Expect(3) = 1e-66 Identities = 40/48 (83%), Positives = 40/48 (83%) Frame = -2 Query: 619 PIYPKHILYRQKEQFSDGVGYSWIDGLKDHANAHVSDSMMTNAKLCLP 476 P PKHILYRQKEQFSDGVGYSWIDGLKDHAN HVSDSMM NA P Sbjct: 438 PYLPKHILYRQKEQFSDGVGYSWIDGLKDHANEHVSDSMMMNASFVYP 485 Score = 35.0 bits (79), Expect(3) = 1e-66 Identities = 14/15 (93%), Positives = 15/15 (100%) Frame = -1 Query: 650 LRNAFDDDEKPYLPK 606 LRNAFDD+EKPYLPK Sbjct: 428 LRNAFDDEEKPYLPK 442
>ASNS2_PEA (P19252) Asparagine synthetase, root [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 582 Score = 133 bits (334), Expect(3) = 5e-51 Identities = 58/72 (80%), Positives = 67/72 (93%) Frame = -3 Query: 483 VYPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDPSG 304 ++P NTP TKEAYYYR +FE+F+P+N+ARLTVPGGP+VACSTAKAVEWDAAWS LDPSG Sbjct: 483 IFPHNTPNTKEAYYYRMIFERFFPQNSARLTVPGGPTVACSTAKAVEWDAAWSNNLDPSG 542 Query: 303 RAALGVHDAAYE 268 RAALGVHD+AYE Sbjct: 543 RAALGVHDSAYE 554 Score = 78.2 bits (191), Expect(3) = 5e-51 Identities = 36/49 (73%), Positives = 38/49 (77%) Frame = -2 Query: 622 SPIYPKHILYRQKEQFSDGVGYSWIDGLKDHANAHVSDSMMTNAKLCLP 476 +P PKHILYRQKEQFSDGVGYSWIDGLK HA HV+D MM NA P Sbjct: 437 NPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAKHVTDKMMLNAGNIFP 485 Score = 30.8 bits (68), Expect(3) = 5e-51 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = -1 Query: 650 LRNAFDDDEKPYLPK 606 LR AFDD+E PYLPK Sbjct: 428 LRKAFDDEENPYLPK 442
>ASNS_ASPOF (P31752) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (AS) Length = 589 Score = 132 bits (332), Expect(3) = 8e-51 Identities = 56/72 (77%), Positives = 66/72 (91%) Frame = -3 Query: 483 VYPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDPSG 304 +YP NTPTTKEAYYYR +FE+F+P+N+AR TVPGGPS+ACSTAKA+EWDA WS LDPSG Sbjct: 483 IYPHNTPTTKEAYYYRMIFERFFPQNSARFTVPGGPSIACSTAKAIEWDARWSNNLDPSG 542 Query: 303 RAALGVHDAAYE 268 RAALGVHD+AY+ Sbjct: 543 RAALGVHDSAYD 554 Score = 78.2 bits (191), Expect(3) = 8e-51 Identities = 36/49 (73%), Positives = 38/49 (77%) Frame = -2 Query: 622 SPIYPKHILYRQKEQFSDGVGYSWIDGLKDHANAHVSDSMMTNAKLCLP 476 +P PKHILYRQKEQFSDGVGYSWIDGLK HA HV+D MM NA P Sbjct: 437 NPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAKHVTDRMMLNAARIYP 485 Score = 30.8 bits (68), Expect(3) = 8e-51 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = -1 Query: 650 LRNAFDDDEKPYLPK 606 LR AFDD+E PYLPK Sbjct: 428 LRKAFDDEENPYLPK 442
>ASNS1_PEA (P19251) Asparagine synthetase, nodule [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 585 Score = 129 bits (324), Expect(3) = 4e-50 Identities = 57/81 (70%), Positives = 69/81 (85%) Frame = -3 Query: 489 SFVYPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDP 310 S ++P NTP TKEAYYYR +FE+F+P+N+ARLTVPGGPSVACST KA+EWDA+WS LDP Sbjct: 482 SHIFPFNTPNTKEAYYYRMIFERFFPQNSARLTVPGGPSVACSTEKAIEWDASWSNNLDP 541 Query: 309 SGRAALGVHDAAYEEEKAPAS 247 SGRAALGVH +AYE + P + Sbjct: 542 SGRAALGVHVSAYEHQINPVT 562 Score = 79.0 bits (193), Expect(3) = 4e-50 Identities = 35/49 (71%), Positives = 38/49 (77%) Frame = -2 Query: 622 SPIYPKHILYRQKEQFSDGVGYSWIDGLKDHANAHVSDSMMTNAKLCLP 476 +P PKHILYRQKEQFSDGVGY WIDG+KDHA HV+D MM NA P Sbjct: 438 NPYLPKHILYRQKEQFSDGVGYGWIDGIKDHAAKHVTDRMMFNASHIFP 486 Score = 30.8 bits (68), Expect(3) = 4e-50 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = -1 Query: 650 LRNAFDDDEKPYLPK 606 LR AFDD+E PYLPK Sbjct: 429 LRKAFDDEENPYLPK 443
>ASNS2_LOTJA (P49093) Asparagine synthetase [glutamine-hydrolyzing] 2 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 2) Length = 585 Score = 128 bits (321), Expect(3) = 4e-50 Identities = 55/76 (72%), Positives = 68/76 (89%) Frame = -3 Query: 489 SFVYPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDP 310 S +YP NTP TKEAYYYR +FE+F+P+N+ARL+VPGG S+ACST KA+EWDAAWS LDP Sbjct: 481 SNIYPFNTPNTKEAYYYRMIFERFFPQNSARLSVPGGASIACSTEKAIEWDAAWSNNLDP 540 Query: 309 SGRAALGVHDAAYEEE 262 SGRAALGVHD+AY+++ Sbjct: 541 SGRAALGVHDSAYDDQ 556 Score = 80.1 bits (196), Expect(3) = 4e-50 Identities = 36/49 (73%), Positives = 38/49 (77%) Frame = -2 Query: 622 SPIYPKHILYRQKEQFSDGVGYSWIDGLKDHANAHVSDSMMTNAKLCLP 476 +P PKHILYRQKEQFSDGVGY WIDGLKDHA HV+D MM NA P Sbjct: 437 NPYLPKHILYRQKEQFSDGVGYGWIDGLKDHAAKHVTDKMMLNASNIYP 485 Score = 30.8 bits (68), Expect(3) = 4e-50 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = -1 Query: 650 LRNAFDDDEKPYLPK 606 LR AFDD+E PYLPK Sbjct: 428 LRKAFDDEENPYLPK 442
>ASNS1_LOTJA (P49092) Asparagine synthetase [glutamine-hydrolyzing] 1 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 1) Length = 585 Score = 125 bits (315), Expect(3) = 1e-49 Identities = 55/75 (73%), Positives = 68/75 (90%) Frame = -3 Query: 483 VYPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDPSG 304 ++ NTP TKEAYYYR +FE+F+P+N+ARLTVPGGP+VACSTAKAVEWDAAWS LDPSG Sbjct: 483 IFRHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGPTVACSTAKAVEWDAAWSNNLDPSG 542 Query: 303 RAALGVHDAAYEEEK 259 RAALGVH +AY++++ Sbjct: 543 RAALGVHLSAYDDKQ 557 Score = 79.0 bits (193), Expect(3) = 1e-49 Identities = 35/43 (81%), Positives = 37/43 (86%) Frame = -2 Query: 619 PIYPKHILYRQKEQFSDGVGYSWIDGLKDHANAHVSDSMMTNA 491 P PKHILYRQKEQFSDGVGYSWIDGLKDHA HV+D M+ NA Sbjct: 438 PYLPKHILYRQKEQFSDGVGYSWIDGLKDHAAKHVTDKMILNA 480 Score = 32.7 bits (73), Expect(3) = 1e-49 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = -1 Query: 650 LRNAFDDDEKPYLPK 606 LR AFDD+EKPYLPK Sbjct: 428 LRRAFDDEEKPYLPK 442
>ASNS_TRIVS (O24661) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 585 Score = 127 bits (318), Expect(3) = 2e-49 Identities = 55/72 (76%), Positives = 64/72 (88%) Frame = -3 Query: 483 VYPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDPSG 304 ++P NTPTTKE YYYR +FE+F+P+N+A+LTVPGGPSVACSTA AV WDA+WSK LDPSG Sbjct: 483 IFPHNTPTTKEGYYYRMIFERFFPQNSAKLTVPGGPSVACSTATAVAWDASWSKNLDPSG 542 Query: 303 RAALGVHDAAYE 268 RAA GVHD AYE Sbjct: 543 RAATGVHDLAYE 554 Score = 78.6 bits (192), Expect(3) = 2e-49 Identities = 36/48 (75%), Positives = 37/48 (77%) Frame = -2 Query: 619 PIYPKHILYRQKEQFSDGVGYSWIDGLKDHANAHVSDSMMTNAKLCLP 476 P PKHILYRQKEQFSDGVGYSWIDGLK HA HV+D MM NA P Sbjct: 438 PYLPKHILYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMLNAGHIFP 485 Score = 31.6 bits (70), Expect(3) = 2e-49 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = -1 Query: 650 LRNAFDDDEKPYLPK 606 LR AFDD+E+PYLPK Sbjct: 428 LRKAFDDEERPYLPK 442
>ASNS_ARATH (P49078) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 583 Score = 125 bits (315), Expect(3) = 3e-49 Identities = 53/83 (63%), Positives = 70/83 (84%) Frame = -3 Query: 483 VYPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDPSG 304 ++P NTP TKEAYYYR +FE+F+P+N+ARLTVPGG +VACSTAKAVEWDA+WS +DPSG Sbjct: 483 IFPHNTPNTKEAYYYRMIFERFFPQNSARLTVPGGATVACSTAKAVEWDASWSNNMDPSG 542 Query: 303 RAALGVHDAAYEEEKAPASVDPI 235 RAA+GVH +AY+ + ++ P+ Sbjct: 543 RAAIGVHLSAYDGKNVALTIPPL 565 Score = 79.0 bits (193), Expect(3) = 3e-49 Identities = 36/48 (75%), Positives = 39/48 (81%) Frame = -2 Query: 619 PIYPKHILYRQKEQFSDGVGYSWIDGLKDHANAHVSDSMMTNAKLCLP 476 P PKHILYRQKEQFSDGVGYSWIDGLKDHA +V+D MM+NA P Sbjct: 438 PYLPKHILYRQKEQFSDGVGYSWIDGLKDHAAQNVNDKMMSNAGHIFP 485 Score = 31.6 bits (70), Expect(3) = 3e-49 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = -1 Query: 650 LRNAFDDDEKPYLPK 606 LR AFDD+E+PYLPK Sbjct: 428 LRRAFDDEERPYLPK 442
>ASNS_BRAOL (P49091) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 585 Score = 125 bits (315), Expect(3) = 4e-48 Identities = 54/77 (70%), Positives = 68/77 (88%) Frame = -3 Query: 489 SFVYPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDP 310 +F++P NTP TKEAYYYR +FE+F+P+N+ARLTVPGG +VACSTAKAVEWDA+WS +DP Sbjct: 482 AFIFPHNTPLTKEAYYYRMIFERFFPQNSARLTVPGGATVACSTAKAVEWDASWSNNMDP 541 Query: 309 SGRAALGVHDAAYEEEK 259 SGRAA+GVH +AY+ K Sbjct: 542 SGRAAIGVHLSAYDGSK 558 Score = 75.1 bits (183), Expect(3) = 4e-48 Identities = 34/48 (70%), Positives = 37/48 (77%) Frame = -2 Query: 619 PIYPKHILYRQKEQFSDGVGYSWIDGLKDHANAHVSDSMMTNAKLCLP 476 P PKHILYRQKEQFSDGVGYSWIDGLK HA +V+D MM+ A P Sbjct: 439 PYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAENVNDKMMSKAAFIFP 486 Score = 31.6 bits (70), Expect(3) = 4e-48 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = -1 Query: 650 LRNAFDDDEKPYLPK 606 LR AFDD+E+PYLPK Sbjct: 429 LRRAFDDEERPYLPK 443
>ASNS_SANAU (O24338) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 524 Score = 77.0 bits (188), Expect(3) = 5e-26 Identities = 35/49 (71%), Positives = 38/49 (77%) Frame = -2 Query: 622 SPIYPKHILYRQKEQFSDGVGYSWIDGLKDHANAHVSDSMMTNAKLCLP 476 +P PKHILYRQKEQFSDGVGYSWIDGLK H+ HV+D MM NA P Sbjct: 437 NPYLPKHILYRQKEQFSDGVGYSWIDGLKAHSALHVTDKMMLNAAHIYP 485 Score = 49.7 bits (117), Expect(3) = 5e-26 Identities = 18/25 (72%), Positives = 23/25 (92%) Frame = -3 Query: 483 VYPENTPTTKEAYYYRTVFEKFYPK 409 +YP NTPTTKEAYYYR +FE+F+P+ Sbjct: 483 IYPHNTPTTKEAYYYRMIFERFFPQ 507 Score = 30.8 bits (68), Expect(3) = 5e-26 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = -1 Query: 650 LRNAFDDDEKPYLPK 606 LR AFDD+E PYLPK Sbjct: 428 LRRAFDDEENPYLPK 442
>ASNB_ECOLI (P22106) Asparagine synthetase B [glutamine-hydrolyzing] (EC| 6.3.5.4) Length = 553 Score = 99.0 bits (245), Expect = 1e-20 Identities = 46/77 (59%), Positives = 60/77 (77%) Frame = -3 Query: 498 QTPSFVYPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKL 319 +T F +P NTPT+KEAY YR +FE+ +P +A VPGGPSVACS+AKA+EWD A+ K+ Sbjct: 478 ETARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIEWDEAFKKM 537 Query: 318 LDPSGRAALGVHDAAYE 268 DPSGR A+GVH +AY+ Sbjct: 538 DDPSGR-AVGVHQSAYK 553 Score = 55.1 bits (131), Expect = 2e-07 Identities = 27/56 (48%), Positives = 34/56 (60%) Frame = -2 Query: 610 PKHILYRQKEQFSDGVGYSWIDGLKDHANAHVSDSMMTNAKLCLP*KHTHNKRSLL 443 P + +RQKEQFSDGVGYSWID LK+ A VSD + A+ P +K + L Sbjct: 441 PASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNTPTSKEAYL 496
>ASNS_MAIZE (P49094) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 585 Score = 87.4 bits (215), Expect(2) = 2e-20 Identities = 44/94 (46%), Positives = 59/94 (62%) Frame = -3 Query: 483 VYPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDPSG 304 ++P NTP KEAYYYR +FE+ +P+++AR TVP GPS+ACST A+EW W DPSG Sbjct: 483 MFPYNTPVNKEAYYYRMIFERLFPQDSARETVPWGPSIACSTPAAIEWVEQWKASNDPSG 542 Query: 303 RAALGVHDAAYEEEKAPASVDPILENAFRSPAHG 202 R + HD+A + A + P A PA+G Sbjct: 543 R-FISSHDSAATDHTAVSRRWP---TAAARPANG 572 Score = 72.0 bits (175), Expect = 1e-12 Identities = 34/57 (59%), Positives = 37/57 (64%) Frame = -2 Query: 619 PIYPKHILYRQKEQFSDGVGYSWIDGLKDHANAHVSDSMMTNAKLCLP*KHTHNKRS 449 P PKHILYRQKEQFSDGVGY+WIDGLK V+D MM NA P NK + Sbjct: 438 PYLPKHILYRQKEQFSDGVGYNWIDGLKSFTEQQVTDEMMNNAAQMFPYNTPVNKEA 494 Score = 31.2 bits (69), Expect(2) = 2e-20 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = -1 Query: 650 LRNAFDDDEKPYLPK 606 +R AFDDDE PYLPK Sbjct: 428 MRKAFDDDEHPYLPK 442
>ASNS2_YEAST (P49090) Asparagine synthetase [glutamine-hydrolyzing] 2 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 2) Length = 571 Score = 65.5 bits (158), Expect(2) = 3e-16 Identities = 29/44 (65%), Positives = 34/44 (77%) Frame = -2 Query: 619 PIYPKHILYRQKEQFSDGVGYSWIDGLKDHANAHVSDSMMTNAK 488 P P+ IL+RQKEQFSDGVGYSWIDGL+D A +SD+M N K Sbjct: 466 PYLPEEILWRQKEQFSDGVGYSWIDGLRDTAERAISDAMFANPK 509 Score = 39.3 bits (90), Expect(2) = 3e-16 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Frame = -3 Query: 492 PSFVYPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEW--DAAWSKL 319 P + ++ PTTKEAY+YR F+ ++P+ A TV + W A W Sbjct: 508 PKADWGDDIPTTKEAYWYRLKFDAWFPQKTAADTV-------------MRWIPKADWGCA 554 Query: 318 LDPSGRAA 295 DPSGR A Sbjct: 555 EDPSGRYA 562
>ASNS1_YEAST (P49089) Asparagine synthetase [glutamine-hydrolyzing] 1 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 1) Length = 571 Score = 65.9 bits (159), Expect(2) = 2e-15 Identities = 30/44 (68%), Positives = 34/44 (77%) Frame = -2 Query: 619 PIYPKHILYRQKEQFSDGVGYSWIDGLKDHANAHVSDSMMTNAK 488 P P+ IL+RQKEQFSDGVGYSWIDGLKD A A +SD M + K Sbjct: 467 PYLPEEILWRQKEQFSDGVGYSWIDGLKDTAEAVISDEMFASPK 510 Score = 35.8 bits (81), Expect(2) = 2e-15 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Frame = -3 Query: 495 TPSFVYPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEW--DAAWSK 322 +P + + PTTKEA++YR F+ +P+ TV + W A W Sbjct: 508 SPKAEWGSDIPTTKEAFWYRLKFDALFPQKTVADTV-------------MRWIPKADWGC 554 Query: 321 LLDPSGRAA 295 DPSGR A Sbjct: 555 AEDPSGRYA 563
>ASNS_SCHPO (P78753) Probable asparagine synthetase [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 556 Score = 57.4 bits (137), Expect(2) = 1e-13 Identities = 26/37 (70%), Positives = 29/37 (78%) Frame = -2 Query: 619 PIYPKHILYRQKEQFSDGVGYSWIDGLKDHANAHVSD 509 P P+ IL+RQKEQFSDGVGYSWID LKD A +SD Sbjct: 453 PYLPQDILWRQKEQFSDGVGYSWIDALKDTAELCISD 489 Score = 38.1 bits (87), Expect(2) = 1e-13 Identities = 24/73 (32%), Positives = 35/73 (47%) Frame = -3 Query: 492 PSFVYPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLD 313 P + ++ PTTKEA++YR +F++ +P+ A + P A W D Sbjct: 495 PRREWGDDIPTTKEAFWYRKLFDEIFPRQCADTVMRWVPK------------AEWGCPED 542 Query: 312 PSGRAALGVHDAA 274 PSGR G H AA Sbjct: 543 PSGRYQAG-HVAA 554
>ASNS_CRIGR (P19891) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 45.4 bits (106), Expect(2) = 1e-10 Identities = 26/69 (37%), Positives = 29/69 (42%) Frame = -3 Query: 480 YPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDPSGR 301 +P NTP TKE YYYR +FE+ YP A LT W W DPS R Sbjct: 504 FPFNTPKTKEGYYYRQIFERHYPGRADWLT--------------HYWMPKWINATDPSAR 549 Query: 300 AALGVHDAA 274 AA Sbjct: 550 TLTHYKSAA 558 Score = 40.0 bits (92), Expect(2) = 1e-10 Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = -2 Query: 622 SPIYPKHILYRQKEQFSDG---VGYSWIDGLKDHANAHVSDSMMTNAKLCLP 476 S + PK IL+R KE FSDG V SW L+D+ V D MM A P Sbjct: 454 SNLLPKEILWRPKEAFSDGITSVKNSWFKILQDYVEHQVDDEMMATAAQKFP 505
>ASNS_PONPY (Q5R6W9) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 43.5 bits (101), Expect(2) = 2e-10 Identities = 24/60 (40%), Positives = 27/60 (45%) Frame = -3 Query: 480 YPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDPSGR 301 +P NTP TKE YYYR VFE+ YP A L + W W DPS R Sbjct: 504 FPFNTPKTKEGYYYRQVFERHYPGRADWL--------------SHYWMPKWINATDPSAR 549 Score = 41.2 bits (95), Expect(2) = 2e-10 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Frame = -2 Query: 622 SPIYPKHILYRQKEQFSDG---VGYSWIDGLKDHANAHVSDSMMTNAKLCLP 476 S + PK IL+R KE FSDG V SW L+++ V D+MM NA P Sbjct: 454 SNLIPKEILWRPKEAFSDGITSVKNSWFKILQEYVEHQVDDAMMANAAQKFP 505
>ASNS_HUMAN (P08243) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) (Cell cycle control protein TS11) Length = 560 Score = 43.5 bits (101), Expect(2) = 2e-10 Identities = 24/60 (40%), Positives = 27/60 (45%) Frame = -3 Query: 480 YPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDPSGR 301 +P NTP TKE YYYR VFE+ YP A L + W W DPS R Sbjct: 504 FPFNTPKTKEGYYYRQVFERHYPGRADWL--------------SHYWMPKWINATDPSAR 549 Score = 41.2 bits (95), Expect(2) = 2e-10 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Frame = -2 Query: 622 SPIYPKHILYRQKEQFSDG---VGYSWIDGLKDHANAHVSDSMMTNAKLCLP 476 S + PK IL+R KE FSDG V SW L+++ V D+MM NA P Sbjct: 454 SNLIPKEILWRPKEAFSDGITSVKNSWFKILQEYVEHQVDDAMMANAAQKFP 505
>ASNS_RAT (P49088) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 43.5 bits (101), Expect(2) = 5e-10 Identities = 24/60 (40%), Positives = 26/60 (43%) Frame = -3 Query: 480 YPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDPSGR 301 +P NTP TKE YYYR +FE YP A LT W W DPS R Sbjct: 504 FPFNTPQTKEGYYYRQIFEHHYPGRADWLT--------------HYWMPKWINATDPSAR 549 Score = 40.0 bits (92), Expect(2) = 5e-10 Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Frame = -2 Query: 622 SPIYPKHILYRQKEQFSDG---VGYSWIDGLKDHANAHVSDSMMTNAKLCLP 476 S + PK IL+R KE FSDG V SW L+D V D+MM+ A P Sbjct: 454 SNLLPKEILWRPKEAFSDGITSVKNSWFKILQDFVEHQVDDAMMSEASQKFP 505
>ASNS_MOUSE (Q61024) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 43.9 bits (102), Expect(2) = 6e-10 Identities = 25/69 (36%), Positives = 29/69 (42%) Frame = -3 Query: 480 YPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDPSGR 301 +P NTP TKE Y+YR +FE+ YP A LT W W DPS R Sbjct: 504 FPFNTPKTKEGYFYRQIFERHYPGRADWLT--------------HYWMPKWINATDPSAR 549 Query: 300 AALGVHDAA 274 AA Sbjct: 550 TLTHYKSAA 558 Score = 39.3 bits (90), Expect(2) = 6e-10 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Frame = -2 Query: 616 IYPKHILYRQKEQFSDG---VGYSWIDGLKDHANAHVSDSMMTNAKLCLP 476 + PK IL+R KE FSDG V SW L+D+ V D MM+ A P Sbjct: 456 LLPKEILWRPKEAFSDGITSVKNSWFKILQDYVEHQVDDEMMSAASQKFP 505
>ASNS_MESAU (P17714) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 42.7 bits (99), Expect(2) = 6e-10 Identities = 25/69 (36%), Positives = 28/69 (40%) Frame = -3 Query: 480 YPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDPSGR 301 +P NTP TKE Y+YR +FE YP A LT W W DPS R Sbjct: 504 FPFNTPKTKEGYFYRQIFEHHYPGRADWLT--------------HYWMPKWINATDPSAR 549 Query: 300 AALGVHDAA 274 AA Sbjct: 550 TLTHYKSAA 558 Score = 40.4 bits (93), Expect(2) = 6e-10 Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Frame = -2 Query: 622 SPIYPKHILYRQKEQFSDG---VGYSWIDGLKDHANAHVSDSMMTNAKLCLP 476 S + PK IL+R KE FSDG V SW L+D+ V D+MM A P Sbjct: 454 SNLLPKEILWRPKEAFSDGITSVKNSWFKILQDYVEHQVDDAMMATAAQKFP 505
>ASNS_CHICK (Q5ZJU3) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 43.5 bits (101), Expect = 5e-04 Identities = 23/60 (38%), Positives = 28/60 (46%) Frame = -3 Query: 480 YPENTPTTKEAYYYRTVFEKFYPKNAARLTVPGGPSVACSTAKAVEWDAAWSKLLDPSGR 301 YP N P TKE+YYYR +FEK YP ++ L W W + DPS R Sbjct: 504 YPFNPPRTKESYYYRQIFEKHYPGRSSWL--------------PHYWMPRWVEATDPSAR 549 Score = 37.7 bits (86), Expect = 0.030 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Frame = -2 Query: 622 SPIYPKHILYRQKEQFSDGVG---YSWIDGLKDHANAHVSDSMMTNAKLCLP*KHTHNKR 452 S + PK IL+R KE FSDG+ SW L+D+ + V D ++ A P K Sbjct: 454 SNLLPKEILWRPKEAFSDGIASVKKSWFSILQDYIDQQVDDLLLEKAAEKYPFNPPRTKE 513 Query: 451 S 449 S Sbjct: 514 S 514
>ASNS_MIMIV (Q5UQE1) Probable asparagine synthetase [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 549 Score = 27.3 bits (59), Expect(2) = 0.11 Identities = 11/22 (50%), Positives = 12/22 (54%) Frame = -3 Query: 480 YPENTPTTKEAYYYRTVFEKFY 415 Y N P KEA YYR +F Y Sbjct: 498 YKFNKPEIKEALYYRDIFNSHY 519 Score = 27.3 bits (59), Expect(2) = 0.11 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Frame = -2 Query: 610 PKHILYRQKEQFSDGVG---YSWIDGLKDHANAHVSDSMMTNA 491 P++ILYR KE FSD V +W ++ +D + N+ Sbjct: 454 PENILYRPKEAFSDAVSSKEINWYRSIQKITEEIYTDEKLQNS 496
>LYST_MOUSE (P97412) Lysosomal trafficking regulator (Beige protein) (CHS1| homolog) Length = 3788 Score = 32.3 bits (72), Expect = 1.3 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%) Frame = -1 Query: 392 RCQEVPALH--AAPRKLLNGTPPGPSSSTRLAVLLSVCMTQHTK---RKRLPHRSIPSWR 228 +C P LH + +L+ PPG +S L +L +++ K R+ P+R + SW Sbjct: 1386 QCLTFPFLHTPSLSNGVLSQKPPGILNSKALGLLRRARISRGKKEADRESFPYRLLSSWH 1445 Query: 227 MPSVHQPM 204 + +H P+ Sbjct: 1446 IAPIHLPL 1453
>PCD16_HUMAN (Q96JQ0) Protocadherin-16 precursor (Dachsous 1) (Cadherin-19)| (Fibroblast cadherin 1) Length = 3298 Score = 30.8 bits (68), Expect = 3.6 Identities = 21/70 (30%), Positives = 28/70 (40%) Frame = +2 Query: 191 RVLSPWAGERKAFSKMGSTDAGAFSSSYAASCTPRAARPDGSRSLDQAASHSTAFAVLHA 370 R + P A R S GS + A S S++ S +P AAR A S + + Sbjct: 3227 RAIFPPASHRSPISHEGSLSSAAMSPSFSPSLSPLAARSPVVSPFGVAQGPSASALSAES 3286 Query: 371 TLGPPGTVSL 400 L PP L Sbjct: 3287 GLEPPDDTEL 3296
>LYST_HUMAN (Q99698) Lysosomal trafficking regulator (Beige homolog)| Length = 3801 Score = 30.4 bits (67), Expect = 4.8 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%) Frame = -1 Query: 377 PALHAAPRKLLNGTP----PGPSSSTRLAVLLSVCMTQHTK---RKRLPHRSIPSWRMPS 219 P LHA L NG PG +S + +L +++ K R+ PHR + SW + Sbjct: 1398 PLLHAP--NLSNGVSSQKYPGILNSKAMGLLRRARVSRSKKEADRESFPHRLLSSWHIAP 1455 Query: 218 VHQPM 204 VH P+ Sbjct: 1456 VHLPL 1460
>DDL_THEMA (P46805) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 303 Score = 30.0 bits (66), Expect = 6.2 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +2 Query: 302 RPDGSRSLDQAASHSTAFAVLHATLGPPGTV-SLAAFLG*NFSNT 433 R D + +DQ S F VLH T G GT+ ++ FLG ++ + Sbjct: 41 REDFLKKVDQLKSFDVVFNVLHGTFGEDGTLQAILDFLGIRYTGS 85
>LDLR_HUMAN (P01130) Low-density lipoprotein receptor precursor (LDL receptor)| Length = 860 Score = 29.6 bits (65), Expect = 8.1 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 10/86 (11%) Frame = +1 Query: 283 MHTESSTARRVEELG--PGGVP--------FNSFRGAACNAGTSWHRQPSSILGIKLLKY 432 + T+ +T R V + PG P S + AG ++PSS+ + ++ Sbjct: 736 VRTQHTTTRPVPDTSRLPGATPGLTTVEIVTMSHQALGDVAGRGNEKKPSSVRALSIV-- 793 Query: 433 CPIIVGFFCCGCVFRVNKAWRLSSWN 510 PI++ F C VF + K WRL + N Sbjct: 794 LPIVLLVFLCLGVFLLWKNWRLKNIN 819 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,929,408 Number of Sequences: 219361 Number of extensions: 2095451 Number of successful extensions: 6268 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 6001 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6261 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
