>CI005_HUMAN (Q9H330) Protein C9orf5 (Protein CG-2)|
          Length = 911

 Score = 67.0 bits (162), Expect = 5e-11
 Identities = 38/129 (29%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
 Frame = -1

Query: 642  TWLLLKFFKVHFVYTATVFTIISALFPILPAWLSSIFAAAQL-LTEGRYVLAVMVTVIHL 466
            TWL    F ++ V+  +    I    P L  + +++ A   L LT+G    A+++ + HL
Sbjct: 725  TWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAILLLIFHL 784

Query: 465  VIMDYGTTVIQEDIPGY-NGYLTGLSIIGGMTLFPNALEGAILGPLIMTVVIALKNLYTE 289
            +   +  T I  DI G  + YLTGL++ GG       LEGAI+GP+++ +++   N+Y+ 
Sbjct: 785  LPTYFVDTAIYSDISGGGHPYLTGLAVAGGAYYL--GLEGAIIGPILLCILVVASNIYSA 842

Query: 288  FVLADTEEM 262
             +++ T  +
Sbjct: 843  MLVSPTNSV 851

>YA00_PYRHO (O58728) Hypothetical UPF0118 protein PH1000|
          Length = 355

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
 Frame = -1

Query: 645 LTWLLLKFFKVHFVYTATVFTIISALFPILPAWLSSIFAAAQLLTEGRYVLAVMVTVIHL 466
           L +L+ K   +     A + T++ +  P+   W+  +  A  L+ +G  +  + + V   
Sbjct: 226 LGFLIFKVSNLPTAILAGLLTVLFSFIPLFEGWMIWLAGAFYLVKQGHIIAGIGLAV--- 282

Query: 465 VIMDYGTTVIQEDIPGY-------------NGYLTGLSIIGGMTLFPNALEGAILGPLIM 325
               YG T++   +P +             N  L  + +IGG   +   L+G I+GP+++
Sbjct: 283 ----YGFTLVSP-LPDFTIRPKLVAREAEFNDVLVLIGMIGGT--WGLGLKGLIIGPIVL 335

Query: 324 TVVIAL 307
            V I +
Sbjct: 336 NVAIEM 341

>Y1800_ARCFU (O28474) Hypothetical UPF0118 protein AF1800|
          Length = 340

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
 Frame = -1

Query: 624 FFKVHFVYTATVFTIISALFPILPAWLSSIFAAAQLLTE--GRYVLAVMVTVIHLVIMDY 451
           +F V F    +    ++AL PI   W+  +  +  LL    GR +  +++ V+ L ++  
Sbjct: 214 YFNVPFAPLLSGLMFLAALIPIFAEWMIILPVSLYLLLVDVGRGLSFLLIGVVFLYVLP- 272

Query: 450 GTTVIQEDIPGYNGYLTGL----SIIGGMTLFPNALEGAILGPLIMTVVIALKNLYTEFV 283
              +++    GY   +  L    + IGG  +    + G  + P+I+ +  A+ N YT+  
Sbjct: 273 -ELILRPYFVGYTSKIHPLVLMLAFIGGGLV--GGISGFFIAPMIVGLATAIYNYYTKEE 329

Query: 282 LA 277
           LA
Sbjct: 330 LA 331

>GSPF_AERHY (P31743) General secretion pathway protein F|
          Length = 388

 Score = 33.5 bits (75), Expect = 0.56
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
 Frame = -3

Query: 484 GNSDTPCDHGLWNHS--HSGGYTWVQWVSDWPKHNWWHD------VISQCSRGCNT 341
           G S+    +GLW       GG+ W  W++D  +   WH       VI + SRG NT
Sbjct: 198 GTSELMQHYGLWFLLLLFIGGFVWRWWLTDEKRRRHWHQVVLRLPVIGRVSRGLNT 253

>YBP2_YEAST (P53169) YAP1-binding protein 2|
          Length = 641

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
 Frame = +1

Query: 1   LIILYNFCINXQRANPMHIKTD-LSENPIDIKLHHKEGKITRRNESQLMQYLV------Y 159
           L I+YNFC N   A P    TD +S N ++ K+H  E  + ++  + L  +++      +
Sbjct: 199 LRIVYNFCTNYSPAQPSASLTDGISTNDLE-KIHDDESALQKKLLANLSVFVISNCLKNH 257

Query: 160 PGMVQR 177
           PG + +
Sbjct: 258 PGNIDK 263

>YQOB_CAEEL (Q09300) Hypothetical protein EEED8.11 precursor|
          Length = 304

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
 Frame = -3

Query: 520 AADGREIC---TRGYGNSDTPCDHG-----LWNHSHSGGYTWVQWVSDWPKHNWWHDVIS 365
           A DGR I    +R  G  D+   +G     + +   S G+TW +W ++ P  N W   I 
Sbjct: 186 AVDGRRIAACVSRDRGILDSEECNGTNSFVMVDKHTSPGFTWSKWATNEPSANAWTYDIE 245

Query: 364 QC 359
           QC
Sbjct: 246 QC 247

>ITB8_RABIT (P26013) Integrin beta-8 precursor|
          Length = 768

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 11/45 (24%)
 Frame = -3

Query: 616 GAFCVHS-----------NCVYNHQCTFPNTTSMAVLDICRSAAA 515
           G FC H            NCV   QC  P+  S A+LD CR++ A
Sbjct: 621 GRFCEHCPTCPTACSENWNCV---QCLHPHNLSQAILDQCRTSCA 662

>RETST_HUMAN (Q6NUM9) All-trans-retinol 13,14-reductase precursor (EC 1.3.99.23)|
           (All-trans-13,14-dihydroretinol saturase) (RetSat)
          Length = 610

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
 Frame = -1

Query: 621 FKVHFVYTATVFTIISALFPILPAWLSSIFAAAQLLTEGRYVLAVMVTVIHLVIMDYGT- 445
           FK  FV  +   +++  LFP L   + S+ A + L  +  + LA      +    D G  
Sbjct: 489 FKNSFVEAS--MSVVLKLFPQLEGKVESVTAGSPLTNQ--FYLAAPRGACYGADHDLGRL 544

Query: 444 -----TVIQEDIPGYNGYLTGLSIIGGMTLFPNALEGAILGPLIMTVVIALKNLYTEFVL 280
                  ++   P  N YLTG  I      F   L GA+ G L+ +  I  +NLY++   
Sbjct: 545 HPCVMASLRAQSPIPNLYLTGQDI------FTCGLVGALQGALLCSSAILKRNLYSDLKN 598

Query: 279 ADT 271
            D+
Sbjct: 599 LDS 601


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,365,567
Number of Sequences: 219361
Number of extensions: 2579329
Number of successful extensions: 7116
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7112
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6086476506
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)