ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags32b16 |
|---|---|
| Clone Library Name | barley_pub |
>VPP4_HUMAN (Q9HBG4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 840 Score = 81.6 bits (200), Expect = 2e-15 Identities = 43/79 (54%), Positives = 52/79 (65%), Gaps = 3/79 (3%) Frame = -2 Query: 641 SELSTVFYEKLL---LFAWGYDSLIFKLVGLIVFAFATAFILLGMESLSAFLHALRLHWV 471 ++LS V + ++ L G+ ++ + VFA T ILL ME LSAFLHALRLHWV Sbjct: 752 AQLSEVLWTMVMNSGLQTRGWGGIVGVFIIFAVFAVLTVAILLIMEGLSAFLHALRLHWV 811 Query: 470 EFMNKFYHGDGYKFKPFSF 414 EF NKFY GDGYKF PFSF Sbjct: 812 EFQNKFYVGDGYKFSPFSF 830
>VPP2_HUMAN (Q9Y487) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (TJ6) Length = 856 Score = 79.0 bits (193), Expect = 1e-14 Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 3/83 (3%) Frame = -2 Query: 641 SELSTVFYEKLLLFAWGYDS---LIFKLVGLIVFAFATAFILLGMESLSAFLHALRLHWV 471 ++LS V + L+ D+ ++ L + +FA T FILL ME LSAFLHA+RLHWV Sbjct: 764 AQLSDVLWAMLMRVGLRVDTTYGVLLLLPVIALFAVLTIFILLIMEGLSAFLHAIRLHWV 823 Query: 470 EFMNKFYHGDGYKFKPFSFALLA 402 EF NKFY G G KF PFSF+LL+ Sbjct: 824 EFQNKFYVGAGTKFVPFSFSLLS 846
>VPP4_MOUSE (Q920R6) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 833 Score = 78.6 bits (192), Expect = 1e-14 Identities = 44/84 (52%), Positives = 52/84 (61%), Gaps = 3/84 (3%) Frame = -2 Query: 641 SELSTVFYEKLL---LFAWGYDSLIFKLVGLIVFAFATAFILLGMESLSAFLHALRLHWV 471 +ELS V + ++ L G+ L+ + VFA T ILL ME LSAFLHALRLHWV Sbjct: 745 AELSEVLWTMVMSIGLRLQGWAGLVGVFIIFAVFAVLTVAILLVMEGLSAFLHALRLHWV 804 Query: 470 EFMNKFYHGDGYKFKPFSFALLAE 399 EF NKFY G G KF PFSF + E Sbjct: 805 EFQNKFYEGAGSKFSPFSFKHVLE 828
>VPP2_MOUSE (P15920) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7) Length = 856 Score = 78.6 bits (192), Expect = 1e-14 Identities = 45/83 (54%), Positives = 54/83 (65%), Gaps = 3/83 (3%) Frame = -2 Query: 641 SELSTVFYEKLLLFAWGYDSLIFKLVGLIVFAF---ATAFILLGMESLSAFLHALRLHWV 471 ++LS V + L+ D+ L+ L V AF T FILL ME LSAFLHA+RLHWV Sbjct: 764 AQLSDVLWAMLMRVGLRVDTTYGVLLLLPVMAFFAVLTIFILLVMEGLSAFLHAIRLHWV 823 Query: 470 EFMNKFYHGDGYKFKPFSFALLA 402 EF NKFY G G KF PFSF+LL+ Sbjct: 824 EFQNKFYVGAGTKFVPFSFSLLS 846
>VPP2_BOVIN (O97681) Vacuolar proton translocating ATPase 116 kDa subunit A| isoform 2 (V-ATPase 116-kDa isoform a2) Length = 854 Score = 78.2 bits (191), Expect = 2e-14 Identities = 46/83 (55%), Positives = 53/83 (63%), Gaps = 3/83 (3%) Frame = -2 Query: 641 SELSTVFYEKLLLFAWGYDSLIFKLVGLIVFAF---ATAFILLGMESLSAFLHALRLHWV 471 ++LS V + L+ D+ LV L V AF T FILL ME LSAFLHA+RLHWV Sbjct: 764 AQLSEVLWAMLMHVGLRVDTAYGVLVLLPVIAFFAVLTIFILLIMEGLSAFLHAIRLHWV 823 Query: 470 EFMNKFYHGDGYKFKPFSFALLA 402 EF NKFY G G KF PFSF LL+ Sbjct: 824 EFQNKFYVGAGTKFVPFSFRLLS 846
>VPP1_PONPY (Q5R422) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) Length = 837 Score = 77.8 bits (190), Expect = 3e-14 Identities = 40/61 (65%), Positives = 44/61 (72%), Gaps = 6/61 (9%) Frame = -2 Query: 563 GLIVFAFATAF------ILLGMESLSAFLHALRLHWVEFMNKFYHGDGYKFKPFSFALLA 402 GL++F F TAF ILL ME LSAFLHALRLHWVEF NKFY G G+KF PFSF + Sbjct: 772 GLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIR 831 Query: 401 E 399 E Sbjct: 832 E 832
>VPP1_HUMAN (Q93050) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 837 Score = 77.8 bits (190), Expect = 3e-14 Identities = 40/61 (65%), Positives = 44/61 (72%), Gaps = 6/61 (9%) Frame = -2 Query: 563 GLIVFAFATAF------ILLGMESLSAFLHALRLHWVEFMNKFYHGDGYKFKPFSFALLA 402 GL++F F TAF ILL ME LSAFLHALRLHWVEF NKFY G G+KF PFSF + Sbjct: 772 GLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIR 831 Query: 401 E 399 E Sbjct: 832 E 832
>VPP1_CAEEL (P30628) Probable vacuolar proton translocating ATPase 116 kDa| subunit a (Uncoordinated protein 32) Length = 905 Score = 77.8 bits (190), Expect = 3e-14 Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 4/88 (4%) Frame = -2 Query: 641 SELSTVFYEKLLLFAW---GYDSLIFKLVGLIVFAFATAFILLGMESLSAFLHALRLHWV 471 ++LS V + + A+ GY I + +F + FIL+ ME LSAFLHALRLHWV Sbjct: 813 AQLSDVLWTMVFRNAFVLDGYTGAIATYILFFIFGSLSVFILVLMEGLSAFLHALRLHWV 872 Query: 470 EFMNKFYHGDGYKFKPFSF-ALLAEDEE 390 EF +KFY G GY+F PFSF +LAE+ E Sbjct: 873 EFQSKFYGGLGYEFAPFSFEKILAEERE 900
>VPP1_BOVIN (Q29466) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 838 Score = 74.3 bits (181), Expect = 3e-13 Identities = 44/84 (52%), Positives = 52/84 (61%), Gaps = 3/84 (3%) Frame = -2 Query: 641 SELSTVFYEKLLLFAWGYDSLIFKLVGLIVFA-FAT--AFILLGMESLSAFLHALRLHWV 471 ++LS V + ++ SL L +FA FAT ILL ME LSAFLHALRLHWV Sbjct: 750 AQLSEVLWTMVIHIGLKVKSLAGGLALFFIFAAFATLTVAILLIMEGLSAFLHALRLHWV 809 Query: 470 EFMNKFYHGDGYKFKPFSFALLAE 399 EF NKFY G G+KF PFSF + E Sbjct: 810 EFQNKFYSGTGFKFLPFSFEHIRE 833
>VPP3_HUMAN (Q13488) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 3 (V-ATPase 116-kDa isoform a3) (Osteoclastic proton pump 116 kDa subunit) (OC-116 kDa) (OC116) (T-cell immune regulator 1) (T cell immune response cDNA7 protein) (TIRC7) Length = 830 Score = 74.3 bits (181), Expect = 3e-13 Identities = 35/47 (74%), Positives = 36/47 (76%) Frame = -2 Query: 551 FAFATAFILLGMESLSAFLHALRLHWVEFMNKFYHGDGYKFKPFSFA 411 FA T ILL ME LSAFLHALRLHWVEF NKFY G GYK PF+FA Sbjct: 780 FAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGTGYKLSPFTFA 826
>VPP1_RAT (P25286) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase su Length = 838 Score = 73.6 bits (179), Expect = 5e-13 Identities = 36/51 (70%), Positives = 38/51 (74%) Frame = -2 Query: 551 FAFATAFILLGMESLSAFLHALRLHWVEFMNKFYHGDGYKFKPFSFALLAE 399 FA T ILL ME LSAFLHALRLHWVEF NKFY G G+KF PFSF + E Sbjct: 783 FATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYTGTGFKFLPFSFEHIRE 833
>VPP1_MOUSE (Q9Z1G4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 839 Score = 73.6 bits (179), Expect = 5e-13 Identities = 36/51 (70%), Positives = 38/51 (74%) Frame = -2 Query: 551 FAFATAFILLGMESLSAFLHALRLHWVEFMNKFYHGDGYKFKPFSFALLAE 399 FA T ILL ME LSAFLHALRLHWVEF NKFY G G+KF PFSF + E Sbjct: 784 FATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYTGTGFKFLPFSFEHIRE 834
>VPH1_SCHPO (O13742) Probable vacuolar ATP synthase 91 kDa subunit (Vacuolar| ATPase 91 kDa subunit) Length = 805 Score = 68.9 bits (167), Expect = 1e-11 Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 3/84 (3%) Frame = -2 Query: 641 SELSTVFYEKLLLFAWGYDSLIFKLVGLIVFAF---ATAFILLGMESLSAFLHALRLHWV 471 ++LS+V + L + ++ + +I+F F AT +L+ ME SA LH+LRLHWV Sbjct: 722 NQLSSVLWNMTLANGFRMTGIVGSIFVVILFGFWFIATCVVLVAMEGTSAMLHSLRLHWV 781 Query: 470 EFMNKFYHGDGYKFKPFSFALLAE 399 E M+K + G+GY F PF+F + AE Sbjct: 782 EGMSKHFEGEGYAFTPFTFKVTAE 805
>STV1_YEAST (P37296) Vacuolar ATP synthase subunit a, Golgi isoform (EC 3.6.3.14)| (V-ATPase 101 kDa subunit) (V-ATPase subunit AC115) (Similar to VPH1 protein 1) Length = 890 Score = 66.6 bits (161), Expect = 6e-11 Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 6/87 (6%) Frame = -2 Query: 641 SELSTVFYEKLLLFAW-----GYDSLIFKLVGLIVFAFA-TAFILLGMESLSAFLHALRL 480 ++LS+V ++ + A+ G + K+V L F T IL+ ME SA LHALRL Sbjct: 804 AQLSSVLWDMTISNAFSSKNSGSPLAVMKVVFLFAMWFVLTVCILVFMEGTSAMLHALRL 863 Query: 479 HWVEFMNKFYHGDGYKFKPFSFALLAE 399 HWVE M+KF+ G+GY ++PFSF + E Sbjct: 864 HWVEAMSKFFEGEGYAYEPFSFRAIIE 890
>VPH1_YEAST (P32563) Vacuolar ATP synthase subunit a, vacuolar isoform (EC| 3.6.3.14) (V-ATPase a subunit) (Vacuolar proton pump a subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) Length = 839 Score = 63.5 bits (153), Expect = 5e-10 Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 3/79 (3%) Frame = -2 Query: 641 SELSTVFYEKLLLFAWGYDSLI--FKLVGLIVFAFA-TAFILLGMESLSAFLHALRLHWV 471 ++LS+V + + A+G+ + F V L FA T +L+ ME SA LH+LRLHWV Sbjct: 743 AQLSSVLWTMTIQIAFGFRGFVGVFMTVALFAMWFALTCAVLVLMEGTSAMLHSLRLHWV 802 Query: 470 EFMNKFYHGDGYKFKPFSF 414 E M+KF+ G+G ++PF+F Sbjct: 803 ESMSKFFVGEGLPYEPFAF 821
>VPH1_NEUCR (Q01290) Vacuolar ATP synthase 98 kDa subunit (Vacuolar ATPase 98 kDa| subunit) Length = 856 Score = 56.2 bits (134), Expect = 8e-08 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 3/86 (3%) Frame = -2 Query: 638 ELSTVFYEKLL---LFAWGYDSLIFKLVGLIVFAFATAFILLGMESLSAFLHALRLHWVE 468 +LS V + + L + G IF +V +F + IL+ ME +SA LH+LRL WVE Sbjct: 764 QLSAVLWSMTMAKALESKGLGGAIFLVVAFAMFFVLSVIILIIMEGVSAMLHSLRLAWVE 823 Query: 467 FMNKFYHGDGYKFKPFSFALLAEDEE 390 +KF G+ F PFSF E+ E Sbjct: 824 SFSKFAEFGGWPFTPFSFKQQLEESE 849
>VATI_PYRKO (Q5JDS2) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 663 Score = 53.9 bits (128), Expect = 4e-07 Identities = 24/50 (48%), Positives = 34/50 (68%) Frame = -2 Query: 569 LVGLIVFAFATAFILLGMESLSAFLHALRLHWVEFMNKFYHGDGYKFKPF 420 ++GLI+F F + +L AF+HALRLH+VEF FY G+G +F+PF Sbjct: 602 IIGLIIF-FGGQLFSTAINALGAFVHALRLHYVEFFGTFYSGEGKRFEPF 650
>VATI_PYRHO (O57721) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 659 Score = 51.2 bits (121), Expect = 3e-06 Identities = 24/51 (47%), Positives = 34/51 (66%) Frame = -2 Query: 569 LVGLIVFAFATAFILLGMESLSAFLHALRLHWVEFMNKFYHGDGYKFKPFS 417 L+G++V F + +L AF+HALRLH+VEF FY G+G KF+PF+ Sbjct: 598 LIGILVLIGGHIFST-AINALGAFVHALRLHYVEFFGTFYSGEGRKFEPFA 647
>VATI_PYRAB (Q9UXU2) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 659 Score = 51.2 bits (121), Expect = 3e-06 Identities = 23/51 (45%), Positives = 34/51 (66%) Frame = -2 Query: 569 LVGLIVFAFATAFILLGMESLSAFLHALRLHWVEFMNKFYHGDGYKFKPFS 417 L+G+++ F + +L AF+HALRLH+VEF FY G+G KF+PF+ Sbjct: 598 LIGIVILIGGHIFST-AINALGAFVHALRLHYVEFFGTFYSGEGRKFEPFA 647
>VATI_METJA (Q57675) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 695 Score = 50.8 bits (120), Expect = 3e-06 Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 6/56 (10%) Frame = -2 Query: 569 LVGLIVFAFATAFILLG------MESLSAFLHALRLHWVEFMNKFYHGDGYKFKPF 420 ++G+IV A +L+G M L AF+H+LRLH+VEF ++FY G G KF PF Sbjct: 634 VIGIIV---AIIILLVGHTFNFVMNGLGAFIHSLRLHYVEFFSQFYEGGGKKFSPF 686
>VATI_HALSA (Q9HND8) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 722 Score = 47.8 bits (112), Expect = 3e-05 Identities = 24/52 (46%), Positives = 32/52 (61%) Frame = -2 Query: 569 LVGLIVFAFATAFILLGMESLSAFLHALRLHWVEFMNKFYHGDGYKFKPFSF 414 L+G++V A +L + SA L ALRL +VEF NKFY G G K+ PF + Sbjct: 664 LIGVLVLLVGHALVL-ALGVTSAGLQALRLEYVEFFNKFYEGGGEKYNPFGY 714
>VATI_METMA (O59659) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 649 Score = 43.5 bits (101), Expect = 5e-04 Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 5/56 (8%) Frame = -2 Query: 566 VGLIVFAFATAFIL-LGMESLSAF----LHALRLHWVEFMNKFYHGDGYKFKPFSF 414 +G A FIL G+ ++ + LHALRL +VEF KFY G G KF PF + Sbjct: 587 IGAAAIAAIIVFILGHGLNTILSIIAPGLHALRLQYVEFFGKFYEGGGRKFNPFGY 642
>VATI_SULSO (Q9UWW3) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 701 Score = 42.0 bits (97), Expect = 0.002 Identities = 18/45 (40%), Positives = 26/45 (57%) Frame = -2 Query: 557 IVFAFATAFILLGMESLSAFLHALRLHWVEFMNKFYHGDGYKFKP 423 I+ + +G+E L F+ LRLH+ E +KFY G G KF+P Sbjct: 649 IIILIIGNLLAIGLEGLVVFIQDLRLHFYEMFSKFYEGRGRKFEP 693
>VATI_AERPE (Q9YEA0) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 686 Score = 41.2 bits (95), Expect = 0.003 Identities = 22/73 (30%), Positives = 39/73 (53%) Frame = -2 Query: 641 SELSTVFYEKLLLFAWGYDSLIFKLVGLIVFAFATAFILLGMESLSAFLHALRLHWVEFM 462 S + ++Y +++ G ++ +VG +++ + ME L AF HA RLH+ E+ Sbjct: 603 SLMFVIYYLTVMIMQGG---ILADVVGALLYVGGNLAVA-AMEGLLAFAHASRLHFYEWF 658 Query: 461 NKFYHGDGYKFKP 423 +KFY G G + P Sbjct: 659 SKFYSGTGVPYTP 671
>VATI_THEAC (Q9HM61) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 637 Score = 40.4 bits (93), Expect = 0.004 Identities = 19/55 (34%), Positives = 31/55 (56%) Frame = -2 Query: 584 SLIFKLVGLIVFAFATAFILLGMESLSAFLHALRLHWVEFMNKFYHGDGYKFKPF 420 S+ + G+++ F F L+ + + RL +VEF +KFYHG+G F+PF Sbjct: 567 SIGLAIAGVVILIFGQMFNLI-LAVFEPGIQGARLIYVEFFSKFYHGNGRMFRPF 620
>NTPI_ENTHR (P43439) V-type sodium ATP synthase subunit I (EC 3.6.3.15)| (Na(+)-translocating ATPase subunit I) Length = 664 Score = 40.4 bits (93), Expect = 0.004 Identities = 21/46 (45%), Positives = 26/46 (56%) Frame = -2 Query: 560 LIVFAFATAFILLGMESLSAFLHALRLHWVEFMNKFYHGDGYKFKP 423 +IV F+ L LSA++H RL +VEF KFY G G FKP Sbjct: 608 IIVLQALNMFLTL----LSAYVHGARLQYVEFFGKFYTGGGRSFKP 649
>VATI_METTH (O27041) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 658 Score = 39.7 bits (91), Expect = 0.008 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 6/60 (10%) Frame = -2 Query: 581 LIFKLVGLIVFAFATAFILLG------MESLSAFLHALRLHWVEFMNKFYHGDGYKFKPF 420 L ++++ +I A + G +SL AF+++LRLH+VEF +FY G KF F Sbjct: 588 LSYEMIPVIGVVLAPIIFVFGHIANNAFQSLGAFINSLRLHYVEFFAQFYMGGKNKFNAF 647
>VATI_ARCFU (O29106) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 676 Score = 37.7 bits (86), Expect = 0.029 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = -2 Query: 569 LVGLIVFAFA-TAFILLGMESLSAFLHALRLHWVEFMNKFYHGDGYKFKPF 420 +VG IV ++LG+ L L +LRLH+VEF KF+ G G ++PF Sbjct: 619 IVGAIVLLIGHVGNLILGI--LDPGLQSLRLHYVEFFTKFFEGGGRLYEPF 667
>Y081_BUCBP (Q89AY7) Hypothetical protein bbp_081| Length = 717 Score = 32.0 bits (71), Expect = 1.6 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = -2 Query: 635 LSTVFYEKLLLFAWGYDSLIFKLV-GLIVFAFATAFILLGMESLSAFLHALRLHWVEFMN 459 + T K+ F + DS + K V LI + F+ + + + +S F H+++ +V+F+N Sbjct: 649 IQTNVLRKINYFKFYLDSNVNKTVFALISYLFSNYYKKININYVSFFKHSIKSKFVKFLN 708 Query: 458 KFYH 447 KF + Sbjct: 709 KFIY 712
>ROK1_SCHPO (Q09775) ATP-dependent RNA helicase rok1 (EC 3.6.1.-)| Length = 481 Score = 30.0 bits (66), Expect = 6.0 Identities = 18/69 (26%), Positives = 33/69 (47%) Frame = +2 Query: 29 IYALQSGHSNDKVGFFSFLPSDKM*QLKVDRSNLHFLSSLLATIICLSAGGTVRQARTLQ 208 + A+Q+G S +KV FF +D++ + H LS+ ++ IC S +R + Sbjct: 178 VQAIQTGLSFEKVEFFVMDEADRLFEPGFIEQTDHILSACTSSNICKSLFSATIPSRVEE 237 Query: 209 YCRKITKSP 235 + +T P Sbjct: 238 LAKVVTVDP 246 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,228,470 Number of Sequences: 219361 Number of extensions: 1958114 Number of successful extensions: 4373 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4258 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4370 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
