| Clone Name | rbags32b15 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL928990.4| Zebrafish DNA sequence from clone CH211-11F8, complete sequence Length = 185618 Score = 46.1 bits (23), Expect = 0.041 Identities = 23/23 (100%) Strand = Plus / Plus Query: 150 gaaccaacacacacagacacaat 172 ||||||||||||||||||||||| Sbjct: 168478 gaaccaacacacacagacacaat 168500
>gb|AC069208.24| Homo sapiens 12 BAC RP11-778H2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167182 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Minus Query: 156 acacacacagacacaatgtacagat 180 ||||||||| ||||||||||||||| Sbjct: 109923 acacacacacacacaatgtacagat 109899
>emb|BX511086.5| Zebrafish DNA sequence from clone DKEY-38P8 in linkage group 7, complete sequence Length = 228170 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 aaccaacacacacagacacaa 171 ||||||||||||||||||||| Sbjct: 47165 aaccaacacacacagacacaa 47185
>gb|DQ316795.1| Diphyllobothrium latum clone 4 18S ribosomal RNA gene, complete sequence Length = 2113 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacacaat 172 ||||||||||||||||||||| Sbjct: 732 accaacacacacagacacaat 712
>gb|AC113198.15| Mus musculus chromosome 14, clone RP23-248E15, complete sequence Length = 236220 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ctgcagagcatcagagttta 126 |||||||||||||||||||| Sbjct: 106392 ctgcagagcatcagagttta 106411
>gb|AC116995.3| Mus musculus BAC clone RP23-3C16 from 1, complete sequence Length = 173131 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 acacacacagacacaatgtacaga 179 ||||||||| |||||||||||||| Sbjct: 37970 acacacacatacacaatgtacaga 37947
>emb|BX321904.19| Zebrafish DNA sequence from clone DKEY-279K15 in linkage group 1, complete sequence Length = 153891 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 acacagacacaatgtacaga 179 |||||||||||||||||||| Sbjct: 123249 acacagacacaatgtacaga 123268
>emb|BX038964.1|CNS09288 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB3CD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 638 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aaccaacacacacagacaca 170 |||||||||||||||||||| Sbjct: 339 aaccaacacacacagacaca 358
>emb|BX038963.1|CNS09287 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB3CD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 683 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aaccaacacacacagacaca 170 |||||||||||||||||||| Sbjct: 418 aaccaacacacacagacaca 399
>gb|AC095033.2| Homo sapiens chromosome 1 clone RP11-313A24, complete sequence Length = 157332 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 acacacacagacacaatgta 175 |||||||||||||||||||| Sbjct: 31559 acacacacagacacaatgta 31540
>gb|AC153652.3| Mus musculus BAC clone RP24-89C18 from chromosome 1, complete sequence Length = 168628 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 acacacacagacacaatgtacaga 179 ||||||||| |||||||||||||| Sbjct: 89579 acacacacatacacaatgtacaga 89602
>gb|AC148715.1| Macaca mulatta Major Histocompatibility Complex BAC MMU487N12, complete sequence Length = 153422 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacacaa 171 |||||||||||||||||||| Sbjct: 107140 accaacacacacagacacaa 107121
>gb|AC148713.1| Macaca mulatta Major Histocompatibility Complex BAC MMU457F04, complete sequence Length = 149331 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacacaa 171 |||||||||||||||||||| Sbjct: 49374 accaacacacacagacacaa 49355
>gb|AC148712.1| Macaca mulatta Major Histocompatibility Complex BAC MMU429H11, complete sequence Length = 155789 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacacaa 171 |||||||||||||||||||| Sbjct: 1594 accaacacacacagacacaa 1575
>gb|AC148699.1| Macaca mulatta Major Histocompatibility Complex BAC MMU274L13, complete sequence Length = 210164 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacacaa 171 |||||||||||||||||||| Sbjct: 152828 accaacacacacagacacaa 152809
>gb|AC148695.1| Macaca mulatta Major Histocompatibility Complex BAC MMU244P03, complete sequence Length = 200270 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacacaa 171 |||||||||||||||||||| Sbjct: 61881 accaacacacacagacacaa 61862
>gb|AC148686.1| Macaca mulatta Major Histocompatibility Complex BAC MMU192G09, complete sequence Length = 181166 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacacaa 171 |||||||||||||||||||| Sbjct: 164828 accaacacacacagacacaa 164809
>gb|AC148678.1| Macaca mulatta Major Histocompatibility Complex BAC MMU125A15, complete sequence Length = 172875 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacacaa 171 |||||||||||||||||||| Sbjct: 7969 accaacacacacagacacaa 7950
>gb|AC148665.1| Macaca mulatta Major Histocompatibility Complex BAC MMU023M02, complete sequence Length = 182939 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacacaa 171 |||||||||||||||||||| Sbjct: 9934 accaacacacacagacacaa 9915
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacacaa 171 |||||||||||||||||||| Sbjct: 1131243 accaacacacacagacacaa 1131262 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacacaa 171 |||||||||||||||||||| Sbjct: 972316 accaacacacacagacacaa 972335 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacacaa 171 |||||||||||||||||||| Sbjct: 671821 accaacacacacagacacaa 671840
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 2.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 49 aatncaaatgtcatcagtgcggcaacg 75 ||| |||||||||| |||||||||||| Sbjct: 1301266 aatgcaaatgtcataagtgcggcaacg 1301292
>gb|AC158526.3| Mus musculus BAC clone RP23-288A9 from chromosome 12, complete sequence Length = 236362 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 153 ccaacacacacagacacaatgtacagat 180 |||||||||||| |||||||||| |||| Sbjct: 41652 ccaacacacacacacacaatgtaaagat 41679
>gb|AC008429.6| Homo sapiens chromosome 5 clone CTC-308K20, complete sequence Length = 159423 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 aacacacacagacacaatgtacag 178 |||||||||||||||| ||||||| Sbjct: 101324 aacacacacagacacattgtacag 101347
>ref|XM_464004.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2166 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 atcttcctgcagagcatca 119 ||||||||||||||||||| Sbjct: 754 atcttcctgcagagcatca 736
>gb|AC119932.7| Mus musculus chromosome 15, clone RP24-260C11, complete sequence Length = 170117 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 163827 accaacacacacagacaca 163845
>gb|AF220602.1| Lycopersicon pimpinellifolium Rio Grande 76R Pto locus, complete sequence Length = 60831 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 123 tttacaattgaaagttcat 141 ||||||||||||||||||| Sbjct: 54227 tttacaattgaaagttcat 54209
>gb|AC108840.13| Mus musculus chromosome 1, clone RP23-348P7, complete sequence Length = 209336 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 40050 accaacacacacagacaca 40068
>gb|AC160930.2| Mus musculus BAC clone RP24-383F22 from chromosome 14, complete sequence Length = 230236 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 176 cagatccttccgaagagcagcaa 198 |||||||| |||||||||||||| Sbjct: 197546 cagatcctcccgaagagcagcaa 197524
>gb|AC126403.7| Mus musculus chromosome 15, clone RP24-483E7, complete sequence Length = 152384 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 123 tttacaattgaaagttcat 141 ||||||||||||||||||| Sbjct: 135908 tttacaattgaaagttcat 135926
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence Length = 209986 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 199474 accaacacacacagacaca 199492
>gb|AC161111.2| Mus musculus chromosome 15, clone RP23-50B6, complete sequence Length = 200074 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 123 tttacaattgaaagttcat 141 ||||||||||||||||||| Sbjct: 76362 tttacaattgaaagttcat 76380
>ref|NG_004832.1| Homo sapiens chromosome Y inverted repeat IR2, centromeric (IR2@) on chromosome Y Length = 389013 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 160271 accaacacacacagacaca 160253
>gb|AC163038.5| Mus musculus BAC clone RP23-180A14 from chromosome 13, complete sequence Length = 213865 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 156 acacacacagacacaatgt 174 ||||||||||||||||||| Sbjct: 116052 acacacacagacacaatgt 116070
>gb|AC137154.2| Mus musculus BAC clone RP24-572L22 from chromosome 5, complete sequence Length = 173460 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 21139 accaacacacacagacaca 21157
>gb|AC121938.3| Mus musculus BAC clone RP24-208D21 from chromosome 6, complete sequence Length = 144353 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 60182 accaacacacacagacaca 60200
>emb|CT025679.5| Mouse DNA sequence from clone RP24-296K22 on chromosome 14, complete sequence Length = 160805 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 ccaacacacacagacacaa 171 ||||||||||||||||||| Sbjct: 102001 ccaacacacacagacacaa 102019
>ref|XM_802015.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509649.40) partial mRNA Length = 744 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 157 cacacacagacacaatgtacaga 179 ||||||||||||||| ||||||| Sbjct: 82 cacacacagacacaaagtacaga 60
>ref|XM_808662.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511285.80) partial mRNA Length = 744 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 157 cacacacagacacaatgtacaga 179 ||||||||||||||| ||||||| Sbjct: 82 cacacacagacacaaagtacaga 60
>gb|AC129919.9| Homo sapiens chromosome 17, clone RP13-1277B16, complete sequence Length = 182735 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 168380 accaacacacacagacaca 168362
>gb|AC129606.4| Mus musculus BAC clone RP23-128L6 from 8, complete sequence Length = 235915 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 211873 accaacacacacagacaca 211855
>gb|AC102432.9| Mus musculus chromosome 19, clone RP24-114A21, complete sequence Length = 199240 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 156 acacacacagacacaatgt 174 ||||||||||||||||||| Sbjct: 199181 acacacacagacacaatgt 199199
>gb|AC113497.6| Mus musculus chromosome 10, clone RP23-365G13, complete sequence Length = 218508 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 197305 accaacacacacagacaca 197287
>gb|AC115099.6| Homo sapiens chromosome 17, clone RP11-149I9, complete sequence Length = 161156 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 157666 accaacacacacagacaca 157648
>gb|AC125452.7| Mus musculus, clone RP23-43F6, complete sequence Length = 162045 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 48663 accaacacacacagacaca 48681
>gb|AC129263.6| Rattus norvegicus 2 BAC CH230-258E4 (Children's Hospital Oakland Research Institute) complete sequence Length = 194958 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 18421 accaacacacacagacaca 18403
>gb|AC073493.27| Homo sapiens Xp BAC RP11-631N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211422 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 57761 accaacacacacagacaca 57743
>gb|AC163019.5| Mus musculus chromosome 19, clone RP24-290E5, complete sequence Length = 152969 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 acacacacagacacaatgt 174 ||||||||||||||||||| Sbjct: 135392 acacacacagacacaatgt 135374
>emb|CR380949.1| Candida glabrata strain CBS138 chromosome C complete sequence Length = 558804 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 425727 accaacacacacagacaca 425745
>emb|AL606991.3|OSJN00113 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032B23, complete sequence Length = 120640 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 113 agcatcagagtttacaatt 131 ||||||||||||||||||| Sbjct: 42262 agcatcagagtttacaatt 42280
>gb|AC130893.3| Homo sapiens X BAC RP13-926M18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 110999 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 156 acacacacagacacaatgt 174 ||||||||||||||||||| Sbjct: 61017 acacacacagacacaatgt 61035
>gb|AC120367.8| Mus musculus chromosome 7, clone RP24-325B21, complete sequence Length = 224814 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 156 acacacacagacacaatgtacag 178 ||||||||| ||||||||||||| Sbjct: 120654 acacacacacacacaatgtacag 120632
>gb|AC163677.2| Mus musculus BAC clone RP24-86D16 from chromosome 17, complete sequence Length = 222584 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 186037 accaacacacacagacaca 186019
>gb|AC026441.5| Homo sapiens chromosome 5 clone CTD-2280O3, complete sequence Length = 112533 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 168 acaatgtacagatccttcc 186 ||||||||||||||||||| Sbjct: 55747 acaatgtacagatccttcc 55729
>gb|AC098687.3| Bos taurus clone rp42-194o5, complete sequence Length = 156543 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 118404 accaacacacacagacaca 118386
>gb|AC108935.5| Homo sapiens BAC clone RP11-503L19 from 4, complete sequence Length = 133531 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 126 acaattgaaagttcatttc 144 ||||||||||||||||||| Sbjct: 6531 acaattgaaagttcatttc 6513
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 92452 accaacacacacagacaca 92434
>gb|AC096746.3| Homo sapiens BAC clone RP11-363G15 from 4, complete sequence Length = 158944 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 acacacacagacacaatgt 174 ||||||||||||||||||| Sbjct: 44495 acacacacagacacaatgt 44477
>gb|AC106771.2| Homo sapiens chromosome 5 clone RP11-308B16, complete sequence Length = 172930 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 100987 accaacacacacagacaca 101005
>emb|BX296541.5| Zebrafish DNA sequence from clone CH211-278P9, complete sequence Length = 157802 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 caacacacacagacacaat 172 ||||||||||||||||||| Sbjct: 108289 caacacacacagacacaat 108307
>gb|AC153553.4| Mus musculus 10 BAC RP23-329D17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185583 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 140877 accaacacacacagacaca 140895
>gb|AC009352.5| Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone BACR11M13, complete sequence Length = 190301 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 acacacacagacacaatgt 174 ||||||||||||||||||| Sbjct: 149863 acacacacagacacaatgt 149845
>gb|AC093569.1| Homo sapiens chromosome 3 clone RP11-260J13 map 3p, complete sequence Length = 55940 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 5359 accaacacacacagacaca 5341
>dbj|AK040669.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530010O07 product:unclassifiable, full insert sequence Length = 937 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 176 cagatccttccgaagagcagcaa 198 |||||||| |||||||||||||| Sbjct: 103 cagatcctcccgaagagcagcaa 81
>dbj|AK084292.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230018I05 product:hypothetical protein, full insert sequence Length = 1016 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 153 ccaacacacacagacacaa 171 ||||||||||||||||||| Sbjct: 620 ccaacacacacagacacaa 602
>gb|AC008332.11|AC008332 Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone BACR48D10, complete sequence Length = 153250 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 acacacacagacacaatgt 174 ||||||||||||||||||| Sbjct: 90051 acacacacagacacaatgt 90033
>gb|AC010141.2|AC010141 Homo sapiens BAC clone RP11-220O2 from Y, complete sequence Length = 121258 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 13048 accaacacacacagacaca 13030
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 113 agcatcagagtttacaatt 131 ||||||||||||||||||| Sbjct: 9947312 agcatcagagtttacaatt 9947330
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 156 acacacacagacacaatgtacag 178 ||||||||| ||||||||||||| Sbjct: 5679287 acacacacacacacaatgtacag 5679265
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 atcttcctgcagagcatca 119 ||||||||||||||||||| Sbjct: 1605245 atcttcctgcagagcatca 1605227
>gb|AC119038.4| Homo sapiens 3 BAC RP11-508O18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175249 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 94757 accaacacacacagacaca 94775
>gb|AC154738.2| Mus musculus BAC clone RP24-390D14 from chromosome 14, complete sequence Length = 197100 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 176 cagatccttccgaagagcagcaa 198 |||||||| |||||||||||||| Sbjct: 34410 cagatcctcccgaagagcagcaa 34388
>gb|AC011747.8| Homo sapiens BAC clone RP11-434B12 from 2, complete sequence Length = 177433 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 160 acacagacacaatgtacag 178 ||||||||||||||||||| Sbjct: 56960 acacagacacaatgtacag 56942
>gb|AC104201.12| Mus musculus chromosome 19, clone RP24-531I1, complete sequence Length = 166165 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 acacacacagacacaatgt 174 ||||||||||||||||||| Sbjct: 165064 acacacacagacacaatgt 165046
>gb|AC027601.25| Homo sapiens chromosome 17, clone RP11-455O6, complete sequence Length = 192732 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 17662 accaacacacacagacaca 17644
>gb|AY190950.1| Drosophila willistoni clone DWIF01_1_E5 (D1417) genomic sequence Length = 40487 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 3212 accaacacacacagacaca 3194
>gb|AC016648.5|AC016648 Homo sapiens chromosome 5 clone RPCI-1_137K24, complete sequence Length = 123946 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 168 acaatgtacagatccttcc 186 ||||||||||||||||||| Sbjct: 74858 acaatgtacagatccttcc 74876
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 atcttcctgcagagcatca 119 ||||||||||||||||||| Sbjct: 42348 atcttcctgcagagcatca 42330
>dbj|AK102856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110M10, full insert sequence Length = 2166 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 atcttcctgcagagcatca 119 ||||||||||||||||||| Sbjct: 754 atcttcctgcagagcatca 736
>emb|AL929435.16| Zebrafish DNA sequence from clone CH211-153J24 in linkage group 20, complete sequence Length = 181400 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 155 aacacacacagacacaatg 173 ||||||||||||||||||| Sbjct: 153508 aacacacacagacacaatg 153490
>gb|AE003638.2| Drosophila melanogaster chromosome 2L, section 47 of 83 of the complete sequence Length = 254309 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 acacacacagacacaatgt 174 ||||||||||||||||||| Sbjct: 93299 acacacacagacacaatgt 93281
>dbj|AP001823.5| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2355J17, complete sequence Length = 178189 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 153 ccaacacacacagacacaatgta 175 |||||||||||| |||||||||| Sbjct: 176777 ccaacacacacacacacaatgta 176755
>emb|AL163612.5|CNS01RII Human chromosome 14 DNA sequence BAC R-346L24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171345 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 ccaacacacacagacacaa 171 ||||||||||||||||||| Sbjct: 150164 ccaacacacacagacacaa 150182
>dbj|AP000889.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-101M8, complete sequence Length = 163047 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 153 ccaacacacacagacacaatgta 175 |||||||||||| |||||||||| Sbjct: 79636 ccaacacacacacacacaatgta 79614
>dbj|AK116212.1| Ciona intestinalis cDNA, clone:citb015m09, full insert sequence Length = 764 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 102 tcttcctgcagagcatcagagtt 124 |||||||| |||||||||||||| Sbjct: 448 tcttcctggagagcatcagagtt 426
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 156 acacacacagacacaatgtacag 178 ||||||||| ||||||||||||| Sbjct: 5679280 acacacacacacacaatgtacag 5679258
>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159056 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 156 acacacacagacacaatgtacag 178 ||||||||| ||||||||||||| Sbjct: 33810 acacacacacacacaatgtacag 33788
>gb|AC154585.2| Mus musculus BAC clone RP23-359K10 from 12, complete sequence Length = 198520 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 180 tccttccgaagagcagcaa 198 ||||||||||||||||||| Sbjct: 60654 tccttccgaagagcagcaa 60636
>emb|AL773540.18| Mouse DNA sequence from clone RP23-177L19 on chromosome 2, complete sequence Length = 217148 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 46496 accaacacacacagacaca 46514
>gb|AC169676.2| Mus musculus BAC clone RP24-163P20 from chromosome 17, complete sequence Length = 150204 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 141929 accaacacacacagacaca 141947
>emb|AL714021.12| Mouse DNA sequence from clone RP23-305F20 on chromosome X, complete sequence Length = 182607 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 133041 accaacacacacagacaca 133059
>gb|AC165249.2| Mus musculus BAC clone RP24-157P13 from chromosome 12, complete sequence Length = 193902 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 180 tccttccgaagagcagcaa 198 ||||||||||||||||||| Sbjct: 14208 tccttccgaagagcagcaa 14226
>gb|M65235.1|UMPGEP10S2 Human snRNP E protein pseudogene 110 Length = 5351 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 160 acacagacacaatgtacag 178 ||||||||||||||||||| Sbjct: 4572 acacagacacaatgtacag 4554
>gb|AC093611.2| Homo sapiens chromosome 3 clone CTD-2059M21 map 3p, complete sequence Length = 120926 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 accaacacacacagacaca 170 ||||||||||||||||||| Sbjct: 12948 accaacacacacagacaca 12930 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,866,778 Number of Sequences: 3902068 Number of extensions: 1866778 Number of successful extensions: 260947 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 260310 Number of HSP's gapped (non-prelim): 637 length of query: 200 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 178 effective length of database: 17,147,199,772 effective search space: 3052201559416 effective search space used: 3052201559416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)