ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags31m11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478842.1| Oryza sativa (japonica cultivar-group), mRNA Length = 996 Score = 638 bits (322), Expect = e-180 Identities = 448/490 (91%) Strand = Plus / Minus Query: 215 tctaccatcccgcgctgcttgaaaatttcaaacatggtcgaaccaatcttagctggtgac 274 |||| ||| ||||| |||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 992 tctaacattccgcgttgcttgaaaatttcgaacatagttgaaccaatcttcgctggtgac 933 Query: 275 tcgacaacagttaccccagcctccctgagtgccttgatcttgtcttgggcagtacccttg 334 || |||||||| ||||||||||| ||||| |||||||| |||||||| || ||||||||| Sbjct: 932 tcaacaacagtaaccccagcctctctgagagccttgattttgtcttgtgccgtacccttg 873 Query: 335 ccccctgacacaattgctccagcatggcccatgcgacggcccgggggtgcagtaagtcca 394 |||||||||||||||||||||||||| ||||||||||| || || || ||||| |||||| Sbjct: 872 ccccctgacacaattgctccagcatgacccatgcgacgcccaggtggagcagtgagtcca 813 Query: 395 gctatgaatgcaacgacaggcttttctgttttgctctcccggataaaggctgcagcatcc 454 |||||||||||||| |||||||||| ||||||||||||| | || ||||||||||||||| Sbjct: 812 gctatgaatgcaacaacaggcttttgtgttttgctctcctgaatgaaggctgcagcatcc 753 Query: 455 tcctcagcagtacctccaatttctccaatgagaacaataccttctgtctgaggatcatcc 514 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 752 tcctcagcagtacctccaatttctccgatgagaacaataccttctgtctgaggatcatca 693 Query: 515 acaaacttttcaaggcagtcaacaaaattagtgccgttaaaggggtcaccacccatgccc 574 ||||||||||||||||| ||||||||||| ||||| || ||||| |||||||| ||||| Sbjct: 692 acaaacttttcaaggcaatcaacaaaattcgtgccattgaagggatcaccaccaatgcca 633 Query: 575 acacaagttgactgccccaagcctacggctgttgtttgaaacaccgcttcatatgtcaag 634 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 acacacgttgactgccccaagcctacggctgttgtttgaaacaccgcttcatatgtcaag 573 Query: 635 gtaccagaacgagatactattccaatgcgtcctggtttgtggatgtaacctggcatgatt 694 |||||||| ||||||||||| |||| || ||||| |||||||||||||||||||||||| Sbjct: 572 gtaccagagcgagatactatcccaacacgacctggcttgtggatgtaacctggcatgatt 513 Query: 695 ccaatcttac 704 ||||| |||| Sbjct: 512 ccaattttac 503
>gb|AY104319.1| Zea mays PCO131533 mRNA sequence Length = 1619 Score = 561 bits (283), Expect = e-156 Identities = 442/495 (89%) Strand = Plus / Minus Query: 210 tctactctaccatcccgcgctgcttgaaaatttcaaacatggtcgaaccaatcttagctg 269 |||| |||||||| || ||||||||||| |||||||||||||| || |||||||| || | Sbjct: 1152 tctattctaccattccacgctgcttgaagatttcaaacatggtagagccaatcttcgccg 1093 Query: 270 gtgactcgacaacagttaccccagcctccctgagtgccttgatcttgtcttgggcagtac 329 ||||||||||||| || || || ||||| |||||||||||||| ||||| |||||||||| Sbjct: 1092 gtgactcgacaacggtaacacctgcctctctgagtgccttgattttgtcctgggcagtac 1033 Query: 330 ccttgccccctgacacaattgctccagcatggcccatgcgacggcccgggggtgcagtaa 389 |||| || |||| ||| || ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 1032 cctttcctcctgccacgatagctccagcatgacccatgcgacggcccgggggtgccgtaa 973 Query: 390 gtccagctatgaatgcaacgacaggcttttctgttttgctctcccggataaaggctgcag 449 ||||||| ||||||||||| |||||||||| ||||||||| ||| |||| || | |||| Sbjct: 972 gtccagcaatgaatgcaacaacaggcttttgtgttttgctttcctggatgaatgtcgcag 913 Query: 450 catcctcctcagcagtacctccaatttctccaatgagaacaataccttctgtctgaggat 509 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 912 catcctcctcagccgtacctccaatttcaccaatgagaacaataccttctgtctgagggt 853 Query: 510 catccacaaacttttcaaggcagtcaacaaaattagtgccgttaaaggggtcaccaccca 569 | | || |||||||||||||| ||||||||||| ||||| || || ||||||||||| | Sbjct: 852 cgttgacgaacttttcaaggcaatcaacaaaatttgtgccattgaatgggtcaccaccaa 793 Query: 570 tgcccacacaagttgactgccccaagcctacggctgttgtttgaaacaccgcttcatatg 629 |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 792 tgcctacacaagttgactgccccaagcctacagctgttgtttgaaacaccgcttcatatg 733 Query: 630 tcaaggtaccagaacgagatactattccaatgcgtcctggtttgtggatgtaacctggca 689 |||||||||||||||||||||| || ||||| || || || ||||||||||||||||||| Sbjct: 732 tcaaggtaccagaacgagatacaatcccaatacgcccaggcttgtggatgtaacctggca 673 Query: 690 tgattccaatcttac 704 |||||||||| |||| Sbjct: 672 tgattccaattttac 658
>gb|AF457979.1| Zea mays clone cen1.pk0117.b5, mRNA sequence Length = 533 Score = 291 bits (147), Expect = 2e-75 Identities = 217/239 (90%), Gaps = 1/239 (0%) Strand = Plus / Minus Query: 466 acctccaatttctccaatgagaacaataccttctgtctgaggatcatccacaaacttttc 525 |||||||||||| || |||||| |||| |||||||||||||| ||||| ||||| ||||| Sbjct: 329 acctccaatttcaccgatgaga-caatgccttctgtctgagggtcatcgacaaatttttc 271 Query: 526 aaggcagtcaacaaaattagtgccgttaaaggggtcaccacccatgcccacacaagttga 585 |||||| ||||||||||| ||||| || || ||||||||||| ||||| ||||||||||| Sbjct: 270 aaggcaatcaacaaaatttgtgccattgaatgggtcaccaccaatgcctacacaagttga 211 Query: 586 ctgccccaagcctacggctgttgtttgaaacaccgcttcatatgtcaaggtaccagaacg 645 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 ctgccccaagcctacagctgttgtttgaaacaccgcttcatatgtcaaggtaccagaacg 151 Query: 646 agatactattccaatgcgtcctggtttgtggatgtaacctggcatgattccaatcttac 704 |||||| || ||||| || || || ||||||||||||||||||||||||||||| |||| Sbjct: 150 agatacaatcccaatacgcccaggcttgtggatgtaacctggcatgattccaattttac 92
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 182 bits (92), Expect = 1e-42 Identities = 146/164 (89%) Strand = Plus / Minus Query: 189 tctactgtaccatttcttctctctactctaccatcccgcgctgcttgaaaatttcaaaca 248 ||||||||||||||| |||| ||| |||| ||| ||||| |||||||||||||| |||| Sbjct: 23312031 tctactgtaccatttgctctccctattctaacattccgcgttgcttgaaaatttcgaaca 23311972 Query: 249 tggtcgaaccaatcttagctggtgactcgacaacagttaccccagcctccctgagtgcct 308 | || ||||||||||| ||||||||||| |||||||| ||||||||||| ||||| |||| Sbjct: 23311971 tagttgaaccaatcttcgctggtgactcaacaacagtaaccccagcctctctgagagcct 23311912 Query: 309 tgatcttgtcttgggcagtacccttgccccctgacacaattgct 352 |||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 23311911 tgattttgtcttgtgccgtacccttgccccctgacacaattgct 23311868 Score = 182 bits (92), Expect = 1e-42 Identities = 119/128 (92%) Strand = Plus / Minus Query: 492 taccttctgtctgaggatcatccacaaacttttcaaggcagtcaacaaaattagtgccgt 551 |||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| | Sbjct: 23310289 taccttctgtctgaggatcatcaacaaacttttcaaggcaatcaacaaaattcgtgccat 23310230 Query: 552 taaaggggtcaccacccatgcccacacaagttgactgccccaagcctacggctgttgttt 611 | ||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 23310229 tgaagggatcaccaccaatgccaacacacgttgactgccccaagcctacggctgttgttt 23310170 Query: 612 gaaacacc 619 |||||||| Sbjct: 23310169 gaaacacc 23310162 Score = 119 bits (60), Expect = 1e-23 Identities = 81/88 (92%) Strand = Plus / Minus Query: 617 accgcttcatatgtcaaggtaccagaacgagatactattccaatgcgtcctggtttgtgg 676 |||||||||||||||||||||||||| ||||||||||| |||| || ||||| |||||| Sbjct: 23310087 accgcttcatatgtcaaggtaccagagcgagatactatcccaacacgacctggcttgtgg 23310028 Query: 677 atgtaacctggcatgattccaatcttac 704 ||||||||||||||||||||||| |||| Sbjct: 23310027 atgtaacctggcatgattccaattttac 23310000 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Minus Query: 440 aaggctgcagcatcctcctcagcagtacctccaatttctccaatgagaacaatacct 496 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 23310807 aaggctgcagcatcctcctcagcagtacctccaatttctccgatgagaacaatacct 23310751 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 351 ctccagcatggcccatgcgacggcccgggggtgcagtaagtccagctatgaatgcaacga 410 |||||||||| ||||||||||| || || || ||||| |||||||||||||||||||| | Sbjct: 23311266 ctccagcatgacccatgcgacgcccaggtggagcagtgagtccagctatgaatgcaacaa 23311207 Query: 411 caggcttttctgttttgctctcc 433 ||||||||| ||||||||||||| Sbjct: 23311206 caggcttttgtgttttgctctcc 23311184
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 182 bits (92), Expect = 1e-42 Identities = 146/164 (89%) Strand = Plus / Minus Query: 189 tctactgtaccatttcttctctctactctaccatcccgcgctgcttgaaaatttcaaaca 248 ||||||||||||||| |||| ||| |||| ||| ||||| |||||||||||||| |||| Sbjct: 67289 tctactgtaccatttgctctccctattctaacattccgcgttgcttgaaaatttcgaaca 67230 Query: 249 tggtcgaaccaatcttagctggtgactcgacaacagttaccccagcctccctgagtgcct 308 | || ||||||||||| ||||||||||| |||||||| ||||||||||| ||||| |||| Sbjct: 67229 tagttgaaccaatcttcgctggtgactcaacaacagtaaccccagcctctctgagagcct 67170 Query: 309 tgatcttgtcttgggcagtacccttgccccctgacacaattgct 352 |||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 67169 tgattttgtcttgtgccgtacccttgccccctgacacaattgct 67126 Score = 182 bits (92), Expect = 1e-42 Identities = 119/128 (92%) Strand = Plus / Minus Query: 492 taccttctgtctgaggatcatccacaaacttttcaaggcagtcaacaaaattagtgccgt 551 |||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| | Sbjct: 65547 taccttctgtctgaggatcatcaacaaacttttcaaggcaatcaacaaaattcgtgccat 65488 Query: 552 taaaggggtcaccacccatgcccacacaagttgactgccccaagcctacggctgttgttt 611 | ||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 65487 tgaagggatcaccaccaatgccaacacacgttgactgccccaagcctacggctgttgttt 65428 Query: 612 gaaacacc 619 |||||||| Sbjct: 65427 gaaacacc 65420 Score = 119 bits (60), Expect = 1e-23 Identities = 81/88 (92%) Strand = Plus / Minus Query: 617 accgcttcatatgtcaaggtaccagaacgagatactattccaatgcgtcctggtttgtgg 676 |||||||||||||||||||||||||| ||||||||||| |||| || ||||| |||||| Sbjct: 65345 accgcttcatatgtcaaggtaccagagcgagatactatcccaacacgacctggcttgtgg 65286 Query: 677 atgtaacctggcatgattccaatcttac 704 ||||||||||||||||||||||| |||| Sbjct: 65285 atgtaacctggcatgattccaattttac 65258 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Minus Query: 440 aaggctgcagcatcctcctcagcagtacctccaatttctccaatgagaacaatacct 496 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 66065 aaggctgcagcatcctcctcagcagtacctccaatttctccgatgagaacaatacct 66009 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 351 ctccagcatggcccatgcgacggcccgggggtgcagtaagtccagctatgaatgcaacga 410 |||||||||| ||||||||||| || || || ||||| |||||||||||||||||||| | Sbjct: 66524 ctccagcatgacccatgcgacgcccaggtggagcagtgagtccagctatgaatgcaacaa 66465 Query: 411 caggcttttctgttttgctctcc 433 ||||||||| ||||||||||||| Sbjct: 66464 caggcttttgtgttttgctctcc 66442
>gb|BT012809.1| Lycopersicon esculentum clone 113829R, mRNA sequence Length = 1311 Score = 153 bits (77), Expect = 9e-34 Identities = 329/413 (79%) Strand = Plus / Minus Query: 287 accccagcctccctgagtgccttgatcttgtcttgggcagtacccttgccccctgacaca 346 |||||||| ||| |||| || ||||||||||| || || || ||||| || || || ||| Sbjct: 990 accccagcttccttgagagctttgatcttgtcctgtgctgtcccctttccaccagataca 931 Query: 347 attgctccagcatggcccatgcgacggcccgggggtgcagtaagtccagctatgaatgca 406 || || |||||||| ||||| || || || || || ||||| |||||||| || |||||| Sbjct: 930 atggccccagcatgacccattcgtcgtccaggaggagcagttagtccagcaataaatgca 871 Query: 407 acgacaggcttttctgttttgctctcccggataaaggctgcagcatcctcctcagcagta 466 || || ||||||| ||| || ||| || |||||||| ||||| || || || ||| Sbjct: 870 acaacgggcttttgagttccactttcctttatcaaggctgcggcatcttcttctgctgta 811 Query: 467 cctccaatttctccaatgagaacaataccttctgtctgaggatcatccacaaacttttca 526 || ||||| || ||||| ||||| |||||||||||||| |||||| | | ||| | || Sbjct: 810 ccaccaatctcaccaataagaactataccttctgtctgtggatcagcaataaatctctct 751 Query: 527 aggcagtcaacaaaattagtgccgttaaaggggtcaccacccatgcccacacaagttgac 586 | ||| ||||||||||| || || ||||| ||||| ||||| || || |||||||||||| Sbjct: 750 aagcaatcaacaaaatttgtaccattaaaagggtccccaccaatccctacacaagttgac 691 Query: 587 tgccccaagcctacggctgttgtttgaaacaccgcttcatatgtcaaggtaccagaacga 646 || || | || || || ||||| ||||| || |||||||| ||||| |||||||| ||| Sbjct: 690 tgtccaagaccgacagcagttgtctgaaaaactgcttcataagtcaatgtaccagatcga 631 Query: 647 gatactattccaatgcgtcctggtttgtggatgtaacctggcatgattccaat 699 || || |||||||| |||||||||||||| ||||| || ||||| |||||||| Sbjct: 630 gaaacaattccaatacgtcctggtttgtgaatgtatccaggcataattccaat 578
>gb|AY650029.1| Lycopersicon esculentum cultivar TA496 succinyl-CoA ligase alpha 2 subunit mRNA, complete cds Length = 1322 Score = 153 bits (77), Expect = 9e-34 Identities = 329/413 (79%) Strand = Plus / Minus Query: 287 accccagcctccctgagtgccttgatcttgtcttgggcagtacccttgccccctgacaca 346 |||||||| ||| |||| || ||||||||||| || || || ||||| || || || ||| Sbjct: 998 accccagcttccttgagagctttgatcttgtcctgtgctgtcccctttccaccagataca 939 Query: 347 attgctccagcatggcccatgcgacggcccgggggtgcagtaagtccagctatgaatgca 406 || || |||||||| ||||| || || || || || ||||| |||||||| || |||||| Sbjct: 938 atggccccagcatgacccattcgtcgtccaggaggagcagttagtccagcaataaatgca 879 Query: 407 acgacaggcttttctgttttgctctcccggataaaggctgcagcatcctcctcagcagta 466 || || ||||||| ||| || ||| || |||||||| ||||| || || || ||| Sbjct: 878 acaacgggcttttgagttccactttcctttatcaaggctgcggcatcttcttctgctgta 819 Query: 467 cctccaatttctccaatgagaacaataccttctgtctgaggatcatccacaaacttttca 526 || ||||| || ||||| ||||| |||||||||||||| |||||| | | ||| | || Sbjct: 818 ccaccaatctcaccaataagaactataccttctgtctgtggatcagcaataaatctctct 759 Query: 527 aggcagtcaacaaaattagtgccgttaaaggggtcaccacccatgcccacacaagttgac 586 | ||| ||||||||||| || || ||||| ||||| ||||| || || |||||||||||| Sbjct: 758 aagcaatcaacaaaatttgtaccattaaaagggtccccaccaatccctacacaagttgac 699 Query: 587 tgccccaagcctacggctgttgtttgaaacaccgcttcatatgtcaaggtaccagaacga 646 || || | || || || ||||| ||||| || |||||||| ||||| |||||||| ||| Sbjct: 698 tgtccaagaccgacagcagttgtctgaaaaactgcttcataagtcaatgtaccagatcga 639 Query: 647 gatactattccaatgcgtcctggtttgtggatgtaacctggcatgattccaat 699 || || |||||||| |||||||||||||| ||||| || ||||| |||||||| Sbjct: 638 gaaacaattccaatacgtcctggtttgtgaatgtatccaggcataattccaat 586
>gb|DQ235193.1| Solanum tuberosum clone 167F09 succinyl-CoA ligase alpha 1 subunit-like mRNA, complete cds Length = 1389 Score = 123 bits (62), Expect = 8e-25 Identities = 314/398 (78%) Strand = Plus / Minus Query: 302 agtgccttgatcttgtcttgggcagtacccttgccccctgacacaattgctccagcatgg 361 ||||||||||| ||||||||||| || ||||| ||||| || ||||| ||||||||||| Sbjct: 990 agtgccttgattttgtcttgggctgttccctttccccccgatacaatagctccagcatga 931 Query: 362 cccatgcgacggcccgggggtgcagtaagtccagctatgaatgcaacgacaggcttttct 421 ||||| || || || ||||| ||||| | |||||| || || ||||| |||||||||| Sbjct: 930 cccattcgccgtccagggggagcagtcaatccagcaataaaagcaactacaggcttttga 871 Query: 422 gttttgctctcccggataaaggctgcagcatcctcctcagcagtacctccaatttctcca 481 ||| || ||| || | |||||||||||| || || || || || |||||||| ||| Sbjct: 870 gttccactttcctttatgagggctgcagcatcttcttctgctgtgccaccaatttcacca 811 Query: 482 atgagaacaataccttctgtctgaggatcatccacaaacttttcaaggcagtcaacaaaa 541 || |||||||| ||||| || || |||||| | | ||| || || | ||| |||||||| Sbjct: 810 ataagaacaatgccttccgtttgtggatcagcaataaatttctctaagcaatcaacaaag 751 Query: 542 ttagtgccgttaaaggggtcaccacccatgcccacacaagttgactgccccaagcctacg 601 || || || || || || |||||||| || || ||||| ||||| ||||| | ||| || Sbjct: 750 tttgtaccattgaaaggatcaccaccaatccctacacaggttgattgcccaaggccaaca 691 Query: 602 gctgttgtttgaaacaccgcttcatatgtcaaggtaccagaacgagatactattccaatg 661 || || ||||| || || ||||||||||||| || ||||| ||||| || ||||| || Sbjct: 690 gcagtagtttggaaaactgcttcatatgtcagtgtgccagatcgagaaacaattccgata 631 Query: 662 cgtcctggtttgtggatgtaacctggcatgattccaat 699 |||||||||||||| ||||| || ||||| || ||||| Sbjct: 630 cgtcctggtttgtgaatgtatccaggcataataccaat 593
>gb|AY167586.1| Lycopersicon esculentum succinyl-CoA ligase alpha 1 subunit (SCOA) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1164 Score = 115 bits (58), Expect = 2e-22 Identities = 313/398 (78%) Strand = Plus / Minus Query: 302 agtgccttgatcttgtcttgggcagtacccttgccccctgacacaattgctccagcatgg 361 ||||||||||| ||||||||||| || || || ||||| || ||||| ||||||||||| Sbjct: 975 agtgccttgattttgtcttgggctgttccttttccccccgatacaatagctccagcatga 916 Query: 362 cccatgcgacggcccgggggtgcagtaagtccagctatgaatgcaacgacaggcttttct 421 ||||| || || || || || ||||| | |||||| || || ||||| |||||||||| Sbjct: 915 cccattcgccgtccaggtggagcagtcaatccagcaataaaagcaactacaggcttttga 856 Query: 422 gttttgctctcccggataaaggctgcagcatcctcctcagcagtacctccaatttctcca 481 ||| || ||| || | |||||||||||| || || || || || |||||||| ||| Sbjct: 855 gttccactttcctttatgagggctgcagcatcttcttctgctgtgccaccaatttcacca 796 Query: 482 atgagaacaataccttctgtctgaggatcatccacaaacttttcaaggcagtcaacaaaa 541 || ||||||||||||||||| || |||||| | | ||| || || | ||| |||||||| Sbjct: 795 ataagaacaataccttctgtttgtggatcagcaataaatttctctaagcaatcaacaaag 736 Query: 542 ttagtgccgttaaaggggtcaccacccatgcccacacaagttgactgccccaagcctacg 601 || || || || || || |||||||| || || ||||| ||||| || || | ||| || Sbjct: 735 tttgtaccattgaaaggatcaccaccgatccctacacaggttgattggccaaggccaaca 676 Query: 602 gctgttgtttgaaacaccgcttcatatgtcaaggtaccagaacgagatactattccaatg 661 || || ||||| || || ||||||||||||| || ||||| ||||| || ||||| || Sbjct: 675 gcagtagtttggaaaactgcttcatatgtcagtgtgccagatcgagaaacaattccgata 616 Query: 662 cgtcctggtttgtggatgtaacctggcatgattccaat 699 |||||||||||||| ||||| || ||||| || ||||| Sbjct: 615 cgtcctggtttgtgaatgtatccaggcataataccaat 578
>ref|NM_120913.3| Arabidopsis thaliana catalytic/ succinate-CoA ligase (GDP-forming) AT5G08300 mRNA, complete cds Length = 1398 Score = 105 bits (53), Expect = 2e-19 Identities = 206/257 (80%) Strand = Plus / Minus Query: 443 gctgcagcatcctcctcagcagtacctccaatttctccaatgagaacaataccttctgtc 502 ||||||||||| || || ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 918 gctgcagcatcttcttctgcagtgcctccgatttctccaatgagaacgataccttctgtt 859 Query: 503 tgaggatcatccacaaacttttcaaggcagtcaacaaaattagtgccgttaaaggggtca 562 ||||||||| | | || || || | |||||| ||||| || || |||||||| || || Sbjct: 858 tgaggatcaacaaagaatttctccaagcagtcgacaaagtttgtcccgttaaaaggatcc 799 Query: 563 ccacccatgcccacacaagttgactgccccaagcctacggctgttgtttgaaacaccgct 622 ||||| || || |||||||| || || || | || || || |||||||| || || ||| Sbjct: 798 ccaccgattcctacacaagtagattggcctagacccactgcagttgtttggaaaacagct 739 Query: 623 tcatatgtcaaggtaccagaacgagatactattccaatgcgtcctggtttgtggatgtaa 682 |||||||||||||| ||||| || || || |||||||| || || ||||||||||| Sbjct: 738 tcatatgtcaaggttccagatcgtgagacaattccaatcttcccaggcttgtggatgtat 679 Query: 683 cctggcatgattccaat 699 || ||||| |||||||| Sbjct: 678 cccggcataattccaat 662 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 344 acaattgctccagcatggcccatgcgacggcccgggggtgcagtaagtccagctatgaat 403 ||||| ||||| ||||| ||||| ||||| ||||| ||||||||||||||||| || || Sbjct: 1017 acaatggctccggcatgacccattcgacgacccggtggtgcagtaagtccagcaataaaa 958 Query: 404 gcaacgacaggctt 417 ||||| |||||||| Sbjct: 957 gcaacaacaggctt 944
>emb|AJ001807.1|ATSCLAS Arabidopsis thaliana mRNA for Succinyl-CoA-ligase alpha subunit Length = 1153 Score = 105 bits (53), Expect = 2e-19 Identities = 206/257 (80%) Strand = Plus / Minus Query: 443 gctgcagcatcctcctcagcagtacctccaatttctccaatgagaacaataccttctgtc 502 ||||||||||| || || ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 867 gctgcagcatcttcttctgcagtgcctccgatttctccaatgagaacgataccttctgtt 808 Query: 503 tgaggatcatccacaaacttttcaaggcagtcaacaaaattagtgccgttaaaggggtca 562 ||||||||| | | || || || | |||||| ||||| || || |||||||| || || Sbjct: 807 tgaggatcaacaaagaatttctccaagcagtcgacaaagtttgtcccgttaaaaggatcc 748 Query: 563 ccacccatgcccacacaagttgactgccccaagcctacggctgttgtttgaaacaccgct 622 ||||| || || |||||||| || || || | || || || |||||||| || || ||| Sbjct: 747 ccaccgattcctacacaagtagattggcctagacccactgcagttgtttggaaaacagct 688 Query: 623 tcatatgtcaaggtaccagaacgagatactattccaatgcgtcctggtttgtggatgtaa 682 |||||||||||||| ||||| || || || |||||||| || || ||||||||||| Sbjct: 687 tcatatgtcaaggttccagatcgtgagacaattccaatcttcccaggcttgtggatgtat 628 Query: 683 cctggcatgattccaat 699 || ||||| |||||||| Sbjct: 627 cccggcataattccaat 611 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 344 acaattgctccagcatggcccatgcgacggcccgggggtgcagtaagtccagctatgaat 403 ||||| ||||| ||||| ||||| ||||| ||||| ||||||||||||||||| || || Sbjct: 966 acaatggctccggcatgacccattcgacgacccggtggtgcagtaagtccagcaataaaa 907 Query: 404 gcaacgacaggctt 417 ||||| |||||||| Sbjct: 906 gcaacaacaggctt 893
>gb|AY114613.1| Arabidopsis thaliana succinyl-CoA-ligase alpha subunit (At5g08300) mRNA, complete cds Length = 1167 Score = 105 bits (53), Expect = 2e-19 Identities = 206/257 (80%) Strand = Plus / Minus Query: 443 gctgcagcatcctcctcagcagtacctccaatttctccaatgagaacaataccttctgtc 502 ||||||||||| || || ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 809 gctgcagcatcttcttctgcagtgcctccgatttctccaatgagaacgataccttctgtt 750 Query: 503 tgaggatcatccacaaacttttcaaggcagtcaacaaaattagtgccgttaaaggggtca 562 ||||||||| | | || || || | |||||| ||||| || || |||||||| || || Sbjct: 749 tgaggatcaacaaagaatttctccaagcagtcgacaaagtttgtcccgttaaaaggatcc 690 Query: 563 ccacccatgcccacacaagttgactgccccaagcctacggctgttgtttgaaacaccgct 622 ||||| || || |||||||| || || || | || || || |||||||| || || ||| Sbjct: 689 ccaccgattcctacacaagtagattggcctagacccactgcagttgtttggaaaacagct 630 Query: 623 tcatatgtcaaggtaccagaacgagatactattccaatgcgtcctggtttgtggatgtaa 682 |||||||||||||| ||||| || || || |||||||| || || ||||||||||| Sbjct: 629 tcatatgtcaaggttccagatcgtgagacaattccaatcttcccaggcttgtggatgtat 570 Query: 683 cctggcatgattccaat 699 || ||||| |||||||| Sbjct: 569 cccggcataattccaat 553 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 344 acaattgctccagcatggcccatgcgacggcccgggggtgcagtaagtccagctatgaat 403 ||||| ||||| ||||| ||||| ||||| ||||| ||||||||||||||||| || || Sbjct: 908 acaatggctccggcatgacccattcgacgacccggtggtgcagtaagtccagcaataaaa 849 Query: 404 gcaacgacaggctt 417 ||||| |||||||| Sbjct: 848 gcaacaacaggctt 835
>gb|AY072333.1| Arabidopsis thaliana succinyl-CoA-ligase alpha subunit (At5g08300) mRNA, complete cds Length = 1285 Score = 105 bits (53), Expect = 2e-19 Identities = 206/257 (80%) Strand = Plus / Minus Query: 443 gctgcagcatcctcctcagcagtacctccaatttctccaatgagaacaataccttctgtc 502 ||||||||||| || || ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 885 gctgcagcatcttcttctgcagtgcctccgatttctccaatgagaacgataccttctgtt 826 Query: 503 tgaggatcatccacaaacttttcaaggcagtcaacaaaattagtgccgttaaaggggtca 562 ||||||||| | | || || || | |||||| ||||| || || |||||||| || || Sbjct: 825 tgaggatcaacaaagaatttctccaagcagtcgacaaagtttgtcccgttaaaaggatcc 766 Query: 563 ccacccatgcccacacaagttgactgccccaagcctacggctgttgtttgaaacaccgct 622 ||||| || || |||||||| || || || | || || || |||||||| || || ||| Sbjct: 765 ccaccgattcctacacaagtagattggcctagacccactgcagttgtttggaaaacagct 706 Query: 623 tcatatgtcaaggtaccagaacgagatactattccaatgcgtcctggtttgtggatgtaa 682 |||||||||||||| ||||| || || || |||||||| || || ||||||||||| Sbjct: 705 tcatatgtcaaggttccagatcgtgagacaattccaatcttcccaggcttgtggatgtat 646 Query: 683 cctggcatgattccaat 699 || ||||| |||||||| Sbjct: 645 cccggcataattccaat 629 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 344 acaattgctccagcatggcccatgcgacggcccgggggtgcagtaagtccagctatgaat 403 ||||| ||||| ||||| ||||| ||||| ||||| ||||||||||||||||| || || Sbjct: 984 acaatggctccggcatgacccattcgacgacccggtggtgcagtaagtccagcaataaaa 925 Query: 404 gcaacgacaggctt 417 ||||| |||||||| Sbjct: 924 gcaacaacaggctt 911
>emb|BX830929.1|CNS09ZGH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZF06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1326 Score = 105 bits (53), Expect = 2e-19 Identities = 206/257 (80%) Strand = Plus / Minus Query: 443 gctgcagcatcctcctcagcagtacctccaatttctccaatgagaacaataccttctgtc 502 ||||||||||| || || ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 871 gctgcagcatcttcttctgcagtgcctccgatttctccaatgagaacgataccttctgtt 812 Query: 503 tgaggatcatccacaaacttttcaaggcagtcaacaaaattagtgccgttaaaggggtca 562 ||||||||| | | || || || | |||||| ||||| || || |||||||| || || Sbjct: 811 tgaggatcaacaaagaatttctccaagcagtcgacaaagtttgtcccgttaaaaggatcc 752 Query: 563 ccacccatgcccacacaagttgactgccccaagcctacggctgttgtttgaaacaccgct 622 ||||| || || |||||||| || || || | || || || |||||||| || || ||| Sbjct: 751 ccaccgattcctacacaagtagattggcctagacccactgcagttgtttggaaaacagct 692 Query: 623 tcatatgtcaaggtaccagaacgagatactattccaatgcgtcctggtttgtggatgtaa 682 |||||||||||||| ||||| || || || |||||||| || || ||||||||||| Sbjct: 691 tcatatgtcaaggttccagatcgtgagacaattccaatcttcccaggcttgtggatgtat 632 Query: 683 cctggcatgattccaat 699 || ||||| |||||||| Sbjct: 631 cccggcataattccaat 615 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 344 acaattgctccagcatggcccatgcgacggcccgggggtgcagtaagtccagctatgaat 403 ||||| ||||| ||||| ||||| ||||| ||||| ||||||||||||||||| || || Sbjct: 970 acaatggctccggcatgacccattcgacgacccggtggtgcagtaagtccagcaataaaa 911 Query: 404 gcaacgacaggctt 417 ||||| |||||||| Sbjct: 910 gcaacaacaggctt 897
>gb|AY084298.1| Arabidopsis thaliana clone 10292 mRNA, complete sequence Length = 1299 Score = 105 bits (53), Expect = 2e-19 Identities = 206/257 (80%) Strand = Plus / Minus Query: 443 gctgcagcatcctcctcagcagtacctccaatttctccaatgagaacaataccttctgtc 502 ||||||||||| || || ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 888 gctgcagcatcttcttctgcagtgcctccgatttctccaatgagaacgataccttctgtt 829 Query: 503 tgaggatcatccacaaacttttcaaggcagtcaacaaaattagtgccgttaaaggggtca 562 ||||||||| | | || || || | |||||| ||||| || || |||||||| || || Sbjct: 828 tgaggatcaacaaagaatttctccaagcagtcgacaaagtttgtcccgttaaaaggatcc 769 Query: 563 ccacccatgcccacacaagttgactgccccaagcctacggctgttgtttgaaacaccgct 622 ||||| || || |||||||| || || || | || || || |||||||| || || ||| Sbjct: 768 ccaccgattcctacacaagtagattggcctagacccactgcagttgtttggaaaacagct 709 Query: 623 tcatatgtcaaggtaccagaacgagatactattccaatgcgtcctggtttgtggatgtaa 682 |||||||||||||| ||||| || || || |||||||| || || ||||||||||| Sbjct: 708 tcatatgtcaaggttccagatcgtgagacaattccaatcttcccaggcttgtggatgtat 649 Query: 683 cctggcatgattccaat 699 || ||||| |||||||| Sbjct: 648 cccggcataattccaat 632 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 344 acaattgctccagcatggcccatgcgacggcccgggggtgcagtaagtccagctatgaat 403 ||||| ||||| ||||| ||||| ||||| ||||| ||||||||||||||||| || || Sbjct: 987 acaatggctccggcatgacccattcgacgacccggtggtgcagtaagtccagcaataaaa 928 Query: 404 gcaacgacaggctt 417 ||||| |||||||| Sbjct: 927 gcaacaacaggctt 914
>ref|NM_122231.2| Arabidopsis thaliana catalytic/ succinate-CoA ligase (GDP-forming) AT5G23250 mRNA, complete cds Length = 1449 Score = 99.6 bits (50), Expect = 1e-17 Identities = 185/230 (80%) Strand = Plus / Minus Query: 473 atttctccaatgagaacaataccttctgtctgaggatcatccacaaacttttcaaggcag 532 ||||||||||||||||| ||||||||||| || || ||| | | ||||| || | |||| Sbjct: 835 atttctccaatgagaacgataccttctgtttgggggtcaacaaagaacttctccaagcag 776 Query: 533 tcaacaaaattagtgccgttaaaggggtcaccacccatgcccacacaagttgactgcccc 592 ||||||||||| || || ||||| || || ||||| || || |||||||| || |||||| Sbjct: 775 tcaacaaaatttgtcccattaaacggatccccaccaattcctacacaagtagattgcccc 716 Query: 593 aagcctacggctgttgtttgaaacaccgcttcatatgtcaaggtaccagaacgagatact 652 || ||||| || || ||||| || || |||||||||||||| || ||||| ||||| || Sbjct: 715 aaacctactgcagtagtttggaaaacagcttcatatgtcaatgttccagatcgagaaaca 656 Query: 653 attccaatgcgtcctggtttgtggatgtaacctggcatgattccaatctt 702 || || || || || ||||| ||||| ||||||||||| |||||||| Sbjct: 655 atccctatcttccccggcttgtgtatgtatcctggcatgatcccaatctt 606 Score = 83.8 bits (42), Expect = 7e-13 Identities = 147/182 (80%) Strand = Plus / Minus Query: 242 tcaaacatggtcgaaccaatcttagctggtgactcgacaacagttaccccagcctccctg 301 |||||||| | || ||||||||||||||||||||| || || | || || || || || Sbjct: 1066 tcaaacatcgccgcaccaatcttagctggtgactcaaccaccttaactcctgcgtctctt 1007 Query: 302 agtgccttgatcttgtcttgggcagtacccttgccccctgacacaattgctccagcatgg 361 || ||| ||||||||||| || || ||||| || || || ||||| ||||| ||||| Sbjct: 1006 aggctctttatcttgtcttgagccgtgcccttaccaccggaaacaatggctcccgcatga 947 Query: 362 cccatgcgacggcccgggggtgcagtaagtccagctatgaatgcaacgacaggcttttct 421 ||||| ||||| || || |||||||||||||| |||||||| ||||| |||||||| ||| Sbjct: 946 cccatacgacgccctggtggtgcagtaagtccggctatgaaagcaactacaggcttgtct 887 Query: 422 gt 423 || Sbjct: 886 gt 885
>gb|AY114607.1| Arabidopsis thaliana succinyl-CoA synthetase alpha subunit (At5g23250) mRNA, complete cds Length = 1119 Score = 99.6 bits (50), Expect = 1e-17 Identities = 185/230 (80%) Strand = Plus / Minus Query: 473 atttctccaatgagaacaataccttctgtctgaggatcatccacaaacttttcaaggcag 532 ||||||||||||||||| ||||||||||| || || ||| | | ||||| || | |||| Sbjct: 764 atttctccaatgagaacgataccttctgtttgggggtcaacaaagaacttctccaagcag 705 Query: 533 tcaacaaaattagtgccgttaaaggggtcaccacccatgcccacacaagttgactgcccc 592 ||||||||||| || || ||||| || || ||||| || || |||||||| || |||||| Sbjct: 704 tcaacaaaatttgtcccattaaacggatccccaccaattcctacacaagtagattgcccc 645 Query: 593 aagcctacggctgttgtttgaaacaccgcttcatatgtcaaggtaccagaacgagatact 652 || ||||| || || ||||| || || |||||||||||||| || ||||| ||||| || Sbjct: 644 aaacctactgcagtagtttggaaaacagcttcatatgtcaatgttccagatcgagaaaca 585 Query: 653 attccaatgcgtcctggtttgtggatgtaacctggcatgattccaatctt 702 || || || || || ||||| ||||| ||||||||||| |||||||| Sbjct: 584 atccctatcttccccggcttgtgtatgtatcctggcatgatcccaatctt 535 Score = 83.8 bits (42), Expect = 7e-13 Identities = 147/182 (80%) Strand = Plus / Minus Query: 242 tcaaacatggtcgaaccaatcttagctggtgactcgacaacagttaccccagcctccctg 301 |||||||| | || ||||||||||||||||||||| || || | || || || || || Sbjct: 995 tcaaacatcgccgcaccaatcttagctggtgactcaaccaccttaactcctgcgtctctt 936 Query: 302 agtgccttgatcttgtcttgggcagtacccttgccccctgacacaattgctccagcatgg 361 || ||| ||||||||||| || || ||||| || || || ||||| ||||| ||||| Sbjct: 935 aggctctttatcttgtcttgagccgtgcccttaccaccggaaacaatggctcccgcatga 876 Query: 362 cccatgcgacggcccgggggtgcagtaagtccagctatgaatgcaacgacaggcttttct 421 ||||| ||||| || || |||||||||||||| |||||||| ||||| |||||||| ||| Sbjct: 875 cccatacgacgccctggtggtgcagtaagtccggctatgaaagcaactacaggcttgtct 816 Query: 422 gt 423 || Sbjct: 815 gt 814
>gb|AY092994.1| Arabidopsis thaliana succinyl-CoA synthetase, alpha subunit (At5g23250) mRNA, complete cds Length = 1234 Score = 99.6 bits (50), Expect = 1e-17 Identities = 185/230 (80%) Strand = Plus / Minus Query: 473 atttctccaatgagaacaataccttctgtctgaggatcatccacaaacttttcaaggcag 532 ||||||||||||||||| ||||||||||| || || ||| | | ||||| || | |||| Sbjct: 775 atttctccaatgagaacgataccttctgtttgggggtcaacaaagaacttctccaagcag 716 Query: 533 tcaacaaaattagtgccgttaaaggggtcaccacccatgcccacacaagttgactgcccc 592 ||||||||||| || || ||||| || || ||||| || || |||||||| || |||||| Sbjct: 715 tcaacaaaatttgtcccattaaacggatccccaccaattcctacacaagtagattgcccc 656 Query: 593 aagcctacggctgttgtttgaaacaccgcttcatatgtcaaggtaccagaacgagatact 652 || ||||| || || ||||| || || |||||||||||||| || ||||| ||||| || Sbjct: 655 aaacctactgcagtagtttggaaaacagcttcatatgtcaatgttccagatcgagaaaca 596 Query: 653 attccaatgcgtcctggtttgtggatgtaacctggcatgattccaatctt 702 || || || || || ||||| ||||| ||||||||||| |||||||| Sbjct: 595 atccctatcttccccggcttgtgtatgtatcctggcatgatcccaatctt 546 Score = 83.8 bits (42), Expect = 7e-13 Identities = 147/182 (80%) Strand = Plus / Minus Query: 242 tcaaacatggtcgaaccaatcttagctggtgactcgacaacagttaccccagcctccctg 301 |||||||| | || ||||||||||||||||||||| || || | || || || || || Sbjct: 1006 tcaaacatcgccgcaccaatcttagctggtgactcaaccaccttaactcctgcgtctctt 947 Query: 302 agtgccttgatcttgtcttgggcagtacccttgccccctgacacaattgctccagcatgg 361 || ||| ||||||||||| || || ||||| || || || ||||| ||||| ||||| Sbjct: 946 aggctctttatcttgtcttgagccgtgcccttaccaccggaaacaatggctcccgcatga 887 Query: 362 cccatgcgacggcccgggggtgcagtaagtccagctatgaatgcaacgacaggcttttct 421 ||||| ||||| || || |||||||||||||| |||||||| ||||| |||||||| ||| Sbjct: 886 cccatacgacgccctggtggtgcagtaagtccggctatgaaagcaactacaggcttgtct 827 Query: 422 gt 423 || Sbjct: 826 gt 825
>emb|BX831587.1|CNS09YP8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH17ZA06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1404 Score = 97.6 bits (49), Expect = 5e-17 Identities = 206/257 (80%), Gaps = 1/257 (0%) Strand = Plus / Minus Query: 443 gctgcagcatcctcctcagcagtacctccaatttctccaatgagaacaataccttctgtc 502 ||||||||||| || || ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 918 gctgcagcatcttcttctgcagtgcctccgatttctccaatgagaacgataccttctgtt 859 Query: 503 tgaggatcatccacaaacttttcaaggcagtcaacaaaattagtgccgttaaaggggtca 562 ||||||||| | | || || || | |||||| ||||| || || |||||||| ||||| Sbjct: 858 tgaggatcaacaaagaatttctccaagcagtcgacaaagtttgtcccgttaaaagggtcc 799 Query: 563 ccacccatgcccacacaagttgactgccccaagcctacggctgttgtttgaaacaccgct 622 ||||| || || |||||||| || || || | || || || |||||| |||| || ||| Sbjct: 798 ccaccgattcctacacaagtagattggcctagacccactgcagttgttggaaa-acagct 740 Query: 623 tcatatgtcaaggtaccagaacgagatactattccaatgcgtcctggtttgtggatgtaa 682 ||||||||||| || ||||| || || || |||||||| || || ||||||||||| Sbjct: 739 tcatatgtcaatgtgccagatcgtgagacaattccaatcttcccaggcttgtggatgtat 680 Query: 683 cctggcatgattccaat 699 || ||||| |||||||| Sbjct: 679 cccggcataattccaat 663 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 344 acaattgctccagcatggcccatgcgacggcccgggggtgcagtaagtccagctatgaat 403 ||||| ||||| ||||| ||||| ||||| ||||| ||||||||||||||||| || || Sbjct: 1017 acaatggctccggcatgacccattcgacgacccggtggtgcagtaagtccagcaataaaa 958 Query: 404 gcaacgacaggctt 417 ||||| |||||||| Sbjct: 957 gcaacaacaggctt 944
>emb|X69138.1|ATSCOALA A.thaliana mRNA for succinate--CoA ligase (GCP-forming) Length = 1393 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Minus Query: 473 atttctccaatgagaacaataccttctgtctgaggatcatccacaaacttttcaaggcag 532 ||||||||||||||||| ||||||||||| || || ||| | | ||||| || | |||| Sbjct: 777 atttctccaatgagaacgataccttctgtttgggggtcaacaaagaacttctccaagcag 718 Query: 533 tcaacaaaattagtgccgttaaaggggtcaccacccatgcccacacaagttgactgcccc 592 ||||||||||| || || ||||| || || ||||| || || |||||||| || |||||| Sbjct: 717 tcaacaaaatttgtcccattaaacggatccccaccaattcctacacaagtagattgcccc 658 Query: 593 aagcctacggctgttgtttgaaacaccgcttcatatgtcaaggtaccagaacgaga 648 || ||||| || || ||||| || || |||||||||||||| || ||||| ||||| Sbjct: 657 aaacctactgcagtagtttggaaaacagcttcatatgtcaatgttccagatcgaga 602 Score = 65.9 bits (33), Expect = 2e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 311 atcttgtcttgggcagtacccttgccccctgacacaattgctccagcatggcccatgcga 370 ||||||||||| || || ||||| || || || ||||| ||| ||||| ||||| ||| Sbjct: 939 atcttgtcttgagccgtgcccttaccaccggaaacaatgcgtcccgcatgacccatacga 880 Query: 371 cggcccgggggtgcagtaagtccagctatgaatgcaacgacaggcttttctgt 423 || || || |||||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 879 cgccctggtggtgcagtaagtccggctatgaaagcaactacaggcttgtctgt 827
>emb|BX830319.1|CNS09ZZW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZB09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1350 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Minus Query: 473 atttctccaatgagaacaataccttctgtctgaggatcatccacaaacttttcaaggcag 532 ||||||||||||||||| ||||||||||| || || ||| | | ||||| || | |||| Sbjct: 825 atttctccaatgagaacgataccttctgtttgggggtcaacaaagaacttctccaagcag 766 Query: 533 tcaacaaaattagtgccgttaaaggggtcaccacccatgcccacacaagttgactgcccc 592 ||||||||||| || || ||||| || || ||||| || || |||||||| || |||||| Sbjct: 765 tcaacaaaatttgtcccattaaacggatccccaccaattcctacacaagtagattgcccc 706 Query: 593 aagcctacggctgttgtttgaaacaccgcttcatatgtcaaggtaccagaacgaga 648 || ||||| || || ||||| || || |||||||||||||| || ||||| ||||| Sbjct: 705 aaacctactgcagtagtttggaaaacagcttcatatgtcaatgttccagatcgaga 650 Score = 91.7 bits (46), Expect = 3e-15 Identities = 148/182 (81%) Strand = Plus / Minus Query: 242 tcaaacatggtcgaaccaatcttagctggtgactcgacaacagttaccccagcctccctg 301 |||||||| | || ||||||||||||||||||||| || || | || || || || || Sbjct: 1056 tcaaacatcgccgcaccaatcttagctggtgactcaaccaccttaactcctgcgtctctt 997 Query: 302 agtgccttgatcttgtcttgggcagtacccttgccccctgacacaattgctccagcatgg 361 || ||| ||||||||||| || || ||||| || || || ||||| ||||| ||||| Sbjct: 996 aggctctttatcttgtcttgagccgtgcccttaccaccggaaacaatggctcccgcatga 937 Query: 362 cccatgcgacggcccgggggtgcagtaagtccagctatgaatgcaacgacaggcttttct 421 ||||| ||||| || || |||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 936 cccatacgacgccctggtggtgcagtaagtccggctatgaaagcaactacaggcttttct 877 Query: 422 gt 423 || Sbjct: 876 gt 875
>gb|AY087899.1| Arabidopsis thaliana clone 39462 mRNA, complete sequence Length = 1345 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Minus Query: 473 atttctccaatgagaacaataccttctgtctgaggatcatccacaaacttttcaaggcag 532 ||||||||||||||||| ||||||||||| || || ||| | | ||||| || | |||| Sbjct: 835 atttctccaatgagaacgataccttctgtttgggggtcaacaaagaacttctccaagcag 776 Query: 533 tcaacaaaattagtgccgttaaaggggtcaccacccatgcccacacaagttgactgcccc 592 ||||||||||| || || ||||| || || ||||| || || |||||||| || |||||| Sbjct: 775 tcaacaaaatttgtcccattaaacggatccccaccaattcctacacaagtagattgcccc 716 Query: 593 aagcctacggctgttgtttgaaacaccgcttcatatgtcaaggtaccagaacgaga 648 || ||||| || || ||||| || || |||||||||||||| || ||||| ||||| Sbjct: 715 aaacctactgcagtagtttggaaaacagcttcatatgtcaatgttccagatcgaga 660 Score = 79.8 bits (40), Expect = 1e-11 Identities = 94/112 (83%) Strand = Plus / Minus Query: 312 tcttgtcttgggcagtacccttgccccctgacacaattgctccagcatggcccatgcgac 371 |||||||||| || || ||||| || || || ||||| ||||| ||||| ||||| |||| Sbjct: 996 tcttgtcttgagccgtgcccttaccaccggaaacaatggctcccgcatgacccatacgac 937 Query: 372 ggcccgggggtgcagtaagtccagctatgaatgcaacgacaggcttttctgt 423 | || || |||||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 936 gccctggtggtgcagtaagtccggctatgaaagcaactacaggcttgtctgt 885
>gb|DQ002407.1| Zea mays copia retrotransposon opie1, gypsy retrotransposon grande1, xilon1 retrotransposon, helitron B73_14578, gypsy retrotransposon huck1 and ruda retrotransposon, complete sequence Length = 152384 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 557 gggtcaccacccatgcccacacaagttgactgccccaagcctacggctgttgtttgaaac 616 ||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 19111 gggtcaccaccaatgcctacacaagttgactgccccaaacctacagctgttgtttgaaac 19052 Query: 617 ac 618 || Sbjct: 19051 ac 19050
>gb|AC157350.29| Medicago truncatula clone mth2-143n6, complete sequence Length = 131960 Score = 87.7 bits (44), Expect = 5e-14 Identities = 101/120 (84%) Strand = Plus / Plus Query: 229 ctgcttgaaaatttcaaacatggtcgaaccaatcttagctggtgactcgacaacagttac 288 ||||||||||||||||||||||| | ||||| |||||||| ||||| ||||| || || Sbjct: 52027 ctgcttgaaaatttcaaacatggcagctccaattttagctggggactccacaactgtcac 52086 Query: 289 cccagcctccctgagtgccttgatcttgtcttgggcagtacccttgccccctgacacaat 348 ||||| |||||||| | |||| |||||||| |||||||||||||| || |||||||| Sbjct: 52087 tccagcttccctgagggtgctgattttgtcttgagcagtacccttgccacccgacacaat 52146 Score = 83.8 bits (42), Expect = 7e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 616 caccgcttcatatgtcaaggtaccagaacgagatactattccaatgcgtcctggtttgtg 675 |||||||||||||||||| || || |||||||| || ||||| |||||||| ||||| || Sbjct: 54318 caccgcttcatatgtcaaagttccggaacgagaaacaattcctatgcgtccaggtttatg 54377 Query: 676 gatgtaacctggcatgat 693 ||||||||||||||||| Sbjct: 54378 aatgtaacctggcatgat 54395
>dbj|AB007648.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKD15 Length = 76329 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 351 ctccagcatggcccatgcgacggcccgggggtgcagtaagtccagctatgaatgcaacga 410 |||| ||||| ||||| ||||| || || |||||||||||||| |||||||| ||||| | Sbjct: 43386 ctcccgcatgacccatacgacgccctggtggtgcagtaagtccggctatgaaagcaacta 43327 Query: 411 caggcttttctgt 423 ||||||| ||||| Sbjct: 43326 caggcttgtctgt 43314 Score = 48.1 bits (24), Expect = 0.040 Identities = 60/72 (83%) Strand = Plus / Minus Query: 529 gcagtcaacaaaattagtgccgttaaaggggtcaccacccatgcccacacaagttgactg 588 ||||||||||||||| || || ||||| || || ||||| || || |||||||| || || Sbjct: 42855 gcagtcaacaaaatttgtcccattaaacggatccccaccaattcctacacaagtagattg 42796 Query: 589 ccccaagcctac 600 |||||| ||||| Sbjct: 42795 ccccaaacctac 42784 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 242 tcaaacatggtcgaaccaatcttagctggtgactc 276 |||||||| | || ||||||||||||||||||||| Sbjct: 43589 tcaaacatcgccgcaccaatcttagctggtgactc 43555 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 atttctccaatgagaacaatacct 496 ||||||||||||||||| |||||| Sbjct: 43176 atttctccaatgagaacgatacct 43153 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 671 ttgtggatgtaacctggcatgattccaatctt 702 ||||| ||||| ||||||||||| |||||||| Sbjct: 42505 ttgtgtatgtatcctggcatgatcccaatctt 42474
>emb|AL392174.1|ATF8L15 Arabidopsis thaliana DNA chromosome 5, BAC clone F8L15 (ESSA project) Length = 125411 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 351 ctccagcatggcccatgcgacggcccgggggtgcagtaagtccagctatgaatgcaacga 410 |||| ||||| ||||| ||||| ||||| ||||||||||||||||| || || ||||| | Sbjct: 33257 ctccggcatgacccattcgacgacccggtggtgcagtaagtccagcaataaaagcaacaa 33198 Query: 411 caggctt 417 ||||||| Sbjct: 33197 caggctt 33191 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 443 gctgcagcatcctcctcagcagtacctccaatttctccaatgagaacaatacct 496 ||||||||||| || || ||||| ||||| ||||||||||||||||| |||||| Sbjct: 33064 gctgcagcatcttcttctgcagtgcctccgatttctccaatgagaacgatacct 33011 Score = 48.1 bits (24), Expect = 0.040 Identities = 66/80 (82%) Strand = Plus / Minus Query: 620 gcttcatatgtcaaggtaccagaacgagatactattccaatgcgtcctggtttgtggatg 679 ||||||||||||||||| ||||| || || || |||||||| || || ||||||||| Sbjct: 32377 gcttcatatgtcaaggttccagatcgtgagacaattccaatcttcccaggcttgtggatg 32318 Query: 680 taacctggcatgattccaat 699 || || ||||| |||||||| Sbjct: 32317 tatcccggcataattccaat 32298
>gb|AF258272.1|AF258272 Brassica rapa cultivar R500 succinyl-CoA-ligase alpha subunit (MKD15-6-BR-1) gene, partial cds Length = 460 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 529 gcagtcaacaaaattagtgccgttaaaggggtcaccacccatgcccacacaagttgactg 588 ||||||||||||||| ||||||||||| || || ||||| || || ||||| || ||||| Sbjct: 208 gcagtcaacaaaatttgtgccgttaaaaggatccccaccaattcctacacacgtagactg 149 Query: 589 ccccaagcctac 600 |||| |||||| Sbjct: 148 tcccaggcctac 137
>gb|AF258268.1|AF258268 Brassica napus cultivar Yudal succinyl-CoA-ligase alpha subunit (MKD15-6-BN-3) gene, partial cds Length = 551 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 529 gcagtcaacaaaattagtgccgttaaaggggtcaccacccatgcccacacaagttgactg 588 ||||||||||||||| ||||||||||| || || ||||| || || ||||| || ||||| Sbjct: 278 gcagtcaacaaaatttgtgccgttaaaaggatccccaccaattcctacacacgtagactg 219 Query: 589 ccccaagcctac 600 |||| |||||| Sbjct: 218 tcccaggcctac 207
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Plus Query: 536 acaaaattagtgccgttaaaggggtcaccacccatgcccacacaagttgactgccccaag 595 |||||||||||||| |||| ||| ||||| || ||||| ||||| || || || || | Sbjct: 1319715 acaaaattagtgccattaacgggatcaccgccaatgccaacacatgtagattgaccaagc 1319774 Query: 596 cctacggctgttgtttg 612 ||||||||||||||||| Sbjct: 1319775 cctacggctgttgtttg 1319791
>dbj|AK114572.1| Ciona intestinalis cDNA, clone:cieg007a19, full insert sequence Length = 1059 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 350 gctccagcatggcccatgcgacggcccgggggtgcagtaagtccagctatgaa 402 ||||||||||| |||||||| | ||| || ||||||||||| ||||| ||||| Sbjct: 559 gctccagcatgccccatgcgcctgccaggtggtgcagtaagaccagcaatgaa 507 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Minus Query: 467 cctccaatttctccaatgagaacaataccttctgtctgaggatcat 512 |||||||||||||| ||||| | || ||||| ||||||||||||| Sbjct: 433 cctccaatttctccgatgaggaggattccttcggtctgaggatcat 388
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 48.1 bits (24), Expect = 0.040 Identities = 48/56 (85%) Strand = Plus / Plus Query: 329 cccttgccccctgacacaattgctccagcatggcccatgcgacggcccgggggtgc 384 |||||||| || ||||| || || || |||||||||||||| |||||||| ||||| Sbjct: 2342442 cccttgccgcccgacacgatcgcgccggcatggcccatgcggcggcccggcggtgc 2342497
>gb|AE004282.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 190 of 251 of the complete chromosome Length = 13009 Score = 48.1 bits (24), Expect = 0.040 Identities = 75/92 (81%) Strand = Plus / Plus Query: 557 gggtcaccacccatgcccacacaagttgactgccccaagcctacggctgttgtttgaaac 616 ||||| ||||| ||||||||||| || ||||| || || ||| || |||| ||||| Sbjct: 7004 gggtcgccaccgatgcccacacaggtagactggccgaaaccttcgtctgtggtttgttta 7063 Query: 617 accgcttcatatgtcaaggtaccagaacgaga 648 ||||||||||| ||||| |||||||| ||||| Sbjct: 7064 accgcttcataagtcaaagtaccagagcgaga 7095
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 48.1 bits (24), Expect = 0.040 Identities = 60/72 (83%) Strand = Plus / Minus Query: 304 tgccttgatcttgtcttgggcagtacccttgccccctgacacaattgctccagcatggcc 363 |||||||||||| |||| ||| || || ||||| ||||| || || ||||| || || || Sbjct: 282912 tgccttgatcttctcttcggcggtgcctttgccgcctgaaacgatcgctcccgcgtgacc 282853 Query: 364 catgcgacggcc 375 |||||||||||| Sbjct: 282852 catgcgacggcc 282841
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Plus Query: 444 ctgcagcatcctcctcagcagtacctccaatttctccaatgagaacaataccttc 498 ||||||| || |||||||||||||| || || || |||||||||| |||||||| Sbjct: 581158 ctgcagcctcttcctcagcagtaccaccgatctcaccaatgagaatgataccttc 581212
>gb|AC091330.18| Trypanosoma brucei chromosome 3 clone RPCI93-48O8, complete sequence Length = 138368 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 444 ctgcagcatcctcctcagcagtacctccaatttctccaatgagaacaataccttc 498 ||||||| || |||||||||||||| || || || |||||||||| |||||||| Sbjct: 122000 ctgcagcctcttcctcagcagtaccaccgatctcaccaatgagaatgataccttc 121946
>ref|XM_821509.1| Trypanosoma brucei TREU927 clone RPCI93-48O8 succinyl-CoA synthetase subunit alpha (Tb927.3.2230) partial mRNA Length = 906 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 444 ctgcagcatcctcctcagcagtacctccaatttctccaatgagaacaataccttc 498 ||||||| || |||||||||||||| || || || |||||||||| |||||||| Sbjct: 679 ctgcagcctcttcctcagcagtaccaccgatctcaccaatgagaatgataccttc 625
>ref|NM_001019653.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC16E8.17c), partial mRNA Length = 996 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Minus Query: 449 gcatcctcctcagcagtacctccaatttctccaatgagaacaataccttctgtctgagga 508 |||||||| |||||| |||| ||||| || |||||||| | ||| |||| ||| | |||| Sbjct: 752 gcatcctcttcagcactaccaccaatctcaccaatgaggataattccttgtgtgttagga 693 Query: 509 tcatcca 515 ||||||| Sbjct: 692 tcatcca 686
>gb|AF258271.1|AF258271 Brassica oleracea cultivar Rapid Cycling succinyl-CoA-ligase alpha subunit (MKD15-6-BO-2) gene, partial cds Length = 591 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 529 gcagtcaacaaaattagtgccgttaaa 555 ||||||||||||||| ||||||||||| Sbjct: 334 gcagtcaacaaaatttgtgccgttaaa 308
>gb|AF258269.1|AF258269 Brassica napus cultivar Yudal succinyl-CoA-ligase alpha subunit (MKD15-6-BN-4) gene, partial cds Length = 600 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 529 gcagtcaacaaaattagtgccgttaaa 555 ||||||||||||||| ||||||||||| Sbjct: 334 gcagtcaacaaaatttgtgccgttaaa 308
>emb|Z98529.1|SPAC16E8 S.pombe chromosome I cosmid c16E8 Length = 37301 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 449 gcatcctcctcagcagtacctccaatttctccaatgagaacaataccttctgtctgagga 508 |||||||| |||||| |||| ||||| || |||||||| | ||| |||| ||| | |||| Sbjct: 35009 gcatcctcttcagcactaccaccaatctcaccaatgaggataattccttgtgtgttagga 35068 Query: 509 tcatcca 515 ||||||| Sbjct: 35069 tcatcca 35075
>gb|AF035394.1|AF035394 Columba livia GTP-specific succinyl-CoA synthetase alpha subunit (SCS) mRNA, partial cds Length = 1169 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 524 tcaaggcagtcaacaaaattagtgccgttaaaggg 558 ||||||||||||| ||||||||| ||||| ||||| Sbjct: 602 tcaaggcagtcaataaaattagttccgttgaaggg 568
>gb|AF035393.1|AF035393 Columba livia ATP-specific succinyl-CoA synthetase alpha subunit (SCS) mRNA, partial cds Length = 1169 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 524 tcaaggcagtcaacaaaattagtgccgttaaaggg 558 ||||||||||||| ||||||||| ||||| ||||| Sbjct: 602 tcaaggcagtcaataaaattagttccgttgaaggg 568
>ref|NM_128295.3| Arabidopsis thaliana carboxylic ester hydrolase/ hydrolase, acting on ester bonds AT2G27360 mRNA, complete cds Length = 1357 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 cctccaatttctccaatgagaa 488 |||||||||||||||||||||| Sbjct: 565 cctccaatttctccaatgagaa 544
>gb|AC115967.11| Mus musculus chromosome 8, clone RP24-72G22, complete sequence Length = 221435 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 ggaaaggaaaaggaaaaaggga 88 |||||||||||||||||||||| Sbjct: 64592 ggaaaggaaaaggaaaaaggga 64571
>gb|AE008620.1| Rickettsia conorii str. Malish 7, section 52 of 114 of the complete genome Length = 11570 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 533 tcaacaaaattagtgccgttaa 554 |||||||||||||||||||||| Sbjct: 8817 tcaacaaaattagtgccgttaa 8838
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 353 ccagcatggcccatgcgacggcccgg 378 ||||||||||||||||| |||||||| Sbjct: 806288 ccagcatggcccatgcggcggcccgg 806313
>ref|XM_532985.2| PREDICTED: Canis familiaris similar to succinate-CoA ligase, GDP-forming, alpha subunit (LOC475775), mRNA Length = 1167 Score = 44.1 bits (22), Expect = 0.62 Identities = 49/58 (84%) Strand = Plus / Minus Query: 522 tttcaaggcagtcaacaaaattagtgccgttaaaggggtcaccacccatgcccacaca 579 ||||||||||||||| ||||| ||||| ||||| || ||||| || ||||| ||||| Sbjct: 718 tttcaaggcagtcaataaaatctgtgccattaaaaggatcacctccaatgccaacaca 661
>gb|AC174830.3| Myotis lucifugus clone CH235-234J19, complete sequence Length = 196835 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 59 taagacagggaaaggaaaaggaaaaaggga 88 |||||||||||||||||||| |||| |||| Sbjct: 64055 taagacagggaaaggaaaagaaaaatggga 64026
>gb|AC121601.4| Mus musculus BAC clone RP23-305F2 from 1, complete sequence Length = 190653 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 agggaaaggaaaaggaaaaagg 86 |||||||||||||||||||||| Sbjct: 147998 agggaaaggaaaaggaaaaagg 148019
>gb|AC112273.4| Mus musculus BAC clone RP24-122H5 from 3, complete sequence Length = 180155 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 agggaaaggaaaaggaaaaagg 86 |||||||||||||||||||||| Sbjct: 145027 agggaaaggaaaaggaaaaagg 145048
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 533 tcaacaaaattagtgccgttaa 554 |||||||||||||||||||||| Sbjct: 712076 tcaacaaaattagtgccgttaa 712097
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 620 gcttcatatgtcaaggtaccagaacgagatacta 653 ||||||||||| || ||||| ||||||||||||| Sbjct: 1261560 gcttcatatgttaatgtacctgaacgagatacta 1261527
>emb|AL833772.8| Mouse DNA sequence from clone RP23-154K13 on chromosome 11 Contains the 3' end of the Vps54 gene for vacuolar protein sorting 54 (yeast), an H+ transporting mitochondrial ATP synthase F0 complex subunit g (Atp5l) pseudogene and the 3' end of the Ugp2 gene for UDP-glucose pyrophosphorylase 2, complete sequence Length = 54149 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 agggaaaggaaaaggaaaaagg 86 |||||||||||||||||||||| Sbjct: 49101 agggaaaggaaaaggaaaaagg 49080
>emb|AJ293312.1|RMO293312 Rickettsia montanensis ompR gene (partial), ilvE gene, dapA gene, smpB gene, rp431 gene, sucD gene and sucC gene (partial) Length = 5780 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 533 tcaacaaaattagtgccgttaa 554 |||||||||||||||||||||| Sbjct: 4289 tcaacaaaattagtgccgttaa 4310
>emb|AL731562.10| Mouse DNA sequence from clone RP23-49B3 on chromosome 13, complete sequence Length = 81954 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 agggaaaggaaaaggaaaaagg 86 |||||||||||||||||||||| Sbjct: 5998 agggaaaggaaaaggaaaaagg 5977
>gb|AC006233.4| Arabidopsis thaliana chromosome 2 clone F12K2 map B68, complete sequence Length = 88383 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 467 cctccaatttctccaatgagaa 488 |||||||||||||||||||||| Sbjct: 19346 cctccaatttctccaatgagaa 19367
>gb|AC006232.4| Arabidopsis thaliana chromosome 2 clone F10A12 map B68, complete sequence Length = 90341 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 cctccaatttctccaatgagaa 488 |||||||||||||||||||||| Sbjct: 12077 cctccaatttctccaatgagaa 12056
>gb|AC109461.3| Homo sapiens chromosome 5 clone RP11-269G2, complete sequence Length = 89234 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 288 ccccagcctccctgagtgcctt 309 |||||||||||||||||||||| Sbjct: 48023 ccccagcctccctgagtgcctt 48002
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 620 gcttcatatgtcaaggtaccagaacgagatacta 653 ||||||||||| || ||||| ||||||||||||| Sbjct: 1272321 gcttcatatgttaatgtacctgaacgagatacta 1272288
>gb|AC159021.2| Pan troglodytes BAC clone CH251-508C8 from chromosome unknown, complete sequence Length = 240827 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 ggaaaggaaaaggaaaaaggga 88 |||||||||||||||||||||| Sbjct: 102734 ggaaaggaaaaggaaaaaggga 102755
>gb|AC034228.6| Homo sapiens chromosome 5 clone CTD-2198K16, complete sequence Length = 183378 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 ggaaaggaaaaggaaaaaggga 88 |||||||||||||||||||||| Sbjct: 48829 ggaaaggaaaaggaaaaaggga 48808
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 620 gcttcatatgtcaaggtaccagaacgagatacta 653 ||||||||||| || ||||| ||||||||||||| Sbjct: 1168555 gcttcatatgttaatgtacctgaacgagatacta 1168522
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 620 gcttcatatgtcaaggtaccagaacgagatacta 653 ||||||||||| || ||||| ||||||||||||| Sbjct: 1248501 gcttcatatgttaatgtacctgaacgagatacta 1248468
>gb|AC034216.5| Homo sapiens chromosome 5 clone CTD-2004C12, complete sequence Length = 178405 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 ggaaaggaaaaggaaaaaggga 88 |||||||||||||||||||||| Sbjct: 112040 ggaaaggaaaaggaaaaaggga 112019
>emb|BX819145.1|CNS0A8UI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB51ZC01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1343 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 cctccaatttctccaatgagaa 488 |||||||||||||||||||||| Sbjct: 565 cctccaatttctccaatgagaa 544
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 620 gcttcatatgtcaaggtaccagaacgagatacta 653 ||||||||||| || ||||| ||||||||||||| Sbjct: 1233065 gcttcatatgttaatgtacctgaacgagatacta 1233032
>emb|BX682231.5| Mouse DNA sequence from clone RP24-369N16 on chromosome 2, complete sequence Length = 48121 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 183 ttcttttctactgtaccatttcttct 208 |||||||||||||| ||||||||||| Sbjct: 29133 ttcttttctactgttccatttcttct 29108
>dbj|AK176905.1| Arabidopsis thaliana mRNA for putative lipase, partial cds, clone: RAFL25-47-I20 Length = 1345 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 467 cctccaatttctccaatgagaa 488 |||||||||||||||||||||| Sbjct: 520 cctccaatttctccaatgagaa 499
>emb|AJ243856.1|MMU243856 Mus musculus Lhx9 gene for putative LIM homeodomain protein, exon 5 Length = 898 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 gggaaaggaaaaggaaaaaggg 87 |||||||||||||||||||||| Sbjct: 123 gggaaaggaaaaggaaaaaggg 144
>gb|AC162280.4| Mus musculus chromosome 3, clone RP24-240C19, complete sequence Length = 165299 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 agggaaaggaaaaggaaaaagg 86 |||||||||||||||||||||| Sbjct: 37254 agggaaaggaaaaggaaaaagg 37275
>gb|M38776.1|PFAMBNCB P.knowlesi Mbn-cutting sites in lambda KBS50 Length = 2824 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 agggaaaggaaaaggaaaaagg 86 |||||||||||||||||||||| Sbjct: 2650 agggaaaggaaaaggaaaaagg 2671
>ref|NM_104276.1| Arabidopsis thaliana carboxylic ester hydrolase/ hydrolase, acting on ester bonds / lipase AT1G53990 mRNA, complete cds Length = 1104 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 acaaaaagaagtttcccgatgtttt 184 |||| |||||||||||||||||||| Sbjct: 737 acaacaagaagtttcccgatgtttt 761
>gb|AC107734.13| Mus musculus chromosome 7, clone RP23-399E4, complete sequence Length = 198485 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 gggaaaggaaaaggaaaaagg 86 ||||||||||||||||||||| Sbjct: 45771 gggaaaggaaaaggaaaaagg 45751
>gb|AC120180.19| Mus musculus chromosome 1, clone RP24-499I2, complete sequence Length = 183516 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 60 aagacagggaaaggaaaaggaaaaa 84 |||| |||||||||||||||||||| Sbjct: 32764 aagaaagggaaaggaaaaggaaaaa 32740
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 aattgctccagcatggcccat 366 ||||||||||||||||||||| Sbjct: 578569 aattgctccagcatggcccat 578549
>gb|AC100835.2| Homo sapiens chromosome 15, clone CTD-3154N5, complete sequence Length = 165036 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 gggaaaggaaaaggaaaaagg 86 ||||||||||||||||||||| Sbjct: 59615 gggaaaggaaaaggaaaaagg 59595
>gb|AC098566.3| Oryza sativa chromosome 10 clone OSJNBa0051J07, complete sequence Length = 148301 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaagggac 89 ||||||||||||||||||||| Sbjct: 62845 aaaggaaaaggaaaaagggac 62865
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaagggac 89 ||||||||||||||||||||| Sbjct: 10913599 aaaggaaaaggaaaaagggac 10913619 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 aaaggaaaaggaaaaagggac 89 ||||||||||||||||||||| Sbjct: 9917961 aaaggaaaaggaaaaagggac 9917941
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaagggac 89 ||||||||||||||||||||| Sbjct: 4915924 aaaggaaaaggaaaaagggac 4915944 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 3190765 aaaggaaaaggaaaaaggga 3190784
>gb|AC018462.4| Homo sapiens BAC clone RP11-270B14 from 2, complete sequence Length = 189326 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 agggaaaggaaaaggaaaaag 85 ||||||||||||||||||||| Sbjct: 88881 agggaaaggaaaaggaaaaag 88901
>gb|AC006577.2|F15I1 Sequence of BAC F15I1 from Arabidopsis thaliana chromosome 1, complete sequence Length = 89035 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 acaaaaagaagtttcccgatgtttt 184 |||| |||||||||||||||||||| Sbjct: 12630 acaacaagaagtttcccgatgtttt 12654
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaagggac 89 ||||||||||||||||||||| Sbjct: 4916711 aaaggaaaaggaaaaagggac 4916731 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 3190686 aaaggaaaaggaaaaaggga 3190705
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaagggac 89 ||||||||||||||||||||| Sbjct: 10913298 aaaggaaaaggaaaaagggac 10913318 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 aaaggaaaaggaaaaagggac 89 ||||||||||||||||||||| Sbjct: 9917846 aaaggaaaaggaaaaagggac 9917826
>emb|AL954152.5|CNS08CCQ Oryza sativa chromosome 12, . BAC OSJNBb0034E16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124204 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaagggac 89 ||||||||||||||||||||| Sbjct: 62662 aaaggaaaaggaaaaagggac 62682
>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140806 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaagggac 89 ||||||||||||||||||||| Sbjct: 14509 aaaggaaaaggaaaaagggac 14529
>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome Length = 1173390 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 455 tcctcagcagtacctccaatttctccaat 483 ||||||||| ||||||| ||||||||||| Sbjct: 897865 tcctcagcactacctccgatttctccaat 897893
>dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA, complete genome Length = 697724 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 620 gcttcatatgtcaaggtaccagaacgagatactattccaat 660 |||||||||||||| || ||||| | ||||| ||||||||| Sbjct: 478412 gcttcatatgtcaaagttccagacctagatattattccaat 478452
>gb|AC149371.2| Phakopsora pachyrhizi clone JGIAFNA-53G19, complete sequence Length = 40450 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 cttttctactgtaccatttcttct 208 |||| ||||||||||||||||||| Sbjct: 31635 ctttcctactgtaccatttcttct 31612
>gb|AC122357.4| Mus musculus BAC clone RP23-403O8 from chromosome 13, complete sequence Length = 203039 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ggaaaggaaaaggaaaaagg 86 |||||||||||||||||||| Sbjct: 112337 ggaaaggaaaaggaaaaagg 112356
>gb|AF003389.2| Caenorhabditis elegans cosmid F23H11, complete sequence Length = 30610 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 683 cctggcatgattccaatctt 702 |||||||||||||||||||| Sbjct: 4991 cctggcatgattccaatctt 5010
>gb|AC159290.2| Mus musculus BAC clone RP23-291I2 from chromosome 13, complete sequence Length = 231853 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ggaaaggaaaaggaaaaagg 86 |||||||||||||||||||| Sbjct: 2146 ggaaaggaaaaggaaaaagg 2165
>ref|NM_001030851.1| Gallus gallus protein phosphatase 1, regulatory (inhibitor) subunit 16B (PPP1R16B), mRNA Length = 3084 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 ctccaatttctccaatgaga 487 |||||||||||||||||||| Sbjct: 1712 ctccaatttctccaatgaga 1693
>ref|XM_470226.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2262 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tctactgtaccatttcttct 208 |||||||||||||||||||| Sbjct: 365 tctactgtaccatttcttct 346
>gb|AC159438.1| Trypanosoma brucei chromosome 8 clone RPCI93-29O4, complete sequence Length = 138187 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agggaaaggaaaaggaaaaa 84 |||||||||||||||||||| Sbjct: 30154 agggaaaggaaaaggaaaaa 30173
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agggaaaggaaaaggaaaaa 84 |||||||||||||||||||| Sbjct: 347607 agggaaaggaaaaggaaaaa 347626
>gb|AC115060.9| Mus musculus chromosome 1, clone RP24-395F2, complete sequence Length = 172482 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gggaaaggaaaaggaaaaag 85 |||||||||||||||||||| Sbjct: 67199 gggaaaggaaaaggaaaaag 67180
>gb|AC131966.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0028C16, complete sequence Length = 151030 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 53640 aaaggaaaaggaaaaaggga 53659
>gb|AC116452.9| Mus musculus chromosome 1, clone RP24-287C2, complete sequence Length = 171792 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gggaaaggaaaaggaaaaag 85 |||||||||||||||||||| Sbjct: 66359 gggaaaggaaaaggaaaaag 66378 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 19060 aaaggaaaaggaaaaaggga 19079
>ref|XM_957878.1| Neurospora crassa OR74A hypothetical protein (NCU07591.1) partial mRNA Length = 2832 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 2451 aaaggaaaaggaaaaaggga 2470
>ref|XM_328296.1| Neurospora crassa OR74A hypothetical protein (NCU07591.1) partial mRNA Length = 2832 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 2451 aaaggaaaaggaaaaaggga 2470
>gb|AC146127.4| Pan troglodytes BAC clone RP43-23F10 from 7, complete sequence Length = 190149 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 ctgaggatcatccacaaact 521 |||||||||||||||||||| Sbjct: 178778 ctgaggatcatccacaaact 178797
>gb|AE007300.1| Sinorhizobium meliloti 1021 plasmid pSymA section 106 of 121 of the complete plasmid sequence Length = 10911 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 gcaacgacaggcttttctgttttg 427 ||||||||||||| |||||||||| Sbjct: 10124 gcaacgacaggctcttctgttttg 10147
>gb|AC147555.2| Mus musculus BAC clone RP23-478E6 from chromosome 5, complete sequence Length = 176491 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 agggaaaggaaaaggaaaaaggga 88 ||||||||||||||| |||||||| Sbjct: 155691 agggaaaggaaaagggaaaaggga 155714
>gb|AC138737.10| Mus musculus chromosome 5, clone RP23-307F20, complete sequence Length = 216064 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 agggaaaggaaaaggaaaaa 84 |||||||||||||||||||| Sbjct: 144713 agggaaaggaaaaggaaaaa 144694
>gb|AC165946.4| Mus musculus chromosome 1, clone RP24-167M10, complete sequence Length = 157434 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gggaaaggaaaaggaaaaag 85 |||||||||||||||||||| Sbjct: 117713 gggaaaggaaaaggaaaaag 117732
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tctactgtaccatttcttct 208 |||||||||||||||||||| Sbjct: 2662271 tctactgtaccatttcttct 2662290
>gb|AC161345.4| Mus musculus chromosome 5, clone RP23-189N6, complete sequence Length = 177864 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 60634 aaaggaaaaggaaaaaggga 60615
>gb|AC132284.5| Mus musculus BAC clone RP24-351O18 from chromosome 5, complete sequence Length = 174681 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ctgtaccatttcttctctct 212 |||||||||||||||||||| Sbjct: 111029 ctgtaccatttcttctctct 111010
>gb|AC159715.5| Mus musculus 6 BAC RP23-367A13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209869 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ggaaaggaaaaggaaaaagg 86 |||||||||||||||||||| Sbjct: 184475 ggaaaggaaaaggaaaaagg 184456
>gb|AC068663.5| Mus musculus strain C57BL6/J chromosome 5 clone RP23-280D18, complete sequence Length = 221134 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 57478 aaaggaaaaggaaaaaggga 57459 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 57413 aaaggaaaaggaaaaaggga 57394
>gb|AC006039.3| Homo sapiens BAC clone RP11-319F3 from 7, complete sequence Length = 176257 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 ctgaggatcatccacaaact 521 |||||||||||||||||||| Sbjct: 14540 ctgaggatcatccacaaact 14559
>gb|AC146006.2| Pan troglodytes BAC clone RP43-165A19 from 7, complete sequence Length = 211780 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 ctgaggatcatccacaaact 521 |||||||||||||||||||| Sbjct: 61288 ctgaggatcatccacaaact 61269
>ref|XM_534611.2| PREDICTED: Canis familiaris similar to IQ motif containing with AAA domain (LOC477415), mRNA Length = 3740 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 3216 aaaggaaaaggaaaaaggga 3235
>emb|CT009577.5| Mouse DNA sequence from clone RP23-24C24 on chromosome 16, complete sequence Length = 258862 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 agggaaaggaaaaggaaaaaggga 88 ||||||||||||||||||| |||| Sbjct: 159949 agggaaaggaaaaggaaaagggga 159972
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 40.1 bits (20), Expect = 9.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 668 ggtttgtggatgtaacctggcatgattccaatctta 703 ||||||||||| | ||| |||||||| ||||||||| Sbjct: 1711967 ggtttgtggatatgaccaggcatgataccaatctta 1712002
>gb|AC146236.3| Pan troglodytes BAC clone RP43-27L10 from 7, complete sequence Length = 184346 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 ctgaggatcatccacaaact 521 |||||||||||||||||||| Sbjct: 9169 ctgaggatcatccacaaact 9188
>emb|Z66567.1|CEZK455 Caenorhabditis elegans Cosmid ZK455, complete sequence Length = 33904 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 9072 aaaggaaaaggaaaaaggga 9091
>gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosome 6, complete sequence Length = 210092 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gggaaaggaaaaggaaaaag 85 |||||||||||||||||||| Sbjct: 113637 gggaaaggaaaaggaaaaag 113618
>gb|AC131691.4| Mus musculus BAC clone RP23-388P2 from chromosome 16, complete sequence Length = 202652 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cagggaaaggaaaaggaaaa 83 |||||||||||||||||||| Sbjct: 103274 cagggaaaggaaaaggaaaa 103293
>gb|AC025448.6| Homo sapiens chromosome 5 clone CTD-2113L7, complete sequence Length = 164190 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 21811 aaaggaaaaggaaaaaggga 21792
>gb|AC126438.3| Mus musculus BAC clone RP24-255G1 from chromosome 17, complete sequence Length = 152802 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 agggaaaggaaaaggaaaaaggga 88 ||||||||||||||| |||||||| Sbjct: 137571 agggaaaggaaaagggaaaaggga 137594
>gb|AC129015.4| Mus musculus BAC clone RP24-364A8 from chromosome 5, complete sequence Length = 165259 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 agggaaaggaaaaggaaaaaggga 88 ||||||||||||||| |||||||| Sbjct: 128248 agggaaaggaaaagggaaaaggga 128225
>gb|AC121828.3| Mus musculus BAC clone RP23-478K4 from chromosome 1, complete sequence Length = 179626 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 cttttctgttttgctctccc 434 |||||||||||||||||||| Sbjct: 143906 cttttctgttttgctctccc 143887
>gb|AC124185.3| Mus musculus BAC clone RP23-230F5 from 1, complete sequence Length = 195372 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 80743 aaaggaaaaggaaaaaggga 80724 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gggaaaggaaaaggaaaaag 85 |||||||||||||||||||| Sbjct: 33443 gggaaaggaaaaggaaaaag 33424
>ref|XM_546508.2| PREDICTED: Canis familiaris beta-site APP-cleaving enzyme 1 (BACE1), mRNA Length = 2445 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ttcccgatgttttcttttct 191 |||||||||||||||||||| Sbjct: 2020 ttcccgatgttttcttttct 2039
>gb|AC113541.10| Mus musculus chromosome 5, clone RP23-185N2, complete sequence Length = 210222 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 139656 aaaggaaaaggaaaaaggga 139675 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 139591 aaaggaaaaggaaaaaggga 139610
>gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, complete sequence Length = 211926 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 ccatttcttctctctactct 217 |||||||||||||||||||| Sbjct: 180392 ccatttcttctctctactct 180373
>ref|XM_675277.1| Plasmodium berghei strain ANKA hypothetical protein (PB000153.01.0) partial mRNA Length = 1056 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 175 aaaggaaaaggaaaaaggga 194
>gb|AC144479.1| Pan troglodytes BAC clone RP43-126P12 from 7, complete sequence Length = 211515 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 taaaggctgcagcatcctcc 457 |||||||||||||||||||| Sbjct: 22025 taaaggctgcagcatcctcc 22044
>gb|AC120736.4| Rattus norvegicus 11 BAC CH230-252B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 82009 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cagggaaaggaaaaggaaaa 83 |||||||||||||||||||| Sbjct: 27732 cagggaaaggaaaaggaaaa 27751
>gb|AC107781.9| Mus musculus, clone RP23-56O1, complete sequence Length = 174437 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 agggaaaggaaaaggaaaaa 84 |||||||||||||||||||| Sbjct: 79691 agggaaaggaaaaggaaaaa 79672
>emb|CR788268.5| Human DNA sequence from clone RP11-24B13 on chromosome 9 Contains the 3' end of the gene for a novel protein similar to contactin associated protein-like 3 (CNTNAP3) and an RNA binding motif protein 17 (RBM17) pseudogene, complete sequence Length = 164026 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gaaaaggaaaaagggactga 92 |||||||||||||||||||| Sbjct: 112709 gaaaaggaaaaagggactga 112728
>emb|BX005040.12| Human DNA sequence from clone RP11-101E5 on chromosome 9 Contains two novel genes, a novel protein similar to chromosome 9 open reading frame 36 (C9orf36), a 6-pyruvoyltetrahydropterin synthase (PTS) pseudogene, the 5' end of a pseudogene similar to part of contactin associated protein-like family, a novel pseudogene and a CpG island, complete sequence Length = 171762 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gaaaaggaaaaagggactga 92 |||||||||||||||||||| Sbjct: 169148 gaaaaggaaaaagggactga 169167
>emb|BX005195.5| Human DNA sequence from clone RP11-203I2 on chromosome 9 Contains the 3' end of a pseudogene similar to part of contactin associated protein-like family and a pseudogene similar to part of a vomeronasal receptor, complete sequence Length = 174843 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gaaaaggaaaaagggactga 92 |||||||||||||||||||| Sbjct: 52753 gaaaaggaaaaagggactga 52772
>emb|AL592525.10| Human DNA sequence from clone RP11-111G23 on chromosome 9 Contains a pseudogene similar to part of contactin associated protein-like 3 (CNTNAP3) and a pseudogene similar to part of vomeronasal 2 family, complete sequence Length = 142805 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gaaaaggaaaaagggactga 92 |||||||||||||||||||| Sbjct: 29278 gaaaaggaaaaagggactga 29297
>emb|AL512643.9| Human DNA sequence from clone RP11-265B7 on chromosome 9 Contains the 5' end of a novel gene (FLJ25416), the 3' end of a novel gene and a novel gene, complete sequence Length = 116806 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 agggaaaggaaaaggaaaaaggga 88 |||||||||||||| ||||||||| Sbjct: 65395 agggaaaggaaaagaaaaaaggga 65372
>emb|AL354802.15| Human DNA sequence from clone RP11-54O10 on chromosome 13 Contains part of the TRPC4 gene transient receptor potential cation channel, subfamily C, member 4, complete sequence Length = 171184 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agggaaaggaaaaggaaaaa 84 |||||||||||||||||||| Sbjct: 8578 agggaaaggaaaaggaaaaa 8597
>emb|AL353729.17| Human DNA sequence from clone RP11-290L7 on chromosome 9 Contains the 3' end of the CNTNAP3 gene for contactin associated protein-like 3, a TGF beta-inducible nuclear protein 1 (TINP1) pseudogene and a RNA binding motif protein 17 (RBM17) pseudogene, complete sequence Length = 195668 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gaaaaggaaaaagggactga 92 |||||||||||||||||||| Sbjct: 88672 gaaaaggaaaaagggactga 88691
>emb|AL158205.12| Human DNA sequence from clone RP11-177F4 on chromosome 9 Contains a CpG island, complete sequence Length = 68171 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ggaaaggaaaaggaaaaagg 86 |||||||||||||||||||| Sbjct: 10854 ggaaaggaaaaggaaaaagg 10873
>emb|AL161722.9| Human DNA sequence from clone RP11-497J7 on chromosome X Contains a melanoma antigen family B 4 pseudogene and a nuclear transcription factor Y, gamma (NFYC) pseudogene, complete sequence Length = 154594 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 61509 aaaggaaaaggaaaaaggga 61528
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 cctccaatttctccaatgag 486 |||||||||||||||||||| Sbjct: 1553608 cctccaatttctccaatgag 1553627
>gb|AC155332.10| Mus musculus 6 BAC RP24-140J8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 202181 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ggaaaggaaaaggaaaaagg 86 |||||||||||||||||||| Sbjct: 101482 ggaaaggaaaaggaaaaagg 101463
>emb|BX294152.1| Pirellula sp. strain 1 complete genome; segment 20/24 Length = 304250 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 671 ttgtggatgtaacctggcatgattccaatctt 702 |||||||||||||| |||||||| || ||||| Sbjct: 4951 ttgtggatgtaaccgggcatgatgccgatctt 4920
>emb|AJ721001.1| Gallus gallus mRNA for hypothetical protein, clone 32c7 Length = 3084 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 ctccaatttctccaatgaga 487 |||||||||||||||||||| Sbjct: 1712 ctccaatttctccaatgaga 1693
>emb|AL645784.20| Mouse DNA sequence from clone RP23-11C7 on chromosome 11 Contains a zinc finger protein pseudogene, a chaperonin subunit 7 (eta) (Cct7) pseudogene, a novel pseudogene and a CpG island, complete sequence Length = 217352 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ggaaaggaaaaggaaaaagg 86 |||||||||||||||||||| Sbjct: 191873 ggaaaggaaaaggaaaaagg 191854
>emb|AL844147.9| Mouse DNA sequence from clone RP23-145N4 on chromosome 11 Contains a novel gene, the 3' end of the Acyp2 gene for muscle type acylphosphatase 2 and a proteasome (prosome, macropain) non-ATPase 26S subunit14 (Psmd14) pseudogene, complete sequence Length = 228444 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 acagggaaaggaaaaggaaaaagg 86 |||||||||| ||||||||||||| Sbjct: 207016 acagggaaagaaaaaggaaaaagg 206993
>emb|AL645747.11| Mouse DNA sequence from clone RP23-436D9 on chromosome 11 Contains a novel gene and a signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 (Stam) pseudogene, complete sequence Length = 172052 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 135124 aaaggaaaaggaaaaaggga 135143
>emb|AL683843.9| Mouse DNA sequence from clone RP23-217E1 on chromosome 11 Contains part of the Ranbp17 gene for RAN binding protein 17, an acidic (leucine-rich) nuclear phosphoprotein 32 family, member E (Anp32e) pseudogene and a high mobility group box 1 (Hmgb1) pseudogene, complete sequence Length = 198926 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 166016 aaaggaaaaggaaaaaggga 166035
>emb|AL671560.7| Mouse DNA sequence from clone RP23-149A5 on chromosome 1 Contains the 3' end of the Nrp2 gene for neuropilin 2, complete sequence Length = 157987 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ggaaaggaaaaggaaaaagg 86 |||||||||||||||||||| Sbjct: 49163 ggaaaggaaaaggaaaaagg 49182
>emb|AL592080.26| Mouse DNA sequence from clone RP23-102H10 on chromosome 11 Contains a endothelial differentiation-related factor 1 (Edf1) pseudogene, the 3' end of the gene for a novel protein similar to human sperm antigen HCMOGT-1 (B230396K10Rik) and a CpG island, complete sequence Length = 216023 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 97214 aaaggaaaaggaaaaaggga 97195
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 gagtagctcagctcagcggccagc 114 ||||||||||| |||||||||||| Sbjct: 5650055 gagtagctcaggtcagcggccagc 5650032
>gb|AC156617.8| Mus musculus chromosome 7, clone RP23-311N3, complete sequence Length = 203647 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gggaaaggaaaaggaaaaag 85 |||||||||||||||||||| Sbjct: 175466 gggaaaggaaaaggaaaaag 175485
>emb|AL671983.18| Mouse DNA sequence from clone RP23-232B3 on chromosome X, complete sequence Length = 176577 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 aagacagggaaaggaaaaggaaaa 83 |||| ||||||||||||||||||| Sbjct: 117437 aagaaagggaaaggaaaaggaaaa 117460
>gb|AC010030.10| Drosophila melanogaster 3L BAC RP98-2C14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 200859 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 tgggggcactaccgacgtattgct 140 ||||||||||||| |||||||||| Sbjct: 81148 tgggggcactaccaacgtattgct 81171
>gb|AC091133.11| Homo sapiens chromosome 17, clone RP11-501C14, complete sequence Length = 168613 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gaaaggaaaaggaaaaaggg 87 |||||||||||||||||||| Sbjct: 94485 gaaaggaaaaggaaaaaggg 94466
>gb|AC108877.2| Drosophila melanogaster 3L BAC RP98-17L24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163709 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cgctattaaccaacgagcaa 160 |||||||||||||||||||| Sbjct: 12851 cgctattaaccaacgagcaa 12870
>ref|NM_019973.1| Mus musculus Son cell proliferation protein (Son), transcript variant 2, mRNA Length = 6549 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cagggaaaggaaaaggaaaa 83 |||||||||||||||||||| Sbjct: 5686 cagggaaaggaaaaggaaaa 5705
>gb|AC023751.3| Drosophila melanogaster 3L BAC RP98-31C17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187437 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cgctattaaccaacgagcaa 160 |||||||||||||||||||| Sbjct: 96670 cgctattaaccaacgagcaa 96689
>ref|NM_178880.3| Mus musculus Son cell proliferation protein (Son), transcript variant 1, mRNA Length = 8272 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cagggaaaggaaaaggaaaa 83 |||||||||||||||||||| Sbjct: 5686 cagggaaaggaaaaggaaaa 5705
>gb|AC092713.2| Homo sapiens chromosome 17, clone CTC-780D20, complete sequence Length = 142087 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 catttcttctctctactcta 218 |||||||||||||||||||| Sbjct: 71022 catttcttctctctactcta 71041
>ref|NM_168102.1| Drosophila melanogaster Guanine nucleotide exchange factor GEF64C CG32239-RA (Gef64C), mRNA Length = 7283 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cgctattaaccaacgagcaa 160 |||||||||||||||||||| Sbjct: 7073 cgctattaaccaacgagcaa 7092
>gb|AY064174.1| Drosophila melanogaster rho GTPase guanine nucleotide exchange factor GEF64C (Gef64c) mRNA, complete cds Length = 7304 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cgctattaaccaacgagcaa 160 |||||||||||||||||||| Sbjct: 7081 cgctattaaccaacgagcaa 7100
>gb|AC098565.3| Oryza sativa chromosome 10 clone OSJNBa0028C16, complete sequence Length = 166757 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 160397 aaaggaaaaggaaaaaggga 160416
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tggcccatgcgacggcccgg 378 |||||||||||||||||||| Sbjct: 783322 tggcccatgcgacggcccgg 783303
>gb|AY060795.1| Drosophila melanogaster GH26207 full length cDNA Length = 2479 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cgctattaaccaacgagcaa 160 |||||||||||||||||||| Sbjct: 2252 cgctattaaccaacgagcaa 2271
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tctactgtaccatttcttct 208 |||||||||||||||||||| Sbjct: 7823 tctactgtaccatttcttct 7804
>gb|AC109319.17| Homo sapiens chromosome 17, clone RP11-899O23, complete sequence Length = 99701 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 aagacagggaaaggaaaaggaaaa 83 |||| ||||||||||||||||||| Sbjct: 61263 aagagagggaaaggaaaaggaaaa 61286
>dbj|AK040621.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430110D10 product:Son cell proliferation protein, full insert sequence Length = 2279 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cagggaaaggaaaaggaaaa 83 |||||||||||||||||||| Sbjct: 865 cagggaaaggaaaaggaaaa 884
>gb|AC154736.2| Mus musculus BAC clone RP24-389J14 from chromosome 16, complete sequence Length = 141092 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 agggaaaggaaaaggaaaaaggga 88 ||||||||||||||||||| |||| Sbjct: 82866 agggaaaggaaaaggaaaagggga 82889
>dbj|AK083763.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130005F08 product:unclassifiable, full insert sequence Length = 3211 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 actgtaccatttcttctctc 211 |||||||||||||||||||| Sbjct: 1108 actgtaccatttcttctctc 1127
>ref|NM_064887.2| Caenorhabditis elegans F23H11.3 (F23H11.3) mRNA, complete cds Length = 1118 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 683 cctggcatgattccaatctt 702 |||||||||||||||||||| Sbjct: 515 cctggcatgattccaatctt 496
>gb|AC026955.10|AC026955 Homo sapiens chromosome 17, clone RP11-585D22, complete sequence Length = 176258 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 catttcttctctctactcta 218 |||||||||||||||||||| Sbjct: 161687 catttcttctctctactcta 161706
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tctactgtaccatttcttct 208 |||||||||||||||||||| Sbjct: 2662381 tctactgtaccatttcttct 2662400
>gb|AF233882.1|AF233882S1 Homo sapiens plakoglobin (JUP) gene, exons 1 through 7 Length = 10568 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 aagacagggaaaggaaaaggaaaa 83 |||| ||||||||||||||||||| Sbjct: 6499 aagagagggaaaggaaaaggaaaa 6476
>gb|AF193597.1|F193595S03 Mus musculus SON protein (Son) gene, exon 3 Length = 5880 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cagggaaaggaaaaggaaaa 83 |||||||||||||||||||| Sbjct: 5429 cagggaaaggaaaaggaaaa 5448
>ref|XM_221656.3| PREDICTED: Rattus norvegicus Son cell proliferation protein (predicted) (Son_predicted), mRNA Length = 8372 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cagggaaaggaaaaggaaaa 83 |||||||||||||||||||| Sbjct: 5719 cagggaaaggaaaaggaaaa 5738
>gb|AC027243.20| Homo sapiens chromosome 15, clone RP11-685G9, complete sequence Length = 195806 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 tacctccaatttctccaatgagaa 488 ||||||||||||| |||||||||| Sbjct: 189066 tacctccaatttccccaatgagaa 189089
>gb|AC097587.3| Sus scrofa clone RP44-50K20, complete sequence Length = 111967 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gggaaaggaaaaggaaaaag 85 |||||||||||||||||||| Sbjct: 103719 gggaaaggaaaaggaaaaag 103700
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tctactgtaccatttcttct 208 |||||||||||||||||||| Sbjct: 7190 tctactgtaccatttcttct 7209
>gb|AC116365.2| Homo sapiens chromosome 5 clone RP11-797O11, complete sequence Length = 117723 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 19488 aaaggaaaaggaaaaaggga 19507
>gb|AC091100.14| Homo sapiens chromosome 15, clone RP11-593F23, complete sequence Length = 180227 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 tacctccaatttctccaatgagaa 488 ||||||||||||| |||||||||| Sbjct: 37348 tacctccaatttccccaatgagaa 37371
>gb|AC146977.22| Mus musculus chromosome 13, clone RP23-106I12, complete sequence Length = 200131 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ggaaaggaaaaggaaaaagg 86 |||||||||||||||||||| Sbjct: 135077 ggaaaggaaaaggaaaaagg 135058
>gb|AF193607.1|AF193607 Mus musculus truncated SON protein (Son) mRNA, complete cds Length = 6549 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cagggaaaggaaaaggaaaa 83 |||||||||||||||||||| Sbjct: 5686 cagggaaaggaaaaggaaaa 5705
>dbj|AK070974.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023070F02, full insert sequence Length = 2386 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tctactgtaccatttcttct 208 |||||||||||||||||||| Sbjct: 611 tctactgtaccatttcttct 592
>gb|AC124191.4| Mus musculus BAC clone RP23-275E4 from 18, complete sequence Length = 203003 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 95055 aaaggaaaaggaaaaaggga 95074
>dbj|AK063281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-C12, full insert sequence Length = 2266 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tctactgtaccatttcttct 208 |||||||||||||||||||| Sbjct: 66 tctactgtaccatttcttct 47
>gb|AC113278.15| Mus musculus chromosome 3, clone RP23-387I7, complete sequence Length = 180681 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 53425 aaaggaaaaggaaaaaggga 53444
>gb|AE003546.4| Drosophila melanogaster chromosome 3L, section 39 of 83 of the complete sequence Length = 281589 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 tgggggcactaccgacgtattgct 140 ||||||||||||| |||||||||| Sbjct: 9762 tgggggcactaccaacgtattgct 9785
>gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16 of 83 of the complete sequence Length = 302417 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cgctattaaccaacgagcaa 160 |||||||||||||||||||| Sbjct: 169680 cgctattaaccaacgagcaa 169699
>gb|AC116783.7| Mus musculus chromosome 5, clone RP24-145D9, complete sequence Length = 168285 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agggaaaggaaaaggaaaaa 84 |||||||||||||||||||| Sbjct: 161304 agggaaaggaaaaggaaaaa 161323
>dbj|AK122418.1| Mus musculus mRNA for mKIAA1019 protein Length = 5567 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cagggaaaggaaaaggaaaa 83 |||||||||||||||||||| Sbjct: 202 cagggaaaggaaaaggaaaa 221
>gb|AC116556.14| Mus musculus strain C57BL/6J chromosome 8 clone rp23-184i13, complete sequence Length = 239958 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 cttttctgttttgctctccc 434 |||||||||||||||||||| Sbjct: 220381 cttttctgttttgctctccc 220400
>gb|AC122343.4| Mus musculus BAC clone RP23-359L18 from chromosome 7, complete sequence Length = 228892 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 actgtaccatttcttctctc 211 |||||||||||||||||||| Sbjct: 140489 actgtaccatttcttctctc 140508
>gb|AC172624.2| Rhesus Macaque BAC CH250-494G19 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 155349 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 taaaggctgcagcatcctcc 457 |||||||||||||||||||| Sbjct: 130266 taaaggctgcagcatcctcc 130247
>gb|AC149346.2| Phakopsora pachyrhizi clone JGIAFNA-33E14, complete sequence Length = 38941 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 cttttctactgtaccatttcttct 208 |||| ||||||||||||||||||| Sbjct: 8157 ctttcctactgtaccatttcttct 8180
>gb|AC147644.3| Gallus gallus BAC clone CH261-77K20 from chromosome unknown, complete sequence Length = 191888 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ggaaaggaaaaggaaaaagg 86 |||||||||||||||||||| Sbjct: 177038 ggaaaggaaaaggaaaaagg 177057
>gb|AC142274.3| Mus musculus BAC clone RP23-251M14 from 6, complete sequence Length = 179732 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 62931 aaaggaaaaggaaaaaggga 62950
>emb|AL773522.15| Mouse DNA sequence from clone RP23-148P20 on chromosome 4, complete sequence Length = 185592 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ggaaaggaaaaggaaaaagg 86 |||||||||||||||||||| Sbjct: 66030 ggaaaggaaaaggaaaaagg 66049
>emb|AL731829.10| Mouse DNA sequence from clone RP23-383P24 on chromosome 4 Contains part of the Astn2 gene for astrotactin 2 and a CpG island, complete sequence Length = 199452 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 tttcttctctctactctacc 220 |||||||||||||||||||| Sbjct: 191726 tttcttctctctactctacc 191707
>emb|CT030657.5| Mouse DNA sequence from clone RP23-142A12 on chromosome 13, complete sequence Length = 201402 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ggaaaggaaaaggaaaaagg 86 |||||||||||||||||||| Sbjct: 194661 ggaaaggaaaaggaaaaagg 194680
>gb|AC000126.1|HSAC000126 Human Cosmid g1572c190, complete sequence Length = 42440 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 taaaggctgcagcatcctcc 457 |||||||||||||||||||| Sbjct: 34394 taaaggctgcagcatcctcc 34375
>gb|AC158981.2| Mus musculus BAC clone RP23-230C10 from chromosome 14, complete sequence Length = 213277 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 agggaaaggaaaaggaaaaaggga 88 |||||||||||| ||||||||||| Sbjct: 198951 agggaaaggaaagggaaaaaggga 198928 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 agggaaaggaaaaggaaaaaggga 88 |||||||||||| ||||||||||| Sbjct: 198797 agggaaaggaaagggaaaaaggga 198774
>emb|AL611970.11| Mouse DNA sequence from clone RP23-413K17 on chromosome 4, complete sequence Length = 61588 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 cccagcctccctgagtgcct 308 |||||||||||||||||||| Sbjct: 53835 cccagcctccctgagtgcct 53854
>emb|AL353996.3|HS48J14 Homo sapiens chromosome 17 sequence from PAC RPCI-1 48J14 region D17S842-D17S953 map 17p11.2, complete sequence Length = 105982 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ggaaaggaaaaggaaaaagg 86 |||||||||||||||||||| Sbjct: 34636 ggaaaggaaaaggaaaaagg 34655
>gb|AC166834.2| Mus musculus BAC clone RP23-158D24 from chromosome 7, complete sequence Length = 212016 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 actgtaccatttcttctctc 211 |||||||||||||||||||| Sbjct: 170748 actgtaccatttcttctctc 170729
>gb|AC156543.10| Mus musculus chromosome 15, clone RP23-220F2, complete sequence Length = 199715 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aaaggaaaaggaaaaaggga 88 |||||||||||||||||||| Sbjct: 108741 aaaggaaaaggaaaaaggga 108760 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,452,453 Number of Sequences: 3902068 Number of extensions: 7452453 Number of successful extensions: 160566 Number of sequences better than 10.0: 207 Number of HSP's better than 10.0 without gapping: 209 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 158964 Number of HSP's gapped (non-prelim): 1572 length of query: 704 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 681 effective length of database: 17,143,297,704 effective search space: 11674585736424 effective search space used: 11674585736424 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
