>DNJ10_ARATH (Q8GYX8) Chaperone protein dnaJ 10 (AtJ10) (AtDjC10)|
          Length = 398

 Score = 85.5 bits (210), Expect(2) = 6e-21
 Identities = 58/152 (38%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
 Frame = -3

Query: 631 KASRELGKE*IVYGCTIHS*VGKRQGVTPIKSQVHAASGAIALMQLQDGMKKV--EEGAN 458
           +A++ELGK+ I  G    +   + +G   IKSQ+ AA+GA AL QLQ+ MK+    EG  
Sbjct: 189 QAAKELGKKAIYLGVPFIAEWFRNKGHF-IKSQLTAATGAYALFQLQEEMKRQLNTEGNY 247

Query: 457 KEEQLMKSFEEKKEAMLNSLWKINVVDIESTLSRVCQAVLKDSTVSKDVXXXXXXXXXXX 278
            EE+L +  +  K  M++SLWK+NV DIE+TL RVCQ VL+D    ++            
Sbjct: 248 TEEELEEYLQAHKRVMIDSLWKLNVADIEATLCRVCQLVLQDPEAKREELRTRARGLKAL 307

Query: 277 GTIFQGAKSLYHRENSLRVESPMEGEGTTSSH 182
           G IFQ AK+     + L    P +  G   +H
Sbjct: 308 GRIFQRAKTA-SESDPLENSEPQKLNGNGKNH 338



 Score = 37.7 bits (86), Expect = 0.033
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = -1

Query: 645 YLCTAKRQENLEKSKLYMGVPFIAEWVRDKG 553
           Y+   +  + L K  +Y+GVPFIAEW R+KG
Sbjct: 184 YIYVRQAAKELGKKAIYLGVPFIAEWFRNKG 214



 Score = 35.0 bits (79), Expect(2) = 6e-21
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = -2

Query: 683 AAFGEAMLHTVGYIYVRQSVKRTWKR 606
           AA+G  ML+T+GYIYVRQ+ K   K+
Sbjct: 172 AAYGVDMLNTIGYIYVRQAAKELGKK 197

>YIS4_YEAST (P40564) Hypothetical 48.6 kDa protein in BET1-PAN1 intergenic|
           region
          Length = 432

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
 Frame = -3

Query: 493 QDGMKKV----EEGANKEEQLMKSFEEKKEAMLNSLWKINVVDIESTLSRVCQAVLKDST 326
           +DG +++    EE A +E+ LM         +L++ W  +  +I STL  VC+ VL+D +
Sbjct: 330 KDGNEQIKPTTEELAQQEQLLMGK-------VLSAAWHGSKYEITSTLRGVCKKVLEDDS 382

Query: 325 VSK 317
           VSK
Sbjct: 383 VSK 385

>ENV_HV1S1 (P19550) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 847

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = -3

Query: 571 VGKRQGVTPIKSQVHAASGAIALMQLQDGMKKVEEGANKEEQLMKSFEEKKEAMLNSLWK 392
           VGK     PI+ Q+  +S    L+  +DG K++   +N  E       + ++   + L+K
Sbjct: 420 VGKAMYAPPIRGQIRCSSNITGLLLTRDGGKEI---SNTTEIFRPGGGDMRDNWRSELYK 476

Query: 391 INVVDIE 371
             VV IE
Sbjct: 477 YKVVKIE 483

>SH3G2_MOUSE (Q62420) SH3-containing GRB2-like protein 2 (EC 2.3.1.-) (SH3|
           domain protein 2A) (Endophilin 1) (SH3p4)
          Length = 352

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
 Frame = -3

Query: 499 QLQDGMKKVEEGANKEEQL---MKSFEEKKEAMLNSLWKINVVDIE--STLSRVCQAVLK 335
           +L  G KK  +G   +E+L   ++ F+E KE   +S++ +  +DIE  S LS + QA L+
Sbjct: 165 RLDFGYKKKRQGKIPDEELRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLE 224

>ZN678_HUMAN (Q5SXM1) Zinc finger protein 678|
          Length = 525

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
 Frame = +2

Query: 68  GKHTYRCVESKPAVPQYYKQTI---IHRDPNNSQIVKCQSSVRRCRSLPFHRRFH 223
           G+  Y+C E   A  Q+   T    IH      Q  +C  +  RC  L  H+R H
Sbjct: 289 GEKPYKCEECGKAFTQFASLTRHKRIHTGEKPYQCEECGKTFNRCSHLSSHKRIH 343

>ENV_HV1SC (P05878) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 856

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = -3

Query: 571 VGKRQGVTPIKSQVHAASGAIALMQLQDGMKKVEEGANKEEQLMK-SFEEKKEAMLNSLW 395
           VGK     PIK QV  +S    L+  +DG        N+  ++ +    + ++   + L+
Sbjct: 424 VGKAMYAPPIKGQVKCSSNITGLLLTRDGGNSKNGSKNENTEIFRPGGGDMRDNWRSELY 483

Query: 394 KINVVDIE 371
           K  VV IE
Sbjct: 484 KYKVVKIE 491

>ENV_HV1MF (P19551) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 853

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = -3

Query: 571 VGKRQGVTPIKSQVHAASGAIALMQLQDGMKKVEEGANKEEQLMKSFEEKKEAMLNSLWK 392
           VGK     PI  Q+  +S    L+  +DG K      N+ E       + ++   + L+K
Sbjct: 428 VGKAMYAPPISGQIRCSSNITGLLLTRDGGK----NTNESEVFRPGGGDMRDNWRSELYK 483

Query: 391 INVVDIES 368
             VV IE+
Sbjct: 484 YKVVKIET 491

>HRPA_PSESY (Q52420) Hrp pili protein hrpA (TTSS pilin hrpA)|
          Length = 108

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 490 DGMKKVEEGANKEEQLMKSFEEKKEAMLNSL 398
           DG    E G  +E  ++  FE+KKEA+ N +
Sbjct: 66  DGTANEENGLLRESSMLAGFEDKKEALSNQI 96

>ZN492_HUMAN (Q9P255) Zinc finger protein 492 (Fragment)|
          Length = 574

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
 Frame = +2

Query: 26  RCFVFSTTLFYRK---HGKHTYRCVESKPAVPQYYKQTI---IHRDPNNSQIVKCQSSVR 187
           + F  S+TL   K    G+  Y+C E   A  Q    T    IH      +  +C  + +
Sbjct: 331 KAFSQSSTLTTHKIIHTGEKFYKCEECGKAFSQLSHLTTHKRIHSGEKPYKCEECGKAFK 390

Query: 188 RCRSLPFHRRFHA*AVLAMVERFCALEYRSKFFQCFS 298
           +  +L  H+R HA       E+F   E  SK F  FS
Sbjct: 391 QSSTLTTHKRIHA------GEKFYKCEVCSKAFSRFS 421

>ZN578_HUMAN (Q96N58) Zinc finger protein 578|
          Length = 365

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
 Frame = +2

Query: 26  RCFVFSTTL--FYRKH-GKHTYRCVESKPAVPQ---YYKQTIIHRDPNNSQIVKCQSSVR 187
           + F+  ++L   +R H G+ +Y+C E      Q     +  IIH      +  +C  +  
Sbjct: 209 KAFIHQSSLARHHRLHTGEKSYKCEECDRVFSQKSNLERHKIIHTGEKPYKCNECHKTFS 268

Query: 188 RCRSLPFHRRFHA 226
              SLP HRR H+
Sbjct: 269 HRSSLPCHRRLHS 281

>TBK1_XENLA (Q6DFJ6) Serine/threonine-protein kinase TBK1 (EC 2.7.11.1)|
          Length = 725

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
 Frame = -1

Query: 666 YASHCWIYLCTAKRQENLE------KSKLYMGVPFIAEWVRDKGSHPLNRKFMLLQVLL- 508
           YA H  + L  +  QE L+      K+KL  G   +  W+  +G H  +R    LQVLL 
Sbjct: 495 YAIHAKL-LNLSSTQEGLKSSLQEVKNKLTPGGTLMDSWINTEGIHAADRNVEKLQVLLS 553

Query: 507 ----L*CSYKME*KRWRRVPIRKNSL*RVLRRKRKPCL 406
               + C +K + K  RR+   +  + +    K+K CL
Sbjct: 554 LITEIYCQFKKD-KAQRRLSYNEEQIHKF--DKQKLCL 588

>ENV_HV1MN (P05877) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 856

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = -3

Query: 571 VGKRQGVTPIKSQVHAASGAIALMQLQDGMKKVEEGANKEEQLMKSFEEKKEAMLNSLWK 392
           VGK     PI+ Q+  +S    L+  +DG K  +   N  E       + ++   + L+K
Sbjct: 430 VGKAMYAPPIEGQIRCSSNITGLLLTRDGGKDTD--TNDTEIFRPGGGDMRDNWRSELYK 487

Query: 391 INVVDIE 371
             VV IE
Sbjct: 488 YKVVTIE 494

>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1)
          Length = 1166

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +2

Query: 29  CFVFSTTLFYRKHGKHTYRCVESKPAVPQYYKQTIIHRDPNN 154
           CF F+T+L    HGKH      ++ A+   +KQ  +  DPNN
Sbjct: 12  CF-FTTSLVMGIHGKHLINDDFNETALLLAFKQNSVKSDPNN 52


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,451,992
Number of Sequences: 219361
Number of extensions: 1981653
Number of successful extensions: 5939
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5936
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)