Clone Information

BLAST Search Result

Clone Name	rbags32a17
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TRDN_HUMAN (Q13061) Triadin	36	0.088
2	NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa neur...	36	0.12
3	YK02_SCHPO (Q9HDY9) Hypothetical serine/threonine-rich protein P...	35	0.20
4	NFH_RAT (P16884) Neurofilament triplet H protein (200 kDa neurof...	34	0.34
5	TRDN_RABIT (Q28820) Triadin	33	0.57
6	PATL2_ARATH (Q56ZI2) Patellin-2	33	0.75
7	UBP8_HUMAN (P40818) Ubiquitin carboxyl-terminal hydrolase 8 (EC ...	33	0.75
8	ZC3H6_MOUSE (Q8BYK8) Zinc finger CCCH-type domain-containing pro...	33	0.98
9	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	33	0.98
10	T2FA_DROME (Q05913) Transcription initiation factor IIF alpha su...	32	1.3
11	TOP2A_CHICK (O42130) DNA topoisomerase 2-alpha (EC 5.99.1.3) (DN...	32	1.3
12	YNP2_YEAST (P53901) Hypothetical 46.2 kDa protein in YCK2-RPC8 i...	32	1.7
13	UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Unco...	32	1.7
14	ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing pro...	32	1.7
15	AMDR_ASPOR (Q06157) Acetamidase regulatory protein	32	1.7
16	NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 ...	32	1.7
17	MUCAP_PIG (P12021) Apomucin (Mucin core protein) (Fragment)	32	2.2
18	SYF2_KLULA (Q6CPI4) Pre-mRNA-splicing factor SYF2	31	2.8
19	HSLU_VIBCH (Q9KNQ7) ATP-dependent hsl protease ATP-binding subun...	31	3.7
20	FKBP4_CRYNE (Q5KIJ5) FK506-binding protein 4 (EC 5.2.1.8) (Pepti...	31	3.7
21	H1_NEUCR (Q8J0U2) Histone H1	31	3.7
22	IF2P_HUMAN (O60841) Eukaryotic translation initiation factor 5B ...	30	4.9
23	HD2A_SOLCH (Q6V9I6) Histone deacetylase 2a (HD2a) (ScHD2a)	30	4.9
24	IGA1_STRSA (Q59986) Immunoglobulin A1 protease precursor (EC 3.4...	30	4.9
25	SEC62_CHICK (Q5F3A1) Translocation protein SEC62 (Translocation ...	30	6.3
26	AP3B2_MOUSE (Q9JME5) AP-3 complex subunit beta-2 (Adapter-relate...	30	6.3
27	AP3B2_HUMAN (Q13367) AP-3 complex subunit beta-2 (Adapter-relate...	30	6.3
28	ADA33_MOUSE (Q923W9) ADAM 33 precursor (EC 3.4.24.-) (A disinteg...	30	6.3
29	MAK5_EMENI (Q5BCI0) ATP-dependent RNA helicase mak5 (EC 3.6.1.-)	30	6.3
30	I15RA_MOUSE (Q60819) Interleukin-15 receptor alpha chain precurs...	30	6.3
31	RBP2_BOVIN (P48820) Ran-binding protein 2 (RanBP2) (Nuclear pore...	30	6.3
32	FABH_STRP6 (Q5XAE0) 3-oxoacyl-[acyl-carrier-protein] synthase 3 ...	30	6.3
33	VAT1_BRARE (Q8JFV8) Synaptic vesicle membrane protein VAT-1 homo...	30	6.3
34	SLA1_YEAST (P32790) Cytoskeleton assembly control protein SLA1	30	6.3
35	NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 pr...	30	8.3
36	NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa neur...	30	8.3
37	FABH_STRP8 (P64115) 3-oxoacyl-[acyl-carrier-protein] synthase 3 ...	30	8.3
38	FABH_STRP3 (P64114) 3-oxoacyl-[acyl-carrier-protein] synthase 3 ...	30	8.3
39	FABH_STRP1 (Q99YD2) 3-oxoacyl-[acyl-carrier-protein] synthase 3 ...	30	8.3
40	ASA1_ENTFA (P17953) Aggregation substance precursor	30	8.3
41	YN86_YEAST (P27514) Hypothetical 99.5 kDa protein in URK1-SMM1 i...	30	8.3
42	SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dep...	30	8.3
43	RP3A_HUMAN (Q9Y2J0) Rabphilin-3A (Exophilin-1)	30	8.3
44	NPAS3_MOUSE (Q9QZQ0) Neuronal PAS domain protein 3 (Neuronal PAS...	30	8.3
45	NOTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1 pr...	30	8.3
46	XPO5_MOUSE (Q924C1) Exportin-5 (Ran-binding protein 21)	30	8.3
47	XPO5_HUMAN (Q9HAV4) Exportin-5 (Exp5) (Ran-binding protein 21)	30	8.3

>TRDN_HUMAN (Q13061) Triadin|
          Length = 728

 Score = 36.2 bits (82), Expect = 0.088
 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 22/107 (20%)
 Frame = -3

Query: 555 VEQKEGNMKKA------------KDEVKAPRKKITAVKDEAKAPRK---------KITAD 439
           +E+KEG  KKA            K+++K   +K TA+  E K P K         KI A 
Sbjct: 308 LEEKEGEKKKAEKKVTSETKKKEKEDIKKKSEKETAIDVEKKEPGKASETKQGTVKIAAQ 367

Query: 438 VVCKDDGRSESGVTFDSLECHQDVGCVTPSKPEPKKKRKWVE-ARSP 301
              K D + E     DS +  +      P   + +KK K VE A+SP
Sbjct: 368 AAAKKDEKKE-----DSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSP 409

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>NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa neurofilament|
            protein) (Neurofilament heavy polypeptide) (NF-H)
          Length = 1026

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
 Frame = -3

Query: 522  KDEVKAPRKKITAVKDEAKAPRKKI-----TADVVCKDDGRSESGVTFDSLECHQDVGCV 358
            K+EVK+P K  + +K++AKAP K+I         V +++   E  V     +  ++    
Sbjct: 796  KEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPA 855

Query: 357  TPSKPEPKKKRKWVEARSPDCVASRLRSRSAP 262
            TP K E KK  K  EA   +    ++  +  P
Sbjct: 856  TP-KTEEKKDSKKEEAPKKEAPKPKVEEKKEP 886



 Score = 34.7 bits (78), Expect = 0.26
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
 Frame = -3

Query: 558 EVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAPRK-KITADVVCKDDGRSESGVTFDSLE 382
           E +  E      K+E K+P K  + VK+EAK+P K K       K   +++S V  ++  
Sbjct: 693 EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEA-- 750

Query: 381 CHQDVGCVTPSKPEPKKKRKWVEARSPD 298
                   +P K +  +K K ++ +SP+
Sbjct: 751 -------KSPEKAKSPEKAKTLDVKSPE 771



 Score = 33.5 bits (75), Expect = 0.57
 Identities = 31/125 (24%), Positives = 57/125 (45%)
 Frame = -3

Query: 642 PCADEVSEHTPIAKQDADLSSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAKA 463
           P A+E +     AK      + +  +A   E++E    K+  EVK+P K  +  K+EAK+
Sbjct: 504 PPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEA---KSPAEVKSPEKAKSPAKEEAKS 560

Query: 462 PRKKITADVVCKDDGRSESGVTFDSLECHQDVGCVTPSKPEPKKKRKWVEARSPDCVASR 283
           P +  + +   K++ +S +       E        +P+K E K      EA+SP+   S 
Sbjct: 561 PPEAKSPE---KEEAKSPA-------EVKSPEKAKSPAKEEAKSP---AEAKSPEKAKSP 607

Query: 282 LRSRS 268
           ++  +
Sbjct: 608 VKEEA 612



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
 Frame = -3

Query: 615 TPIAKQDADLSSNTMNDAGEVEQKEGNMKKAK----DEVKAPRKKITAVKDEAKAPRK-K 451
           +P   +  + + +   +  +  +K  + +KAK    +E K+P K  + VK EAK+P K K
Sbjct: 628 SPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAK 687

Query: 450 ITADVVCKDDGRSESGVTFDSLECHQDVGCVTPSKPEPKKKRKWV--EARSPDCVASRLR 277
                  K   +++S V  ++    +    V      P+K +  V  EA++P+   S ++
Sbjct: 688 SPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVK 747

Query: 276 SRS 268
             +
Sbjct: 748 EEA 750



 Score = 31.6 bits (70), Expect = 2.2
 Identities = 21/75 (28%), Positives = 33/75 (44%)
 Frame = -3

Query: 552  EQKEGNMKKAKDEVKAPRKKITAVKDEAKAPRKKITADVVCKDDGRSESGVTFDSLECHQ 373
            E+KE  ++K K+     +K+    K +   P K+  A V  K+D + +        E   
Sbjct: 882  EKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKE-PD 940

Query: 372  DVGCVTPSKPEPKKK 328
            D     PSKP  KK+
Sbjct: 941  DAKAKEPSKPAEKKE 955



 Score = 31.6 bits (70), Expect = 2.2
 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = -3

Query: 558 EVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAPRK-KITADVVCKDDGRSESGVTFDSLE 382
           E +  E      K E K+P K  + VK EAK+P K K       K   +++S V  ++  
Sbjct: 665 EAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKS 724

Query: 381 CHQDVGCVTPSKPEPKKKRKWV--EARSPDCVASRLRSRS 268
             +    V      P+K +  V  EA+SP+   S  ++++
Sbjct: 725 PEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKT 764



 Score = 31.6 bits (70), Expect = 2.2
 Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
 Frame = -3

Query: 606 AKQDADLSSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAP---RKKITADV 436
           AK  A   + +  +A   E++E    K+  EVK+P K  +  K+EAK+P   +    A  
Sbjct: 550 AKSPAKEEAKSPPEAKSPEKEEA---KSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKS 606

Query: 435 VCKDDGRSESGVTFDSLECHQDVGCVTPSKPEPKKKRKWVEARSPDCVASRLRSRSAPK 259
             K++ +S +       E  +    V    PE  K     EA+SP+   S  +++S  K
Sbjct: 607 PVKEEAKSPAEAKSPVKEEAKSPAEV--KSPEKAKSPTKEEAKSPEKAKSPEKAKSPEK 663



 Score = 30.4 bits (67), Expect = 4.9
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
 Frame = -3

Query: 636 ADEVSEHTPIAKQDADLSSNTMNDAGEVEQKEGNMK---KAKDEVKAPRKKITAVKDEAK 466
           A E ++    AK      S    +A    + +  +K   K+  EVK+P K  +  K+EAK
Sbjct: 588 AKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAK 647

Query: 465 APRK-------KITADVVCKDDGRSESGVTFDSLECHQDVGCVTPSKPEPKKKRKWV--E 313
           +P K       K       K   +++S V  ++    +    V      P+K +  V  E
Sbjct: 648 SPEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEE 707

Query: 312 ARSPDCVASRLRSRS 268
           A+SP+   S ++  +
Sbjct: 708 AKSPEKAKSPVKEEA 722

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>YK02_SCHPO (Q9HDY9) Hypothetical serine/threonine-rich protein P11E10.02c|
           precursor
          Length = 1082

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 5/190 (2%)
 Frame = +2

Query: 95  PATSITASLNYLQQTKRQPTNPKHTTNQNHASDKITTCAKGVVGPHKSQDQVAHDLGADR 274
           P++SI +S+ Y       PT+ ++ T+    S+  +T +  VV P  +   V       +
Sbjct: 456 PSSSIKSSIVY----SVTPTSAENYTS----SEAFSTSSSLVVIPPVNSSLVTSSTSFTK 507

Query: 275 ERSLLATQSGLLASTHFLFFFGSGLDGVTQPTSW*HSRESNVTPDSLLPSS-----LQTT 439
             SL ++Q   L++ +F           +   S  +++ S  TP + +P+S     LQT+
Sbjct: 508 FSSLSSSQ---LSTENFT--------SASSSLSLTNAKSSLSTPSTTIPTSNSSVSLQTS 556

Query: 440 SAVIFFLGALASSLTAVIFFLGALTSSLAFFMFPSFCSTSPASFIVLLLRSASCLAIGVC 619
           S++I     ++SSLTA      ALT S+     PS  S + +S I       S   I VC
Sbjct: 557 SSLIISSPIISSSLTATSTSTPALTHSIT----PSNTSYT-SSLIPSSSTDYSSSLITVC 611

Query: 620 SETSSAHGSS 649
           S  +S   S+
Sbjct: 612 SNVTSEISST 621

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>NFH_RAT (P16884) Neurofilament triplet H protein (200 kDa neurofilament|
            protein) (Neurofilament heavy polypeptide) (NF-H)
          Length = 1072

 Score = 34.3 bits (77), Expect = 0.34
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
 Frame = -3

Query: 606  AKQDADLSSNTMNDAGEVEQKEGNMK---KAKDEVKAPRKKITAVKDEAKAPRKKITADV 436
            AK      + ++ +A   E+ +  +K   K   EVK+P K  + +K+EAK+P K  T DV
Sbjct: 766  AKSPVKEGAKSLAEAKSPEKAKSPVKEEIKPPAEVKSPEKAKSPMKEEAKSPEKAKTLDV 825

Query: 435  VCKDDGRSESGVTFDSLECHQDVGCVTPSKPEPKKKRKWVEARSPDCVASRLRSRSAPK 259
                  +S    T    E  +     +P + +   K    EA+SP+   +R   + APK
Sbjct: 826  ------KSPEAKTPAKEEAKRPADIRSPEQVKSPAKE---EAKSPEKEETR-TEKVAPK 874

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>TRDN_RABIT (Q28820) Triadin|
          Length = 705

 Score = 33.5 bits (75), Expect = 0.57
 Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 11/108 (10%)
 Frame = -3

Query: 552 EQKEGNMKKAKDEVKAPRKKITAVKDEAKAPRKKITADVVCKDDGRS-----------ES 406
           E+KEG  KKA+ +V    KK    +D  K   K+   D+  K+ G+S             
Sbjct: 309 EEKEGEKKKAEKKVTTETKKKAEKEDAKKKSEKETDIDMKKKEPGKSPDTKPGTVKVTTQ 368

Query: 405 GVTFDSLECHQDVGCVTPSKPEPKKKRKWVEARSPDCVASRLRSRSAP 262
             T    +         P++ +PK K++  + +  +   S  +  +AP
Sbjct: 369 AATKKDEKKEDSKKAKKPAEEQPKGKKQEKKEKHEEPAKSTKKEHAAP 416

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>PATL2_ARATH (Q56ZI2) Patellin-2|
          Length = 683

 Score = 33.1 bits (74), Expect = 0.75
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = -3

Query: 627 VSEHTPIAKQDADLSSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAPRKKI 448
           V E TP   ++ ++   T   A      E   +K   EV  P  ++TAVK+E  A  K+I
Sbjct: 16  VKEETPAPVKEVEVPVTT-EKAVAAPAPEATEEKVVSEVAVPETEVTAVKEEEVATGKEI 74

Query: 447 TADVVCKDDG 418
                 K++G
Sbjct: 75  LQSESFKEEG 84

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>UBP8_HUMAN (P40818) Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 8) (Ubiquitin-specific
           processing protease 8) (Deubiquitinating enzyme 8)
           (hUBPy)
          Length = 1118

 Score = 33.1 bits (74), Expect = 0.75
 Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 7/119 (5%)
 Frame = -3

Query: 603 KQDADLSSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAPRKKITADVVCKD 424
           KQ+ +L      +  E  +KE   +KAK + +A   +IT  + +AK   +K  ++   K+
Sbjct: 477 KQEKELRERQQEEQKEKLRKEEQEQKAKKKQEAEENEITEKQQKAKEEMEKKESEQAKKE 536

Query: 423 D-------GRSESGVTFDSLECHQDVGCVTPSKPEPKKKRKWVEARSPDCVASRLRSRS 268
           D       G+  +GV   S            S+ E    +K VE R   C    ++ +S
Sbjct: 537 DKETSAKRGKEITGVKRQS-----------KSEHETSDAKKSVEDRGKRCPTPEIQKKS 584

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>ZC3H6_MOUSE (Q8BYK8) Zinc finger CCCH-type domain-containing protein 6|
          Length = 1177

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
 Frame = -3

Query: 624 SEHTPIAKQDADLSSNTMNDAG-----EVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAP 460
           SEH    ++D +L    ++DAG     + E KE   +K +   +  RKK    +++ K+ 
Sbjct: 4   SEHAGHDREDGELEDGEIDDAGFEETQDQEAKENEKQKNEKAYRKSRKKHKKEREKKKSK 63

Query: 459 RKKITADVVCKDDGRSESGVTFDS 388
           R+K          G   S  + DS
Sbjct: 64  RRKHEKHKHNSPSGDDSSDYSLDS 87

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 27/145 (18%)
 Frame = -3

Query: 609 IAKQDADLSSNTMND---AGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAK--------- 466
           + KQD D       +   + E  ++  + ++ K    +PR++ + V+ E K         
Sbjct: 144 LKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRH 203

Query: 465 ---------APRKKITA------DVVCKDDGRSESGVTFDSLECHQDVGCVTPSKPEPKK 331
                    AP KK  +       V  KD    E+  T D L+  +      P +P P+K
Sbjct: 204 RTKSRSPSPAPEKKEKSPELPEPSVRMKDSSVQEATSTSDILKAPKPEPVPEPKEPSPEK 263

Query: 330 KRKWVEARSPDCVASRLRSRSAPKS 256
             K  + ++     SR +SRS  +S
Sbjct: 264 NSKKEKEKTRPRSRSRSKSRSRTRS 288

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>T2FA_DROME (Q05913) Transcription initiation factor IIF alpha subunit (EC|
           2.7.11.1) (TFIIF-alpha) (Transcription factor 5 large
           chain) (TF5A)
          Length = 577

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 14/131 (10%)
 Frame = -3

Query: 597 DADLSSNTMNDAGEVEQKEGNMKK---AKDEVKAPRKKITAVKDEAKAPRKKITADVVCK 427
           D +      +D  + E  +G  KK    KDEV   +KK    KD+ K            K
Sbjct: 343 DEEEDDEKKSDESDKEDADGEKKKKDKGKDEVSKDKKKKKPTKDDKKG-----------K 391

Query: 426 DDGRSESGVTF--DSLECHQDVGCVTPSK------PEPKKKRKWVEARSPDCVASRL--- 280
            +G  +S   F  DS +   D+    P K       + +K+++   A S   +AS     
Sbjct: 392 SNGSGDSSTDFSSDSTDSEDDLSNGPPKKKVVVKDKDKEKEKEKESAASSKVIASSSNAN 451

Query: 279 RSRSAPKS*AT 247
           +SRSA  + +T
Sbjct: 452 KSRSATPTLST 462

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>TOP2A_CHICK (O42130) DNA topoisomerase 2-alpha (EC 5.99.1.3) (DNA topoisomerase|
            II, alpha isozyme)
          Length = 1553

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 8/122 (6%)
 Frame = -3

Query: 597  DADLSSNTMNDAGEVEQKEGNMKK-AKDEVKAPRKKITAVKDEAKAPRKKITADVV---- 433
            DADL+S+   D+   E  EGN       + K P+ K    + + KAP++K   D V    
Sbjct: 1335 DADLTSSD-EDSEYQENSEGNTDSDTTSKKKPPKAKAVPKEKKGKAPKEKPLPDAVPVRV 1393

Query: 432  ---CKDDGRSESGVTFDSLECHQDVGCVTPSKPEPKKKRKWVEARSPDCVASRLRSRSAP 262
                 +    +      S+   Q V    P KP   KK    +   P  +    + ++AP
Sbjct: 1394 QNVAAESASQDPAAPPVSVPRAQAV----PKKPAAAKKGSTAKDNQPSIMDILTKKKAAP 1449

Query: 261  KS 256
            K+
Sbjct: 1450 KA 1451

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>YNP2_YEAST (P53901) Hypothetical 46.2 kDa protein in YCK2-RPC8 intergenic|
           region
          Length = 409

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
 Frame = +3

Query: 51  RASRPQQNDSKSTPHQPHPS------LLPSITYSKLNDNQQTQNTPPTRIMPVTR 197
           R  RP + DS S    PHPS      L P  T S  N N +  +  PTR  P  R
Sbjct: 353 RRDRPSRLDSSSPNSHPHPSGLNSPKLPPLPTTSNSNFNSRKNSMSPTRKRPPPR 407

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>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein|
            89)
          Length = 8081

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
 Frame = -3

Query: 654  SNELPCADEVSEHTPIAKQDADLSSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITA--- 484
            S E   A+EV   +P  K+ +   S         +++   +K A DEVK+P KK  +   
Sbjct: 1743 SPEKSAAEEVK--SPTKKEKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPEK 1800

Query: 483  VKDEAKAPRKK-----ITADVVCKDDGRSESGVTFDSLECHQDVGCVTPSKPEPKKKRKW 319
            V+++  +P KK      +A    K   + E   +  + +   +    +P KPE K K   
Sbjct: 1801 VEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSP- 1859

Query: 318  VEARSPDCVASRLRSRS 268
               +SP     + +S+S
Sbjct: 1860 TPKKSPPGSPKKKKSKS 1876

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>ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing protein 6|
          Length = 1189

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = -3

Query: 624 SEHTPIAKQDADLSSNTMNDAG-----EVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAP 460
           SEH    ++D +L    ++DAG     + E KE   +K +   +  RKK    +++ K+ 
Sbjct: 4   SEHAGHDREDGELEDGEIDDAGFEETQDQEAKENEKQKNEKAYRKSRKKHKKEREKKKSK 63

Query: 459 RKK 451
           R+K
Sbjct: 64  RRK 66

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>AMDR_ASPOR (Q06157) Acetamidase regulatory protein|
          Length = 775

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
 Frame = +3

Query: 51  RASRPQQNDSKSTPHQPHPSLLPSITYSKLNDNQQTQNTPPTRI-------MPVTR*PPA 209
           R S   QN + + P  PHP+  P++  +    + QT+  PP  +       MP T   P 
Sbjct: 637 RFSTHDQNKNTTNPSNPHPTPTPNLNSNTTIQSAQTEPRPPYEVPTPESPRMPPTTMSPH 696

Query: 210 QKE 218
           Q +
Sbjct: 697 QNQ 699

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>NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)|
           (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar
           and coiled-body phosphoprotein 1)
          Length = 704

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 6/116 (5%)
 Frame = -3

Query: 585 SSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDE--AKAPRKKIT----ADVVCKD 424
           SS   +   E EQK+   KKA      P   ++  K    A++P+K       AD     
Sbjct: 276 SSEDSSSEEEEEQKKPMKKKAGPYSSVPPPSVSLSKKSVGAQSPKKAAAQTQPADSSADS 335

Query: 423 DGRSESGVTFDSLECHQDVGCVTPSKPEPKKKRKWVEARSPDCVASRLRSRSAPKS 256
              S+S    +     + V   TP+KP P KK+    + S D  +S   + + P S
Sbjct: 336 SEESDSSSEEEKKTPAKTVVSKTPAKPAPVKKKAESSSDSSDSDSSEDEAPAKPVS 391

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>MUCAP_PIG (P12021) Apomucin (Mucin core protein) (Fragment)|
          Length = 1150

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 1/111 (0%)
 Frame = -3

Query: 630  EVSEHTPIAKQDADLSS-NTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAPRK 454
            E +    +   +A +SS N+    G    +EG  ++A +   APR   T     + +  K
Sbjct: 837  EATTFKGVGTTEAGISSGNSPGSGGVTSSQEGTSREASETTTAPRISATG----STSVSK 892

Query: 453  KITADVVCKDDGRSESGVTFDSLECHQDVGCVTPSKPEPKKKRKWVEARSP 301
            +ITA         + +G T D  E     GC  P  P P       E +SP
Sbjct: 893  EITASPKVSSP-ETTAGATEDQ-ENENKTGCPAPLPPPPVCHGPLGEEKSP 941

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>SYF2_KLULA (Q6CPI4) Pre-mRNA-splicing factor SYF2|
          Length = 221

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 19/71 (26%), Positives = 34/71 (47%)
 Frame = -3

Query: 594 ADLSSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAPRKKITADVVCKDDGR 415
           AD   + MND  E+E+K  +++K K EV    KK    +++  + R+  +     +D  R
Sbjct: 29  ADNKYSKMNDLMEIEKKLKSLRKQKVEVSIRNKKAIIAEEKKNSERRVYSMADDGEDKAR 88

Query: 414 SESGVTFDSLE 382
           S      D ++
Sbjct: 89  SNKSEPEDPIK 99

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>HSLU_VIBCH (Q9KNQ7) ATP-dependent hsl protease ATP-binding subunit hslU|
          Length = 443

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = +2

Query: 191 DKITTCAKGVV-GPHKSQDQVAHDLGADRERSLLATQSGLLASTHFLFFFGSGLDGVTQP 367
           DKI  C +G V GP  S++ V  DL    E S ++T+ G++ + H L F  SG   V +P
Sbjct: 259 DKI--CKRGEVSGPDVSREGVQRDLLPLIEGSTVSTKHGMVRTDHIL-FIASGAFQVAKP 315

Query: 368 T 370
           +
Sbjct: 316 S 316

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>FKBP4_CRYNE (Q5KIJ5) FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl|
           cis-trans isomerase) (PPIase) (Rotamase)
          Length = 405

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 30/77 (38%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
 Frame = -3

Query: 645 LPCADE--VSEHTPIAKQDAD-LSSNTMNDAG-EVEQKEGNMKKAKDEVKAPRKKITAV- 481
           LP AD+  V E  P  K+ A+ L S    DA     QK+   KKAK E +   +K  A  
Sbjct: 221 LPAADKKPVPEAKPAQKRKAEELESPAKEDAALSKAQKKKLAKKAKVEGEKAEEKPAAAA 280

Query: 480 -------KDEAKAPRKK 451
                  K EAKAP+KK
Sbjct: 281 VAEKPATKKEAKAPQKK 297

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>H1_NEUCR (Q8J0U2) Histone H1|
          Length = 236

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -3

Query: 549 QKEGNMKKAKDEVKAPRKKITAVKDEAKAPRKKI 448
           +KEG  KK   E KAP  K  A   +A AP+K++
Sbjct: 136 KKEGAAKKETKEKKAPAAKKAAAPKKAAAPKKEV 169

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>IF2P_HUMAN (O60841) Eukaryotic translation initiation factor 5B (eIF-5B)|
           (Translation initiation factor IF-2)
          Length = 1220

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
 Frame = -3

Query: 645 LPCADEVSEHTPIAKQDADLSSNTMNDA----GEVEQKEGNMKK--AKDEVKAPRKKITA 484
           +P ++E +E TP A +D +       D     GE E+KE   KK  +K  VKA ++ +  
Sbjct: 292 IPASEEKAE-TPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAK 350

Query: 483 VKDEAKAPRKK 451
           +K+E +  +++
Sbjct: 351 LKEEEERQKRE 361

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>HD2A_SOLCH (Q6V9I6) Histone deacetylase 2a (HD2a) (ScHD2a)|
          Length = 269

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 27/107 (25%), Positives = 47/107 (43%)
 Frame = -3

Query: 642 PCADEVSEHTPIAKQDADLSSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAKA 463
           P  +E  +     + D D+   T+ ++G+ E KE     A  +  + ++K+  V+     
Sbjct: 97  PFEEEEDDEDDYDESDEDIPL-TLANSGKPEPKEAGKSNAGKDSASGKQKVRIVE----- 150

Query: 462 PRKKITADVVCKDDGRSESGVTFDSLECHQDVGCVTPSKPEPKKKRK 322
           P K    +    DD  S+ G   D  +  ++    TP K EP K+RK
Sbjct: 151 PTKDDEDE--SSDDDDSDMGEDEDDSDDSEEE---TPKKAEPAKRRK 192

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>IGA1_STRSA (Q59986) Immunoglobulin A1 protease precursor (EC 3.4.24.13) (IgA1|
           protease) (IgA-specific zinc metalloproteinase)
          Length = 1854

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
 Frame = -3

Query: 603 KQDADLSSNTMNDAGEVEQKE---------GNMKKAKDEVKAPRKKITAVKDEAKAPRKK 451
           +Q A L   T + AG + + E         GN++ A  E + P +K    K++ + P K 
Sbjct: 510 EQVASLPEYTGSQAGAIVEPEQVEPPQEYTGNIEPAAPEAENPTEKAQEPKEQKQEPEKN 569

Query: 450 I------TADVVCKDDGRSESGVTFDSLECHQD 370
           I        ++    DG+ +  V+ D++  +Q+
Sbjct: 570 IELRNVSDVELYSLADGKYKQHVSLDAIPSNQE 602

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>SEC62_CHICK (Q5F3A1) Translocation protein SEC62 (Translocation protein 1)|
           (TP-1)
          Length = 398

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = -3

Query: 534 MKKAKDEVKAPRK-KITAVKDEAKAPRKKITADVVCKDDGRSESGVTFDSLECHQDVGCV 358
           MK  KD  K   K K  + K+E K  +K+ + D   K +   E     +  EC +D    
Sbjct: 100 MKPDKDTKKEKEKGKAESGKEEEKKSKKESSKDEKTKKE--KEKKKDGEKEECKKDETPG 157

Query: 357 TPSKPEPKKKRK 322
           TP K E K+K K
Sbjct: 158 TPKKKETKRKFK 169

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>AP3B2_MOUSE (Q9JME5) AP-3 complex subunit beta-2 (Adapter-related protein|
           complex 3 beta-2 subunit) (Beta3B-adaptin) (Adaptor
           protein complex AP-3 beta-2 subunit) (Clathrin assembly
           protein complex 3 beta-2 large chain)
          Length = 1082

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 22/87 (25%), Positives = 41/87 (47%)
 Frame = -3

Query: 642 PCADEVSEHTPIAKQDADLSSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAKA 463
           P ++  SE    +   +  SS+  ++  E E+K G  +  + E +  +KK T  K  ++ 
Sbjct: 695 PESESESESKSSSGSGSGESSSESDNEEEDEEKGGGSESEQSEEEDEKKKKTKKKKASEG 754

Query: 462 PRKKITADVVCKDDGRSESGVTFDSLE 382
            R+  +++        SES VT +S E
Sbjct: 755 HREGSSSEEGSDSSSSSESEVTSESEE 781

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>AP3B2_HUMAN (Q13367) AP-3 complex subunit beta-2 (Adapter-related protein complex|
            3 beta-2 subunit) (Beta3B-adaptin) (Adaptor protein
            complex AP-3 beta-2 subunit) (AP-3 complex beta-2
            subunit) (Clathrin assembly protein complex 3 beta-2
            large chain) (Neu
          Length = 1082

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 31/144 (21%), Positives = 56/144 (38%)
 Frame = -3

Query: 630  EVSEHTPIAKQDADLSSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAPRKK 451
            E ++  P ++ ++D  S++ + +GE   +  N  + +DE K    +    +++ K   KK
Sbjct: 689  ESADSDPESESESDSKSSSESGSGESSSESDNEDQDEDEEKGRGSESEQSEEDGKRKTKK 748

Query: 450  ITADVVCKDDGRSESGVTFDSLECHQDVGCVTPSKPEPKKKRKWVEARSPDCVASRLRSR 271
               +   +    S S    DS     +    + S+ E  +   W     P        S+
Sbjct: 749  KVPE---RKGEASSSDEGSDSSSSSSESEMTSESEEEQLEPASWSRKTPPS-------SK 798

Query: 270  SAPKS*AT*SCDL*GPTTPFAQVV 199
            SAP +      DL   T P  Q V
Sbjct: 799  SAPATKEISLLDLEDFTPPSVQPV 822

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>ADA33_MOUSE (Q923W9) ADAM 33 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 33)
          Length = 797

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 19/56 (33%), Positives = 21/56 (37%)
 Frame = +3

Query: 459 WGPWLHP*QQ*SSSWGP*LHPWPSSCFLPSAQLHQHHSSCCCSDQHPAWQLVCAQR 626
           W P L   QQ    WGP   P P  CF     +     +  C   H    L CAQR
Sbjct: 519 WCPTLE--QQCQQLWGPGSKPAPEPCFQQMNSMGNSQGN--CGQDHKGSFLPCAQR 570

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>MAK5_EMENI (Q5BCI0) ATP-dependent RNA helicase mak5 (EC 3.6.1.-)|
          Length = 770

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
 Frame = -3

Query: 609 IAKQDADLSSNTMNDAGEVEQKEGNMKKAKDEVKA--PRKKITAVKDEAKAPRKKITADV 436
           + K++   + N +  A +V  K+G   K K ++KA  P+KK+   K++  A  K      
Sbjct: 119 LEKKEGASTVNEVAKAADVNGKKGKDAKNKKDIKAKEPKKKLKEQKEKDGAQAK------ 172

Query: 435 VCKDDGRSESGVTFDSLECHQD 370
               D    SG++F +LE   D
Sbjct: 173 ----DRSITSGLSFAALEDEAD 190

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>I15RA_MOUSE (Q60819) Interleukin-15 receptor alpha chain precursor|
           (IL-15R-alpha) (IL-15RA)
          Length = 263

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
 Frame = +3

Query: 84  STPHQPHPSLLPSITYSKLNDNQQTQNTPPTRIMPVTR*PPAQKESSALT---SHK---- 242
           S P  P PS      +S  +D   T  T  T IMP +R  P+Q  S+  T   SHK    
Sbjct: 118 SQPESPSPSAKEPEAFSPKSD---TAMTTETAIMPGSRLTPSQTTSAGTTGTGSHKSSRA 174

Query: 243 --IKLLMTWEQTGSAA 284
             +   MT E T S +
Sbjct: 175 PSLAATMTLEPTASTS 190

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>RBP2_BOVIN (P48820) Ran-binding protein 2 (RanBP2) (Nuclear pore complex|
           protein Nup358) (Nucleoporin Nup358) (358 kDa
           nucleoporin) (P270) (Fragment)
          Length = 1085

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 26/102 (25%), Positives = 42/102 (41%)
 Frame = -3

Query: 588 LSSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAPRKKITADVVCKDDGRSE 409
           + S+T  D G  E  +  ++K ++  K+  + I +  D       K+T   +CK +   E
Sbjct: 605 ICSDTDEDNGNAEDFQSELQKVQEAQKSQDENIASSADGMCTDDTKVTVPFLCKSE---E 661

Query: 408 SGVTFDSLECHQDVGCVTPSKPEPKKKRKWVEARSPDCVASR 283
              T  S+     V   T  KP     RK  +A S   V S+
Sbjct: 662 PEFTTKSVS-SPSVSSGTVDKPVDLSTRKENDADSTSQVESK 702

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>FABH_STRP6 (Q5XAE0) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase III)
           (Beta-ketoacyl-ACP synthase III) (KAS III)
          Length = 324

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 26/91 (28%), Positives = 39/91 (42%)
 Frame = +2

Query: 215 GVVGPHKSQDQVAHDLGADRERSLLATQSGLLASTHFLFFFGSGLDGVTQPTSW*HSRES 394
           G+   H S+D++  DL       LL TQSGL A+          +D +   T        
Sbjct: 39  GIAERHISRDEMTSDLAIQVADQLL-TQSGLKANA---------IDFIIVAT-------- 80

Query: 395 NVTPDSLLPSSLQTTSAVIFFLGALASSLTA 487
            ++PD+ +PS+     A I    A A  +TA
Sbjct: 81  -ISPDATMPSTAAKVQAAIAATSAFAFDMTA 110

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>VAT1_BRARE (Q8JFV8) Synaptic vesicle membrane protein VAT-1 homolog (EC|
           1.-.-.-)
          Length = 484

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = -3

Query: 600 QDADLSSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAPRKKITADVVCKDD 421
           ++ +       D  + + K+ + KK  D+ K  +KK  A K+E K  +KK  A    KDD
Sbjct: 413 KEEEKKEEAKKDEEKKDDKKKDDKKKDDKKKEDKKKDEAKKEEKKDEKKKEEAK---KDD 469

Query: 420 GRSE 409
            ++E
Sbjct: 470 KKAE 473

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>SLA1_YEAST (P32790) Cytoskeleton assembly control protein SLA1|
          Length = 1244

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 9/90 (10%)
 Frame = -3

Query: 555 VEQKEGNMKKAKDEVKAPRKKITAVKDEAKA-PRKKITADVVCKDDGRSESGVTF----- 394
           V  K+     A   +K+ +K  T     +++  R K  A+   KDD      V       
Sbjct: 413 VRDKKHTESTASGIIKSIKKNFTKSPSRSRSRSRSKSNANASWKDDELQNDVVGSAAGKR 472

Query: 393 ---DSLECHQDVGCVTPSKPEPKKKRKWVE 313
               SL  H+     T   P PKK R WV+
Sbjct: 473 SRKSSLSSHKKNSSATKDFPNPKKSRLWVD 502

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>NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2318

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +3

Query: 48   SRASRPQQNDSKSTPHQPHPSLLPSITYSKLNDNQQTQNTPPTRIM 185
            S A+      S + P QPHP  +PS+  S+     Q + TP  ++M
Sbjct: 2272 SPATATNATASGALPAQPHPISVPSLPQSQTQLGPQPEVTPKRQVM 2317

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>NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa neurofilament|
           protein) (Neurofilament medium polypeptide) (NF-M)
           (Neurofilament 3)
          Length = 915

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 23/103 (22%), Positives = 47/103 (45%)
 Frame = -3

Query: 630 EVSEHTPIAKQDADLSSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAPRKK 451
           E    +P+ K   +  + +  + G+ EQKE   K+ K+  K   +K+   +++ K   +K
Sbjct: 674 EEKAKSPVPKSPVE-EAKSKAEVGKGEQKEEEEKEVKEAPK--EEKVEKKEEKPKDVPEK 730

Query: 450 ITADVVCKDDGRSESGVTFDSLECHQDVGCVTPSKPEPKKKRK 322
             A+   K++  +E      S++ H +       KP  ++K K
Sbjct: 731 KKAESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEK 773

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>FABH_STRP8 (P64115) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase III)
           (Beta-ketoacyl-ACP synthase III) (KAS III)
          Length = 324

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 26/91 (28%), Positives = 38/91 (41%)
 Frame = +2

Query: 215 GVVGPHKSQDQVAHDLGADRERSLLATQSGLLASTHFLFFFGSGLDGVTQPTSW*HSRES 394
           G+   H S+D++  DL       LL TQSGL A           +D +   T        
Sbjct: 39  GIAERHISRDEMTSDLAIQVADQLL-TQSGLKADA---------IDFIIVAT-------- 80

Query: 395 NVTPDSLLPSSLQTTSAVIFFLGALASSLTA 487
            ++PD+ +PS+     A I    A A  +TA
Sbjct: 81  -ISPDATMPSTAAKVQAAIAATSAFAFDMTA 110

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>FABH_STRP3 (P64114) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase III)
           (Beta-ketoacyl-ACP synthase III) (KAS III)
          Length = 324

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 26/91 (28%), Positives = 38/91 (41%)
 Frame = +2

Query: 215 GVVGPHKSQDQVAHDLGADRERSLLATQSGLLASTHFLFFFGSGLDGVTQPTSW*HSRES 394
           G+   H S+D++  DL       LL TQSGL A           +D +   T        
Sbjct: 39  GIAERHISRDEMTSDLAIQVADQLL-TQSGLKADA---------IDFIIVAT-------- 80

Query: 395 NVTPDSLLPSSLQTTSAVIFFLGALASSLTA 487
            ++PD+ +PS+     A I    A A  +TA
Sbjct: 81  -ISPDATMPSTAAKVQAAIAATSAFAFDMTA 110

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>FABH_STRP1 (Q99YD2) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase III)
           (Beta-ketoacyl-ACP synthase III) (KAS III)
          Length = 324

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 26/91 (28%), Positives = 38/91 (41%)
 Frame = +2

Query: 215 GVVGPHKSQDQVAHDLGADRERSLLATQSGLLASTHFLFFFGSGLDGVTQPTSW*HSRES 394
           G+   H S+D++  DL       LL TQSGL A           +D +   T        
Sbjct: 39  GIAERHISRDEMTSDLAIQVADQLL-TQSGLKADA---------IDFIIVAT-------- 80

Query: 395 NVTPDSLLPSSLQTTSAVIFFLGALASSLTA 487
            ++PD+ +PS+     A I    A A  +TA
Sbjct: 81  -ISPDATMPSTAAKVQAAIAATSAFAFDMTA 110

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>ASA1_ENTFA (P17953) Aggregation substance precursor|
          Length = 1296

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
 Frame = +2

Query: 32  QHDKPEPSVKATTK**QVHTTPATSITASLNYLQQTKRQPTNPKHTTNQNHASDK----- 196
           Q D P+P V +TT        P T++T      + T  QPT  +   ++ + +++     
Sbjct: 56  QPDNPDPQVGSTT--------PKTAVTEEATVQKDTTSQPTKVEEVASEKNGAEQSSATP 107

Query: 197 --ITTCAKGVVGPHKSQDQ 247
              T   +  VG  KS  +
Sbjct: 108 NDTTNAQQPTVGAEKSAQE 126

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>YN86_YEAST (P27514) Hypothetical 99.5 kDa protein in URK1-SMM1 intergenic|
           region
          Length = 894

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = -3

Query: 597 DADLSSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAPRKKITADVV 433
           DAD  +N  N +G  E ++GN ++  D   A R+  + ++D     R  +  D++
Sbjct: 301 DADRINNDENSSGNEEDEDGNRQEVLDFQDAERELSSHLRDHVVWERNTVWKDMM 355

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>SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent regulator|
            of chromatin subfamily C member 2 (SWI/SNF complex 170
            kDa subunit) (BRG1-associated factor 170)
          Length = 1214

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
 Frame = -3

Query: 621  EHTPIAKQDADLSSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAPRKKITA 442
            E + IA   +D          +  + EG     K E K PR+   A+++EA    K+ T+
Sbjct: 736  ESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEA----KEKTS 791

Query: 441  DVVCKDDGRSESGVTFDSLECHQDVGCVTPSK-PEPKKKRKWV 316
            +   KD+ + + G +    E       V P K  EPK+ ++ V
Sbjct: 792  EAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEV 834

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>RP3A_HUMAN (Q9Y2J0) Rabphilin-3A (Exophilin-1)|
          Length = 694

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
 Frame = +3

Query: 51  RASRPQQNDSK-STPHQP-----HPSLLPSITYS--KLNDNQQTQNTPPTRIMPVTR*PP 206
           + ++PQQ  S+ + P QP     HP+  P+   S  +    Q+T   P +        PP
Sbjct: 173 KKTKPQQPVSEPAAPEQPAPEPKHPARAPARGDSEDRRGPGQKTGPDPASAPGRGNYGPP 232

Query: 207 AQKESSALTSHKIKLLMTWEQTGSAACLRRSQGFLLRPTXXXXXAPA 347
            ++ S A  S   +   +W+ +G A    RS   L R        PA
Sbjct: 233 VRRASEARMSSSSRDSESWDHSGGAGDSSRSPAGLRRANSVQASRPA 279

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>NPAS3_MOUSE (Q9QZQ0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of|
           PAS protein 6) (MOP6)
          Length = 925

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 20/77 (25%), Positives = 31/77 (40%)
 Frame = -3

Query: 636 ADEVSEHTPIAKQDADLSSNTMNDAGEVEQKEGNMKKAKDEVKAPRKKITAVKDEAKAPR 457
           A E SE +       D S  T ++      ++GN  +  ++ +  RKK  +  D      
Sbjct: 460 ASESSETSDSESDSKDTSGITEDNENSKSDEKGNQSENSEDPEPDRKKSGSACDN----- 514

Query: 456 KKITADVVCKDDGRSES 406
                D+ C DDG S S
Sbjct: 515 -----DMNCNDDGHSSS 526

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>NOTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1 precursor (Notch|
           1) (Motch A) (mT14) (p300) [Contains: Notch 1
           extracellular truncation; Notch 1 intracellular domain]
          Length = 2531

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 149 PTNPKHTTNQNHASDK-ITTCAKGVVGPHKSQDQVAHDLGADR 274
           P N     + N  + K I TC  G  GP  SQD    DLGA+R
Sbjct: 380 PCNEGSNCDTNPVNGKRICTCPSGYTGPACSQDVDECDLGANR 422

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>XPO5_MOUSE (Q924C1) Exportin-5 (Ran-binding protein 21)|
          Length = 1204

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 522  WPSSCFLPSAQLHQHHSSCCCSDQHPAWQLVCAQRPR 632
            W  +  L   Q+H  H  C  S  H A+Q+  A RPR
Sbjct: 1071 WLFTSVLKGLQMHGQHDGCMASLVHLAFQIYEALRPR 1107

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>XPO5_HUMAN (Q9HAV4) Exportin-5 (Exp5) (Ran-binding protein 21)|
          Length = 1204

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 522  WPSSCFLPSAQLHQHHSSCCCSDQHPAWQLVCAQRPR 632
            W  +  L   Q+H  H  C  S  H A+Q+  A RPR
Sbjct: 1071 WLFTSVLKGLQMHGQHDGCMASLVHLAFQIYEALRPR 1107


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,296,372
Number of Sequences: 219361
Number of extensions: 2110455
Number of successful extensions: 8753
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 8010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8692
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result