ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32a16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through... 291 1e-75
2ref|XM_475776.1| Oryza sativa (japonica cultivar-group), predic... 137 5e-29
3dbj|AK105140.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 5e-29
4gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome... 119 1e-23
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
6gb|AF467541.1| Zea mays putative aldehyde dehydrogenase MIS1 (mi... 90 1e-14
7gb|L14930.1|SOYRAB7P Glycine max (Rab7p) mRNA, complete cds 64 6e-07
8gb|BC102415.1| Bos taurus similar to Ras-related protein Rab-7, ... 60 1e-05
9ref|NM_001035081.1| Bos taurus similar to Ras-related protein Ra... 60 1e-05
10gb|DQ056142.1| Coprinellus disseminatus strain C345.1 putative G... 58 4e-05
11ref|NM_191744.1| Oryza sativa (japonica cultivar-group), predic... 56 2e-04
12ref|XM_791270.1| PREDICTED: Strongylocentrotus purpuratus rab7 G... 56 2e-04
13ref|NM_001008025.1| Xenopus tropicalis MGC79525 protein (MGC7952... 56 2e-04
14dbj|AK111495.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
15gb|BC080905.1| Xenopus tropicalis MGC79525 protein, mRNA (cDNA c... 56 2e-04
16emb|CR926163.1| Xenopus tropicalis finished cDNA, clone TNeu128d01 56 2e-04
17gb|BC077884.1| Xenopus laevis RAB7, member RAS oncogene family, ... 54 6e-04
18ref|XM_414359.1| PREDICTED: Gallus gallus similar to Ras-related... 54 6e-04
19gb|BC060401.1| Xenopus laevis hypothetical protein MGC68523, mRN... 54 6e-04
20emb|CR406454.1| Gallus gallus finished cDNA, clone ChEST950l22 54 6e-04
21gb|AY871298.1| Gekko japonicus GekBS079P mRNA, complete cds 54 6e-04
22ref|XM_346351.2| PREDICTED: Rattus norvegicus similar to RAB9B, ... 52 0.002
23gb|BC107383.1| Mus musculus RAB9B, member RAS oncogene family, m... 50 0.009
24ref|NM_176971.1| Mus musculus RAB9B, member RAS oncogene family ... 50 0.009
25gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 50 0.009
26ref|XM_385317.1| Gibberella zeae PH-1 chromosome 3 RAB7_NEUCR Pr... 50 0.009
27ref|XM_567629.1| Cryptococcus neoformans var. neoformans JEC21 R... 50 0.009
28gb|AF079459.1| Drosophila melanogaster small ras-like GTPase (ra... 50 0.009
29ref|NM_079748.2| Drosophila melanogaster Rab-protein 7 CG5915-RA... 50 0.009
30dbj|AK161867.1| Mus musculus adult male medulla oblongata cDNA, ... 50 0.009
31gb|AY060236.1| Drosophila melanogaster GH03685 full length cDNA 50 0.009
32dbj|AK049693.1| Mus musculus 12 days embryo spinal cord cDNA, RI... 50 0.009
33dbj|AK034442.1| Mus musculus adult male diencephalon cDNA, RIKEN... 50 0.009
34gb|AC007929.8|AC007929 Drosophila melanogaster, chromosome 3R, r... 50 0.009
35gb|AC008202.4|AC008202 Drosophila melanogaster, chromosome 3R, r... 50 0.009
36gb|AF263363.1|AF263363 Drosophila melanogaster small ras-like GT... 50 0.009
37gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83... 50 0.009
38dbj|AB035672.1| Drosophila melanogaster mRNA for Rab7 protein, c... 50 0.009
39emb|AL672008.8| Mouse DNA sequence from clone RP23-389M3 on chro... 50 0.009
40ref|XM_526302.1| PREDICTED: Pan troglodytes similar to Ras-relat... 48 0.037
41gb|BC072717.1| Danio rerio zgc:91909, mRNA (cDNA clone MGC:91909... 48 0.037
42ref|NM_004637.5| Homo sapiens RAB7, member RAS oncogene family (... 48 0.037
43gb|U44104.1|HSU44104 Homo sapiens small GTP binding protein Rab7... 48 0.037
44emb|X93499.1|HSRAB7 H.sapiens mRNA for RAB7 protein 48 0.037
45gb|BC008721.2| Homo sapiens RAB7, member RAS oncogene family, mR... 48 0.037
46emb|CR859246.1| Pongo pygmaeus mRNA; cDNA DKFZp459E131 (from clo... 48 0.037
47gb|AF498942.1| Homo sapiens small GTP binding protein RAB7 (RAB7... 48 0.037
48ref|XM_682020.1| PREDICTED: Danio rerio similar to Ras-related p... 48 0.037
49ref|NM_001002178.1| Danio rerio zgc:91909 (zgc:91909), mRNA 48 0.037
50gb|AC023598.30| Homo sapiens 3 BAC RP11-221E20 (Roswell Park Can... 48 0.037
51dbj|AK000826.1| Homo sapiens cDNA FLJ20819 fis, clone ADSE00511 48 0.037
52gb|AF050175.1|AF050175 Homo sapiens Rab7 (Rab7) gene, complete cds 48 0.037
53emb|BX537775.1|HSM805862 Homo sapiens mRNA; cDNA DKFZp779L0164 (... 48 0.037
54gb|BC013728.1| Homo sapiens RAB7, member RAS oncogene family, mR... 48 0.037
55gb|U13170.1|CRU13170 Chlamydomonas reinhardtii YptC5 (yptC5) gen... 48 0.037
56gb|AF050174.1|AF050174 Oryctolagus cuniculus Rab7 (Rab7) mRNA, c... 46 0.15
57gb|L29276.1|TOBNTRAI Nicotiana tabacum SR1 Nt-rab7c mRNA, comple... 46 0.15
58gb|L14928.1|VIRRAB7P Vigna aconitifolia (Rab7p) mRNA, complete cds 46 0.15
59ref|XM_529084.1| PREDICTED: Pan troglodytes similar to Ras-relat... 44 0.57
60gb|AY190723.1| Pagrus major RAP2B-like protein mRNA, complete cds 44 0.57
61ref|XM_589286.2| PREDICTED: Bos taurus similar to olfactory rece... 44 0.57
62ref|XM_867247.1| PREDICTED: Bos taurus similar to Ras-related pr... 44 0.57
63ref|NM_016370.1| Homo sapiens RAB9B, member RAS oncogene family ... 44 0.57
64ref|XM_538124.2| PREDICTED: Canis familiaris similar to Ras-rela... 44 0.57
65emb|Z73940.1|LJRAB7A L.japonicus mRNA for small GTP-binding prot... 44 0.57
66emb|AL139228.1| Human DNA sequence from clone RP4-540A13 on chro... 44 0.57
67gb|BC070069.1| Homo sapiens cDNA clone IMAGE:5261286, containing... 44 0.57
68emb|CR861121.1| Pongo pygmaeus mRNA; cDNA DKFZp459C0214 (from cl... 44 0.57
69gb|BC093758.1| Homo sapiens RAB9B, member RAS oncogene family, m... 44 0.57
70gb|BC093756.1| Homo sapiens RAB9B, member RAS oncogene family, m... 44 0.57
71ref|NM_001003316.1| Canis familiaris RAB7, member RAS oncogene f... 44 0.57
72gb|BC041336.1| Homo sapiens cDNA clone IMAGE:5274429, containing... 44 0.57
73gb|M35522.1|DOGRAB7A C.familiaris GTP-binding protein (rab7) mRN... 44 0.57
74dbj|AB036693.1| Homo sapiens mRNA for RAB9-like protein, complet... 44 0.57
75ref|XM_505628.1| Yarrowia lipolytica CLIB122, YALI0F19602g predi... 42 2.3
76emb|BX294147.1| Pirellula sp. strain 1 complete genome; segment ... 42 2.3
77gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, comp... 42 2.3
78gb|U86932.1|MCU86932 Molluscum contagiosum virus subtype 1 clone... 42 2.3
79dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
80dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
81dbj|AP000711.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 42 2.3
82dbj|AP001554.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.3
83emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 42 2.3
84gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.0
85emb|CR698058.1|CNS0G1KM Tetraodon nigroviridis full-length cDNA 40 9.0
86gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosom... 40 9.0
87emb|BX901972.12| Zebrafish DNA sequence from clone DKEY-24H22 in... 40 9.0
88emb|AL390789.13| Human DNA sequence from clone RP11-572N15 on ch... 40 9.0
89emb|AL591174.13| Mouse DNA sequence from clone RP23-271B20 on ch... 40 9.0
90gb|AF243079.1| Helicobacter sp. cytolethal distending toxin subu... 40 9.0
91dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
92gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
93emb|CR925787.5| Zebrafish DNA sequence from clone DKEYP-110H2 in... 40 9.0
94gb|AC132311.2| Mus musculus BAC clone RP24-297P22 from 8, comple... 40 9.0 
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial
           cds; and delta-1-pyrroline-5-carboxylate dehydrogenase
           (P5CDH) gene, complete cds
          Length = 13878

 Score =  291 bits (147), Expect = 1e-75
 Identities = 147/147 (100%)
 Strand = Plus / Plus

                                                                       
Query: 319 atgtcttgatcgtgctcatgctccaaggcaagcttggcgatgcacaggaaagcagtgtcg 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 atgtcttgatcgtgctcatgctccaaggcaagcttggcgatgcacaggaaagcagtgtcg 174

                                                                       
Query: 379 acattgcagtcgtccttggccgaggtttcaaagtagggaatgtcgcccttggcgacgcac 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 acattgcagtcgtccttggccgaggtttcaaagtagggaatgtcgcccttggcgacgcac 234

                                      
Query: 439 cagtcctttgctttcttctcgggaacc 465
           |||||||||||||||||||||||||||
Sbjct: 235 cagtcctttgctttcttctcgggaacc 261



 Score =  224 bits (113), Expect = 3e-55
 Identities = 113/113 (100%)
 Strand = Plus / Plus

                                                                       
Query: 545 cttggttgatgaactcgtcgtgccaggtaccgagcgtattgaaggttcttttggcattga 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 cttggttgatgaactcgtcgtgccaggtaccgagcgtattgaaggttcttttggcattga 918

                                                                
Query: 605 cgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccacgccgagg 657
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 cgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccacgccgagg 971



 Score =  165 bits (83), Expect = 2e-37
 Identities = 83/83 (100%)
 Strand = Plus / Plus

                                                                       
Query: 463 accactcgtctgctcccagagtccagatcgaccttgttcccgaccaaaatgaagggaaac 522
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 accactcgtctgctcccagagtccagatcgaccttgttcccgaccaaaatgaagggaaac 391

                                  
Query: 523 tgcttcgggtctgatgggccagc 545
           |||||||||||||||||||||||
Sbjct: 392 tgcttcgggtctgatgggccagc 414
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>ref|XM_475776.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 594

 Score =  137 bits (69), Expect = 5e-29
 Identities = 129/149 (86%)
 Strand = Plus / Minus

                                                                       
Query: 310 ttgaagtagatgtcttgatcgtgctcatgctccaaggcaagcttggcgatgcacaggaaa 369
           |||||||||||||| ||||| |||||||||||||  ||||||||||| |||||||| |||
Sbjct: 539 ttgaagtagatgtcctgatcatgctcatgctccagagcaagcttggcaatgcacagaaaa 480

                                                                       
Query: 370 gcagtgtcgacattgcagtcgtccttggccgaggtttcaaagtagggaatgtcgcccttg 429
           ||| |||| |||||| ||||||| || || |||||||| || || ||||||| ||| |||
Sbjct: 479 gcactgtcaacattgtagtcgtctttcgcagaggtttcgaaatacggaatgttgcctttg 420

                                        
Query: 430 gcgacgcaccagtcctttgctttcttctc 458
           | ||||||||| || ||||||||||||||
Sbjct: 419 gagacgcaccactcttttgctttcttctc 391



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 119/146 (81%)
 Strand = Plus / Minus

                                                                       
Query: 511 atgaagggaaactgcttcgggtctgatgggccagcttggttgatgaactcgtcgtgccag 570
           ||||||||||| || || || |||||||||| ||||||| ||| |||||| || ||||||
Sbjct: 338 atgaagggaaaatgtttgggatctgatgggctagcttgggtgaggaactcatcatgccag 279

                                                                       
Query: 571 gtaccgagcgtattgaaggttcttttggcattgacgtcgtagaccagcacgcagcagtcg 630
           ||   ||| | |||||| | |||||| |||||||| |||||||| ||||  ||||| || 
Sbjct: 278 gtgttgagtgcattgaaagatcttttagcattgacatcgtagactagcatacagcaatct 219

                                     
Query: 631 gctcccctgtagaaggccacgccgag 656
           || || |||||||| ||||| |||||
Sbjct: 218 gcacctctgtagaacgccacaccgag 193
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>dbj|AK105140.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-H02, full
           insert sequence
          Length = 840

 Score =  137 bits (69), Expect = 5e-29
 Identities = 129/149 (86%)
 Strand = Plus / Minus

                                                                       
Query: 310 ttgaagtagatgtcttgatcgtgctcatgctccaaggcaagcttggcgatgcacaggaaa 369
           |||||||||||||| ||||| |||||||||||||  ||||||||||| |||||||| |||
Sbjct: 586 ttgaagtagatgtcctgatcatgctcatgctccagagcaagcttggcaatgcacagaaaa 527

                                                                       
Query: 370 gcagtgtcgacattgcagtcgtccttggccgaggtttcaaagtagggaatgtcgcccttg 429
           ||| |||| |||||| ||||||| || || |||||||| || || ||||||| ||| |||
Sbjct: 526 gcactgtcaacattgtagtcgtctttcgcagaggtttcgaaatacggaatgttgcctttg 467

                                        
Query: 430 gcgacgcaccagtcctttgctttcttctc 458
           | ||||||||| || ||||||||||||||
Sbjct: 466 gagacgcaccactcttttgctttcttctc 438



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 119/146 (81%)
 Strand = Plus / Minus

                                                                       
Query: 511 atgaagggaaactgcttcgggtctgatgggccagcttggttgatgaactcgtcgtgccag 570
           ||||||||||| || || || |||||||||| ||||||| ||| |||||| || ||||||
Sbjct: 385 atgaagggaaaatgtttgggatctgatgggctagcttgggtgaggaactcatcatgccag 326

                                                                       
Query: 571 gtaccgagcgtattgaaggttcttttggcattgacgtcgtagaccagcacgcagcagtcg 630
           ||   ||| | |||||| | |||||| |||||||| |||||||| ||||  ||||| || 
Sbjct: 325 gtgttgagtgcattgaaagatcttttagcattgacatcgtagactagcatacagcaatct 266

                                     
Query: 631 gctcccctgtagaaggccacgccgag 656
           || || |||||||| ||||| |||||
Sbjct: 265 gcacctctgtagaacgccacaccgag 240
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>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01,
              complete sequence
          Length = 147704

 Score =  119 bits (60), Expect = 1e-23
 Identities = 120/140 (85%)
 Strand = Plus / Minus

                                                                          
Query: 319    atgtcttgatcgtgctcatgctccaaggcaagcttggcgatgcacaggaaagcagtgtcg 378
              ||||| ||||| |||||||||||||  ||||||||||| |||||||| |||||| |||| 
Sbjct: 104087 atgtcctgatcatgctcatgctccagagcaagcttggcaatgcacagaaaagcactgtca 104028

                                                                          
Query: 379    acattgcagtcgtccttggccgaggtttcaaagtagggaatgtcgcccttggcgacgcac 438
              |||||| ||||||| || || |||||||| || || ||||||| ||| |||| |||||||
Sbjct: 104027 acattgtagtcgtctttcgcagaggtttcgaaatacggaatgttgcctttggagacgcac 103968

                                  
Query: 439    cagtcctttgctttcttctc 458
              || || ||||||||||||||
Sbjct: 103967 cactcttttgctttcttctc 103948
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  119 bits (60), Expect = 1e-23
 Identities = 120/140 (85%)
 Strand = Plus / Minus

                                                                            
Query: 319      atgtcttgatcgtgctcatgctccaaggcaagcttggcgatgcacaggaaagcagtgtcg 378
                ||||| ||||| |||||||||||||  ||||||||||| |||||||| |||||| |||| 
Sbjct: 26459396 atgtcctgatcatgctcatgctccagagcaagcttggcaatgcacagaaaagcactgtca 26459337

                                                                            
Query: 379      acattgcagtcgtccttggccgaggtttcaaagtagggaatgtcgcccttggcgacgcac 438
                |||||| ||||||| || || |||||||| || || ||||||| ||| |||| |||||||
Sbjct: 26459336 acattgtagtcgtctttcgcagaggtttcgaaatacggaatgttgcctttggagacgcac 26459277

                                    
Query: 439      cagtcctttgctttcttctc 458
                || || ||||||||||||||
Sbjct: 26459276 cactcttttgctttcttctc 26459257
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>gb|AF467541.1| Zea mays putative aldehyde dehydrogenase MIS1 (mis1) gene, complete
           cds
          Length = 11504

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 93/109 (85%)
 Strand = Plus / Plus

                                                                       
Query: 545 cttggttgatgaactcgtcgtgccaggtaccgagcgtattgaaggttcttttggcattga 604
           |||| |||| |||||| || ||||||||| |||||||||| ||| |||| ||| ||||||
Sbjct: 505 cttgattgaggaactcatcatgccaggtatcgagcgtattaaagcttctcttgacattga 564

                                                            
Query: 605 cgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccacgcc 653
           | || || |||||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 565 catcataaaccagcacacagcaatcggcacccctgtagaacgccacgcc 613



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 495 cttgttcccgaccaaaatgaagggaaa 521
           ||||||||||||||||||||| |||||
Sbjct: 85  cttgttcccgaccaaaatgaacggaaa 111
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>gb|L14930.1|SOYRAB7P Glycine max (Rab7p) mRNA, complete cds
          Length = 1166

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 403 gtttcaaagtagggaatgtcgcccttggcgacgcaccagtcctttgctttcttctcggga 462
           ||||||||||||||||| |  || || ||| | ||||||||||||||||||||||| | |
Sbjct: 711 gtttcaaagtagggaatattcccttttgcggcacaccagtcctttgctttcttctcagaa 652

                   
Query: 463 accactcg 470
           ||||||||
Sbjct: 651 accactcg 644
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>gb|BC102415.1| Bos taurus similar to Ras-related protein Rab-7, mRNA (cDNA clone
           MGC:127597 IMAGE:7949686), complete cds
          Length = 1288

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 604 acgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccacgcc 653
           |||||| | ||||| |||||||||||||| || |||||||||||||||||
Sbjct: 352 acgtcgaacaccaggacgcagcagtcggcgcctctgtagaaggccacgcc 303
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>ref|NM_001035081.1| Bos taurus similar to Ras-related protein Rab-7 (MGC127597), mRNA
          Length = 1288

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 604 acgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccacgcc 653
           |||||| | ||||| |||||||||||||| || |||||||||||||||||
Sbjct: 352 acgtcgaacaccaggacgcagcagtcggcgcctctgtagaaggccacgcc 303
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>gb|DQ056142.1| Coprinellus disseminatus strain C345.1 putative GTPase (RAB7.1),
            putative GTPase (RAB7.2), conserved hypothetical protein
            (UP14), putative sterol dehydrogenase (ERG26), putative
            transmembrane pheromone receptor (STE3.1), putative
            peptide pheromone (PHB1), peroxidase (PERO), conserved
            hypothetical protein (UP15), putative retroelement
            proteins, putative peptide pheromone (PHB2.1), putative
            transmembrane pheromone receptor (STE3.3), and putative
            peptide pheromone (PHB2.2) genes, complete cds
          Length = 41867

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                     
Query: 601  ttgacgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccacgccgagg 657
            ||||||||| |||| || |||||||||||||| || | ||||||||| |||||||||
Sbjct: 3800 ttgacgtcgaagacgaggacgcagcagtcggcgccgcggtagaaggcgacgccgagg 3856
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>ref|NM_191744.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 597

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 88/108 (81%)
 Strand = Plus / Minus

                                                                       
Query: 312 gaagtagatgtcttgatcgtgctcatgctccaaggcaagcttggcgatgcacaggaaagc 371
           |||||||||||| |||||  |||||||||| || |||||||| ||||   ||| ||| ||
Sbjct: 537 gaagtagatgtcctgatcacgctcatgctctaaagcaagcttagcgacagacaagaacgc 478

                                                           
Query: 372 agtgtcgacattgcagtcgtccttggccgaggtttcaaagtagggaat 419
           | |||||||||||| ||| || || || || |||||||| || |||||
Sbjct: 477 actgtcgacattgcggtcctcttttgcagaagtttcaaaataaggaat 430



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 532 tctgatgggccagcttggttgatgaactcgtcgtgcca 569
           |||||||||| ||||||||||| |||||| || |||||
Sbjct: 317 tctgatgggctagcttggttgaggaactcatcatgcca 280
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>ref|XM_791270.1| PREDICTED: Strongylocentrotus purpuratus rab7 GTPase homolog SUrab7
           (rab7), mRNA
          Length = 835

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 602 tgacgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccacgcc 653
           |||||||  |||| || ||||||||||| || ||||||||||||||||||||
Sbjct: 412 tgacgtcaaagactagtacgcagcagtctgcccccctgtagaaggccacgcc 361
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>ref|NM_001008025.1| Xenopus tropicalis MGC79525 protein (MGC79525), mRNA
          Length = 2202

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 602 tgacgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccacgccgagg 657
           ||||||| ||||||||||||||||||||||| || | |||||| || || ||||||
Sbjct: 385 tgacgtcatagaccagcacgcagcagtcggcccctcggtagaaagctaccccgagg 330
to top
>dbj|AK111495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E15, full
           insert sequence
          Length = 994

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 88/108 (81%)
 Strand = Plus / Minus

                                                                       
Query: 312 gaagtagatgtcttgatcgtgctcatgctccaaggcaagcttggcgatgcacaggaaagc 371
           |||||||||||| |||||  |||||||||| || |||||||| ||||   ||| ||| ||
Sbjct: 684 gaagtagatgtcctgatcacgctcatgctctaaagcaagcttagcgacagacaagaacgc 625

                                                           
Query: 372 agtgtcgacattgcagtcgtccttggccgaggtttcaaagtagggaat 419
           | |||||||||||| ||| || || || || |||||||| || |||||
Sbjct: 624 actgtcgacattgcggtcctcttttgcagaagtttcaaaataaggaat 577



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 532 tctgatgggccagcttggttgatgaactcgtcgtgcca 569
           |||||||||| ||||||||||| |||||| || |||||
Sbjct: 464 tctgatgggctagcttggttgaggaactcatcatgcca 427
to top
>gb|BC080905.1| Xenopus tropicalis MGC79525 protein, mRNA (cDNA clone MGC:79525
           IMAGE:6977707), complete cds
          Length = 2202

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 602 tgacgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccacgccgagg 657
           ||||||| ||||||||||||||||||||||| || | |||||| || || ||||||
Sbjct: 385 tgacgtcatagaccagcacgcagcagtcggcccctcggtagaaagctaccccgagg 330
to top
>emb|CR926163.1| Xenopus tropicalis finished cDNA, clone TNeu128d01
          Length = 2144

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 602 tgacgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccacgccgagg 657
           ||||||| ||||||||||||||||||||||| || | |||||| || || ||||||
Sbjct: 360 tgacgtcatagaccagcacgcagcagtcggcccctcggtagaaagctaccccgagg 305
to top
>gb|BC077884.1| Xenopus laevis RAB7, member RAS oncogene family, mRNA (cDNA clone
           MGC:80674 IMAGE:5511069), complete cds
          Length = 2153

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 602 tgacgtcgtagaccagcacgcagcagtcggctcccctgtagaa 644
           |||| |||||||||| ||||||||||||||| || ||||||||
Sbjct: 378 tgacatcgtagaccaacacgcagcagtcggcccctctgtagaa 336
to top
>ref|XM_414359.1| PREDICTED: Gallus gallus similar to Ras-related protein Rab-7
           (LOC416016), mRNA
          Length = 1969

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 613 accagcacgcagcagtcggctcccctgtagaaggc 647
           |||||||| |||||||| |||||||||||||||||
Sbjct: 362 accagcacacagcagtctgctcccctgtagaaggc 328
to top
>gb|BC060401.1| Xenopus laevis hypothetical protein MGC68523, mRNA (cDNA clone
           MGC:68523 IMAGE:4030853), complete cds
          Length = 1470

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 602 tgacgtcgtagaccagcacgcagcagtcggc 632
           ||||||||||||||| |||||||||||||||
Sbjct: 447 tgacgtcgtagaccaacacgcagcagtcggc 417
to top
>emb|CR406454.1| Gallus gallus finished cDNA, clone ChEST950l22
          Length = 818

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 613 accagcacgcagcagtcggctcccctgtagaaggc 647
           |||||||| |||||||| |||||||||||||||||
Sbjct: 362 accagcacacagcagtctgctcccctgtagaaggc 328
to top
>gb|AY871298.1| Gekko japonicus GekBS079P mRNA, complete cds
          Length = 1656

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 613 accagcacgcagcagtcggctcccctgtagaaggc 647
           ||||||||||||||||| ||||| |||||||||||
Sbjct: 397 accagcacgcagcagtccgctcctctgtagaaggc 363
to top
>ref|XM_346351.2| PREDICTED: Rattus norvegicus similar to RAB9B, member RAS oncogene
           family (LOC367915), mRNA
          Length = 888

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 615 cagcacgcagcagtcggctcccctgtagaa 644
           ||||| ||||||||||||||||||||||||
Sbjct: 297 cagcaggcagcagtcggctcccctgtagaa 268
to top
>gb|BC107383.1| Mus musculus RAB9B, member RAS oncogene family, mRNA (cDNA clone
           MGC:130383 IMAGE:40057619), complete cds
          Length = 1707

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 616 agcacgcagcagtcggctcccctgtagaa 644
           |||| ||||||||||||||||||||||||
Sbjct: 488 agcaggcagcagtcggctcccctgtagaa 460
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>ref|NM_176971.1| Mus musculus RAB9B, member RAS oncogene family (Rab9b), mRNA
          Length = 3762

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 616 agcacgcagcagtcggctcccctgtagaa 644
           |||| ||||||||||||||||||||||||
Sbjct: 517 agcaggcagcagtcggctcccctgtagaa 489
to top
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 391    tccttggccgaggtttcaaagtagggaatgtcgcccttggc 431
              |||||||| || ||||||||||| ||||||| |||||||||
Sbjct: 217985 tccttggcagaagtttcaaagtaaggaatgttgcccttggc 218025
to top
>ref|XM_385317.1| Gibberella zeae PH-1 chromosome 3 RAB7_NEUCR Probable Ras-related
           protein Rab7 (FG05141.1) partial mRNA
          Length = 618

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 601 ttgacgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccacgccgagg 657
           |||||||||||||| || |||||||||||||| || | |||||| || || ||||||
Sbjct: 272 ttgacgtcgtagactagaacgcagcagtcggcgcctcggtagaacgcaacaccgagg 216
to top
>ref|XM_567629.1| Cryptococcus neoformans var. neoformans JEC21 RAB small monomeric
           GTPase (CNK00660) partial mRNA
          Length = 964

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 391 tccttggccgaggtttcaaagtagggaatgtcgcccttggc 431
           |||||||| || ||||||||||| ||||||| |||||||||
Sbjct: 491 tccttggcagaagtttcaaagtaaggaatgttgcccttggc 451
to top
>gb|AF079459.1| Drosophila melanogaster small ras-like GTPase (rab7) gene, complete
           cds
          Length = 1862

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 607 tcgtagaccagcacgcagcagtcggctcc 635
           |||||||| ||||||||||||||||||||
Sbjct: 697 tcgtagacaagcacgcagcagtcggctcc 669
to top
>ref|NM_079748.2| Drosophila melanogaster Rab-protein 7 CG5915-RA (Rab7), mRNA
          Length = 1605

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 607 tcgtagaccagcacgcagcagtcggctcc 635
           |||||||| ||||||||||||||||||||
Sbjct: 453 tcgtagacaagcacgcagcagtcggctcc 425
to top
>dbj|AK161867.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
           enriched library, clone:6330500D17 product:RAS-related
           protein RAB-9L, full insert sequence
          Length = 3986

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 616 agcacgcagcagtcggctcccctgtagaa 644
           |||| ||||||||||||||||||||||||
Sbjct: 733 agcaggcagcagtcggctcccctgtagaa 705
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>gb|AY060236.1| Drosophila melanogaster GH03685 full length cDNA
          Length = 1513

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 607 tcgtagaccagcacgcagcagtcggctcc 635
           |||||||| ||||||||||||||||||||
Sbjct: 435 tcgtagacaagcacgcagcagtcggctcc 407
to top
>dbj|AK049693.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length
           enriched library, clone:C530039B21 product:RAS-RELATED
           PROTEIN RAB-9L (RAB9-LIKE PROTEIN) homolog [Homo
           sapiens], full insert sequence
          Length = 3788

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 616 agcacgcagcagtcggctcccctgtagaa 644
           |||| ||||||||||||||||||||||||
Sbjct: 543 agcaggcagcagtcggctcccctgtagaa 515
to top
>dbj|AK034442.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length
           enriched library, clone:9330195C02 product:RAS-RELATED
           PROTEIN RAB-9L (RAB9-LIKE PROTEIN) homolog [Homo
           sapiens], full insert sequence
          Length = 3762

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 616 agcacgcagcagtcggctcccctgtagaa 644
           |||| ||||||||||||||||||||||||
Sbjct: 517 agcaggcagcagtcggctcccctgtagaa 489
to top
>gb|AC007929.8|AC007929 Drosophila melanogaster, chromosome 3R, region 95A-95C, BAC clone
              BACR05C11, complete sequence
          Length = 171376

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 607    tcgtagaccagcacgcagcagtcggctcc 635
              |||||||| ||||||||||||||||||||
Sbjct: 159765 tcgtagacaagcacgcagcagtcggctcc 159737
to top
>gb|AC008202.4|AC008202 Drosophila melanogaster, chromosome 3R, region 95C-95D, BAC clone
             BACR15J11, complete sequence
          Length = 186159

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 607   tcgtagaccagcacgcagcagtcggctcc 635
             |||||||| ||||||||||||||||||||
Sbjct: 62769 tcgtagacaagcacgcagcagtcggctcc 62741
to top
>gb|AF263363.1|AF263363 Drosophila melanogaster small ras-like GTPase RAB7 (Rab7) mRNA,
           complete cds
          Length = 1495

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 607 tcgtagaccagcacgcagcagtcggctcc 635
           |||||||| ||||||||||||||||||||
Sbjct: 435 tcgtagacaagcacgcagcagtcggctcc 407
to top
>gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83 of 118 of the complete
              sequence
          Length = 230236

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 607    tcgtagaccagcacgcagcagtcggctcc 635
              |||||||| ||||||||||||||||||||
Sbjct: 192657 tcgtagacaagcacgcagcagtcggctcc 192629
to top
>dbj|AB035672.1| Drosophila melanogaster mRNA for Rab7 protein, complete cds
          Length = 1593

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 607 tcgtagaccagcacgcagcagtcggctcc 635
           |||||||| ||||||||||||||||||||
Sbjct: 441 tcgtagacaagcacgcagcagtcggctcc 413
to top
>emb|AL672008.8| Mouse DNA sequence from clone RP23-389M3 on chromosome X, complete
             sequence
          Length = 160571

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 616   agcacgcagcagtcggctcccctgtagaa 644
             |||| ||||||||||||||||||||||||
Sbjct: 26052 agcaggcagcagtcggctcccctgtagaa 26080
to top
>ref|XM_526302.1| PREDICTED: Pan troglodytes similar to Ras-related protein Rab-7
           (LOC470919), mRNA
          Length = 624

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 613 accagcacgcagcagtcggctcccctgtagaaggccacgccgag 656
           ||||| ||||||||||| || || |||||||||||||| |||||
Sbjct: 260 accagaacgcagcagtctgcacctctgtagaaggccacaccgag 217
to top
>gb|BC072717.1| Danio rerio zgc:91909, mRNA (cDNA clone MGC:91909 IMAGE:7039965),
           complete cds
          Length = 1235

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 602 tgacgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccacgcc 653
           |||| ||||| |||||||| || ||||| || || |||||||||||||||||
Sbjct: 402 tgacatcgtacaccagcacacaacagtccgcccctctgtagaaggccacgcc 351
to top
>ref|NM_004637.5| Homo sapiens RAB7, member RAS oncogene family (RAB7), mRNA
          Length = 2240

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 613 accagcacgcagcagtcggctcccctgtagaaggccacgccgag 656
           ||||| ||||||||||| || || |||||||||||||| |||||
Sbjct: 492 accagaacgcagcagtctgcacctctgtagaaggccacaccgag 449
to top
>gb|U44104.1|HSU44104 Homo sapiens small GTP binding protein Rab7 mRNA, complete cds
          Length = 624

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 613 accagcacgcagcagtcggctcccctgtagaaggccacgccgag 656
           ||||| ||||||||||| || || |||||||||||||| |||||
Sbjct: 260 accagaacgcagcagtctgcacctctgtagaaggccacaccgag 217
to top
>emb|X93499.1|HSRAB7 H.sapiens mRNA for RAB7 protein
          Length = 2264

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 613 accagcacgcagcagtcggctcccctgtagaaggccacgccgag 656
           ||||| ||||||||||| || || |||||||||||||| |||||
Sbjct: 862 accagaacgcagcagtctgcacctctgtagaaggccacaccgag 819
to top
>gb|BC008721.2| Homo sapiens RAB7, member RAS oncogene family, mRNA (cDNA clone
           MGC:8453 IMAGE:2821435), complete cds
          Length = 1489

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 613 accagcacgcagcagtcggctcccctgtagaaggccacgccgag 656
           ||||| ||||||||||| || || |||||||||||||| |||||
Sbjct: 435 accagaacgcagcagtctgcacctctgtagaaggccacaccgag 392
to top
>emb|CR859246.1| Pongo pygmaeus mRNA; cDNA DKFZp459E131 (from clone DKFZp459E131)
          Length = 2251

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 613 accagcacgcagcagtcggctcccctgtagaaggccacgccgag 656
           ||||| ||||||||||| || || |||||||||||||| |||||
Sbjct: 469 accagaacgcagcagtctgcacctctgtagaaggccacaccgag 426
to top
>gb|AF498942.1| Homo sapiens small GTP binding protein RAB7 (RAB7) mRNA, complete
           cds
          Length = 624

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 613 accagcacgcagcagtcggctcccctgtagaaggccacgccgag 656
           ||||| ||||||||||| || || |||||||||||||| |||||
Sbjct: 260 accagaacgcagcagtctgcacctctgtagaaggccacaccgag 217
to top
>ref|XM_682020.1| PREDICTED: Danio rerio similar to Ras-related protein Rab-7
           (LOC572889), partial mRNA
          Length = 1034

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 602 tgacgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccacgcc 653
           |||| ||||| |||||||| || ||||| || || |||||||||||||||||
Sbjct: 91  tgacatcgtacaccagcacacaacagtccgcccctctgtagaaggccacgcc 40
to top
>ref|NM_001002178.1| Danio rerio zgc:91909 (zgc:91909), mRNA
          Length = 1235

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 602 tgacgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccacgcc 653
           |||| ||||| |||||||| || ||||| || || |||||||||||||||||
Sbjct: 402 tgacatcgtacaccagcacacaacagtccgcccctctgtagaaggccacgcc 351
to top
>gb|AC023598.30| Homo sapiens 3 BAC RP11-221E20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 66685

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 613   accagcacgcagcagtcggctcccctgtagaaggccacgccgag 656
             ||||| ||||||||||| || || |||||||||||||| |||||
Sbjct: 50448 accagaacgcagcagtctgcacctctgtagaaggccacaccgag 50491
to top
>dbj|AK000826.1| Homo sapiens cDNA FLJ20819 fis, clone ADSE00511
          Length = 2190

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 613 accagcacgcagcagtcggctcccctgtagaaggccacgccgag 656
           ||||| ||||||||||| || || |||||||||||||| |||||
Sbjct: 435 accagaacgcagcagtctgcacctctgtagaaggccacaccgag 392
to top
>gb|AF050175.1|AF050175 Homo sapiens Rab7 (Rab7) gene, complete cds
          Length = 624

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 613 accagcacgcagcagtcggctcccctgtagaaggccacgccgag 656
           ||||| ||||||||||| || || |||||||||||||| |||||
Sbjct: 260 accagaacgcagcagtctgcacctctgtagaaggccacaccgag 217
to top
>emb|BX537775.1|HSM805862 Homo sapiens mRNA; cDNA DKFZp779L0164 (from clone DKFZp779L0164);
           complete cds
          Length = 1809

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 613 accagcacgcagcagtcggctcccctgtagaaggccacgccgag 656
           ||||| ||||||||||| || || |||||||||||||| |||||
Sbjct: 208 accagaacgcagcagtctgcacctctgtagaaggccacaccgag 165
to top
>gb|BC013728.1| Homo sapiens RAB7, member RAS oncogene family, mRNA (cDNA clone
           MGC:17256 IMAGE:3882701), complete cds
          Length = 1358

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 613 accagcacgcagcagtcggctcccctgtagaaggccacgccgag 656
           ||||| ||||||||||| || || |||||||||||||| |||||
Sbjct: 275 accagaacgcagcagtctgcacctctgtagaaggccacaccgag 232
to top
>gb|U13170.1|CRU13170 Chlamydomonas reinhardtii YptC5 (yptC5) gene, complete cds
          Length = 2990

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  tccttggccgaggtttcaaagtagggaatgtcgcccttggcgacgcaccagtcctttgct 450
            ||||||||||| || || |||||||| |||  |||||||| | |||||||| |||| || 
Sbjct: 2220 tccttggccgacgtctcgaagtagggtatgctgcccttggaggcgcaccaggccttggcc 2161

                    
Query: 451  ttcttctc 458
            ||||||||
Sbjct: 2160 ttcttctc 2153
to top
>gb|AF050174.1|AF050174 Oryctolagus cuniculus Rab7 (Rab7) mRNA, complete cds
          Length = 624

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 604 acgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccac 650
           |||||| | ||||| ||||||||||| || || ||||||||||||||
Sbjct: 269 acgtcgaataccagaacgcagcagtctgcacctctgtagaaggccac 223
to top
>gb|L29276.1|TOBNTRAI Nicotiana tabacum SR1 Nt-rab7c mRNA, complete cds
          Length = 993

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 436 caccagtcctttgctttcttctcgggaaccactcg 470
           ||||| ||||||||||||||||| | |||||||||
Sbjct: 474 caccactcctttgctttcttctcagaaaccactcg 440
to top
>gb|L14928.1|VIRRAB7P Vigna aconitifolia (Rab7p) mRNA, complete cds
          Length = 1086

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 436 caccagtcctttgctttcttctcgggaaccactcg 470
           ||||| ||||||||||||||||| | |||||||||
Sbjct: 613 caccaatcctttgctttcttctcagaaaccactcg 579
to top
>ref|XM_529084.1| PREDICTED: Pan troglodytes similar to Ras-related protein Rab-9B
           (Rab-9L) (RAB9-like protein) (LOC473711), mRNA
          Length = 855

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 621 gcagcagtcggctcccctgtagaagg 646
           ||||||||| ||||||||||||||||
Sbjct: 498 gcagcagtctgctcccctgtagaagg 473
to top
>gb|AY190723.1| Pagrus major RAP2B-like protein mRNA, complete cds
          Length = 692

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 479 cagagtccagatcgaccttgttcccgacca 508
           |||| ||||| |||||||||||||||||||
Sbjct: 457 cagactccaggtcgaccttgttcccgacca 428
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>ref|XM_589286.2| PREDICTED: Bos taurus similar to olfactory receptor, family 7,
            subfamily A, member 17 (LOC511866), mRNA
          Length = 2018

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 621  gcagcagtcggctcccctgtagaagg 646
            ||||||||| ||||||||||||||||
Sbjct: 1504 gcagcagtctgctcccctgtagaagg 1479
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>ref|XM_867247.1| PREDICTED: Bos taurus similar to Ras-related protein Rab-9B
           (Rab-9L) (RAB9-like protein) (LOC615445), mRNA
          Length = 537

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 621 gcagcagtcggctcccctgtagaagg 646
           ||||||||| ||||||||||||||||
Sbjct: 180 gcagcagtctgctcccctgtagaagg 155
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>ref|NM_016370.1| Homo sapiens RAB9B, member RAS oncogene family (RAB9B), mRNA
          Length = 1049

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 621 gcagcagtcggctcccctgtagaagg 646
           ||||||||| ||||||||||||||||
Sbjct: 534 gcagcagtctgctcccctgtagaagg 509
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>ref|XM_538124.2| PREDICTED: Canis familiaris similar to Ras-related protein Rab-9B
           (Rab-9L) (RAB9-like protein) (LOC481003), mRNA
          Length = 795

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 621 gcagcagtcggctcccctgtagaagg 646
           ||||||||| ||||||||||||||||
Sbjct: 266 gcagcagtctgctcccctgtagaagg 241
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>emb|Z73940.1|LJRAB7A L.japonicus mRNA for small GTP-binding protein, RAB7A
          Length = 930

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 436 caccagtcctttgctttcttctcgggaaccactc 469
           |||||||| |||||||||||||| | ||||||||
Sbjct: 472 caccagtcttttgctttcttctcagaaaccactc 439
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>emb|AL139228.1| Human DNA sequence from clone RP4-540A13 on chromosome Xq22.1-22.3
             Contains the RAB9B gene for RAB9B member RAS oncogene
             family, complete sequence
          Length = 31483

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 621   gcagcagtcggctcccctgtagaagg 646
             ||||||||| ||||||||||||||||
Sbjct: 13194 gcagcagtctgctcccctgtagaagg 13219
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>gb|BC070069.1| Homo sapiens cDNA clone IMAGE:5261286, containing frame-shift
           errors
          Length = 3781

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 621 gcagcagtcggctcccctgtagaagg 646
           ||||||||| ||||||||||||||||
Sbjct: 557 gcagcagtctgctcccctgtagaagg 532
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>emb|CR861121.1| Pongo pygmaeus mRNA; cDNA DKFZp459C0214 (from clone DKFZp459C0214)
          Length = 3037

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 621 gcagcagtcggctcccctgtagaagg 646
           ||||||||| ||||||||||||||||
Sbjct: 499 gcagcagtctgctcccctgtagaagg 474
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>gb|BC093758.1| Homo sapiens RAB9B, member RAS oncogene family, mRNA (cDNA clone
           MGC:120793 IMAGE:7939603), complete cds
          Length = 727

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 621 gcagcagtcggctcccctgtagaagg 646
           ||||||||| ||||||||||||||||
Sbjct: 272 gcagcagtctgctcccctgtagaagg 247
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>gb|BC093756.1| Homo sapiens RAB9B, member RAS oncogene family, mRNA (cDNA clone
           MGC:120791 IMAGE:7939601), complete cds
          Length = 723

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 621 gcagcagtcggctcccctgtagaagg 646
           ||||||||| ||||||||||||||||
Sbjct: 272 gcagcagtctgctcccctgtagaagg 247
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>ref|NM_001003316.1| Canis familiaris RAB7, member RAS oncogene family (RAB7), mRNA
          Length = 811

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 613 accagcacgcagcagtcggctcccctgtagaaggccac 650
           ||||| ||||||||||| || || ||||||||||||||
Sbjct: 279 accagaacgcagcagtctgcacctctgtagaaggccac 242
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>gb|BC041336.1| Homo sapiens cDNA clone IMAGE:5274429, containing frame-shift
           errors
          Length = 3786

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 621 gcagcagtcggctcccctgtagaagg 646
           ||||||||| ||||||||||||||||
Sbjct: 562 gcagcagtctgctcccctgtagaagg 537
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>gb|M35522.1|DOGRAB7A C.familiaris GTP-binding protein (rab7) mRNA, complete cds
          Length = 811

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 613 accagcacgcagcagtcggctcccctgtagaaggccac 650
           ||||| ||||||||||| || || ||||||||||||||
Sbjct: 279 accagaacgcagcagtctgcacctctgtagaaggccac 242
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>dbj|AB036693.1| Homo sapiens mRNA for RAB9-like protein, complete cds
          Length = 1049

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 621 gcagcagtcggctcccctgtagaagg 646
           ||||||||| ||||||||||||||||
Sbjct: 534 gcagcagtctgctcccctgtagaagg 509
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>ref|XM_505628.1| Yarrowia lipolytica CLIB122, YALI0F19602g predicted mRNA
          Length = 618

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 601 ttgacgtcgtagaccagcacgcagcagtcggctcccctgtagaaggcca 649
           ||||| ||||||||||| ||||| |||||||| || | |||||| ||||
Sbjct: 272 ttgacatcgtagaccagaacgcaacagtcggcgcctcggtagaaagcca 224
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>emb|BX294147.1| Pirellula sp. strain 1 complete genome; segment 15/24
          Length = 314450

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 287    tagggccttgttctgcaactg 307
              |||||||||||||||||||||
Sbjct: 249210 tagggccttgttctgcaactg 249190
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>gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, complete genome
          Length = 190289

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 608    cgtagaccagcacgcagcagt 628
              |||||||||||||||||||||
Sbjct: 125366 cgtagaccagcacgcagcagt 125386
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>gb|U86932.1|MCU86932 Molluscum contagiosum virus subtype 1 clone B1-60 homolog of
           vaccinia A2L (B1-60-1) gene, partial cds, homolog of
           vaccinia WR gene (B1-60-2) gene, complete cds, and
           homolog of vaccinia A3L (B1-60-3) gene, partial cds
          Length = 1426

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 608 cgtagaccagcacgcagcagt 628
           |||||||||||||||||||||
Sbjct: 655 cgtagaccagcacgcagcagt 675
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 81/101 (80%)
 Strand = Plus / Plus

                                                                            
Query: 319      atgtcttgatcgtgctcatgctccaaggcaagcttggcgatgcacaggaaagcagtgtcg 378
                ||||| |||||  |||||||||| || |||||||| ||||   ||| ||| ||| |||||
Sbjct: 29724590 atgtcctgatcacgctcatgctctaaagcaagcttagcgacagacaagaacgcactgtcg 29724649

                                                         
Query: 379      acattgcagtcgtccttggccgaggtttcaaagtagggaat 419
                ||||||| ||| || || || || |||||||| || |||||
Sbjct: 29724650 acattgcggtcctcttttgcagaagtttcaaaataaggaat 29724690
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>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1131B07
          Length = 109135

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 81/101 (80%)
 Strand = Plus / Plus

                                                                         
Query: 319   atgtcttgatcgtgctcatgctccaaggcaagcttggcgatgcacaggaaagcagtgtcg 378
             ||||| |||||  |||||||||| || |||||||| ||||   ||| ||| ||| |||||
Sbjct: 54321 atgtcctgatcacgctcatgctctaaagcaagcttagcgacagacaagaacgcactgtcg 54380

                                                      
Query: 379   acattgcagtcgtccttggccgaggtttcaaagtagggaat 419
             ||||||| ||| || || || || |||||||| || |||||
Sbjct: 54381 acattgcggtcctcttttgcagaagtttcaaaataaggaat 54421
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>dbj|AP000711.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-51K10, complete
             sequence
          Length = 111591

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 435   gcaccagtcctttgctttctt 455
             |||||||||||||||||||||
Sbjct: 61432 gcaccagtcctttgctttctt 61452
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>dbj|AP001554.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-35P15, complete
             sequence
          Length = 171747

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 435   gcaccagtcctttgctttctt 455
             |||||||||||||||||||||
Sbjct: 14141 gcaccagtcctttgctttctt 14161
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                
Query: 601     ttgacgtcgtagaccagcacgcagcagtcggctcccctgtagaaggcca 649
               ||||| ||||||||||| ||||| |||||||| || | |||||| ||||
Sbjct: 2609395 ttgacatcgtagaccagaacgcaacagtcggcgcctcggtagaaagcca 2609443
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 333     ctcatgctccaaggcaagct 352
               ||||||||||||||||||||
Sbjct: 4139145 ctcatgctccaaggcaagct 4139164
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>emb|CR698058.1|CNS0G1KM Tetraodon nigroviridis full-length cDNA
          Length = 2015

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 602 tgacgtcgtagaccagcacgcagcagtcggctcccctgtagaaggccacgcc 653
           |||||||| | ||||| ||||||||||| || || | |||||| ||||||||
Sbjct: 531 tgacgtcgaacaccaggacgcagcagtccgccccgcggtagaaagccacgcc 480
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>gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosome 8, complete sequence
          Length = 228750

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    attgaagtagatgtcttgat 328
              ||||||||||||||||||||
Sbjct: 182343 attgaagtagatgtcttgat 182324
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>emb|BX901972.12| Zebrafish DNA sequence from clone DKEY-24H22 in linkage group 1,
             complete sequence
          Length = 212798

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    ggaactgtttacattttatt 80
             ||||||||||||||||||||
Sbjct: 50837 ggaactgtttacattttatt 50818
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>emb|AL390789.13| Human DNA sequence from clone RP11-572N15 on chromosome 6, complete
              sequence
          Length = 147434

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     attttattgcccagctaggg 92
              ||||||||||||||||||||
Sbjct: 111254 attttattgcccagctaggg 111235
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>emb|AL591174.13| Mouse DNA sequence from clone RP23-271B20 on chromosome 11, complete
             sequence
          Length = 205379

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 505   accaaaatgaagggaaactg 524
             ||||||||||||||||||||
Sbjct: 41690 accaaaatgaagggaaactg 41671
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>gb|AF243079.1| Helicobacter sp. cytolethal distending toxin subunit B (cdtB) gene,
           partial cds
          Length = 675

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 ggcgcgacaaatgtagtgcg 206
           ||||||||||||||||||||
Sbjct: 545 ggcgcgacaaatgtagtgcg 526
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 333     ctcatgctccaaggcaagct 352
               ||||||||||||||||||||
Sbjct: 4139254 ctcatgctccaaggcaagct 4139273
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>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0050H14, complete sequence
          Length = 142245

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 333   ctcatgctccaaggcaagct 352
             ||||||||||||||||||||
Sbjct: 39782 ctcatgctccaaggcaagct 39801
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>emb|CR925787.5| Zebrafish DNA sequence from clone DKEYP-110H2 in linkage group 10,
             complete sequence
          Length = 89686

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    ggaactgtttacattttatt 80
             ||||||||||||||||||||
Sbjct: 81366 ggaactgtttacattttatt 81385
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>gb|AC132311.2| Mus musculus BAC clone RP24-297P22 from 8, complete sequence
          Length = 164783

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   attgaagtagatgtcttgat 328
             ||||||||||||||||||||
Sbjct: 57983 attgaagtagatgtcttgat 57964


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,555,388
Number of Sequences: 3902068
Number of extensions: 4555388
Number of successful extensions: 82997
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 82733
Number of HSP's gapped (non-prelim): 271
length of query: 657
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 634
effective length of database: 17,143,297,704
effective search space: 10868850744336
effective search space used: 10868850744336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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