ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags31l13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLPQ1_ARATH (Q9FJ62) Probable glycerophosphoryl diester phosphod... 105 1e-22
2GLPQ2_ARATH (Q9SZ11) Probable glycerophosphoryl diester phosphod... 102 7e-22
3MOSA_MAIZE (P15268) Autonomous transposable element EN-1 mosaic ... 36 0.099
4CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Ca... 32 1.4
5MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated prote... 31 2.4
6MAF_AVIS4 (P23091) Transforming protein Maf 31 2.4
7CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calc... 31 3.2
8QUEA_BACHD (Q9KDI6) S-adenosylmethionine:tRNA ribosyltransferase... 30 4.2
9MECT1_MOUSE (Q68ED7) Mucoepidermoid carcinoma translocated prote... 30 4.2
10MRG15_DROME (Q9Y0I1) Protein MRG15 30 4.2
11CTF1_RAT (Q63086) Cardiotrophin-1 (CT-1) 30 4.2
12CTF1_MOUSE (Q60753) Cardiotrophin-1 (CT-1) 30 4.2
13PO4F2_MOUSE (Q63934) POU domain, class 4, transcription factor 2... 30 5.4
14IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1) 30 7.1
15CY551_CHLVI (P42426) Photosynthetic reaction center cytochrome c... 30 7.1
16CSPG3_RAT (P55067) Neurocan core protein precursor (Chondroitin ... 29 9.3
17VATC_METTH (O27038) V-type ATP synthase subunit C (EC 3.6.3.14) ... 29 9.3

>GLPQ1_ARATH (Q9FJ62) Probable glycerophosphoryl diester phosphodiesterase 1|
           precursor (EC 3.1.4.46)
          Length = 766

 Score =  105 bits (262), Expect = 1e-22
 Identities = 62/128 (48%), Positives = 76/128 (59%), Gaps = 3/128 (2%)
 Frame = -3

Query: 604 LPVYVYLLMNEFLSQPYDFFSDATAQINALVHKGVEGGGVDGLITDFPGTAHRYKLNSCR 425
           LPVYV +  NEF+SQP+DFF+DAT +IN+     V G G++G IT+FP TA RYK NSC 
Sbjct: 618 LPVYVEVFRNEFVSQPWDFFADATVEINS----HVTGAGINGTITEFPLTAARYKRNSCL 673

Query: 424 KMGDKTPYYMLPPQRGGLLGVIPDKXXXXXXXXXXPVLTDSDVAEPPLPPVS---NTTGP 254
              D  P YM+P Q  GLL ++             PV TD+DV EPPLPPVS    TT P
Sbjct: 674 TRKD-VPPYMIPVQPAGLLTIV-SPASLPPAEAPSPVFTDADVTEPPLPPVSARAPTTTP 731

Query: 253 APSHAASR 230
            P     +
Sbjct: 732 GPQSTGEK 739



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>GLPQ2_ARATH (Q9SZ11) Probable glycerophosphoryl diester phosphodiesterase 2|
           precursor (EC 3.1.4.46)
          Length = 759

 Score =  102 bits (255), Expect = 7e-22
 Identities = 62/130 (47%), Positives = 76/130 (58%)
 Frame = -3

Query: 604 LPVYVYLLMNEFLSQPYDFFSDATAQINALVHKGVEGGGVDGLITDFPGTAHRYKLNSCR 425
           LPVYV L  NEFLSQPYDFF+DAT +IN+     + G G++G IT+FP TA RYK N C 
Sbjct: 611 LPVYVELFQNEFLSQPYDFFADATVEINSY----ITGAGINGTITEFPFTAARYKRNLCL 666

Query: 424 KMGDKTPYYMLPPQRGGLLGVIPDKXXXXXXXXXXPVLTDSDVAEPPLPPVSNTTGPAPS 245
              +  P YM P Q G LL ++             PV TD+DV EPPLPPV   T  AP+
Sbjct: 667 GRKETIP-YMAPAQPGALLTLV-SPTAFPPAEAPNPVFTDADVTEPPLPPV---TAKAPT 721

Query: 244 HAASRIRTDA 215
            +     T+A
Sbjct: 722 SSPGTPSTNA 731



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>MOSA_MAIZE (P15268) Autonomous transposable element EN-1 mosaic protein|
           (Suppressor-mutator system protein) (SPM)
          Length = 621

 Score = 35.8 bits (81), Expect = 0.099
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +3

Query: 81  HHPQILVQPNQKEK*IARYIEQVAEKNGPQS 173
           +HP+IL   N  EK +ARYI+ V EKNGP +
Sbjct: 363 NHPEILNDSNATEK-LARYIDNVREKNGPDT 392



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>CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1355

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
 Frame = -2

Query: 437 ELVQEDGGQDALLHAASPARRPP----WGHTG*SSIATSNGPNAGVDGLGRGGAAPSS 276
           E+++E+ G+D L  AAS AR  P     G  G + +  S G  AGV   G GG+  SS
Sbjct: 13  EILEEESGKDVLGSAASGARLSPSRTSEGSAGSAGMGGS-GAGAGVGAGGGGGSGASS 69



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>MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated protein 1|
           (Transducer of regulated cAMP response element-binding
           protein 1) (Transducer of CREB protein 1)
          Length = 634

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 335 SNGPNAGVDGLGRGGAAPSSCEQHHRSGALPRRLQNTHGRRRDAA 201
           +N  + G+ G G+G + P S  QH  +G  P  L +T  RR+ A+
Sbjct: 283 ANLTHLGIGGAGQGMSTPGSSPQHRPAGVSPLSL-STEARRQQAS 326



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>MAF_AVIS4 (P23091) Transforming protein Maf|
          Length = 369

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 23/75 (30%), Positives = 27/75 (36%)
 Frame = -2

Query: 476 HHRFPRDGP*IQTELVQEDGGQDALLHAASPARRPPWGHTG*SSIATSNGPNAGVDGLGR 297
           HH  P  G           GG     H A+P   PP       S A+S+   +G  G G 
Sbjct: 177 HHHHPHHGG---------GGGGGGHPHGAAPGSAPP-------SSASSSAAGSGGGGGGG 220

Query: 296 GGAAPSSCEQHHRSG 252
           GG A      HH  G
Sbjct: 221 GGGAGGLHHPHHGGG 235



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>CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1) (rCAPS)
          Length = 1289

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -2

Query: 437 ELVQEDGGQDALLHAASPAR-RPPWGHTG*SSIATSNGPNAGVDGLGRGGAAPSSCEQHH 261
           E+++E+ G++ L  AAS AR  P   + G +  A   G  AG  G+G GG   S      
Sbjct: 13  EILEEESGKEVLGSAASGARLSPSRTNEGSAGSAGMGGSGAGA-GVGAGGGGGSGASSGG 71

Query: 260 RSGAL 246
            +G L
Sbjct: 72  GAGGL 76



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>QUEA_BACHD (Q9KDI6) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC|
           5.-.-.-) (Queuosine biosynthesis protein queA)
          Length = 347

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 574 EFLSQPYDFFSDATAQINALVHKGVEGGGVDGLITDF 464
           E + Q +D F + +   +  ++ G E  G+DGLIT+F
Sbjct: 261 ETIRQEHDEFVETSGWTSIFIYPGYEFKGIDGLITNF 297



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>MECT1_MOUSE (Q68ED7) Mucoepidermoid carcinoma translocated protein 1 homolog|
          Length = 630

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = -2

Query: 350 SSIATSNGPNAGVDGLGRGGAAPSSCEQHHRSGALPRRLQNTHGRRRDA 204
           SS +T +  + GV G G+G   PSS  QH  +   P  L +T  RR+ A
Sbjct: 274 SSSSTGSLAHLGVGGAGQGMNTPSSSPQHRPAVVSPLSL-STEARRQQA 321



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>MRG15_DROME (Q9Y0I1) Protein MRG15|
          Length = 424

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 16/26 (61%), Positives = 17/26 (65%), Gaps = 4/26 (15%)
 Frame = -3

Query: 313 LTDSDVAEPPLPPVSN----TTGPAP 248
           LT SDVAE PLPP +     TT PAP
Sbjct: 217 LTGSDVAEKPLPPTTTPSTPTTEPAP 242



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>CTF1_RAT (Q63086) Cardiotrophin-1 (CT-1)|
          Length = 203

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
 Frame = -3

Query: 289 PPLPPVSNTTGPAPSHA----ASRIRTDAGVM 206
           PP  P++  +GPAPSHA    + R+R DA  +
Sbjct: 63  PPRLPLAGLSGPAPSHAGLPVSERLRQDAAAL 94



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>CTF1_MOUSE (Q60753) Cardiotrophin-1 (CT-1)|
          Length = 203

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
 Frame = -3

Query: 289 PPLPPVSNTTGPAPSHA----ASRIRTDAGVM 206
           PP  P++  +GPAPSHA    + R+R DA  +
Sbjct: 63  PPRLPLAGLSGPAPSHAGLPVSERLRQDAAAL 94



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>PO4F2_MOUSE (Q63934) POU domain, class 4, transcription factor 2|
           (Brain-specific homeobox/POU domain protein 3B) (Brn-3B)
           (Brn-3.2)
          Length = 411

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = -2

Query: 401 LHAASPARRPPWGHTG*SSIATSNGPNAGVDGLGRGGAAPSSCEQHHRSG 252
           LH+ASP    P   +  S  ++SN    G  G G GG   SS      SG
Sbjct: 29  LHSASPGSSAPAAPSASSPSSSSNAGGGGGGGGGGGGGGRSSSSSSSGSG 78



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>IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1)|
          Length = 1242

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +3

Query: 165  PQSQISREAHSTSSITPASVRILEAAWEGAGPVVLLTGGRGGSATSESV 311
            PQ    R +  T S TP++ R+      GAG  V   GG G S++SE V
Sbjct: 1092 PQGCRRRHSSETFSSTPSATRVGNTVPFGAGAAV--GGGGGSSSSSEDV 1138



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>CY551_CHLVI (P42426) Photosynthetic reaction center cytochrome c-551|
           (Cytochrome c551)
          Length = 206

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
 Frame = -3

Query: 274 VSNTTG--PAPSHAA--SRIRTDAGVMLLVLCASLLI 176
           VS  TG  PAP+H+A  + +R+  G  LL+ CASL+I
Sbjct: 27  VSFLTGYSPAPNHSAILTPLRSFMGWFLLIFCASLII 63



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>CSPG3_RAT (P55067) Neurocan core protein precursor (Chondroitin sulfate|
           proteoglycan 3) (245 kDa early postnatal core
           glycoprotein) [Contains: 150 kDa adult core
           glycoprotein]
          Length = 1257

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 28/101 (27%), Positives = 36/101 (35%)
 Frame = -2

Query: 605 PSSLCLSADERVPFSAV*LLLRCHGTD*CPCAQRCRGRGSGWTHHRFPRDGP*IQTELVQ 426
           PSSL +  +E  P           GT   P     RGR  G     F + GP        
Sbjct: 454 PSSLGVDMEETTP----------SGTQVAPTPTMRRGRFKGLNGRHFQQQGP-------- 495

Query: 425 EDGGQDALLHAASPARRPPWGHTG*SSIATSNGPNAGVDGL 303
               +D LL AA  + +PP         A   GP+A  + L
Sbjct: 496 ----EDQLLEAAEASAQPPTLEV----TADHMGPSAATEAL 528



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>VATC_METTH (O27038) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase|
           subunit C)
          Length = 385

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
 Frame = +3

Query: 129 ARYIEQVAEKNGPQSQISREAHSTSSITPASVRILEAA----WEGAGPVVLLTGGRGGSA 296
           A+YI++   +   +SQ++      S I PAS+R    A    W+      L+T    G +
Sbjct: 92  AKYIDRFPIEKALESQLAETYEMVSQIAPASIRDPFRANLKRWDVRNIKSLITAKAAGLS 151

Query: 297 TSESVN 314
             E+VN
Sbjct: 152 AEETVN 157


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,780,181
Number of Sequences: 219361
Number of extensions: 1836857
Number of successful extensions: 6000
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5993
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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