ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags32a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK102436.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 8e-68
2gb|BT018028.1| Zea mays clone EL01N0529H05.c mRNA sequence 174 2e-40
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
4dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
5gb|AY103770.1| Zea mays PCO100327 mRNA sequence 115 2e-22
6gb|AY107063.1| Zea mays PCO100324 mRNA sequence 103 7e-19
7gb|BT017666.1| Zea mays clone EL01N0441F03.c mRNA sequence 100 1e-17
8gb|AY111471.1| Zea mays CL42025_1 mRNA sequence 64 6e-07
9gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.009
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
11dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
12dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
13dbj|AK073641.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
14dbj|AK063958.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
15ref|XM_480400.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.037
16emb|BX883042.1| Rattus norvegicus chromosome 20, major histocomp... 46 0.15
17dbj|AK062287.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.58
18ref|NM_000436.2| Homo sapiens 3-oxoacid CoA transferase 1 (OXCT1... 42 2.3
19gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
20gb|AC118710.7| Mus musculus chromosome 15, clone RP24-121C9, com... 42 2.3
21gb|BC009001.1| Homo sapiens 3-oxoacid CoA transferase 1, mRNA (c... 42 2.3
22emb|AL512283.12| Human DNA sequence from clone RP11-95G17 on chr... 42 2.3
23emb|CR860738.1| Pongo pygmaeus mRNA; cDNA DKFZp459B1627 (from cl... 42 2.3
24dbj|AB029576.2| Homo sapiens OXCT gene for succinyl-CoA:3-ketoac... 42 2.3
25dbj|AK125115.1| Homo sapiens cDNA FLJ43125 fis, clone CTONG3004397 42 2.3
26emb|CR611841.1| full-length cDNA clone CS0DL007YO17 of B cells (... 42 2.3
27gb|AC008817.8| Homo sapiens chromosome 5 clone CTD-2122P11, comp... 42 2.3
28dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
29gb|AC087902.43| Mus musculus strain C57BL/6J chromosome 15 clone... 42 2.3
30gb|AC011235.4| Homo sapiens BAC clone RP11-295A19 from 2, comple... 42 2.3
31gb|U62961.1|HSU62961 Human succinyl CoA:3-oxoacid CoA transferas... 42 2.3
32gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, comp... 40 9.1
33ref|NM_196521.1| Oryza sativa (japonica cultivar-group) putative... 40 9.1
34gb|AC110214.7| Mus musculus chromosome 8, clone RP24-485L5, comp... 40 9.1
35gb|AY591712.1| Mus musculus clone IgKVk33-84 immunoglobulin kapp... 40 9.1
36gb|AC127189.4| Rattus norvegicus 1 BAC CH230-266M16 (Children's ... 40 9.1
37gb|AC161767.4| Pan troglodytes BAC clone CH251-365K8 from chromo... 40 9.1
38gb|AC147030.3| Pan troglodytes BAC clone RP43-95K17 from 7, comp... 40 9.1
39gb|AC161280.2| Pan troglodytes BAC clone CH251-392H4 from chromo... 40 9.1
40gb|AC123876.5| Mus musculus BAC clone RP23-270P19 from chromosom... 40 9.1
41gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, com... 40 9.1
42gb|AC110554.10| Mus musculus chromosome 8, clone RP23-249H16, co... 40 9.1
43gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, co... 40 9.1
44emb|AL596245.3| Human DNA sequence from clone RP11-573C10 on chr... 40 9.1
45gb|AC104164.2| Homo sapiens chromosome 3 clone RP11-641C17, comp... 40 9.1
46gb|AC073421.8| Homo sapiens BAC clone RP11-525A11 from 7, comple... 40 9.1
47gb|AC118231.9| Mus musculus chromosome 5, clone RP23-462J24, com... 40 9.1
48ref|NM_001027182.1| Caenorhabditis elegans T23B7.2 (T23B7.2) mRN... 40 9.1
49dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
50dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
51gb|AC093381.5| Homo sapiens BAC clone RP11-436J10 from 2, comple... 40 9.1
52dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
53gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb00... 40 9.1
54dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
55gb|AC003991.1|AC003991 Human BAC clone CTB-167B5 from 7q21, comp... 40 9.1
56dbj|AK099316.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.1
57dbj|AK064344.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.1
58gb|AY107569.1| Zea mays PCO122077 mRNA sequence 40 9.1
59gb|AC153614.5| Mus musculus 6 BAC RP23-344N8 (Roswell Park Cance... 40 9.1
60gb|U66722.1|HSU66722 Human chromosome 3p14.2 fragile site FRA3B ... 40 9.1
61gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.1
62emb|AL713863.7| Mouse DNA sequence from clone RP23-330I16 on chr... 40 9.1 
>dbj|AK102436.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093J18, full
           insert sequence
          Length = 1094

 Score =  266 bits (134), Expect = 8e-68
 Identities = 346/416 (83%), Gaps = 3/416 (0%)
 Strand = Plus / Minus

                                                                       
Query: 230 tcttccacctccgtaaagtttttgggataagtgtatgttggatataaggtcttcagaatg 289
           |||||||| |||  |||||||||||||||||| || ||||||||||||||||| | ||||
Sbjct: 879 tcttccacatccacaaagtttttgggataagtataagttggatataaggtctttaaaatg 820

                                                                       
Query: 290 tttatgacatcagaaacttttattcgtactggactgcagatgtaccgtccagatgcctct 349
           ||||| | |||||| ||| ||||| |  |||  ||||||||||| ||||| |||||   |
Sbjct: 819 tttatcatatcagagactcttattggagctgagctgcagatgtatcgtccggatgc---t 763

                                                                       
Query: 350 ggattttcatatgccagaagaagagcatcggcaacatcacggacatccactagattccag 409
           ||||||||||| |||| ||| ||||||| |||||||||||| |||||||||| ||||| |
Sbjct: 762 ggattttcatacgccaaaaggagagcattggcaacatcacgaacatccactacattccgg 703

                                                                       
Query: 410 aatctattttctacagtctcatgttctcctttgagatatttgaggagaattttactgctc 469
           | ||||||||| ||||| ||| | |||||||||| ||| || | ||||| |||||| |||
Sbjct: 702 agtctattttcgacagtgtcacgatctcctttgaaatagttaatgagaactttactactc 643

                                                                       
Query: 470 gcattcactgttggctgcatcaaggggccaagtaccaatgatggtagaatagctacaaca 529
           || || ||||| |  ||||| ||||| ||||  |||||||||||   ||||| |||||  
Sbjct: 642 gcgtttactgtagattgcattaagggtccaatcaccaatgatgggcaaatagttacaatg 583

                                                                       
Query: 530 tccatcccagttttcgctgcataagcaaaagcctcacgctctgcgcgcgttttggaaagc 589
           |||| ||||||||| |||||||||||||||||||||||||||||   |||||| ||||| 
Sbjct: 582 tccagcccagtttttgctgcataagcaaaagcctcacgctctgccaccgttttcgaaagg 523

                                                                   
Query: 590 aaataccaatcctcaccctttctgcacagatcctcgtctgaccagctgtcttcagt 645
            |||||||||||| |  ||||||||| |  ||||| |||||||| |||||||||||
Sbjct: 522 taataccaatcctgattctttctgcataattcctcatctgaccaactgtcttcagt 467



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                       
Query: 122 aggatgccagatgctttgtaggattcgacactgtctccgagggtcttctctacaggcctg 181
           ||||||||| |||||||||||||||| || ||||| | |||||| | ||| | |||||||
Sbjct: 987 aggatgccaaatgctttgtaggattccacgctgtcccggagggtttcctcaataggcctg 928

                                              
Query: 182 aaggtccaccctagcttctgaagtttctcagaact 216
           ||  |||| || |||||||||||||||||| ||||
Sbjct: 927 aaactccagccaagcttctgaagtttctcaaaact 893
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>gb|BT018028.1| Zea mays clone EL01N0529H05.c mRNA sequence
          Length = 1336

 Score =  174 bits (88), Expect = 2e-40
 Identities = 289/356 (81%)
 Strand = Plus / Minus

                                                                       
Query: 248 tttttgggataagtgtatgttggatataaggtcttcagaatgtttatgacatcagaaact 307
           ||||||||||||| ||| | |||||| ||||||||||| |||||||| | ||||| |  |
Sbjct: 877 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcactt 818

                                                                       
Query: 308 tttattcgtactggactgcagatgtaccgtccagatgcctctggattttcatatgccaga 367
           ||||||     || |||||||||||| |||||||| || ||||| ||||| || ||||||
Sbjct: 817 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 758

                                                                       
Query: 368 agaagagcatcggcaacatcacggacatccactagattccagaatctattttctacagtc 427
           |||||||| || ||||||||||| |||||||| | ||| | || | | ||||| ||||||
Sbjct: 757 agaagagcgtcagcaacatcacgaacatccaccatatttctgagtatgttttcaacagtc 698

                                                                       
Query: 428 tcatgttctcctttgagatatttgaggagaattttactgctcgcattcactgttggctgc 487
           ||  | |||||| ||| |||||| ||||  ||||| ||||||| ||| ||||| ||||||
Sbjct: 697 tcgcgatctcctgtgaaatatttaaggatgattttgctgctcgaatttactgtaggctgc 638

                                                                       
Query: 488 atcaaggggccaagtaccaatgatggtagaatagctacaacatccatcccagttttcgct 547
           |||||||| |||| ||| || || ||   ||||| ||||||||||| ||| ||||| |||
Sbjct: 637 atcaagggtccaaatactaacgacgggcaaatagttacaacatccagccctgtttttgct 578

                                                                   
Query: 548 gcataagcaaaagcctcacgctctgcgcgcgttttggaaagcaaataccaatcctc 603
           |||||| |||||||||| || || ||  | || |||||||  ||||||||||||||
Sbjct: 577 gcataaacaaaagcctctcgttccgccagtgtcttggaaacaaaataccaatcctc 522



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 89/106 (83%)
 Strand = Plus / Minus

                                                                        
Query: 108  tggatgctcagttcaggatgccagatgctttgtaggattcgacactgtctccgagggtct 167
            |||||| ||| |||||||||||| ||||||||||  |||| ||| |||| | |||||  |
Sbjct: 1017 tggatgttcaattcaggatgccaaatgctttgtacaattcaacagtgtcgcggagggatt 958

                                                          
Query: 168  tctctacaggcctgaaggtccaccctagcttctgaagtttctcaga 213
             ||||| |||| ||||| ||||||| |||||||| |||||||||||
Sbjct: 957  cctctataggcttgaagctccaccccagcttctgcagtttctcaga 912
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  139 bits (70), Expect = 1e-29
 Identities = 162/192 (84%), Gaps = 3/192 (1%)
 Strand = Plus / Plus

                                                                            
Query: 248      tttttgggataagtgtatgttggatataaggtcttcagaatgtttatgacatcagaaact 307
                |||||||||||||| || ||||||||||||||||| | ||||||||| | |||||| |||
Sbjct: 24690622 tttttgggataagtataagttggatataaggtctttaaaatgtttatcatatcagagact 24690681

                                                                            
Query: 308      tttattcgtactggactgcagatgtaccgtccagatgcctctggattttcatatgccaga 367
                 ||||| |  |||  ||||||||||| ||||| |||||   |||||||||||| |||| |
Sbjct: 24690682 cttattggagctgagctgcagatgtatcgtccggatgc---tggattttcatacgccaaa 24690738

                                                                            
Query: 368      agaagagcatcggcaacatcacggacatccactagattccagaatctattttctacagtc 427
                || ||||||| |||||||||||| |||||||||| ||||| || ||||||||| ||||| 
Sbjct: 24690739 aggagagcattggcaacatcacgaacatccactacattccggagtctattttcgacagtg 24690798

                            
Query: 428      tcatgttctcct 439
                ||| | ||||||
Sbjct: 24690799 tcacgatctcct 24690810



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 137/166 (82%)
 Strand = Plus / Plus

                                                                            
Query: 437      cctttgagatatttgaggagaattttactgctcgcattcactgttggctgcatcaagggg 496
                ||||||| ||| || | ||||| |||||| ||||| || ||||| |  ||||| ||||| 
Sbjct: 24691059 cctttgaaatagttaatgagaactttactactcgcgtttactgtagattgcattaagggt 24691118

                                                                            
Query: 497      ccaagtaccaatgatggtagaatagctacaacatccatcccagttttcgctgcataagca 556
                ||||  |||||||||||   ||||| |||||  |||| ||||||||| ||||||||||||
Sbjct: 24691119 ccaatcaccaatgatgggcaaatagttacaatgtccagcccagtttttgctgcataagca 24691178

                                                              
Query: 557      aaagcctcacgctctgcgcgcgttttggaaagcaaataccaatcct 602
                |||||||||||||||||   |||||| |||||  ||||||||||||
Sbjct: 24691179 aaagcctcacgctctgccaccgttttcgaaaggtaataccaatcct 24691224



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                            
Query: 122      aggatgccagatgctttgtaggattcgacactgtctccgagggtcttctctacaggcctg 181
                ||||||||| |||||||||||||||| || ||||| | |||||| | ||| | |||||||
Sbjct: 24690122 aggatgccaaatgctttgtaggattccacgctgtcccggagggtttcctcaataggcctg 24690181

                                                   
Query: 182      aaggtccaccctagcttctgaagtttctcagaact 216
                ||  |||| || |||||||||||||||||| ||||
Sbjct: 24690182 aaactccagccaagcttctgaagtttctcaaaact 24690216



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 367      aagaagagcatcggcaacatcacggacatccac 399
                ||||||||||||||||||||| | |||||||||
Sbjct: 24704056 aagaagagcatcggcaacatccctgacatccac 24704088



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                    
Query: 462      tactgctcgcattcactgttggctgcatcaaggggccaagtaccaatgatgg 513
                |||||||||||||||| ||||| |||| ||| || ||||  ||||| |||||
Sbjct: 24704492 tactgctcgcattcacagttggttgcagcaaaggtccaatcaccaacgatgg 24704543
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>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0029G06
          Length = 169711

 Score =  139 bits (70), Expect = 1e-29
 Identities = 162/192 (84%), Gaps = 3/192 (1%)
 Strand = Plus / Plus

                                                                         
Query: 248   tttttgggataagtgtatgttggatataaggtcttcagaatgtttatgacatcagaaact 307
             |||||||||||||| || ||||||||||||||||| | ||||||||| | |||||| |||
Sbjct: 24303 tttttgggataagtataagttggatataaggtctttaaaatgtttatcatatcagagact 24362

                                                                         
Query: 308   tttattcgtactggactgcagatgtaccgtccagatgcctctggattttcatatgccaga 367
              ||||| |  |||  ||||||||||| ||||| |||||   |||||||||||| |||| |
Sbjct: 24363 cttattggagctgagctgcagatgtatcgtccggatgc---tggattttcatacgccaaa 24419

                                                                         
Query: 368   agaagagcatcggcaacatcacggacatccactagattccagaatctattttctacagtc 427
             || ||||||| |||||||||||| |||||||||| ||||| || ||||||||| ||||| 
Sbjct: 24420 aggagagcattggcaacatcacgaacatccactacattccggagtctattttcgacagtg 24479

                         
Query: 428   tcatgttctcct 439
             ||| | ||||||
Sbjct: 24480 tcacgatctcct 24491



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 137/166 (82%)
 Strand = Plus / Plus

                                                                         
Query: 437   cctttgagatatttgaggagaattttactgctcgcattcactgttggctgcatcaagggg 496
             ||||||| ||| || | ||||| |||||| ||||| || ||||| |  ||||| ||||| 
Sbjct: 24740 cctttgaaatagttaatgagaactttactactcgcgtttactgtagattgcattaagggt 24799

                                                                         
Query: 497   ccaagtaccaatgatggtagaatagctacaacatccatcccagttttcgctgcataagca 556
             ||||  |||||||||||   ||||| |||||  |||| ||||||||| ||||||||||||
Sbjct: 24800 ccaatcaccaatgatgggcaaatagttacaatgtccagcccagtttttgctgcataagca 24859

                                                           
Query: 557   aaagcctcacgctctgcgcgcgttttggaaagcaaataccaatcct 602
             |||||||||||||||||   |||||| |||||  ||||||||||||
Sbjct: 24860 aaagcctcacgctctgccaccgttttcgaaaggtaataccaatcct 24905



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                         
Query: 122   aggatgccagatgctttgtaggattcgacactgtctccgagggtcttctctacaggcctg 181
             ||||||||| |||||||||||||||| || ||||| | |||||| | ||| | |||||||
Sbjct: 23803 aggatgccaaatgctttgtaggattccacgctgtcccggagggtttcctcaataggcctg 23862

                                                
Query: 182   aaggtccaccctagcttctgaagtttctcagaact 216
             ||  |||| || |||||||||||||||||| ||||
Sbjct: 23863 aaactccagccaagcttctgaagtttctcaaaact 23897



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 367   aagaagagcatcggcaacatcacggacatccac 399
             ||||||||||||||||||||| | |||||||||
Sbjct: 37737 aagaagagcatcggcaacatccctgacatccac 37769



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                 
Query: 462   tactgctcgcattcactgttggctgcatcaaggggccaagtaccaatgatgg 513
             |||||||||||||||| ||||| |||| ||| || ||||  ||||| |||||
Sbjct: 38173 tactgctcgcattcacagttggttgcagcaaaggtccaatcaccaacgatgg 38224
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>gb|AY103770.1| Zea mays PCO100327 mRNA sequence
          Length = 1333

 Score =  115 bits (58), Expect = 2e-22
 Identities = 312/396 (78%), Gaps = 3/396 (0%)
 Strand = Plus / Minus

                                                                       
Query: 248 tttttgggataagtgtatgttggatataaggtcttcagaatgtttatgacatcagaaact 307
           ||||||||||||| ||| |  ||||| | ||||||||| |||||||| | |||||||| |
Sbjct: 948 tttttgggataagggtaagacggatacatggtcttcagtatgtttatcatatcagaaatt 889

                                                                       
Query: 308 tttattcgtactggactgcagatgtaccgtccagatgcctctggattttcatatgccaga 367
           ||||||     || |||||||||||| |||||||| || ||||| ||||| || | ||||
Sbjct: 888 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagtcaga 829

                                                                       
Query: 368 agaagagcatcggcaacatcacggacatccactagattccagaatctattttctacagtc 427
           ||||||||||| ||||||||||| | |||||| | ||| | || |  |||||| ||||||
Sbjct: 828 agaagagcatcagcaacatcacgaatatccaccatattactgagtacattttcaacagtc 769

                                                                       
Query: 428 tcatgttctcctttgagatatttgaggagaattttactgctcgcattcactgttggctgc 487
           ||  | |   |||||| |||||| ||||  ||||  ||||||  ||| ||||| ||||||
Sbjct: 768 tcgagat---ctttgaaatatttaaggatcatttcgctgctcaaatttactgtaggctgc 712

                                                                       
Query: 488 atcaaggggccaagtaccaatgatggtagaatagctacaacatccatcccagttttcgct 547
           |||||||| |||| ||| ||||| ||   || || |||||| |||| ||| ||||| |||
Sbjct: 711 atcaagggtccaaatactaatgacggacaaacagttacaacgtccagccctgtttttgct 652

                                                                       
Query: 548 gcataagcaaaagcctcacgctctgcgcgcgttttggaaagcaaataccaatcctcaccc 607
           ||| |||||| ||| || || || |   | ||||||||||  ||||||||||||||   |
Sbjct: 651 gcaaaagcaagagcttctcgttccgacagtgttttggaaactaaataccaatcctccttc 592

                                               
Query: 608 tttctgcacagatcctcgtctgaccagctgtcttca 643
           || |||||   |||||| |||||||||| |||||||
Sbjct: 591 ttcctgcagtaatcctcatctgaccagcagtcttca 556



 Score =  103 bits (52), Expect = 7e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                        
Query: 102  cctagttggatgctcagttcaggatgccagatgctttgtaggattcgacactgtctccga 161
            |||||||||||| ||| |||||||||||| |||| ||||||||||| ||| |||| | ||
Sbjct: 1094 cctagttggatgttcaattcaggatgccaaatgccttgtaggattcaacagtgtcacgga 1035

                                                                
Query: 162  gggtcttctctacaggcctgaaggtccaccctagcttctgaagtttctcaga 213
            |||  | ||||| |||| ||||||||||||| |||||||| |||||||||||
Sbjct: 1034 gggattcctctataggcttgaaggtccaccccagcttctgcagtttctcaga 983
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>gb|AY107063.1| Zea mays PCO100324 mRNA sequence
          Length = 999

 Score =  103 bits (52), Expect = 7e-19
 Identities = 251/312 (80%), Gaps = 4/312 (1%)
 Strand = Plus / Minus

                                                                       
Query: 323 ctgcagatgtaccgtccagatgcctctggattttcatatgccagaagaagagcatcggca 382
           ||||||||||| ||||||||||| ||| ||||||| || || |||| | ||| ||| |||
Sbjct: 933 ctgcagatgtatcgtccagatgcttcttgattttcgtaagc-agaacaggag-atcagca 876

                                                                       
Query: 383 acatcacggacatccactagattccagaatctattttctacagtctcatgttctcctttg 442
           |||||||| |||||||| | ||| | || ||| ||||| ||||||||| | |||||||||
Sbjct: 875 acatcacgaacatccac-atatttctgagtctgttttcaacagtctcacgatctcctttg 817

                                                                       
Query: 443 agatatttgaggagaattttactgctcgcattcactgttggctgcatcaaggggccaagt 502
           | ||| || ||||| | ||||||| ||| ||| ||| | | |||||||||||| |||| |
Sbjct: 816 aaataattaaggagtactttactgttcgtatttactatagactgcatcaagggcccaaat 757

                                                                       
Query: 503 acc-aatgatggtagaatagctacaacatccatcccagttttcgctgcataagcaaaagc 561
           ||| || || ||   ||||| |||||||| || ||| | ||| |||||| ||||||||||
Sbjct: 756 acccaaggacgggcaaatagttacaacattcagccccgattttgctgcaaaagcaaaagc 697

                                                                       
Query: 562 ctcacgctctgcgcgcgttttggaaagcaaataccaatcctcaccctttctgcacagatc 621
           |||||| || |   | ||||| |||||  ||||||||||||||  ||| |||||   |||
Sbjct: 696 ctcacgttcggatagagttttagaaagataataccaatcctcattcttcctgcaataatc 637

                       
Query: 622 ctcgtctgacca 633
           ||||||||||||
Sbjct: 636 ctcgtctgacca 625
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>gb|BT017666.1| Zea mays clone EL01N0441F03.c mRNA sequence
          Length = 869

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 310/396 (78%), Gaps = 3/396 (0%)
 Strand = Plus / Minus

                                                                       
Query: 248 tttttgggataagtgtatgttggatataaggtcttcagaatgtttatgacatcagaaact 307
           ||||||||||||| ||| |  ||||| | ||||||||| |||||||| | |||||||| |
Sbjct: 468 tttttgggataagggtaagacggatacatggtcttcagtatgtttatcatatcagaaatt 409

                                                                       
Query: 308 tttattcgtactggactgcagatgtaccgtccagatgcctctggattttcatatgccaga 367
           ||||||     || |||||||||||| |||||||| || ||||| ||||| || | ||||
Sbjct: 408 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagtcaga 349

                                                                       
Query: 368 agaagagcatcggcaacatcacggacatccactagattccagaatctattttctacagtc 427
           ||||||||||| ||||||||||| | |||||| | ||| | || |  |||||| ||||||
Sbjct: 348 agaagagcatcagcaacatcacgaatatccaccatattactgagtacattttcaacagtc 289

                                                                       
Query: 428 tcatgttctcctttgagatatttgaggagaattttactgctcgcattcactgttggctgc 487
           ||  | |   |||||| |||||| ||||  ||||  ||||||  ||| ||||| ||||||
Sbjct: 288 tcgagat---ctttgaaatatttaaggatcatttcgctgctcaaatttactgtaggctgc 232

                                                                       
Query: 488 atcaaggggccaagtaccaatgatggtagaatagctacaacatccatcccagttttcgct 547
           |||||||| |||| ||| ||||| ||   || || |||||| |||| ||| ||||| || 
Sbjct: 231 atcaagggtccaaatactaatgacggacaaacagttacaacgtccagccctgtttttgcc 172

                                                                       
Query: 548 gcataagcaaaagcctcacgctctgcgcgcgttttggaaagcaaataccaatcctcaccc 607
            || |||||| ||| || || || |   | ||||||||||  ||||||||||||||   |
Sbjct: 171 ccaaaagcaagagcttctcgttccgacagtgttttggaaactaaataccaatcctccttc 112

                                               
Query: 608 tttctgcacagatcctcgtctgaccagctgtcttca 643
           || |||||   |||||| |||||||||| |||||||
Sbjct: 111 ttcctgcagtaatcctcatctgaccagcagtcttca 76



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 94/112 (83%)
 Strand = Plus / Minus

                                                                       
Query: 102 cctagttggatgctcagttcaggatgccagatgctttgtaggattcgacactgtctccga 161
           |||||||||||| ||| |||||||||||| |||| ||||||||||| ||| || | | ||
Sbjct: 614 cctagttggatgttcaattcaggatgccaaatgccttgtaggattcaacagtggcacgga 555

                                                               
Query: 162 gggtcttctctacaggcctgaaggtccaccctagcttctgaagtttctcaga 213
           |||  | ||||| |||  |||||| |||||| |||||||| |||||||||||
Sbjct: 554 gggattcctctatagggttgaagggccaccccagcttctgcagtttctcaga 503
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>gb|AY111471.1| Zea mays CL42025_1 mRNA sequence
          Length = 830

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 89/108 (82%)
 Strand = Plus / Plus

                                                                       
Query: 497 ccaagtaccaatgatggtagaatagctacaacatccatcccagttttcgctgcataagca 556
           |||| ||||||||||||   ||||| |||||  || | ||||||||| ||||||||||||
Sbjct: 589 ccaattaccaatgatgggcaaatagttacaatgtctagcccagttttggctgcataagca 648

                                                           
Query: 557 aaagcctcacgctctgcgcgcgttttggaaagcaaataccaatcctca 604
           ||||||||| | |||||    ||||| ||||| |||||||| ||||||
Sbjct: 649 aaagcctcatgttctgccaatgttttagaaaggaaataccattcctca 696



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                       
Query: 257 taagtgtatgttggatataaggtcttcagaatgtttatgacatcagaaacttttattcgt 316
           ||||||||||||||||||  ||||||||| |||||||  | |||||| ||| |||||  |
Sbjct: 349 taagtgtatgttggatattcggtcttcagtatgtttacaatatcagagactcttattgct 408

                                                                       
Query: 317 actggactgcagatgtaccgtccagatgcctctggattttcatatgccagaagaagagca 376
             || |||||||| ||| ||||| |||||||   ||||||| || ||||  ||||| |||
Sbjct: 409 ggtgaactgcagaggtatcgtcctgatgcctgcagattttcgtaagccaacagaagggca 468

                                  
Query: 377 tcggcaacatcacggacatccac 399
            | || |||||||| ||||||||
Sbjct: 469 ccagcgacatcacgaacatccac 491



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 79/97 (81%)
 Strand = Plus / Plus

                                                                       
Query: 113 gctcagttcaggatgccagatgctttgtaggattcgacactgtctccgagggtcttctct 172
           |||||||||||||||||    ||| ||||| ||||||  ||||||| |||||| | ||| 
Sbjct: 205 gctcagttcaggatgcccatagctctgtagcattcgatgctgtctcggagggtgtcctcc 264

                                                
Query: 173 acaggcctgaaggtccaccctagcttctgaagtttct 209
           |  |||||  ||||||||||||||||| |||| ||||
Sbjct: 265 atgggcctagaggtccaccctagcttccgaagcttct 301
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>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone
             OSJNBb0052C07, complete sequence
          Length = 154528

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                          
Query: 355   ttcatatgccagaagaagagcatcggcaacatcacggacatccac 399
             ||||||||| ||||| |||||||| || |||||||||||||||||
Sbjct: 24150 ttcatatgc-agaagtagagcatcagcgacatcacggacatccac 24107



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 359   tatgccagaagaagagcatcggcaacatcacggacatc 396
             ||||| ||||| | |||||| |||||||||||||||||
Sbjct: 19433 tatgctagaagtaaagcatcagcaacatcacggacatc 19396



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 374   gcatcggcaacatcacggacatccacta 401
             |||||||| |||||||||||||| ||||
Sbjct: 11214 gcatcggccacatcacggacatcgacta 11187
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 176     ggcctgaaggtccaccctagcttctgaagtttctcagaact 216
               |||||||||||||| |||||||||| ||| ||||| |||||
Sbjct: 4891701 ggcctgaaggtccaacctagcttctcaagcttctctgaact 4891741



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                           
Query: 530     tccatcccagttttcgctgcataagcaaaagcctcacgctctgc 573
               |||||||||||||| || || ||  |||||||||||||||||||
Sbjct: 4892620 tccatcccagtttttgccgcgtactcaaaagcctcacgctctgc 4892663



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                           
Query: 322     actgcagatgtaccgtccagatgcctctggattttcatatgccagaagaagagcatcggc 381
               |||||| ||||| ||| ||||| || |||  ||||||||  | | ||||| |||||||||
Sbjct: 4891960 actgcatatgtatcgttcagatccccctgagttttcatagactaaaagaatagcatcggc 4892019

                                
Query: 382     aacatcacggacatcca 398
               |||||| || |||||||
Sbjct: 4892020 aacatcgcgaacatcca 4892036
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>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1122_A12
          Length = 149011

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 176   ggcctgaaggtccaccctagcttctgaagtttctcagaact 216
             |||||||||||||| |||||||||| ||| ||||| |||||
Sbjct: 50955 ggcctgaaggtccaacctagcttctcaagcttctctgaact 50995



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 530   tccatcccagttttcgctgcataagcaaaagcctcacgctctgc 573
             |||||||||||||| || || ||  |||||||||||||||||||
Sbjct: 51874 tccatcccagtttttgccgcgtactcaaaagcctcacgctctgc 51917



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                         
Query: 322   actgcagatgtaccgtccagatgcctctggattttcatatgccagaagaagagcatcggc 381
             |||||| ||||| ||| ||||| || |||  ||||||||  | | ||||| |||||||||
Sbjct: 51214 actgcatatgtatcgttcagatccccctgagttttcatagactaaaagaatagcatcggc 51273

                              
Query: 382   aacatcacggacatcca 398
             |||||| || |||||||
Sbjct: 51274 aacatcgcgaacatcca 51290
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>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056D04
          Length = 158118

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 176   ggcctgaaggtccaccctagcttctgaagtttctcagaact 216
             |||||||||||||| |||||||||| ||| ||||| |||||
Sbjct: 96495 ggcctgaaggtccaacctagcttctcaagcttctctgaact 96535



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 530   tccatcccagttttcgctgcataagcaaaagcctcacgctctgc 573
             |||||||||||||| || || ||  |||||||||||||||||||
Sbjct: 97414 tccatcccagtttttgccgcgtactcaaaagcctcacgctctgc 97457



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                         
Query: 322   actgcagatgtaccgtccagatgcctctggattttcatatgccagaagaagagcatcggc 381
             |||||| ||||| ||| ||||| || |||  ||||||||  | | ||||| |||||||||
Sbjct: 96754 actgcatatgtatcgttcagatccccctgagttttcatagactaaaagaatagcatcggc 96813

                              
Query: 382   aacatcacggacatcca 398
             |||||| || |||||||
Sbjct: 96814 aacatcgcgaacatcca 96830
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>dbj|AK073641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052J24, full
           insert sequence
          Length = 1232

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 367 aagaagagcatcggcaacatcacggacatccac 399
           ||||||||||||||||||||| | |||||||||
Sbjct: 738 aagaagagcatcggcaacatccctgacatccac 706



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 462 tactgctcgcattcactgttggctgcatcaaggggccaagtaccaatgatgg 513
           |||||||||||||||| ||||| |||| ||| || ||||  ||||| |||||
Sbjct: 646 tactgctcgcattcacagttggttgcagcaaaggtccaatcaccaacgatgg 595
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>dbj|AK063958.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-G03, full
            insert sequence
          Length = 1737

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 367  aagaagagcatcggcaacatcacggacatccac 399
            ||||||||||||||||||||| | |||||||||
Sbjct: 1185 aagaagagcatcggcaacatccctgacatccac 1153



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 462  tactgctcgcattcactgttggctgcatcaaggggccaagtaccaatgatgg 513
            |||||||||||||||| ||||| |||| ||| || ||||  ||||| |||||
Sbjct: 1093 tactgctcgcattcacagttggttgcagcaaaggtccaatcaccaacgatgg 1042
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>ref|XM_480400.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 690

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 530 tccatcccagttttcgctgcataagcaaaagcctcacgctctgc 573
           |||||||||||||| || || ||  |||||||||||||||||||
Sbjct: 590 tccatcccagtttttgccgcgtactcaaaagcctcacgctctgc 547
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>emb|BX883042.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
             assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
             RT1n haplotype; segment 1/11
          Length = 348780

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 335   cgtccagatgcctctggattttc 357
             |||||||||||||||||||||||
Sbjct: 73547 cgtccagatgcctctggattttc 73525
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>dbj|AK062287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-E03, full
           insert sequence
          Length = 1272

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 359 tatgccagaagaagagcatcggcaacatcacggacatc 396
           ||||| ||||| | |||||| |||||||||||||||||
Sbjct: 808 tatgctagaagtaaagcatcagcaacatcacggacatc 771
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>ref|NM_000436.2| Homo sapiens 3-oxoacid CoA transferase 1 (OXCT1), nuclear gene
            encoding mitochondrial protein, mRNA
          Length = 3385

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 92   cattattttccctagttggat 112
            |||||||||||||||||||||
Sbjct: 2700 cattattttccctagttggat 2680
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>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J17,
              complete sequence
          Length = 141598

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 247    gtttttgggataagtgtatgttgga 271
              ||||||||||||||||||| |||||
Sbjct: 103824 gtttttgggataagtgtattttgga 103800
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>gb|AC118710.7| Mus musculus chromosome 15, clone RP24-121C9, complete sequence
          Length = 175437

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 417   tttctacagtctcatgttctc 437
             |||||||||||||||||||||
Sbjct: 53599 tttctacagtctcatgttctc 53619
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>gb|BC009001.1| Homo sapiens 3-oxoacid CoA transferase 1, mRNA (cDNA clone MGC:17088
            IMAGE:4148643), complete cds
          Length = 3296

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 92   cattattttccctagttggat 112
            |||||||||||||||||||||
Sbjct: 2612 cattattttccctagttggat 2592
to top
>emb|AL512283.12| Human DNA sequence from clone RP11-95G17 on chromosome 6 Contains the
              PKIB gene for protein kinase (cAMP-dependent, catalytic)
              inhibitor beta (protein kinase, cAMP-dependent, catalytic,
              inhibitor 2 (PRKACN2)) (similar to FLJ23817). Contains a
              CpG island, complete sequence
          Length = 153677

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 30     atgattgtgtcccagcttatt 50
              |||||||||||||||||||||
Sbjct: 145935 atgattgtgtcccagcttatt 145915
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>emb|CR860738.1| Pongo pygmaeus mRNA; cDNA DKFZp459B1627 (from clone DKFZp459B1627)
          Length = 3419

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 92   cattattttccctagttggat 112
            |||||||||||||||||||||
Sbjct: 2735 cattattttccctagttggat 2715
to top
>dbj|AB029576.2| Homo sapiens OXCT gene for succinyl-CoA:3-ketoacid CoA transferase,
            complete cds
          Length = 7694

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 92   cattattttccctagttggat 112
            |||||||||||||||||||||
Sbjct: 7029 cattattttccctagttggat 7009
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>dbj|AK125115.1| Homo sapiens cDNA FLJ43125 fis, clone CTONG3004397
          Length = 4133

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 92   cattattttccctagttggat 112
            |||||||||||||||||||||
Sbjct: 3464 cattattttccctagttggat 3444
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>emb|CR611841.1| full-length cDNA clone CS0DL007YO17 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1583

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 92  cattattttccctagttggat 112
           |||||||||||||||||||||
Sbjct: 948 cattattttccctagttggat 928
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>gb|AC008817.8| Homo sapiens chromosome 5 clone CTD-2122P11, complete sequence
          Length = 186185

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 92     cattattttccctagttggat 112
              |||||||||||||||||||||
Sbjct: 170725 cattattttccctagttggat 170745
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 247      gtttttgggataagtgtatgttgga 271
                ||||||||||||||||||| |||||
Sbjct: 16463387 gtttttgggataagtgtattttgga 16463363
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>gb|AC087902.43| Mus musculus strain C57BL/6J chromosome 15 clone rp23-343o3, complete
             sequence
          Length = 220173

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 417   tttctacagtctcatgttctc 437
             |||||||||||||||||||||
Sbjct: 32357 tttctacagtctcatgttctc 32337
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>gb|AC011235.4| Homo sapiens BAC clone RP11-295A19 from 2, complete sequence
          Length = 184042

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 197    ttctgaagtttctcagaactc 217
              |||||||||||||||||||||
Sbjct: 162359 ttctgaagtttctcagaactc 162379
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>gb|U62961.1|HSU62961 Human succinyl CoA:3-oxoacid CoA transferase precursor (OXCT) mRNA,
            complete cds
          Length = 3337

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 92   cattattttccctagttggat 112
            |||||||||||||||||||||
Sbjct: 2655 cattattttccctagttggat 2635
to top
>gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, complete sequence
          Length = 163721

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    ttttgggataagtgtatgtt 268
              ||||||||||||||||||||
Sbjct: 121959 ttttgggataagtgtatgtt 121940
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>ref|NM_196521.1| Oryza sativa (japonica cultivar-group) putative polyprotein
           (OSJNBa0006I13.8), mRNA
          Length = 1305

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 219 taactttaccttcttccacc 238
           ||||||||||||||||||||
Sbjct: 463 taactttaccttcttccacc 444
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>gb|AC110214.7| Mus musculus chromosome 8, clone RP24-485L5, complete sequence
          Length = 213387

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    tacaggcctgaaggtccacc 191
              ||||||||||||||||||||
Sbjct: 169542 tacaggcctgaaggtccacc 169561
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>gb|AY591712.1| Mus musculus clone IgKVk33-84 immunoglobulin kappa-like gene, partial
            sequence
          Length = 3001

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    atgtttcttttatttacatgattc 24
            ||||||||||||||| ||||||||
Sbjct: 1081 atgtttcttttatttccatgattc 1058
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>gb|AC127189.4| Rattus norvegicus 1 BAC CH230-266M16 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 222423

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 337   tccagatgcctctggatttt 356
             ||||||||||||||||||||
Sbjct: 45023 tccagatgcctctggatttt 45042
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>gb|AC161767.4| Pan troglodytes BAC clone CH251-365K8 from chromosome 7, complete
             sequence
          Length = 148248

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 218   ataactttaccttcttccacctcc 241
             ||||||||||||| ||||||||||
Sbjct: 26454 ataactttacctttttccacctcc 26431
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>gb|AC147030.3| Pan troglodytes BAC clone RP43-95K17 from 7, complete sequence
          Length = 166955

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     atgtttcttttatttacatgattc 24
             |||||||||||||||| |||||||
Sbjct: 93955 atgtttcttttatttaaatgattc 93932
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>gb|AC161280.2| Pan troglodytes BAC clone CH251-392H4 from chromosome 7, complete
              sequence
          Length = 190939

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 218    ataactttaccttcttccacctcc 241
              ||||||||||||| ||||||||||
Sbjct: 170630 ataactttacctttttccacctcc 170607
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>gb|AC123876.5| Mus musculus BAC clone RP23-270P19 from chromosome 3, complete sequence
          Length = 203639

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 438   ctttgagatatttgaggagaattt 461
             ||||||||||||||||| ||||||
Sbjct: 69006 ctttgagatatttgaggggaattt 68983
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>gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, complete sequence
          Length = 249008

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 590    aaataccaatcctcaccctt 609
              ||||||||||||||||||||
Sbjct: 185895 aaataccaatcctcaccctt 185876
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>gb|AC110554.10| Mus musculus chromosome 8, clone RP23-249H16, complete sequence
          Length = 170361

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    tacaggcctgaaggtccacc 191
              ||||||||||||||||||||
Sbjct: 105663 tacaggcctgaaggtccacc 105644
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>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence
          Length = 215356

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    ttttgggataagtgtatgtt 268
              ||||||||||||||||||||
Sbjct: 139393 ttttgggataagtgtatgtt 139374
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>emb|AL596245.3| Human DNA sequence from clone RP11-573C10 on chromosome X, complete
             sequence
          Length = 175618

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tgtttcttttatttacatga 21
             ||||||||||||||||||||
Sbjct: 96367 tgtttcttttatttacatga 96348
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>gb|AC104164.2| Homo sapiens chromosome 3 clone RP11-641C17, complete sequence
          Length = 197483

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    ttctgaagtttctcagaact 216
              ||||||||||||||||||||
Sbjct: 143657 ttctgaagtttctcagaact 143638
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>gb|AC073421.8| Homo sapiens BAC clone RP11-525A11 from 7, complete sequence
          Length = 98415

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     atgtttcttttatttacatgattc 24
             |||||||||||||||| |||||||
Sbjct: 74712 atgtttcttttatttaaatgattc 74735
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>gb|AC118231.9| Mus musculus chromosome 5, clone RP23-462J24, complete sequence
          Length = 186083

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   tattttctacagtctcatgt 433
             ||||||||||||||||||||
Sbjct: 57250 tattttctacagtctcatgt 57269
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>ref|NM_001027182.1| Caenorhabditis elegans T23B7.2 (T23B7.2) mRNA, complete cds
          Length = 507

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 546 ctgcataagcaaaagcctca 565
           ||||||||||||||||||||
Sbjct: 205 ctgcataagcaaaagcctca 224
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 219      taactttaccttcttccacc 238
                ||||||||||||||||||||
Sbjct: 14219468 taactttaccttcttccacc 14219449
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 519      tagctacaacatccatccca 538
                ||||||||||||||||||||
Sbjct: 33064607 tagctacaacatccatccca 33064588
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>gb|AC093381.5| Homo sapiens BAC clone RP11-436J10 from 2, complete sequence
          Length = 121777

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   tatgttggatataaggtctt 282
             ||||||||||||||||||||
Sbjct: 44536 tatgttggatataaggtctt 44517
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>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1100D10
          Length = 152997

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 519  tagctacaacatccatccca 538
            ||||||||||||||||||||
Sbjct: 1517 tagctacaacatccatccca 1498
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>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10,
             complete sequence
          Length = 142737

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   taactttaccttcttccacc 238
             ||||||||||||||||||||
Sbjct: 91541 taactttaccttcttccacc 91522
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>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0010B10
          Length = 155263

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 519    tagctacaacatccatccca 538
              ||||||||||||||||||||
Sbjct: 130835 tagctacaacatccatccca 130816
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>gb|AC003991.1|AC003991 Human BAC clone CTB-167B5 from 7q21, complete sequence
          Length = 118313

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 218   ataactttaccttcttccacctcc 241
             ||||||||||||| ||||||||||
Sbjct: 83728 ataactttacctttttccacctcc 83705
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>dbj|AK099316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145C18, full
           insert sequence
          Length = 1334

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 219 taactttaccttcttccacc 238
           ||||||||||||||||||||
Sbjct: 544 taactttaccttcttccacc 525
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>dbj|AK064344.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-H09, full
           insert sequence
          Length = 1355

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 219 taactttaccttcttccacc 238
           ||||||||||||||||||||
Sbjct: 559 taactttaccttcttccacc 540
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>gb|AY107569.1| Zea mays PCO122077 mRNA sequence
          Length = 1024

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 120 tcaggatgccagatgctttgtaggattc 147
           ||||||||||| |||| |||||||||||
Sbjct: 37  tcaggatgccaaatgccttgtaggattc 10
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>gb|AC153614.5| Mus musculus 6 BAC RP23-344N8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 205813

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 1      atgtttcttttatttacatgattc 24
              ||||||||||||||| ||||||||
Sbjct: 164738 atgtttcttttatttccatgattc 164761
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>gb|U66722.1|HSU66722 Human chromosome 3p14.2 fragile site FRA3B sequence
          Length = 110434

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   ttctgaagtttctcagaact 216
             ||||||||||||||||||||
Sbjct: 48173 ttctgaagtttctcagaact 48192
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 219      taactttaccttcttccacc 238
                ||||||||||||||||||||
Sbjct: 14227710 taactttaccttcttccacc 14227691
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>emb|AL713863.7| Mouse DNA sequence from clone RP23-330I16 on chromosome X, complete
             sequence
          Length = 203422

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     tttcttttatttacatgatt 23
             ||||||||||||||||||||
Sbjct: 40517 tttcttttatttacatgatt 40498


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,537,508
Number of Sequences: 3902068
Number of extensions: 6537508
Number of successful extensions: 125788
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125428
Number of HSP's gapped (non-prelim): 349
length of query: 663
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 640
effective length of database: 17,143,297,704
effective search space: 10971710530560
effective search space used: 10971710530560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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