ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags32a01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009265.1| Triticum aestivum clone wlk8.pk0001.e10:fis, full insert mRNA sequence Length = 1016 Score = 333 bits (168), Expect = 3e-88 Identities = 186/192 (96%) Strand = Plus / Minus Query: 329 gccctctcgccctcgatctcgcggaacttgtggaggtagtacttaagcggctcgacgtag 388 |||||||||||||||||||||||||||||||||||||||| ||| || || ||||||||| Sbjct: 486 gccctctcgccctcgatctcgcggaacttgtggaggtagtgcttgagggggtcgacgtag 427 Query: 389 tcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggtcttgcgc 448 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 426 tcctcgaagccgagggtggtcatggcccagaggaggtcgtcgccgttgatggtcttgcgc 367 Query: 449 ttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacg 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 ttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacg 307 Query: 509 cactcctgcacc 520 |||||||||||| Sbjct: 306 cactcctgcacc 295 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 188 cccatcatcatcatgcctcccggggc 213 |||||||||||||||||||||||||| Sbjct: 606 cccatcatcatcatgcctcccggggc 581
>ref|XM_468662.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1065 Score = 331 bits (167), Expect = 1e-87 Identities = 182/187 (97%) Strand = Plus / Minus Query: 334 ctcgccctcgatctcgcggaacttgtggaggtagtacttaagcggctcgacgtagtcctc 393 ||||||||||||||||||||||||||||||||||| ||| || || |||||||||||||| Sbjct: 469 ctcgccctcgatctcgcggaacttgtggaggtagtgcttgagggggtcgacgtagtcctc 410 Query: 394 gaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctc 453 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gaagccgagggtggtcatggcccagagcaggtcgtcgccgttgatggtcttgcgcttctc 350 Query: 454 gcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcactc 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 gcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcactc 290 Query: 514 ctgcacc 520 ||||||| Sbjct: 289 ctgcacc 283
>gb|AC120529.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039N21, complete sequence Length = 151732 Score = 331 bits (167), Expect = 1e-87 Identities = 182/187 (97%) Strand = Plus / Minus Query: 334 ctcgccctcgatctcgcggaacttgtggaggtagtacttaagcggctcgacgtagtcctc 393 ||||||||||||||||||||||||||||||||||| ||| || || |||||||||||||| Sbjct: 40993 ctcgccctcgatctcgcggaacttgtggaggtagtgcttgagggggtcgacgtagtcctc 40934 Query: 394 gaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctc 453 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 40933 gaagccgagggtggtcatggcccagagcaggtcgtcgccgttgatggtcttgcgcttctc 40874 Query: 454 gcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcactc 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40873 gcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcactc 40814 Query: 514 ctgcacc 520 ||||||| Sbjct: 40813 ctgcacc 40807
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 331 bits (167), Expect = 1e-87 Identities = 182/187 (97%) Strand = Plus / Minus Query: 334 ctcgccctcgatctcgcggaacttgtggaggtagtacttaagcggctcgacgtagtcctc 393 ||||||||||||||||||||||||||||||||||| ||| || || |||||||||||||| Sbjct: 16897989 ctcgccctcgatctcgcggaacttgtggaggtagtgcttgagggggtcgacgtagtcctc 16897930 Query: 394 gaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctc 453 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 16897929 gaagccgagggtggtcatggcccagagcaggtcgtcgccgttgatggtcttgcgcttctc 16897870 Query: 454 gcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcactc 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16897869 gcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcactc 16897810 Query: 514 ctgcacc 520 ||||||| Sbjct: 16897809 ctgcacc 16897803
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 331 bits (167), Expect = 1e-87 Identities = 182/187 (97%) Strand = Plus / Minus Query: 334 ctcgccctcgatctcgcggaacttgtggaggtagtacttaagcggctcgacgtagtcctc 393 ||||||||||||||||||||||||||||||||||| ||| || || |||||||||||||| Sbjct: 16891562 ctcgccctcgatctcgcggaacttgtggaggtagtgcttgagggggtcgacgtagtcctc 16891503 Query: 394 gaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctc 453 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 16891502 gaagccgagggtggtcatggcccagagcaggtcgtcgccgttgatggtcttgcgcttctc 16891443 Query: 454 gcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcactc 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16891442 gcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcactc 16891383 Query: 514 ctgcacc 520 ||||||| Sbjct: 16891382 ctgcacc 16891376
>dbj|AK060225.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-G06, full insert sequence Length = 1065 Score = 331 bits (167), Expect = 1e-87 Identities = 182/187 (97%) Strand = Plus / Minus Query: 334 ctcgccctcgatctcgcggaacttgtggaggtagtacttaagcggctcgacgtagtcctc 393 ||||||||||||||||||||||||||||||||||| ||| || || |||||||||||||| Sbjct: 469 ctcgccctcgatctcgcggaacttgtggaggtagtgcttgagggggtcgacgtagtcctc 410 Query: 394 gaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctc 453 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gaagccgagggtggtcatggcccagagcaggtcgtcgccgttgatggtcttgcgcttctc 350 Query: 454 gcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcactc 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 gcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcactc 290 Query: 514 ctgcacc 520 ||||||| Sbjct: 289 ctgcacc 283
>gb|AY062181.1| Oryza sativa (indica cultivar-group) HAP3-like transcriptional-activator (HAP3a) mRNA, complete cds Length = 1800 Score = 323 bits (163), Expect = 3e-85 Identities = 181/187 (96%) Strand = Plus / Minus Query: 334 ctcgccctcgatctcgcggaacttgtggaggtagtacttaagcggctcgacgtagtcctc 393 ||||||||||||||||||||||||||||||||||| ||| || || |||||||||||||| Sbjct: 1404 ctcgccctcgatctcgcggaacttgtggaggtagtgcttgagggggtcgacgtagtcctc 1345 Query: 394 gaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctc 453 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1344 gaagccgagggtggtcatggcccagagcaggtcgtcgccgttgatggtcttgcgcttctc 1285 Query: 454 gcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcactc 513 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1284 gcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaattcggagacgcactc 1225 Query: 514 ctgcacc 520 ||||||| Sbjct: 1224 ctgcacc 1218
>gb|BT017830.1| Zea mays clone EL01N0508H10.c mRNA sequence Length = 1002 Score = 315 bits (159), Expect = 8e-83 Identities = 186/195 (95%) Strand = Plus / Minus Query: 326 gccgccctctcgccctcgatctcgcggaacttgtggaggtagtacttaagcggctcgacg 385 |||||| |||||||||||| ||||||||||||||| |||||| ||| |||||||||||| Sbjct: 495 gccgccttctcgccctcgagctcgcggaacttgtgcaggtagagcttgagcggctcgacg 436 Query: 386 tagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggtcttg 445 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 435 tagtcctcgaagccgagcgtggtcatggcccagagcaggtcgtcgccgttgatggtcttg 376 Query: 446 cgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggag 505 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 cgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggac 316 Query: 506 acgcactcctgcacc 520 ||||||||||||||| Sbjct: 315 acgcactcctgcacc 301
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 285 bits (144), Expect = 7e-74 Identities = 177/188 (94%) Strand = Plus / Plus Query: 333 tctcgccctcgatctcgcggaacttgtggaggtagtacttaagcggctcgacgtagtcct 392 |||||||||||| |||||||||||||||||||||| ||| ||||| |||| |||||||| Sbjct: 24867998 tctcgccctcgagctcgcggaacttgtggaggtagagcttgagcgggtcgatgtagtcct 24868057 Query: 393 cgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttct 452 |||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 24868058 cgaagccgagcgtggtcatcgcccagaggaggtcgtcgccgttgatggtcttgcgcttct 24868117 Query: 453 cgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcact 512 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 24868118 cccgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactccgagacgcact 24868177 Query: 513 cctgcacc 520 |||||||| Sbjct: 24868178 cctgcacc 24868185
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 285 bits (144), Expect = 7e-74 Identities = 177/188 (94%) Strand = Plus / Plus Query: 333 tctcgccctcgatctcgcggaacttgtggaggtagtacttaagcggctcgacgtagtcct 392 |||||||||||| |||||||||||||||||||||| ||| ||||| |||| |||||||| Sbjct: 51630 tctcgccctcgagctcgcggaacttgtggaggtagagcttgagcgggtcgatgtagtcct 51689 Query: 393 cgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttct 452 |||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 51690 cgaagccgagcgtggtcatcgcccagaggaggtcgtcgccgttgatggtcttgcgcttct 51749 Query: 453 cgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcact 512 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 51750 cccgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactccgagacgcact 51809 Query: 513 cctgcacc 520 |||||||| Sbjct: 51810 cctgcacc 51817
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 285 bits (144), Expect = 7e-74 Identities = 177/188 (94%) Strand = Plus / Plus Query: 333 tctcgccctcgatctcgcggaacttgtggaggtagtacttaagcggctcgacgtagtcct 392 |||||||||||| |||||||||||||||||||||| ||| ||||| |||| |||||||| Sbjct: 102449 tctcgccctcgagctcgcggaacttgtggaggtagagcttgagcgggtcgatgtagtcct 102508 Query: 393 cgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttct 452 |||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 102509 cgaagccgagcgtggtcatcgcccagaggaggtcgtcgccgttgatggtcttgcgcttct 102568 Query: 453 cgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcact 512 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102569 cccgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactccgagacgcact 102628 Query: 513 cctgcacc 520 |||||||| Sbjct: 102629 cctgcacc 102636
>dbj|AK112118.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-C11, full insert sequence Length = 932 Score = 285 bits (144), Expect = 7e-74 Identities = 177/188 (94%) Strand = Plus / Minus Query: 333 tctcgccctcgatctcgcggaacttgtggaggtagtacttaagcggctcgacgtagtcct 392 |||||||||||| |||||||||||||||||||||| ||| ||||| |||| |||||||| Sbjct: 421 tctcgccctcgagctcgcggaacttgtggaggtagagcttgagcgggtcgatgtagtcct 362 Query: 393 cgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttct 452 |||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 361 cgaagccgagcgtggtcatcgcccagaggaggtcgtcgccgttgatggtcttgcgcttct 302 Query: 453 cgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcact 512 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 301 cccgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactccgagacgcact 242 Query: 513 cctgcacc 520 |||||||| Sbjct: 241 cctgcacc 234
>dbj|AK111621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109P12, full insert sequence Length = 931 Score = 285 bits (144), Expect = 7e-74 Identities = 177/188 (94%) Strand = Plus / Minus Query: 333 tctcgccctcgatctcgcggaacttgtggaggtagtacttaagcggctcgacgtagtcct 392 |||||||||||| |||||||||||||||||||||| ||| ||||| |||| |||||||| Sbjct: 419 tctcgccctcgagctcgcggaacttgtggaggtagagcttgagcgggtcgatgtagtcct 360 Query: 393 cgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttct 452 |||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 359 cgaagccgagcgtggtcatcgcccagaggaggtcgtcgccgttgatggtcttgcgcttct 300 Query: 453 cgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcact 512 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 299 cccgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactccgagacgcact 240 Query: 513 cctgcacc 520 |||||||| Sbjct: 239 cctgcacc 232
>gb|BT009078.1| Triticum aestivum clone wkm1c.pk0002.d7:fis, full insert mRNA sequence Length = 1097 Score = 188 bits (95), Expect = 1e-44 Identities = 131/143 (91%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 ||||||| ||| ||||||||||| || |||| ||| |||||||||||||||||||||||| Sbjct: 465 ggctcgatgtactcctcgaagcccagcgtggccatcgcccagagcaggtcgtcgccgttg 406 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatg 496 ||||||||||||||||| | ||||||||||||| ||||||| |||||||||||||||| Sbjct: 405 atggtcttgcgcttctccctctggcacttgtcgctcgcctcgctggtgatgaaggagatg 346 Query: 497 aactcggagacgcactcctgcac 519 ||||||||||||||||||||||| Sbjct: 345 aactcggagacgcactcctgcac 323
>gb|AY062182.1| Oryza sativa (indica cultivar-group) HAP3-like transcriptional-activator (HAP3b) mRNA, complete cds Length = 1717 Score = 182 bits (92), Expect = 8e-43 Identities = 143/160 (89%) Strand = Plus / Minus Query: 361 gaggtagtacttaagcggctcgacgtagtcctcgaagccgagggtggtcattgcccagag 420 ||||||| |||| ||||| |||||||| ||||||| || || |||||||| |||||||| Sbjct: 1115 gaggtaggacttgagcgggccgacgtaggcctcgaaccccagcgtggtcatggcccagag 1056 Query: 421 caggtcgtcgccgttgatggtcttgcgcttctcgcgctggcacttgtcggaggcctcgcc 480 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1055 gaggtcgtcgccgttgatggtcttccgcttctcgcgctggcacttgtcggaggcctcgcc 996 Query: 481 ggtgatgaaggagatgaactcggagacgcactcctgcacc 520 ||| | |||| ||||||||| || ||||||||||||||| Sbjct: 995 ggtaacgaagctgatgaactccgacacgcactcctgcacc 956
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 361 gaggtagtacttaagcggctcgacgtagtcctcgaagccgagggtggtcattgcccagag 420 ||||||| |||| ||||| |||||||| ||||||| || || |||||||| |||||||| Sbjct: 4327970 gaggtaggacttgagcgggccgacgtaggcctcgaaccccagcgtggtcatggcccagag 4328029 Query: 421 caggtcgtcgccgttgatggtcttgcgcttctcgcgctggcacttgtcggaggcctcgcc 480 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4328030 gaggtcgtcgccgttgatggtcttccgcttctcgcgctggcacttgtcggaggcctcgcc 4328089 Query: 481 ggtgatgaaggagatgaactcggagacgcactcctgcacc 520 || | |||| ||||||||| || ||||||||||||||| Sbjct: 4328090 tgtaacgaagctgatgaactccgacacgcactcctgcacc 4328129
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0054L03 Length = 183623 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 361 gaggtagtacttaagcggctcgacgtagtcctcgaagccgagggtggtcattgcccagag 420 ||||||| |||| ||||| |||||||| ||||||| || || |||||||| |||||||| Sbjct: 90764 gaggtaggacttgagcgggccgacgtaggcctcgaaccccagcgtggtcatggcccagag 90823 Query: 421 caggtcgtcgccgttgatggtcttgcgcttctcgcgctggcacttgtcggaggcctcgcc 480 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 90824 gaggtcgtcgccgttgatggtcttccgcttctcgcgctggcacttgtcggaggcctcgcc 90883 Query: 481 ggtgatgaaggagatgaactcggagacgcactcctgcacc 520 || | |||| ||||||||| || ||||||||||||||| Sbjct: 90884 tgtaacgaagctgatgaactccgacacgcactcctgcacc 90923
>gb|AY224530.1| Oryza sativa (japonica cultivar-group) isolate 21744 CCAAT-binding transcription factor-like protein mRNA, partial cds Length = 459 Score = 165 bits (83), Expect = 2e-37 Identities = 128/143 (89%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 ||||||| ||||||||||||||| || |||| ||| ||||| |||| ||||||||||||| Sbjct: 251 ggctcgatgtagtcctcgaagcccagcgtggccatcgcccacagcaagtcgtcgccgttg 192 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatg 496 ||||||||||||||||| | |||||| || ||| ||||||| |||||||||||||||| Sbjct: 191 atggtcttgcgcttctccctctggcatttatcgctcgcctcgctggtgatgaaggagatg 132 Query: 497 aactcggagacgcactcctgcac 519 ||||||||||||||||||||||| Sbjct: 131 aactcggagacgcactcctgcac 109
>dbj|AB095439.1| Oryza sativa (japonica cultivar-group) OsHAP3B mRNA for HAP3, partial cds Length = 924 Score = 165 bits (83), Expect = 2e-37 Identities = 128/143 (89%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 ||||||| ||||||||||||||| || |||| ||| ||||| |||| ||||||||||||| Sbjct: 297 ggctcgatgtagtcctcgaagcccagcgtggccatcgcccacagcaagtcgtcgccgttg 238 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatg 496 ||||||||||||||||| | |||||| || ||| ||||||| |||||||||||||||| Sbjct: 237 atggtcttgcgcttctccctctggcatttatcgctcgcctcgctggtgatgaaggagatg 178 Query: 497 aactcggagacgcactcctgcac 519 ||||||||||||||||||||||| Sbjct: 177 aactcggagacgcactcctgcac 155
>dbj|AK100811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121O11, full insert sequence Length = 1225 Score = 165 bits (83), Expect = 2e-37 Identities = 128/143 (89%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 ||||||| ||||||||||||||| || |||| ||| ||||| |||| ||||||||||||| Sbjct: 602 ggctcgatgtagtcctcgaagcccagcgtggccatcgcccacagcaagtcgtcgccgttg 543 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatg 496 ||||||||||||||||| | |||||| || ||| ||||||| |||||||||||||||| Sbjct: 542 atggtcttgcgcttctccctctggcatttatcgctcgcctcgctggtgatgaaggagatg 483 Query: 497 aactcggagacgcactcctgcac 519 ||||||||||||||||||||||| Sbjct: 482 aactcggagacgcactcctgcac 460
>gb|BT009393.1| Triticum aestivum clone wlm96.pk037.k9:fis, full insert mRNA sequence Length = 982 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 383 acgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggtc 442 ||||| |||||||| ||||| |||| ||| ||||||||||| ||||| |||||||||||| Sbjct: 405 acgtactcctcgaatccgagcgtggccatggcccagagcagatcgtccccgttgatggtc 346 Query: 443 ttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactcg 502 ||||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||| Sbjct: 345 ttgcgcttctccttctggcacttgtcgctggcctcgctggtgacgaaggagatgaactcg 286 Query: 503 gagacgcactcctg 516 |||||||||||||| Sbjct: 285 gagacgcactcctg 272
>ref|XM_467566.1| Oryza sativa (japonica cultivar-group), mRNA Length = 765 Score = 111 bits (56), Expect = 2e-21 Identities = 119/140 (85%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 |||||||||||||| |||||||||||| | |||| |||||||||| ||| ||| || || Sbjct: 332 ggctcgacgtagtcgtcgaagccgaggcggctcatggcccagagcacgtcctcggcggtg 273 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatg 496 ||||||||||||| ||||||||||||| ||| |||||| |||||||||||| |||| Sbjct: 272 atggtcttgcgctgctcgcgctggcaccgctcgttggcctccccggtgatgaagctgatg 213 Query: 497 aactcggagacgcactcctg 516 |||| || ||||||||||| Sbjct: 212 tactccgacacgcactcctg 193
>gb|AY062184.1| Oryza sativa (indica cultivar-group) HAP3 transcriptional-activator (LEC1B) mRNA, complete cds Length = 1062 Score = 111 bits (56), Expect = 2e-21 Identities = 119/140 (85%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 |||||||||||||| |||||||||||| | |||| |||||||||| ||| ||| || || Sbjct: 397 ggctcgacgtagtcgtcgaagccgaggcggctcatggcccagagcacgtcctcggcggtg 338 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatg 496 ||||||||||||| ||||||||||||| ||| |||||| |||||||||||| |||| Sbjct: 337 atggtcttgcgctgctcgcgctggcaccgctcgttggcctccccggtgatgaagctgatg 278 Query: 497 aactcggagacgcactcctg 516 |||| || ||||||||||| Sbjct: 277 tactccgacacgcactcctg 258
>gb|AY062185.1| Oryza sativa (indica cultivar-group) HAP3 transcriptional-activator (LEC1B) gene, complete cds Length = 2309 Score = 111 bits (56), Expect = 2e-21 Identities = 119/140 (85%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 |||||||||||||| |||||||||||| | |||| |||||||||| ||| ||| || || Sbjct: 1549 ggctcgacgtagtcgtcgaagccgaggcggctcatggcccagagcacgtcctcggcggtg 1490 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatg 496 ||||||||||||| ||||||||||||| ||| |||||| |||||||||||| |||| Sbjct: 1489 atggtcttgcgctgctcgcgctggcaccgctcgttggcctccccggtgatgaagctgatg 1430 Query: 497 aactcggagacgcactcctg 516 |||| || ||||||||||| Sbjct: 1429 tactccgacacgcactcctg 1410
>emb|X59714.1|ZMNFYB Z.mays mRNA for CAAT-box DNA binding protein subunit B (NF-YB) Length = 870 Score = 111 bits (56), Expect = 2e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 404 gtggtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctcgcgctggcac 463 |||| ||| ||||| ||||| |||||||| ||||||||||| |||||||| | ||||||| Sbjct: 330 gtggccatggcccacagcagatcgtcgccattgatggtcttccgcttctccctctggcac 271 Query: 464 ttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcactcctgcac 519 ||||| || |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 270 ttgtcactcgcttcgctagtgatgaaggagatgaactcggagacgcactcctgcac 215
>gb|AY264284.1| Oryza sativa (indica cultivar-group) leafy cotyledon 1 gene, complete cds Length = 765 Score = 111 bits (56), Expect = 2e-21 Identities = 119/140 (85%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 |||||||||||||| |||||||||||| | |||| |||||||||| ||| ||| || || Sbjct: 332 ggctcgacgtagtcgtcgaagccgaggcggctcatggcccagagcacgtcctcggcggtg 273 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatg 496 ||||||||||||| ||||||||||||| ||| |||||| |||||||||||| |||| Sbjct: 272 atggtcttgcgctgctcgcgctggcaccgctcgttggcctccccggtgatgaagctgatg 213 Query: 497 aactcggagacgcactcctg 516 |||| || ||||||||||| Sbjct: 212 tactccgacacgcactcctg 193
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 111 bits (56), Expect = 2e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 |||||||||||||| |||||||||||| | |||| |||||||||| ||| ||| || || Sbjct: 30183538 ggctcgacgtagtcgtcgaagccgaggcggctcatggcccagagcacgtcctcggcggtg 30183597 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatg 496 ||||||||||||| ||||||||||||| ||| |||||| |||||||||||| |||| Sbjct: 30183598 atggtcttgcgctgctcgcgctggcaccgctcgttggcctccccggtgatgaagctgatg 30183657 Query: 497 aactcggagacgcactcctg 516 |||| || ||||||||||| Sbjct: 30183658 tactccgacacgcactcctg 30183677
>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_G07 Length = 93240 Score = 111 bits (56), Expect = 2e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 |||||||||||||| |||||||||||| | |||| |||||||||| ||| ||| || || Sbjct: 56242 ggctcgacgtagtcgtcgaagccgaggcggctcatggcccagagcacgtcctcggcggtg 56301 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatg 496 ||||||||||||| ||||||||||||| ||| |||||| |||||||||||| |||| Sbjct: 56302 atggtcttgcgctgctcgcgctggcaccgctcgttggcctccccggtgatgaagctgatg 56361 Query: 497 aactcggagacgcactcctg 516 |||| || ||||||||||| Sbjct: 56362 tactccgacacgcactcctg 56381
>dbj|AB095440.1| Oryza sativa (japonica cultivar-group) OsHAP3C mRNA for HAP3, complete cds Length = 837 Score = 111 bits (56), Expect = 2e-21 Identities = 119/140 (85%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 |||||||| ||||||||||| ||||| ||| ||||| ||||| ||||||||| || ||| Sbjct: 410 ggctcgacatagtcctcgaatccgagcgtgcccattgaccagatcaggtcgtccccattg 351 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatg 496 ||||||||||||||||| ||||||||||| || |||| |||||||||| |||| Sbjct: 350 atggtcttgcgcttctccttgaggcacttgtcgcttgcttcgctggtgatgaagctgatg 291 Query: 497 aactcggagacgcactcctg 516 |||||||||||||||||||| Sbjct: 290 aactcggagacgcactcctg 271
>dbj|AK107861.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B07, full insert sequence Length = 1078 Score = 111 bits (56), Expect = 2e-21 Identities = 119/140 (85%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 |||||||||||||| |||||||||||| | |||| |||||||||| ||| ||| || || Sbjct: 333 ggctcgacgtagtcgtcgaagccgaggcggctcatggcccagagcacgtcctcggcggtg 274 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatg 496 ||||||||||||| ||||||||||||| ||| |||||| |||||||||||| |||| Sbjct: 273 atggtcttgcgctgctcgcgctggcaccgctcgttggcctccccggtgatgaagctgatg 214 Query: 497 aactcggagacgcactcctg 516 |||| || ||||||||||| Sbjct: 213 tactccgacacgcactcctg 194
>ref|NM_190050.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 534 Score = 109 bits (55), Expect = 9e-21 Identities = 118/139 (84%) Strand = Plus / Minus Query: 380 tcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatg 439 ||||||||||| ||||||||||||| | | |||||| | |||||||||||||| Sbjct: 335 tcgacgtagtcgtcgaagccgagggcgccgaaggcccagcagacgtcgtcgccgttgacc 276 Query: 440 gtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaac 499 |||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 275 gtcttgcgcttctccttgtggcacttgtcggaggcctcgccggtgacgaagctgatgaac 216 Query: 500 tcggagacgcactcctgca 518 || |||||||||||||||| Sbjct: 215 tccgagacgcactcctgca 197
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 109 bits (55), Expect = 9e-21 Identities = 118/139 (84%) Strand = Plus / Plus Query: 380 tcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatg 439 ||||||||||| ||||||||||||| | | |||||| | |||||||||||||| Sbjct: 41021942 tcgacgtagtcgtcgaagccgagggcgccgaaggcccagcagacgtcgtcgccgttgacc 41022001 Query: 440 gtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaac 499 |||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 41022002 gtcttgcgcttctccttgtggcacttgtcggaggcctcgccggtgacgaagctgatgaac 41022061 Query: 500 tcggagacgcactcctgca 518 || |||||||||||||||| Sbjct: 41022062 tccgagacgcactcctgca 41022080 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 475 ctcgccggtgatgaaggagatgaactcggagacgcactcctgca 518 ||||| ||||| ||||||||||||||| |||||||||||||||| Sbjct: 35751509 ctcgctggtgacgaaggagatgaactccgagacgcactcctgca 35751552 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 431 ccgttgatggtcttgcgcttctc 453 ||||||||||||||||||||||| Sbjct: 35751344 ccgttgatggtcttgcgcttctc 35751366
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 109 bits (55), Expect = 9e-21 Identities = 118/139 (84%) Strand = Plus / Plus Query: 380 tcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatg 439 ||||||||||| ||||||||||||| | | |||||| | |||||||||||||| Sbjct: 58872 tcgacgtagtcgtcgaagccgagggcgccgaaggcccagcagacgtcgtcgccgttgacc 58931 Query: 440 gtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaac 499 |||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 58932 gtcttgcgcttctccttgtggcacttgtcggaggcctcgccggtgacgaagctgatgaac 58991 Query: 500 tcggagacgcactcctgca 518 || |||||||||||||||| Sbjct: 58992 tccgagacgcactcctgca 59010
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 109 bits (55), Expect = 9e-21 Identities = 118/139 (84%) Strand = Plus / Plus Query: 380 tcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatg 439 ||||||||||| ||||||||||||| | | |||||| | |||||||||||||| Sbjct: 150367 tcgacgtagtcgtcgaagccgagggcgccgaaggcccagcagacgtcgtcgccgttgacc 150426 Query: 440 gtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaac 499 |||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 150427 gtcttgcgcttctccttgtggcacttgtcggaggcctcgccggtgacgaagctgatgaac 150486 Query: 500 tcggagacgcactcctgca 518 || |||||||||||||||| Sbjct: 150487 tccgagacgcactcctgca 150505
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04, complete sequence Length = 88553 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 ||||||| ||||||||||||||| || |||| ||| ||||| |||| ||||||||||||| Sbjct: 40620 ggctcgatgtagtcctcgaagcccagcgtggccatcgcccacagcaagtcgtcgccgttg 40679 Query: 437 atggtcttgcgcttctcgcgctggca 462 ||||||||||||||||| | |||||| Sbjct: 40680 atggtcttgcgcttctccctctggca 40705 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 475 ctcgccggtgatgaaggagatgaactcggagacgcactcctgcac 519 ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 40870 ctcgctggtgatgaaggagatgaactcggagacgcactcctgcac 40914
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 ||||||| ||||||||||||||| || |||| ||| ||||| |||| ||||||||||||| Sbjct: 22628082 ggctcgatgtagtcctcgaagcccagcgtggccatcgcccacagcaagtcgtcgccgttg 22628141 Query: 437 atggtcttgcgcttctcgcgctggca 462 ||||||||||||||||| | |||||| Sbjct: 22628142 atggtcttgcgcttctccctctggca 22628167 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 |||||||| ||||||||||| ||||| ||| ||||| ||||| ||||||||| || ||| Sbjct: 28352777 ggctcgacatagtcctcgaatccgagcgtgcccattgaccagatcaggtcgtccccattg 28352718 Query: 437 atggtcttgcgcttctc 453 ||||||||||||||||| Sbjct: 28352717 atggtcttgcgcttctc 28352701 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 475 ctcgccggtgatgaaggagatgaactcggagacgcactcctgcac 519 ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 22628332 ctcgctggtgatgaaggagatgaactcggagacgcactcctgcac 22628376 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 475 ctcgccggtgatgaaggagatgaactcggagacgcactcctg 516 ||||| |||||||||| |||||||||||||||||||||||| Sbjct: 28352523 ctcgctggtgatgaagctgatgaactcggagacgcactcctg 28352482
>gb|AF410176.1|AF410176 Zea mays leafy cotyledon1 (Lec1) mRNA, complete cds Length = 1173 Score = 93.7 bits (47), Expect = 5e-16 Identities = 119/143 (83%) Strand = Plus / Minus Query: 374 agcggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccg 433 ||||||||||||||||| |||||||||||| | |||| ||||| |||| ||| ||| || Sbjct: 418 agcggctcgacgtagtcgtcgaagccgaggcggctcatggcccacagcacgtcctcggcg 359 Query: 434 ttgatggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggag 493 ||||||||||||||| ||| ||||||||| ||| |||||| || ||||||||| | Sbjct: 358 gtgatggtcttgcgctgctcccgctggcaccgctcgttggcctcccccgtgatgaagctg 299 Query: 494 atgaactcggagacgcactcctg 516 ||| |||| || ||||||||||| Sbjct: 298 atgtactccgacacgcactcctg 276
>ref|NM_190472.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 431 ccgttgatggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaag 490 ||||||||||||||||||||||| ||| || |||||| ||||||| ||||| |||| Sbjct: 242 ccgttgatggtcttgcgcttctccttctgacatttgtcgctcgcctcgctggtgacgaag 183 Query: 491 gagatgaactcggagacgcactcctgca 518 ||||||||||| |||||||||||||||| Sbjct: 182 gagatgaactccgagacgcactcctgca 155
>gb|AY332466.1| Oryza sativa (japonica cultivar-group) CCAAT-binding protein (CCB1) mRNA, complete cds Length = 804 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 431 ccgttgatggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaag 490 ||||||||||||||||||||||| ||| || |||||| ||||||| ||||| |||| Sbjct: 315 ccgttgatggtcttgcgcttctccttctgacatttgtcgctcgcctcgctggtgacgaag 256 Query: 491 gagatgaactcggagacgcactcctgca 518 ||||||||||| |||||||||||||||| Sbjct: 255 gagatgaactccgagacgcactcctgca 228
>dbj|AB095438.1| Oryza sativa (japonica cultivar-group) OsHAP3A mRNA for HAP3, complete cds Length = 963 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 431 ccgttgatggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaag 490 ||||||||||||||||||||||| ||| || |||||| ||||||| ||||| |||| Sbjct: 346 ccgttgatggtcttgcgcttctccttctgacatttgtcgctcgcctcgctggtgacgaag 287 Query: 491 gagatgaactcggagacgcactcctgca 518 ||||||||||| |||||||||||||||| Sbjct: 286 gagatgaactccgagacgcactcctgca 259
>dbj|AK108142.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-E10, full insert sequence Length = 1082 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 431 ccgttgatggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaag 490 ||||||||||||||||||||||| ||| || |||||| ||||||| ||||| |||| Sbjct: 371 ccgttgatggtcttgcgcttctccttctgacatttgtcgctcgcctcgctggtgacgaag 312 Query: 491 gagatgaactcggagacgcactcctgca 518 ||||||||||| |||||||||||||||| Sbjct: 311 gagatgaactccgagacgcactcctgca 284
>gb|AY112643.1| Zea mays CL691_1 mRNA sequence Length = 1149 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 374 agcggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccg 433 ||||||||||||||||| |||||||||||| | |||| ||||| |||| ||| ||| || Sbjct: 421 agcggctcgacgtagtcgtcgaagccgaggcggctcatggcccacagcacgtcctcggcg 362 Query: 434 ttgatggtcttgcgcttctcgcgctggcac 463 ||||||||||||||| ||| ||||||||| Sbjct: 361 gtgatggtcttgcgctgctcccgctggcac 332
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 |||||||| ||||||||||| ||||| ||| ||||| ||||| ||||||||| || ||| Sbjct: 137019 ggctcgacatagtcctcgaatccgagcgtgcccattgaccagatcaggtcgtccccattg 136960 Query: 437 atggtcttgcgcttctc 453 ||||||||||||||||| Sbjct: 136959 atggtcttgcgcttctc 136943 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 475 ctcgccggtgatgaaggagatgaactcggagacgcactcctg 516 ||||| |||||||||| |||||||||||||||||||||||| Sbjct: 136765 ctcgctggtgatgaagctgatgaactcggagacgcactcctg 136724
>gb|AY062183.1| Oryza sativa HAP3 transcriptional-activator (LEC1A) mRNA, complete cds Length = 1072 Score = 69.9 bits (35), Expect = 8e-09 Identities = 110/135 (81%) Strand = Plus / Minus Query: 382 gacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggt 441 ||||||||| |||||||||||| | ||| ||||||| ||||| ||| || ||| || Sbjct: 342 gacgtagtcgtcgaagccgaggcggtccatggcccagacgaggtcctcggcggtgaccgt 283 Query: 442 cttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactc 501 |||||| | |||||| |||||| |||| |||||||||||||| |||| ||||||||| Sbjct: 282 cttgcggtgctcgcggtggcaccggtcgttggcctcgccggtgacgaagctgatgaactc 223 Query: 502 ggagacgcactcctg 516 || ||||||||||| Sbjct: 222 cgacacgcactcctg 208
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 69.9 bits (35), Expect = 8e-09 Identities = 110/135 (81%) Strand = Plus / Minus Query: 382 gacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggt 441 ||||||||| |||||||||||| | ||| ||||||| ||||| ||| || ||| || Sbjct: 10148976 gacgtagtcgtcgaagccgaggcggtccatggcccagacgaggtcctcggcggtgaccgt 10148917 Query: 442 cttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactc 501 |||||| | |||||| |||||| |||| |||||||||||||| |||| ||||||||| Sbjct: 10148916 cttgcggtgctcgcggtggcaccggtcgttggcctcgccggtgacgaagctgatgaactc 10148857 Query: 502 ggagacgcactcctg 516 || ||||||||||| Sbjct: 10148856 cgacacgcactcctg 10148842
>dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0491D10 Length = 162039 Score = 69.9 bits (35), Expect = 8e-09 Identities = 110/135 (81%) Strand = Plus / Minus Query: 382 gacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggt 441 ||||||||| |||||||||||| | ||| ||||||| ||||| ||| || ||| || Sbjct: 115342 gacgtagtcgtcgaagccgaggcggtccatggcccagacgaggtcctcggcggtgaccgt 115283 Query: 442 cttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactc 501 |||||| | |||||| |||||| |||| |||||||||||||| |||| ||||||||| Sbjct: 115282 cttgcggtgctcgcggtggcaccggtcgttggcctcgccggtgacgaagctgatgaactc 115223 Query: 502 ggagacgcactcctg 516 || ||||||||||| Sbjct: 115222 cgacacgcactcctg 115208
>dbj|AK109660.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-E08, full insert sequence Length = 924 Score = 69.9 bits (35), Expect = 8e-09 Identities = 110/135 (81%) Strand = Plus / Minus Query: 382 gacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggt 441 ||||||||| |||||||||||| | ||| ||||||| ||||| ||| || ||| || Sbjct: 337 gacgtagtcgtcgaagccgaggcggtccatggcccagacgaggtcctcggcggtgaccgt 278 Query: 442 cttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaactc 501 |||||| | |||||| |||||| |||| |||||||||||||| |||| ||||||||| Sbjct: 277 cttgcggtgctcgcggtggcaccggtcgttggcctcgccggtgacgaagctgatgaactc 218 Query: 502 ggagacgcactcctg 516 || ||||||||||| Sbjct: 217 cgacacgcactcctg 203
>gb|AC155343.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH077A05, complete sequence Length = 113253 Score = 69.9 bits (35), Expect = 8e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 404 gtggtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctcgcgctggcac 463 |||||||| |||||||||| ||||| |||||||| ||||| | |||||| ||| ||| Sbjct: 33585 gtggtcatagcccagagcaaatcgtctccgttgatcgtcttcctcttctccttctgacac 33644 Query: 464 ttgtcggaggcctcgccggtgatgaaggagatgaactcggagacgcactcctgca 518 || || || ||||| ||||||| |||| || |||||||||||||||||||||| Sbjct: 33645 ttatccgacgcctctccggtgacgaagcttataaactcggagacgcactcctgca 33699
>gb|AC122165.37| Medicago truncatula clone mth2-32m22, complete sequence Length = 148586 Score = 67.9 bits (34), Expect = 3e-08 Identities = 94/114 (82%) Strand = Plus / Minus Query: 407 gtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctcgcgctggcacttg 466 ||||| ||||| || || |||||||||||||| ||||| || ||||| | ||| ||||| Sbjct: 113285 gtcatcgcccaaagtagatcgtcgccgttgatcgtctttcgtttctctctctgacactta 113226 Query: 467 tcggaggcctcgccggtgatgaaggagatgaactcggagacgcactcctgcacc 520 ||||| || || |||||||||||| ||||||||| || || || ||||||||| Sbjct: 113225 tcggaagcttcaccggtgatgaagctgatgaactccgatacacattcctgcacc 113172
>ref|NM_117534.2| Arabidopsis thaliana transcription factor AT4G14540 mRNA, complete cds Length = 603 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 ||||| ||||||||||| || || || || ||||| ||||| || || ||||| |||||| Sbjct: 346 ggctccacgtagtcctcaaaccctagcgtagtcatcgcccaaagaagatcgtcaccgttg 287 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaa 489 || ||||| | |||||| | ||| |||||||| || ||||| ||||||||||| Sbjct: 286 attgtcttcctcttctctctctgacacttgtcagaagcctcaccggtgatgaa 234
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1 Length = 206606 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 ||||| ||||||||||| || || || || ||||| ||||| || || ||||| |||||| Sbjct: 102962 ggctccacgtagtcctcaaaccctagcgtagtcatcgcccaaagaagatcgtcaccgttg 102903 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaa 489 || ||||| | |||||| | ||| |||||||| || ||||| ||||||||||| Sbjct: 102902 attgtcttcctcttctctctctgacacttgtcagaagcctcaccggtgatgaa 102850
>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39 Length = 197976 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 ||||| ||||||||||| || || || || ||||| ||||| || || ||||| |||||| Sbjct: 48458 ggctccacgtagtcctcaaaccctagcgtagtcatcgcccaaagaagatcgtcaccgttg 48399 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaa 489 || ||||| | |||||| | ||| |||||||| || ||||| ||||||||||| Sbjct: 48398 attgtcttcctcttctctctctgacacttgtcagaagcctcaccggtgatgaa 48346
>gb|AC183495.1| Brassica oleracea Contig A, complete sequence Length = 356505 Score = 65.9 bits (33), Expect = 1e-07 Identities = 117/145 (80%) Strand = Plus / Plus Query: 374 agcggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccg 433 |||||||| ||||| ||||| || || || |||||||| ||||| |||| || |||||| Sbjct: 25644 agcggctcaacgtaatcctcaaaccctagagtggtcatagcccatagcaaatcatcgccg 25703 Query: 434 ttgatggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggag 493 ||||| ||||| | |||||| ||||||||| || || ||||| || |||| |||| Sbjct: 25704 ttgatcgtcttcctcttctccttctggcacttatccgacgcctctcccgtgacgaagctt 25763 Query: 494 atgaactcggagacgcactcctgca 518 || ||||| |||||||||||||||| Sbjct: 25764 ataaactcagagacgcactcctgca 25788
>emb|BX825448.1|CNS0A66J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL37ZH08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 727 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 ||||| ||||||||||| || || || || ||||| ||||| || || ||||| |||||| Sbjct: 197 ggctccacgtagtcctcaaaccctagcgtagtcatcgcccaaagaagatcgtcaccgttg 256 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaa 489 || ||||| | |||||| | ||| |||||||| || ||||| ||||||||||| Sbjct: 257 attgtcttcctcttctctctctgacacttgtcagaagcctcaccggtgatgaa 309
>gb|BT003684.1| Arabidopsis thaliana At4g14540 mRNA, complete cds Length = 486 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 ||||| ||||||||||| || || || || ||||| ||||| || || ||||| |||||| Sbjct: 299 ggctccacgtagtcctcaaaccctagcgtagtcatcgcccaaagaagatcgtcaccgttg 240 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaa 489 || ||||| | |||||| | ||| |||||||| || ||||| ||||||||||| Sbjct: 239 attgtcttcctcttctctctctgacacttgtcagaagcctcaccggtgatgaa 187
>dbj|AK117818.1| Arabidopsis thaliana At4g14540 mRNA for putative CCAAT-binding transcription factor subunit A(CBF-A), complete cds, clone: RAFL18-01-N02 Length = 603 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 377 ggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttg 436 ||||| ||||||||||| || || || || ||||| ||||| || || ||||| |||||| Sbjct: 346 ggctccacgtagtcctcaaaccctagcgtagtcatcgcccaaagaagatcgtcaccgttg 287 Query: 437 atggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaa 489 || ||||| | |||||| | ||| |||||||| || ||||| ||||||||||| Sbjct: 286 attgtcttcctcttctctctctgacacttgtcagaagcctcaccggtgatgaa 234
>gb|AY106957.1| Zea mays PCO065518 mRNA sequence Length = 710 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 386 tagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccgttgatggtcttg 445 |||||||| || || || |||| ||| ||||| |||||||||||||| ||||||||||| Sbjct: 72 tagtcctcaaaccccagcgtggccatggcccacagcaggtcgtcgccattgatggtcttc 13 Query: 446 cgcttctcg 454 ||||||||| Sbjct: 12 cgcttctcg 4
>ref|NM_124138.1| Arabidopsis thaliana transcription factor AT5G47640 mRNA, complete cds Length = 1042 Score = 63.9 bits (32), Expect = 5e-07 Identities = 92/112 (82%) Strand = Plus / Minus Query: 407 gtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctcgcgctggcacttg 466 ||||| |||||||||| ||||| |||||||| ||||| | |||||| ||| ||||| Sbjct: 474 gtcatagcccagagcaaatcgtctccgttgatcgtcttcctcttctccttctgacactta 415 Query: 467 tcggaggcctcgccggtgatgaaggagatgaactcggagacgcactcctgca 518 || || || || ||||||| |||| ||||||||||||||| |||||||||| Sbjct: 414 tcagatgcttctccggtgacgaagctgatgaactcggagacacactcctgca 363
>ref|NM_124139.2| Arabidopsis thaliana hydrolase AT5G47650 mRNA, complete cds Length = 2075 Score = 63.9 bits (32), Expect = 5e-07 Identities = 92/112 (82%) Strand = Plus / Plus Query: 407 gtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctcgcgctggcacttg 466 ||||| |||||||||| ||||| |||||||| ||||| | |||||| ||| ||||| Sbjct: 1602 gtcatagcccagagcaaatcgtctccgttgatcgtcttcctcttctccttctgacactta 1661 Query: 467 tcggaggcctcgccggtgatgaaggagatgaactcggagacgcactcctgca 518 || || || || ||||||| |||| ||||||||||||||| |||||||||| Sbjct: 1662 tcagatgcttctccggtgacgaagctgatgaactcggagacacactcctgca 1713
>emb|Y13724.1|ATHAP3B Arabidopsis thaliana mRNA for Hap3b transcription factor Length = 874 Score = 63.9 bits (32), Expect = 5e-07 Identities = 92/112 (82%) Strand = Plus / Minus Query: 407 gtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctcgcgctggcacttg 466 ||||| |||||||||| ||||| |||||||| ||||| | |||||| ||| ||||| Sbjct: 279 gtcatagcccagagcaaatcgtctccgttgatcgtcttcctcttctccttctgacactta 220 Query: 467 tcggaggcctcgccggtgatgaaggagatgaactcggagacgcactcctgca 518 || || || || ||||||| |||| ||||||||||||||| |||||||||| Sbjct: 219 tcagatgcttctccggtgacgaagctgatgaactcggagacacactcctgca 168
>gb|AY078026.1| Arabidopsis thaliana AT5g47640/MNJ7_23 mRNA, complete cds Length = 573 Score = 63.9 bits (32), Expect = 5e-07 Identities = 92/112 (82%) Strand = Plus / Minus Query: 407 gtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctcgcgctggcacttg 466 ||||| |||||||||| ||||| |||||||| ||||| | |||||| ||| ||||| Sbjct: 287 gtcatagcccagagcaaatcgtctccgttgatcgtcttcctcttctccttctgacactta 228 Query: 467 tcggaggcctcgccggtgatgaaggagatgaactcggagacgcactcctgca 518 || || || || ||||||| |||| ||||||||||||||| |||||||||| Sbjct: 227 tcagatgcttctccggtgacgaagctgatgaactcggagacacactcctgca 176
>gb|AF385744.1|AF385744 Arabidopsis thaliana AT5g47640/MNJ7_23 mRNA, complete cds Length = 1044 Score = 63.9 bits (32), Expect = 5e-07 Identities = 92/112 (82%) Strand = Plus / Minus Query: 407 gtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctcgcgctggcacttg 466 ||||| |||||||||| ||||| |||||||| ||||| | |||||| ||| ||||| Sbjct: 474 gtcatagcccagagcaaatcgtctccgttgatcgtcttcctcttctccttctgacactta 415 Query: 467 tcggaggcctcgccggtgatgaaggagatgaactcggagacgcactcctgca 518 || || || || ||||||| |||| ||||||||||||||| |||||||||| Sbjct: 414 tcagatgcttctccggtgacgaagctgatgaactcggagacacactcctgca 363
>emb|BX830131.1|CNS09ZX7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 976 Score = 63.9 bits (32), Expect = 5e-07 Identities = 92/112 (82%) Strand = Plus / Minus Query: 407 gtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctcgcgctggcacttg 466 ||||| |||||||||| ||||| |||||||| ||||| | |||||| ||| ||||| Sbjct: 454 gtcatagcccagagcaaatcgtctccgttgatcgtcttcctcttctccttctgacactta 395 Query: 467 tcggaggcctcgccggtgatgaaggagatgaactcggagacgcactcctgca 518 || || || || ||||||| |||| ||||||||||||||| |||||||||| Sbjct: 394 tcagatgcttctccggtgacgaagctgatgaactcggagacacactcctgca 343
>emb|BX832820.1|CNS09Z51 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL14ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 911 Score = 63.9 bits (32), Expect = 5e-07 Identities = 92/112 (82%) Strand = Plus / Minus Query: 407 gtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctcgcgctggcacttg 466 ||||| |||||||||| ||||| |||||||| ||||| | |||||| ||| ||||| Sbjct: 454 gtcatagcccagagcaaatcgtctccgttgatcgtcttcctcttctccttctgacactta 395 Query: 467 tcggaggcctcgccggtgatgaaggagatgaactcggagacgcactcctgca 518 || || || || ||||||| |||| ||||||||||||||| |||||||||| Sbjct: 394 tcagatgcttctccggtgacgaagctgatgaactcggagacacactcctgca 343
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 475 ctcgccggtgatgaaggagatgaactcggagacgcactcctgca 518 ||||| ||||| ||||||||||||||| |||||||||||||||| Sbjct: 154846 ctcgctggtgacgaaggagatgaactccgagacgcactcctgca 154889 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 431 ccgttgatggtcttgcgcttctc 453 ||||||||||||||||||||||| Sbjct: 154681 ccgttgatggtcttgcgcttctc 154703
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 475 ctcgccggtgatgaaggagatgaactcggagacgcactcctgca 518 ||||| ||||| ||||||||||||||| |||||||||||||||| Sbjct: 15967 ctcgctggtgacgaaggagatgaactccgagacgcactcctgca 16010 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 431 ccgttgatggtcttgcgcttctc 453 ||||||||||||||||||||||| Sbjct: 15802 ccgttgatggtcttgcgcttctc 15824
>dbj|AB025628.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNJ7 Length = 80117 Score = 63.9 bits (32), Expect = 5e-07 Identities = 92/112 (82%) Strand = Plus / Minus Query: 407 gtcattgcccagagcaggtcgtcgccgttgatggtcttgcgcttctcgcgctggcacttg 466 ||||| |||||||||| ||||| |||||||| ||||| | |||||| ||| ||||| Sbjct: 69643 gtcatagcccagagcaaatcgtctccgttgatcgtcttcctcttctccttctgacactta 69584 Query: 467 tcggaggcctcgccggtgatgaaggagatgaactcggagacgcactcctgca 518 || || || || ||||||| |||| ||||||||||||||| |||||||||| Sbjct: 69583 tcagatgcttctccggtgacgaagctgatgaactcggagacacactcctgca 69532
>ref|XM_745041.1| Aspergillus fumigatus Af293 CCAAT-binding factor complex subunit HapC (Afu1g03840) partial mRNA Length = 672 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 440 gtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaac 499 |||||||| ||||| |||||||||| ||||||||||| | |||||| || ||||||||| Sbjct: 323 gtcttgcgtttctcttgctggcacttttcggaggcctcactggtgataaacgagatgaac 264 Query: 500 tcg 502 ||| Sbjct: 263 tcg 261
>ref|XM_505520.1| Yarrowia lipolytica CLIB122, YALI0F17072g predicted mRNA Length = 585 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 481 ggtgatgaaggagatgaactcggagacgcactcctgca 518 |||||||||||| ||||||||||| ||||||||||||| Sbjct: 186 ggtgatgaaggaaatgaactcggacacgcactcctgca 149
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 481 ggtgatgaaggagatgaactcggagacgcactcctgca 518 |||||||||||| ||||||||||| ||||||||||||| Sbjct: 2292417 ggtgatgaaggaaatgaactcggacacgcactcctgca 2292380
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 419 agcaggtcgtcgccgttgatggtcttgcgcttctcgcgctggcacttgtcggaggcctcg 478 |||| ||| ||||||||||| ||||||||||| |||| | ||| |||| ||||||| Sbjct: 461723 agcacgtcctcgccgttgatcgtcttgcgcttgtcgctcgcgcaacggtcgctggcctcg 461782 Query: 479 ccggtgatgaaggagatgaactcggagacgcactcctgca 518 | ||| | ||| |||||||||||| |||||||||||||| Sbjct: 461783 ctggtcacgaacgagatgaactcgctgacgcactcctgca 461822
>ref|NM_210915.1| Eremothecium gossypii AFR014Cp (AFR014C), mRNA Length = 531 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 419 agcaggtcgtcgccgttgatggtcttgcgcttctcgcgctggcacttgtcggaggcctcg 478 |||| ||| ||||||||||| ||||||||||| |||| | ||| |||| ||||||| Sbjct: 254 agcacgtcctcgccgttgatcgtcttgcgcttgtcgctcgcgcaacggtcgctggcctcg 195 Query: 479 ccggtgatgaaggagatgaactcggagacgcactcctgca 518 | ||| | ||| |||||||||||| |||||||||||||| Sbjct: 194 ctggtcacgaacgagatgaactcgctgacgcactcctgca 155
>ref|XM_317114.2| Anopheles gambiae str. PEST ENSANGP00000019734 (ENSANGG00000017245), mRNA Length = 687 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 482 gtgatgaaggagatgaactcggagacgcactcctg 516 |||||||||||||| |||||||| ||||||||||| Sbjct: 260 gtgatgaaggagataaactcggacacgcactcctg 226
>gb|BT009029.1| Triticum aestivum clone wdk3c.pk023.h15:fis, full insert mRNA sequence Length = 1098 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 472 ggcctcgccggtgatgaaggagatgaactcggagacgcactcctg 516 |||||||||||||| |||| |||||||||||| ||||| ||||| Sbjct: 267 ggcctcgccggtgacgaagctgatgaactcggacacgcattcctg 223
>gb|AY058921.1| Triticum aestivum CCAAT-box binding factor HAP3 B domain mRNA, partial cds Length = 270 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 472 ggcctcgccggtgatgaaggagatgaactcggagacgcactcctg 516 |||||||||||||| |||| |||||||||||| ||||| ||||| Sbjct: 147 ggcctcgccggtgacgaagctgatgaactcggacacgcattcctg 103
>gb|AC009911.11| Drosophila melanogaster clone BACR01N17, complete sequence Length = 170190 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 485 atgaaggagatgaactcggagacgcactcctg 516 |||||||| |||||||||||||| |||||||| Sbjct: 32036 atgaaggatatgaactcggagacacactcctg 32067
>ref|NM_136153.2| Drosophila melanogaster CG10447-RA (CG10447), mRNA Length = 922 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 485 atgaaggagatgaactcggagacgcactcctg 516 |||||||| |||||||||||||| |||||||| Sbjct: 323 atgaaggatatgaactcggagacacactcctg 292
>gb|AY094930.1| Drosophila melanogaster RH50436 full insert cDNA Length = 934 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 485 atgaaggagatgaactcggagacgcactcctg 516 |||||||| |||||||||||||| |||||||| Sbjct: 323 atgaaggatatgaactcggagacacactcctg 292
>gb|AY070968.1| Drosophila melanogaster RE06807 full length cDNA Length = 778 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 485 atgaaggagatgaactcggagacgcactcctg 516 |||||||| |||||||||||||| |||||||| Sbjct: 300 atgaaggatatgaactcggagacacactcctg 269
>gb|AY257480.1| Aspergillus niger CCAAT binding protein HAPC mRNA, complete cds Length = 657 Score = 48.1 bits (24), Expect = 0.029 Identities = 54/64 (84%) Strand = Plus / Minus Query: 439 ggtcttgcgcttctcgcgctggcacttgtcggaggcctcgccggtgatgaaggagatgaa 498 |||||||||||| || ||||||| || |||||||| |||| |||||||| ||||| || Sbjct: 306 ggtcttgcgcttttcttgctggcatttctcggaggcttcgctagtgatgaatgagataaa 247 Query: 499 ctcg 502 |||| Sbjct: 246 ctcg 243
>gb|AE003664.3| Drosophila melanogaster chromosome 2L, section 73 of 83 of the complete sequence Length = 266287 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 485 atgaaggagatgaactcggagacgcactcctg 516 |||||||| |||||||||||||| |||||||| Sbjct: 4412 atgaaggatatgaactcggagacacactcctg 4381
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 gaaggcccatcatcatcatgc 203 ||||||||||||||||||||| Sbjct: 920399 gaaggcccatcatcatcatgc 920379
>gb|AC164700.3| Mus musculus BAC clone RP24-548M16 from chromosome 5, complete sequence Length = 212172 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 16 tgtgtatcacctcgtagcaacaatatcta 44 |||||||||||| ||| |||||||||||| Sbjct: 151078 tgtgtatcaccttgtaccaacaatatcta 151106
>ref|XM_757292.1| Ustilago maydis 521 hypothetical protein (UM06238.1) partial mRNA Length = 1983 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 gtcgtcgccgttgatggtctt 444 ||||||||||||||||||||| Sbjct: 1725 gtcgtcgccgttgatggtctt 1705
>ref|XM_387306.1| Gibberella zeae PH-1 chromosome 4 predicted protein (FG07130.1) partial mRNA Length = 639 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 ctcgacgtagtcctcgaagcc 399 ||||||||||||||||||||| Sbjct: 534 ctcgacgtagtcctcgaagcc 514
>gb|AC058788.89| Mus musculus strain C57BL/6J clone rp23-284a9 map 5, complete sequence Length = 200015 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 16 tgtgtatcacctcgtagcaacaatatcta 44 |||||||||||| ||| |||||||||||| Sbjct: 77639 tgtgtatcaccttgtaccaacaatatcta 77667
>gb|AE009542.1| Brucella melitensis 16M chromosome I, section 99 of 195 of the complete sequence Length = 10972 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 gaaggcccatcatcatcatgc 203 ||||||||||||||||||||| Sbjct: 9207 gaaggcccatcatcatcatgc 9227
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 gaaggcccatcatcatcatgc 203 ||||||||||||||||||||| Sbjct: 941984 gaaggcccatcatcatcatgc 941964
>dbj|AB114903.1| Mus musculus Lmbr1 gene for LMBR1L, partial cds Length = 104485 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 16 tgtgtatcacctcgtagcaacaatatcta 44 |||||||||||| ||| |||||||||||| Sbjct: 1695 tgtgtatcaccttgtaccaacaatatcta 1723
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 gaaggcccatcatcatcatgc 203 ||||||||||||||||||||| Sbjct: 939105 gaaggcccatcatcatcatgc 939085
>gb|AC171500.2| Mus musculus BAC clone RP24-67A10 from chromosome 5, complete sequence Length = 185497 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 16 tgtgtatcacctcgtagcaacaatatcta 44 |||||||||||| ||| |||||||||||| Sbjct: 134876 tgtgtatcaccttgtaccaacaatatcta 134848
>ref|NM_031371.2| Homo sapiens AT rich interactive domain 4B (RBP1- like) (ARID4B), transcript variant 2, mRNA Length = 5807 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctttgcatggaaaacagtag 67 |||||||||||||||||||| Sbjct: 2762 ctttgcatggaaaacagtag 2781
>ref|NM_016374.4| Homo sapiens AT rich interactive domain 4B (RBP1- like) (ARID4B), transcript variant 1, mRNA Length = 6065 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctttgcatggaaaacagtag 67 |||||||||||||||||||| Sbjct: 3020 ctttgcatggaaaacagtag 3039
>ref|XM_514285.1| PREDICTED: Pan troglodytes similar to AT rich interactive domain 4B (RBP1- like) isoform 1; Rb-binding protein homolog; retinoblastoma-binding protein 1-like 1; RBP1-like protein; retinoblastoma binding protein 1-like 1; breast carcinoma-associated antigen BCAA; breast cance... (LOC457835), mRNA Length = 3117 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctttgcatggaaaacagtag 67 |||||||||||||||||||| Sbjct: 2299 ctttgcatggaaaacagtag 2318
>gb|AC113444.9| Mus musculus chromosome 15, clone RP23-268C9, complete sequence Length = 189539 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gcctaagggatccggggaag 127 |||||||||||||||||||| Sbjct: 24972 gcctaagggatccggggaag 24953
>gb|AF208045.2| Homo sapiens breast cancer-associated antigen BRCAA1 (BRCAA1) mRNA, complete cds Length = 5393 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctttgcatggaaaacagtag 67 |||||||||||||||||||| Sbjct: 2355 ctttgcatggaaaacagtag 2374
>gb|BC025106.1| Mus musculus ankyrin repeat and SOCS box-containing protein 8, mRNA (cDNA clone MGC:36839 IMAGE:4194829), complete cds Length = 2107 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gcctaagggatccggggaag 127 |||||||||||||||||||| Sbjct: 1195 gcctaagggatccggggaag 1176
>ref|NM_030121.2| Mus musculus ankyrin repeat and SOCS box-containing protein 8 (Asb8), mRNA Length = 2109 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gcctaagggatccggggaag 127 |||||||||||||||||||| Sbjct: 1214 gcctaagggatccggggaag 1195
>gb|AC131786.3| Mus musculus BAC clone RP24-397H7 from chromosome 5, complete sequence Length = 176338 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 gctctgctcaagctctgaacactc 152 |||||||||||||| ||||||||| Sbjct: 35134 gctctgctcaagctttgaacactc 35111
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gcatctcgggcaggtgcggc 289 |||||||||||||||||||| Sbjct: 3466030 gcatctcgggcaggtgcggc 3466049
>emb|AL133418.4| Human DNA sequence from clone RP5-835G14 on chromosome 1q42.1-43 Contains the 3' end of a novel gene (KIAA0117), the 3' end of the ARID4B gene for AT rich interactive domain 4B (RBP1- like), a novel gene and a CpG island, complete sequence Length = 77585 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ctttgcatggaaaacagtag 67 |||||||||||||||||||| Sbjct: 40024 ctttgcatggaaaacagtag 40005
>emb|X59712.1|PMNFYB P.marinus mRNA for CAAT-box DNA binding protein subunit B (NF-YB) Length = 699 Score = 40.1 bits (20), Expect = 7.0 Identities = 65/80 (81%) Strand = Plus / Minus Query: 374 agcggctcgacgtagtcctcgaagccgagggtggtcattgcccagagcaggtcgtcgccg 433 ||||||||||||||| |||||||| ||||||| ||| || |||| | ||| || || Sbjct: 443 agcggctcgacgtagctgtcgaagccaagggtggacatggcgaagaggatgtcctcccca 384 Query: 434 ttgatggtcttgcgcttctc 453 ||||| |||||||| ||||| Sbjct: 383 ttgatcgtcttgcgtttctc 364
>emb|BX648820.1|HSM808971 Homo sapiens mRNA; cDNA DKFZp313M2420 (from clone DKFZp313M2420) Length = 3824 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctttgcatggaaaacagtag 67 |||||||||||||||||||| Sbjct: 2746 ctttgcatggaaaacagtag 2765
>emb|AJ489457.1|BOR489457 Bixa orellana partial mRNA for leafy cotyledon protein (lec gene) Length = 276 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 tcgacgtagtcctcgaagccgagg 403 ||||||||||| |||||||||||| Sbjct: 236 tcgacgtagtcgtcgaagccgagg 213
>gb|AE011931.1| Xanthomonas axonopodis pv. citri str. 306, section 309 of 469 of the complete genome Length = 8467 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gcatctcgggcaggtgcggc 289 |||||||||||||||||||| Sbjct: 1198 gcatctcgggcaggtgcggc 1217
>dbj|AK023144.1| Homo sapiens cDNA FLJ13082 fis, clone NT2RP3002056, weakly similar to RETINOBLASTOMA BINDING PROTEIN 1 Length = 3081 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctttgcatggaaaacagtag 67 |||||||||||||||||||| Sbjct: 74 ctttgcatggaaaacagtag 93
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ttgttgctccttggcatctc 276 |||||||||||||||||||| Sbjct: 1333338 ttgttgctccttggcatctc 1333357
>dbj|AP008980.1| Terrabacter sp. DBF63 plasmid pDBF1 genes, complete and partial cds Length = 70631 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 cggaggcctcgccggtgatg 487 |||||||||||||||||||| Sbjct: 2835 cggaggcctcgccggtgatg 2816
>gb|AF214114.2| Homo sapiens retinoblastoma-binding protein 1-like 1 (RBBP1L1) mRNA, complete cds Length = 5804 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctttgcatggaaaacagtag 67 |||||||||||||||||||| Sbjct: 2760 ctttgcatggaaaacagtag 2779
>gb|AC093829.2| Homo sapiens BAC clone RP11-401E5 from 4, complete sequence Length = 169483 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aatatctagatctttgcatg 56 |||||||||||||||||||| Sbjct: 150569 aatatctagatctttgcatg 150550
>gb|AY220790.1| Homo sapiens SIN3A-associated protein 180 mRNA, complete cds Length = 3939 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctttgcatggaaaacagtag 67 |||||||||||||||||||| Sbjct: 2554 ctttgcatggaaaacagtag 2573
>dbj|AK030168.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933408C09 product:ankyrin repeat and SOCS box-containing protein 8, full insert sequence Length = 2109 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gcctaagggatccggggaag 127 |||||||||||||||||||| Sbjct: 1214 gcctaagggatccggggaag 1195
>dbj|AB210032.1| Homo sapiens mRNA for ARID4B variant protein, partial cds, clone: hh11923 Length = 5544 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctttgcatggaaaacagtag 67 |||||||||||||||||||| Sbjct: 2931 ctttgcatggaaaacagtag 2950
>gb|AY142134.1| Giardia intestinalis isolate WB clone 1267 variant-specific surface protein AS5 gene, complete cds Length = 2860 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 ttgtcggaggcctcgccggt 483 |||||||||||||||||||| Sbjct: 2252 ttgtcggaggcctcgccggt 2271
>gb|AF227899.1|AF227899 Homo sapiens breast carcinoma-associated antigen isoform I mRNA, partial cds Length = 4254 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctttgcatggaaaacagtag 67 |||||||||||||||||||| Sbjct: 1237 ctttgcatggaaaacagtag 1256
>gb|AY103654.1| Zea mays PCO127516 mRNA sequence Length = 1081 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 473 gcctcgccggtgatgaaggagatgaactcggagacgcactcctg 516 |||||||| |||| |||| ||||||||| || ||||||||||| Sbjct: 299 gcctcgccagtgacgaagctgatgaactccgacacgcactcctg 256
>gb|AF083249.1|AF083249 Homo sapiens Rb binding protein homolog mRNA, partial cds Length = 3218 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctttgcatggaaaacagtag 67 |||||||||||||||||||| Sbjct: 918 ctttgcatggaaaacagtag 937
>gb|AC150892.2| Mus musculus BAC clone RP24-383C4 from 5, complete sequence Length = 168742 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 gctctgctcaagctctgaacactc 152 |||||||||||||| ||||||||| Sbjct: 19109 gctctgctcaagctttgaacactc 19132
>emb|AL133010.1|HSM801294 Homo sapiens mRNA; cDNA DKFZp434P176 (from clone DKFZp434P176) Length = 3520 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctttgcatggaaaacagtag 67 |||||||||||||||||||| Sbjct: 494 ctttgcatggaaaacagtag 513
>dbj|AB030181.1| Homo sapiens mRNA for RBP1-like protein, complete cds Length = 4405 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctttgcatggaaaacagtag 67 |||||||||||||||||||| Sbjct: 2179 ctttgcatggaaaacagtag 2198 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,274,533 Number of Sequences: 3902068 Number of extensions: 3274533 Number of successful extensions: 77657 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 77050 Number of HSP's gapped (non-prelim): 586 length of query: 520 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 497 effective length of database: 17,143,297,704 effective search space: 8520218958888 effective search space used: 8520218958888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
