| Clone Name | rbags31j23 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL928981.7| Mouse DNA sequence from clone RP23-54O14 on chromosome 2, complete sequence Length = 110096 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 catgatttttggctatattag 558 ||||||||||||||||||||| Sbjct: 8178 catgatttttggctatattag 8198
>gb|AC138260.7| Mus musculus chromosome 6, clone RP23-247I19, complete sequence Length = 197686 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 agactaaggatctcttggag 90 |||||||||||||||||||| Sbjct: 19118 agactaaggatctcttggag 19137
>ref|XM_954242.1| Neurospora crassa OR74A hypothetical protein (NCU08245.1) partial mRNA Length = 1395 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tgaaccaactcattctgccc 481 |||||||||||||||||||| Sbjct: 180 tgaaccaactcattctgccc 199
>ref|XM_328950.1| Neurospora crassa OR74A hypothetical protein (NCU08245.1) partial mRNA Length = 1395 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tgaaccaactcattctgccc 481 |||||||||||||||||||| Sbjct: 180 tgaaccaactcattctgccc 199
>gb|AC114643.9| Mus musculus chromosome 6, clone RP24-127D6, complete sequence Length = 215696 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 agactaaggatctcttggag 90 |||||||||||||||||||| Sbjct: 60099 agactaaggatctcttggag 60080
>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome Length = 1315030 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tcctctaccaatatgtatac 382 |||||||||||||||||||| Sbjct: 1226685 tcctctaccaatatgtatac 1226704
>emb|AL590075.8| Human DNA sequence from clone RP11-462L13 on chromosome X, complete sequence Length = 135711 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 535 cagcatgatttttggctatattag 558 |||||||||||| ||||||||||| Sbjct: 10081 cagcatgattttaggctatattag 10058
>gb|AC084165.1|AC084165 Arabidopsis thaliana chromosome 1 BAC F3C3 genomic sequence, complete sequence Length = 90132 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 cataatgtttcactacaaac 123 |||||||||||||||||||| Sbjct: 52753 cataatgtttcactacaaac 52734
>gb|AC009430.2|AC009430 Homo sapiens, clone RP11-45O17, complete sequence Length = 156454 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 cagcatgatttttggctatattag 558 |||||||||||| ||||||||||| Sbjct: 142185 cagcatgattttaggctatattag 142208 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,377,629 Number of Sequences: 3902068 Number of extensions: 4377629 Number of successful extensions: 66146 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66127 Number of HSP's gapped (non-prelim): 19 length of query: 639 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 616 effective length of database: 17,143,297,704 effective search space: 10560271385664 effective search space used: 10560271385664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)