ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags31j03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR788228.11| Zebrafish DNA sequence from clone CH211-15N4 in... 42 1.00
2gb|AC144548.8| Homo sapiens 12 BAC RP11-478C19 (Roswell Park Can... 42 1.00
3gb|AC010853.11| Homo sapiens chromosome 18, clone RP11-349D12, c... 42 1.00
4gb|AC154118.6| Mus musculus chromosome 19, clone RP24-340C10, co... 42 1.00
5emb|BX296558.8| Zebrafish DNA sequence from clone CH211-261N20 i... 42 1.00
6emb|AL606976.25| Mouse DNA sequence from clone RP23-113P22 on ch... 42 1.00
7gb|AC166823.3| Mus musculus BAC clone RP23-435F22 from chromosom... 40 3.9
8gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosom... 40 3.9
9gb|AF259073.1| Mus musculus T-cell receptor alpha locus BAC clon... 40 3.9
10gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 40 3.9
11gb|AC183546.3| Pan troglodytes BAC clone CH251-245P24 from chrom... 40 3.9
12gb|BC043952.1| Xenopus laevis similar to chromosome 20 open read... 40 3.9
13gb|AC126250.4| Mus musculus BAC clone RP23-452K12 from chromosom... 40 3.9
14gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, comple... 40 3.9
15gb|AC116323.6| Mus musculus BAC clone RP23-281F3 from 8, complet... 40 3.9
16gb|AC004594.2| Homo sapiens PAC clone RP5-1101C3 from 7, complet... 40 3.9
17emb|AL953860.3| Human DNA sequence from clone RP5-1107B12 on chr... 40 3.9
18emb|AL035661.16|HS568C11 Human DNA sequence from clone RP4-568C1... 40 3.9
19emb|AL034402.9|HS30G7 Human DNA sequence from clone RP1-30G7 on ... 40 3.9
20gb|AC009377.7| Drosophila melanogaster 3L BAC RP98-26P20 (Roswel... 40 3.9
21dbj|AK127865.1| Homo sapiens cDNA FLJ45968 fis, clone PLACE7016321 40 3.9
22gb|AC009367.9| Drosophila melanogaster 3L BAC RP98-48B15 (Roswel... 40 3.9
23gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 40 3.9
24gb|AC025028.21| Homo sapiens 3 BAC RP11-238M12 (Roswell Park Can... 40 3.9
25gb|AC090096.5| Homo sapiens chromosome 8, clone RP11-159C14, com... 40 3.9
26gb|AE008683.1|AE008683 Mus musculus T-cell receptor alpha/delta ... 40 3.9
27gb|AC008569.7| Homo sapiens chromosome 19 clone CTC-548K16, comp... 40 3.9
28dbj|AK052063.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 40 3.9
29gb|AC024941.30|AC024941 Homo sapiens 12 BAC RP11-900F13 (Roswell... 40 3.9
30gb|AC074087.4| Homo sapiens BAC clone RP11-26C10 from 4, complet... 40 3.9
31gb|AC108938.3| Homo sapiens BAC clone RP11-701A10 from 2, comple... 40 3.9
32gb|AC010095.6| Homo sapiens BAC clone RP11-348G16 from 2, comple... 40 3.9
33gb|AC013271.4| Homo sapiens BAC clone RP11-385J6 from 2, complet... 40 3.9
34dbj|BS000052.1| Pan troglodytes chromosome 22 clone:RP43-049N07,... 40 3.9
35emb|AL671865.11| Mouse DNA sequence from clone RP23-312B13 on ch... 40 3.9
36emb|AJ277755.1|LPN277755 Legionella pneumophila serogroup 1, 30 ... 40 3.9
37gb|AC145183.3| Macropus eugenii clone ME_KBa-60J17, complete seq... 40 3.9
38emb|AL442163.5|CNS07ECT Human chromosome 14 DNA sequence BAC R-9... 40 3.9
39emb|AL162191.6|CNS01RHQ Human chromosome 14 DNA sequence BAC R-3... 40 3.9
40gb|AE003517.3| Drosophila melanogaster chromosome 3L, section 68... 40 3.9
41dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 3.9
42dbj|AP006248.1| Homo sapiens genomic DNA, chromosome 8, clone:RP... 40 3.9
43gb|AC164652.3| Ornithorhynchus anatinus BAC clone OABb-566A1 fro... 40 3.9
44gb|AC125102.4| Mus musculus BAC clone RP24-208N22 from 6, comple... 40 3.9
45gb|AC134838.4| Mus musculus BAC clone RP24-350C10 from 8, comple... 40 3.9
46emb|AL954857.10| Zebrafish DNA sequence from clone DKEY-216D12 i... 40 3.9
47emb|AL450442.2|CNS07EEY Human chromosome 14 DNA sequence BAC R-2... 40 3.9
48emb|AL137065.10| Human DNA sequence from clone RP11-4P13 on chro... 40 3.9
49dbj|AP000403.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL... 40 3.9
50dbj|AB020863.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-onco... 40 3.9 
>emb|CR788228.11| Zebrafish DNA sequence from clone CH211-15N4 in linkage group 3,
            complete sequence
          Length = 156998

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 76   ttgagtaaactcttaaagagt 96
            |||||||||||||||||||||
Sbjct: 3719 ttgagtaaactcttaaagagt 3699
to top
>gb|AC144548.8| Homo sapiens 12 BAC RP11-478C19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 174974

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 53    tcaccagatggtactgtttgttcttgagt 81
             |||||||||||||||| ||| ||||||||
Sbjct: 67976 tcaccagatggtactgattgctcttgagt 67948
to top
>gb|AC010853.11| Homo sapiens chromosome 18, clone RP11-349D12, complete sequence
          Length = 184396

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   ctctattttccttttgtcttt 222
             |||||||||||||||||||||
Sbjct: 74038 ctctattttccttttgtcttt 74018
to top
>gb|AC154118.6| Mus musculus chromosome 19, clone RP24-340C10, complete sequence
          Length = 141422

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 210   tccttttgtctttcttcgcttctct 234
             ||||||||||||||||| |||||||
Sbjct: 83077 tccttttgtctttcttctcttctct 83101
to top
>emb|BX296558.8| Zebrafish DNA sequence from clone CH211-261N20 in linkage group 3,
              complete sequence
          Length = 151242

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 76     ttgagtaaactcttaaagagt 96
              |||||||||||||||||||||
Sbjct: 148900 ttgagtaaactcttaaagagt 148880
to top
>emb|AL606976.25| Mouse DNA sequence from clone RP23-113P22 on chromosome 4, complete
              sequence
          Length = 169465

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 188    gccatctctctaatctctattttcctttt 216
              |||||||||||| |||| |||||||||||
Sbjct: 135130 gccatctctctagtctccattttcctttt 135102
to top
>gb|AC166823.3| Mus musculus BAC clone RP23-435F22 from chromosome 14, complete sequence
          Length = 221537

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    acatgttgttcaacagagaa 152
              ||||||||||||||||||||
Sbjct: 169248 acatgttgttcaacagagaa 169267
to top
>gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosome 8, complete sequence
          Length = 197609

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 198   taatctctattttccttttgtctt 221
             |||||| |||||||||||||||||
Sbjct: 43611 taatctttattttccttttgtctt 43588
to top
>gb|AF259073.1| Mus musculus T-cell receptor alpha locus BAC clone MBAC15 from
            14D1-D2, complete sequence
          Length = 31638

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  acatgttgttcaacagagaa 152
            ||||||||||||||||||||
Sbjct: 9175 acatgttgttcaacagagaa 9194
to top
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 205     tattttccttttgtctttct 224
               ||||||||||||||||||||
Sbjct: 1851099 tattttccttttgtctttct 1851080
to top
>gb|AC183546.3| Pan troglodytes BAC clone CH251-245P24 from chromosome 2, complete
              sequence
          Length = 202850

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    accataaaagtaaatcacat 136
              ||||||||||||||||||||
Sbjct: 135657 accataaaagtaaatcacat 135676
to top
>gb|BC043952.1| Xenopus laevis similar to chromosome 20 open reading frame 6 (human),
            mRNA (cDNA clone IMAGE:5570650), partial cds
          Length = 1703

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  attttccttttgtctttctt 225
            ||||||||||||||||||||
Sbjct: 1662 attttccttttgtctttctt 1643
to top
>gb|AC126250.4| Mus musculus BAC clone RP23-452K12 from chromosome 14, complete sequence
          Length = 194924

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    acatgttgttcaacagagaa 152
              ||||||||||||||||||||
Sbjct: 180409 acatgttgttcaacagagaa 180390
to top
>gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, complete sequence
          Length = 257003

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    catctctctaatctctattt 209
              ||||||||||||||||||||
Sbjct: 213250 catctctctaatctctattt 213269
to top
>gb|AC116323.6| Mus musculus BAC clone RP23-281F3 from 8, complete sequence
          Length = 182204

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    catctctctaatctctattt 209
              ||||||||||||||||||||
Sbjct: 124415 catctctctaatctctattt 124396
to top
>gb|AC004594.2| Homo sapiens PAC clone RP5-1101C3 from 7, complete sequence
          Length = 151874

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    ataaaagtaaatcacatgtt 139
              ||||||||||||||||||||
Sbjct: 121581 ataaaagtaaatcacatgtt 121562
to top
>emb|AL953860.3| Human DNA sequence from clone RP5-1107B12 on chromosome X Contains the
             5' end of a novel gene (MGC44287), complete sequence
          Length = 46890

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   tctattttccttttgtcttt 222
             ||||||||||||||||||||
Sbjct: 28163 tctattttccttttgtcttt 28144
to top
>emb|AL035661.16|HS568C11 Human DNA sequence from clone RP4-568C11 on chromosome 20p11.21-11.23
            Contains the CST7 gene for cystatin F
            (leukocystatin)(cystatin 7, leukocystatin, cystatin-like
            metastasis-associated protein, CMAP), the gene C20ORF3
            for chromosome 20 open reading frame 3, the 3' end of the
            ACAS2L gene for acetyl-Coenzyme A synthetase (AMP
            forming)-like and a CpG island, complete sequence
          Length = 103681

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 104  aaatccctgtataaccataaaagt 127
            |||||||||||||||||| |||||
Sbjct: 5746 aaatccctgtataaccattaaagt 5769
to top
>emb|AL034402.9|HS30G7 Human DNA sequence from clone RP1-30G7 on chromosome Xp11.3-11.4
             Contains a novel gene, an actin, beta (ACTB) pseudogene
             and a CpG island, complete sequence
          Length = 123637

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   tctattttccttttgtcttt 222
             ||||||||||||||||||||
Sbjct: 84210 tctattttccttttgtcttt 84229
to top
>gb|AC009377.7| Drosophila melanogaster 3L BAC RP98-26P20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 194308

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    tcaacagagaaccaaacaga 161
              ||||||||||||||||||||
Sbjct: 122565 tcaacagagaaccaaacaga 122584
to top
>dbj|AK127865.1| Homo sapiens cDNA FLJ45968 fis, clone PLACE7016321
          Length = 3889

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 110  ctgtataaccataaaagtaa 129
            ||||||||||||||||||||
Sbjct: 2484 ctgtataaccataaaagtaa 2465
to top
>gb|AC009367.9| Drosophila melanogaster 3L BAC RP98-48B15 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 178239

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    tcaacagagaaccaaacaga 161
              ||||||||||||||||||||
Sbjct: 170960 tcaacagagaaccaaacaga 170979
to top
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 160     gataatctatcgccgctaaa 179
               ||||||||||||||||||||
Sbjct: 3697592 gataatctatcgccgctaaa 3697611
to top
>gb|AC025028.21| Homo sapiens 3 BAC RP11-238M12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 145969

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   ttttccttttgtctttcttc 226
             ||||||||||||||||||||
Sbjct: 35791 ttttccttttgtctttcttc 35772
to top
>gb|AC090096.5| Homo sapiens chromosome 8, clone RP11-159C14, complete sequence
          Length = 173158

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    accataaaagtaaatcacat 136
              ||||||||||||||||||||
Sbjct: 107023 accataaaagtaaatcacat 107042
to top
>gb|AE008683.1|AE008683 Mus musculus T-cell receptor alpha/delta locus  section 1 of 4 of the
              complete region
          Length = 404892

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    acatgttgttcaacagagaa 152
              ||||||||||||||||||||
Sbjct: 365950 acatgttgttcaacagagaa 365969
to top
>gb|AC008569.7| Homo sapiens chromosome 19 clone CTC-548K16, complete sequence
          Length = 227245

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    tctctctaatctctattttc 211
              ||||||||||||||||||||
Sbjct: 120017 tctctctaatctctattttc 120036
to top
>dbj|AK052063.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230040N22 product:unclassifiable, full
            insert sequence
          Length = 3051

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 199  aatctctattttccttttgtcttt 222
            |||||||||||||||||| |||||
Sbjct: 1955 aatctctattttccttttttcttt 1978
to top
>gb|AC024941.30|AC024941 Homo sapiens 12 BAC RP11-900F13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172246

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    ctgtataaccataaaagtaa 129
              ||||||||||||||||||||
Sbjct: 125652 ctgtataaccataaaagtaa 125633
to top
>gb|AC074087.4| Homo sapiens BAC clone RP11-26C10 from 4, complete sequence
          Length = 156083

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   ttttccttttgtctttcttc 226
             ||||||||||||||||||||
Sbjct: 31068 ttttccttttgtctttcttc 31087
to top
>gb|AC108938.3| Homo sapiens BAC clone RP11-701A10 from 2, complete sequence
          Length = 175222

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   accataaaagtaaatcacat 136
             ||||||||||||||||||||
Sbjct: 92695 accataaaagtaaatcacat 92714
to top
>gb|AC010095.6| Homo sapiens BAC clone RP11-348G16 from 2, complete sequence
          Length = 179517

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   accataaaagtaaatcacat 136
             ||||||||||||||||||||
Sbjct: 47726 accataaaagtaaatcacat 47707
to top
>gb|AC013271.4| Homo sapiens BAC clone RP11-385J6 from 2, complete sequence
          Length = 155702

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   accataaaagtaaatcacat 136
             ||||||||||||||||||||
Sbjct: 31166 accataaaagtaaatcacat 31185
to top
>dbj|BS000052.1| Pan troglodytes chromosome 22 clone:RP43-049N07, map 22, complete
              sequences
          Length = 180152

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    ctaatctctattttcctttt 216
              ||||||||||||||||||||
Sbjct: 106801 ctaatctctattttcctttt 106782
to top
>emb|AL671865.11| Mouse DNA sequence from clone RP23-312B13 on chromosome X, complete
              sequence
          Length = 226471

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 208    tttccttttgtctttcttcgcttc 231
              ||||||||||||||||||| ||||
Sbjct: 155009 tttccttttgtctttcttcccttc 155032
to top
>emb|AJ277755.1|LPN277755 Legionella pneumophila serogroup 1, 30 kb instable genetic element
          Length = 29223

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    tttgttcttgagtaaactct 88
             ||||||||||||||||||||
Sbjct: 25134 tttgttcttgagtaaactct 25153
to top
>gb|AC145183.3| Macropus eugenii clone ME_KBa-60J17, complete sequence
          Length = 168360

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    tattttccttttgtctttct 224
              ||||||||||||||||||||
Sbjct: 136830 tattttccttttgtctttct 136811
to top
>emb|AL442163.5|CNS07ECT Human chromosome 14 DNA sequence BAC R-90P16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 167642

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   tctattttccttttgtcttt 222
             ||||||||||||||||||||
Sbjct: 19346 tctattttccttttgtcttt 19327
to top
>emb|AL162191.6|CNS01RHQ Human chromosome 14 DNA sequence BAC R-349D8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 204662

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 217    gtctttcttcgcttctctct 236
              ||||||||||||||||||||
Sbjct: 118488 gtctttcttcgcttctctct 118469
to top
>gb|AE003517.3| Drosophila melanogaster chromosome 3L, section 68 of 83 of the complete
              sequence
          Length = 257692

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    tcaacagagaaccaaacaga 161
              ||||||||||||||||||||
Sbjct: 181694 tcaacagagaaccaaacaga 181713
to top
>dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, section 20/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    ctaatctctattttcctttt 216
              ||||||||||||||||||||
Sbjct: 163745 ctaatctctattttcctttt 163726
to top
>dbj|AP006248.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-349F21, complete
             sequence
          Length = 186218

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 199   aatctctattttccttttgtcttt 222
             |||||||||||| |||||||||||
Sbjct: 92713 aatctctattttgcttttgtcttt 92736
to top
>gb|AC164652.3| Ornithorhynchus anatinus BAC clone OABb-566A1 from chromosome unknown,
              complete sequence
          Length = 145427

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 186    ctgccatctctctaatctct 205
              ||||||||||||||||||||
Sbjct: 132985 ctgccatctctctaatctct 133004
to top
>gb|AC125102.4| Mus musculus BAC clone RP24-208N22 from 6, complete sequence
          Length = 163235

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 199    aatctctattttccttttgtcttt 222
              |||||||||||||||||| |||||
Sbjct: 107877 aatctctattttccttttttcttt 107854
to top
>gb|AC134838.4| Mus musculus BAC clone RP24-350C10 from 8, complete sequence
          Length = 177716

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 198   taatctctattttccttttgtctt 221
             |||||| |||||||||||||||||
Sbjct: 54513 taatctttattttccttttgtctt 54536
to top
>emb|AL954857.10| Zebrafish DNA sequence from clone DKEY-216D12 in linkage group 23,
             complete sequence
          Length = 65564

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 214   tttgtctttcttcgcttctctctt 237
             ||||||||||||| ||||||||||
Sbjct: 28480 tttgtctttcttctcttctctctt 28457
to top
>emb|AL450442.2|CNS07EEY Human chromosome 14 DNA sequence BAC R-214N1 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 145035

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    tctattttccttttgtcttt 222
              ||||||||||||||||||||
Sbjct: 141287 tctattttccttttgtcttt 141268
to top
>emb|AL137065.10| Human DNA sequence from clone RP11-4P13 on chromosome Xq22.1-23, complete
              sequence
          Length = 119311

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    tctattttccttttgtcttt 222
              ||||||||||||||||||||
Sbjct: 102482 tctattttccttttgtcttt 102463
to top
>dbj|AP000403.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region,
            clone:B330A3, complete sequence
          Length = 160920

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 197  ctaatctctattttcctttt 216
            ||||||||||||||||||||
Sbjct: 5144 ctaatctctattttcctttt 5125
to top
>dbj|AB020863.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular
             colorectal and non-small cell lung cancer , segment 6/11
          Length = 156909

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 199   aatctctattttccttttgtcttt 222
             |||||||||||| |||||||||||
Sbjct: 40282 aatctctattttgcttttgtcttt 40305


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,331,471
Number of Sequences: 3902068
Number of extensions: 3331471
Number of successful extensions: 71377
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71264
Number of HSP's gapped (non-prelim): 113
length of query: 300
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 278
effective length of database: 17,147,199,772
effective search space: 4766921536616
effective search space used: 4766921536616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top