ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags31i22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469724.1| Oryza sativa (japonica cultivar-group), mRNA 105 2e-19
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 105 2e-19
3gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic... 105 2e-19
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
5dbj|AK101718.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
6gb|AY106089.1| Zea mays PCO106649 mRNA sequence 78 4e-11
7gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 46 0.14
8gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 2.3
9gb|AC146440.5| Pan troglodytes BAC clone RP43-11P11 from 7, comp... 42 2.3
10gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 2.3
11gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 2.3
12gb|AC010973.6| Homo sapiens BAC clone RP11-148K1 from 7, complet... 42 2.3
13gb|AC096591.1| Homo sapiens BAC clone RP11-768F19 from 2, comple... 42 2.3
14dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 2.3
15dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.3
16emb|BX005021.4| Zebrafish DNA sequence from clone DKEY-69D12, co... 42 2.3
17ref|XM_506708.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 8.9
18ref|XM_464027.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.9
19ref|NM_191746.1| Oryza sativa (japonica cultivar-group), predic... 40 8.9
20ref|XM_590532.2| PREDICTED: Bos taurus similar to Rho-related GT... 40 8.9
21gb|AY659339.1| Synthetic construct Peudomonas aeruginosa clone F... 40 8.9
22ref|XM_613217.2| PREDICTED: Bos taurus similar to cingulin (LOC5... 40 8.9
23gb|AC121267.17| Mus musculus chromosome 19, clone RP24-444E1, co... 40 8.9
24gb|AC107456.9| Mus musculus chromosome 3, clone RP23-273L6, comp... 40 8.9
25ref|XM_752360.1| Ustilago maydis 521 hypothetical protein (UM013... 40 8.9
26gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 8.9
27emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4,... 40 8.9
28emb|BX548046.4| Zebrafish DNA sequence from clone DKEY-176G1 in ... 40 8.9
29gb|AC018902.8| Homo sapiens chromosome 15 clone RP11-327C2 map 1... 40 8.9
30dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
31dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
32dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
33gb|AC148867.3| Monodelphis domestica clone VMRC6-379O2, complete... 40 8.9
34dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
35gb|AE004441.1| Pseudomonas aeruginosa PAO1, section 2 of 529 of ... 40 8.9
36gb|AF497482.1| Micromonospora echinospora calicheamicin biosynth... 40 8.9
37dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 8.9
38dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
39dbj|AK100898.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
40dbj|AK072646.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
41emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 8.9
42gb|AC162372.5| Mus musculus chromosome 19, clone RP23-177G18, co... 40 8.9
43gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 8.9
44emb|BX005178.7| Mouse DNA sequence from clone RP23-413G6 on chro... 40 8.9
45gb|AC129323.6| Mus musculus BAC clone RP23-237M15 from 9, comple... 40 8.9
46emb|AM050110.1| Aspergillus niger mRNA for hypothetical protein,... 40 8.9
47gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold 40 8.9
48gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 40 8.9 
>ref|XM_469724.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1308

 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                        
Query: 253  tacttcttgatcttcttatcgttgcggcccctcttccgctgctcccgcctctcctccgag 312
            ||||||||||||||||||||||| | |||||| |||| |||||| | ||| |||||||||
Sbjct: 1307 tacttcttgatcttcttatcgtttctgccccttttcctctgctctctcctttcctccgag 1248

                                         
Query: 313  tagttcttcttcaccagcatcttgtgcat 341
            |||| |||||| |||||||||||||||||
Sbjct: 1247 tagtgcttctttaccagcatcttgtgcat 1219
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                            
Query: 253      tacttcttgatcttcttatcgttgcggcccctcttccgctgctcccgcctctcctccgag 312
                ||||||||||||||||||||||| | |||||| |||| |||||| | ||| |||||||||
Sbjct: 30409097 tacttcttgatcttcttatcgtttctgccccttttcctctgctctctcctttcctccgag 30409156

                                             
Query: 313      tagttcttcttcaccagcatcttgtgcat 341
                |||| |||||| |||||||||||||||||
Sbjct: 30409157 tagtgcttctttaccagcatcttgtgcat 30409185
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>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete
             sequence
          Length = 149380

 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                         
Query: 253   tacttcttgatcttcttatcgttgcggcccctcttccgctgctcccgcctctcctccgag 312
             ||||||||||||||||||||||| | |||||| |||| |||||| | ||| |||||||||
Sbjct: 67918 tacttcttgatcttcttatcgtttctgccccttttcctctgctctctcctttcctccgag 67859

                                          
Query: 313   tagttcttcttcaccagcatcttgtgcat 341
             |||| |||||| |||||||||||||||||
Sbjct: 67858 tagtgcttctttaccagcatcttgtgcat 67830
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                            
Query: 253      tacttcttgatcttcttatcgttgcggcccctcttccgctgctcccgcctctcctccgag 312
                ||||||||||||||||||||||| | |||||| |||| |||||| | ||| |||||||||
Sbjct: 30500519 tacttcttgatcttcttatcgtttctgccccttttcctctgctctctcctttcctccgag 30500578

                                             
Query: 313      tagttcttcttcaccagcatcttgtgcat 341
                |||| |||||| |||||||||||||||||
Sbjct: 30500579 tagtgcttctttaccagcatcttgtgcat 30500607
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>dbj|AK101718.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060O11, full
            insert sequence
          Length = 1708

 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                        
Query: 253  tacttcttgatcttcttatcgttgcggcccctcttccgctgctcccgcctctcctccgag 312
            ||||||||||||||||||||||| | |||||| |||| |||||| | ||| |||||||||
Sbjct: 1398 tacttcttgatcttcttatcgtttctgccccttttcctctgctctctcctttcctccgag 1339

                                         
Query: 313  tagttcttcttcaccagcatcttgtgcat 341
            |||| |||||| |||||||||||||||||
Sbjct: 1338 tagtgcttctttaccagcatcttgtgcat 1310
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>gb|AY106089.1| Zea mays PCO106649 mRNA sequence
          Length = 1256

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 132/163 (80%)
 Strand = Plus / Minus

                                                                        
Query: 256  ttcttgatcttcttatcgttgcggcccctcttccgctgctcccgcctctcctccgagtag 315
            ||||| |||||||| ||||| |  || || |||| |||||||| || ||| |||||||||
Sbjct: 1084 ttcttcatcttcttgtcgttcctacctcttttcctctgctccctccgctcttccgagtag 1025

                                                                        
Query: 316  ttcttcttcaccagcatcttgtgcatcgacactcttagggcggcgagcaccgcggccagc 375
            | |||||||||||||||||| ||||| || ||  | || || || ||||| |  || | |
Sbjct: 1024 tgcttcttcaccagcatcttatgcatggaaaccttcagcgcagccagcactgaagctaac 965

                                                       
Query: 376  acctcctcctgcttcgaggcgtcgaggcttccctgcagcgcca 418
            |||||||| ||||||| | ||||||||||||| ||||| ||||
Sbjct: 964  acctcctcttgcttcgcgacgtcgaggcttccttgcagtgcca 922



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                       
Query: 544 gcctggttcggcatgtttgacgcacccatgacggtccacaggagatccgcggatgaactg 603
           |||||| | ||||||||||| || |||||||| ||||||||||| |||| ||| |  |||
Sbjct: 796 gcctggctgggcatgtttgatgcgcccatgacagtccacaggagttccgaggacgggctg 737

                                                          
Query: 604 taggctaggctagtggggatgtagctcttttctgttgtgatcacctt 650
            | ||||||||||| || || || ||||||||  |||| ||||||||
Sbjct: 736 gatgctaggctagtaggaatataactcttttccattgtaatcacctt 690
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 356     cggcgagcaccgcggccagcacc 378
               |||||||||||||||||||||||
Sbjct: 2735849 cggcgagcaccgcggccagcacc 2735827
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 354    ggcggcgagcaccgcggccag 374
              |||||||||||||||||||||
Sbjct: 461954 ggcggcgagcaccgcggccag 461974
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>gb|AC146440.5| Pan troglodytes BAC clone RP43-11P11 from 7, complete sequence
          Length = 181369

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 279   gcccctcttccgctgctcccgcctc 303
             |||||||| ||||||||||||||||
Sbjct: 89400 gcccctctcccgctgctcccgcctc 89424
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 354     ggcggcgagcaccgcggccag 374
               |||||||||||||||||||||
Sbjct: 2437576 ggcggcgagcaccgcggccag 2437556
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 358     gcgagcaccgcggccagcacc 378
               |||||||||||||||||||||
Sbjct: 1650016 gcgagcaccgcggccagcacc 1649996
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>gb|AC010973.6| Homo sapiens BAC clone RP11-148K1 from 7, complete sequence
          Length = 222605

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 279    gcccctcttccgctgctcccgcctc 303
              |||||||| ||||||||||||||||
Sbjct: 216771 gcccctctcccgctgctcccgcctc 216747
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>gb|AC096591.1| Homo sapiens BAC clone RP11-768F19 from 2, complete sequence
          Length = 182435

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   ttgctgagcctgctcttacaa 148
             |||||||||||||||||||||
Sbjct: 79578 ttgctgagcctgctcttacaa 79598
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 356    cggcgagcaccgcggccagcacctc 380
              |||||||||||||||||||| ||||
Sbjct: 440132 cggcgagcaccgcggccagcgcctc 440108
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 353     gggcggcgagcaccgcggcca 373
               |||||||||||||||||||||
Sbjct: 1589570 gggcggcgagcaccgcggcca 1589590



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 355     gcggcgagcaccgcggccagcacc 378
               ||||||||||| ||||||||||||
Sbjct: 5195031 gcggcgagcacggcggccagcacc 5195008



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 356     cggcgagcaccgcggccagc 375
               ||||||||||||||||||||
Sbjct: 3283509 cggcgagcaccgcggccagc 3283528



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 354     ggcggcgagcaccgcggcca 373
               ||||||||||||||||||||
Sbjct: 2998293 ggcggcgagcaccgcggcca 2998274



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 352     agggcggcgagcaccgcggc 371
               ||||||||||||||||||||
Sbjct: 1784651 agggcggcgagcaccgcggc 1784632



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 356     cggcgagcaccgcggccagc 375
               ||||||||||||||||||||
Sbjct: 1406393 cggcgagcaccgcggccagc 1406374
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>emb|BX005021.4| Zebrafish DNA sequence from clone DKEY-69D12, complete sequence
          Length = 188337

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 46     gattacagctaaaacaacaac 66
              |||||||||||||||||||||
Sbjct: 169159 gattacagctaaaacaacaac 169179
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>ref|XM_506708.1| PREDICTED Oryza sativa (japonica cultivar-group), P0030G11.14 mRNA
          Length = 2311

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 369  ggccagcacctcctcctgct 388
            ||||||||||||||||||||
Sbjct: 1921 ggccagcacctcctcctgct 1902
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>ref|XM_464027.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2311

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 369  ggccagcacctcctcctgct 388
            ||||||||||||||||||||
Sbjct: 1921 ggccagcacctcctcctgct 1902
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>ref|NM_191746.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1095

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 tcttccgctgctcccgcctctcct 307
           |||||| |||||||||||||||||
Sbjct: 937 tcttcctctgctcccgcctctcct 914
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>ref|XM_590532.2| PREDICTED: Bos taurus similar to Rho-related GTP-binding protein
           RhoD (Rho-related protein HP1) (RhoHP1) (LOC512924),
           mRNA
          Length = 1039

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 cttcttcaccagcatcttgt 337
           ||||||||||||||||||||
Sbjct: 426 cttcttcaccagcatcttgt 407
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>gb|AY659339.1| Synthetic construct Peudomonas aeruginosa clone FLH039079.01F
           PA0017 gene, partial cds
          Length = 1305

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 cggcgagcaccgcggccagc 375
           ||||||||||||||||||||
Sbjct: 49  cggcgagcaccgcggccagc 30
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>ref|XM_613217.2| PREDICTED: Bos taurus similar to cingulin (LOC533725), mRNA
          Length = 5021

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 168  tcttgtgcttctcagcttctaatg 191
            |||| |||||||||||||||||||
Sbjct: 1708 tcttctgcttctcagcttctaatg 1685
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>gb|AC121267.17| Mus musculus chromosome 19, clone RP24-444E1, complete sequence
          Length = 160720

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   catttctttcttgtgcttct 179
             ||||||||||||||||||||
Sbjct: 76847 catttctttcttgtgcttct 76866
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>gb|AC107456.9| Mus musculus chromosome 3, clone RP23-273L6, complete sequence
          Length = 185661

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 148   atttcgtcactacatttctttctt 171
             ||||| ||||||||||||||||||
Sbjct: 85654 atttcatcactacatttctttctt 85677
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>ref|XM_752360.1| Ustilago maydis 521 hypothetical protein (UM01306.1) partial mRNA
          Length = 2976

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  cagcatcttgtgcatcgaca 346
            ||||||||||||||||||||
Sbjct: 2811 cagcatcttgtgcatcgaca 2792
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 358     gcgagcaccgcggccagcac 377
               ||||||||||||||||||||
Sbjct: 2986080 gcgagcaccgcggccagcac 2986099
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>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23,
             complete sequence
          Length = 150305

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   tctttcttgtgcttctcagc 183
             ||||||||||||||||||||
Sbjct: 46676 tctttcttgtgcttctcagc 46657
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>emb|BX548046.4| Zebrafish DNA sequence from clone DKEY-176G1 in linkage group 17,
              complete sequence
          Length = 168695

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     ttacagctaaaacaacaact 67
              ||||||||||||||||||||
Sbjct: 136608 ttacagctaaaacaacaact 136627
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>gb|AC018902.8| Homo sapiens chromosome 15 clone RP11-327C2 map 15Q21.2, complete
             sequence
          Length = 157226

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   ccagcacctcctcctgcttc 390
             ||||||||||||||||||||
Sbjct: 75688 ccagcacctcctcctgcttc 75669
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 164     tctttcttgtgcttctcagc 183
               ||||||||||||||||||||
Sbjct: 4418944 tctttcttgtgcttctcagc 4418925
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 369     ggccagcacctcctcctgct 388
               ||||||||||||||||||||
Sbjct: 1748976 ggccagcacctcctcctgct 1748995
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 284      tcttccgctgctcccgcctctcct 307
                |||||| |||||||||||||||||
Sbjct: 29734284 tcttcctctgctcccgcctctcct 29734261
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>gb|AC148867.3| Monodelphis domestica clone VMRC6-379O2, complete sequence
          Length = 162030

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   attgacaaggaaaaatggtt 129
             ||||||||||||||||||||
Sbjct: 34005 attgacaaggaaaaatggtt 33986
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>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1131B07
          Length = 109135

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 284   tcttccgctgctcccgcctctcct 307
             |||||| |||||||||||||||||
Sbjct: 64015 tcttcctctgctcccgcctctcct 63992
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>gb|AE004441.1| Pseudomonas aeruginosa PAO1, section 2 of 529 of the complete genome
          Length = 12213

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 356  cggcgagcaccgcggccagc 375
            ||||||||||||||||||||
Sbjct: 6566 cggcgagcaccgcggccagc 6585
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>gb|AF497482.1| Micromonospora echinospora calicheamicin biosynthetic locus, complete
             sequence
          Length = 90348

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 354   ggcggcgagcaccgcggccagcac 377
             ||||||||||||||||||| ||||
Sbjct: 79068 ggcggcgagcaccgcggccggcac 79045
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 352    agggcggcgagcaccgcggc 371
              ||||||||||||||||||||
Sbjct: 670634 agggcggcgagcaccgcggc 670653
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>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0030G11
          Length = 143943

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   ggccagcacctcctcctgct 388
             ||||||||||||||||||||
Sbjct: 66988 ggccagcacctcctcctgct 67007
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>dbj|AK100898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131C20, full
            insert sequence
          Length = 2322

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 369  ggccagcacctcctcctgct 388
            ||||||||||||||||||||
Sbjct: 1932 ggccagcacctcctcctgct 1913
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>dbj|AK072646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023129P11, full
            insert sequence
          Length = 2324

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 369  ggccagcacctcctcctgct 388
            ||||||||||||||||||||
Sbjct: 1934 ggccagcacctcctcctgct 1915
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>emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0806H05, complete
             sequence
          Length = 102515

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   tctttcttgtgcttctcagc 183
             ||||||||||||||||||||
Sbjct: 83192 tctttcttgtgcttctcagc 83173
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>gb|AC162372.5| Mus musculus chromosome 19, clone RP23-177G18, complete sequence
          Length = 178801

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    catttctttcttgtgcttct 179
              ||||||||||||||||||||
Sbjct: 142814 catttctttcttgtgcttct 142795
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 365     ccgcggccagcacctcctcc 384
               ||||||||||||||||||||
Sbjct: 4212824 ccgcggccagcacctcctcc 4212843
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>emb|BX005178.7| Mouse DNA sequence from clone RP23-413G6 on chromosome X, complete
             sequence
          Length = 28832

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   ggttgctgagcctgctctta 145
             ||||||||||||||||||||
Sbjct: 26572 ggttgctgagcctgctctta 26553
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>gb|AC129323.6| Mus musculus BAC clone RP23-237M15 from 9, complete sequence
          Length = 170293

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   atttctttcttgtgcttctc 180
             ||||||||||||||||||||
Sbjct: 95108 atttctttcttgtgcttctc 95089
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>emb|AM050110.1| Aspergillus niger mRNA for hypothetical protein, ORF9, clone 209
          Length = 797

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 cctctcctccgagtagttct 319
           ||||||||||||||||||||
Sbjct: 622 cctctcctccgagtagttct 641
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>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    attgacaaggaaaaatggtt 129
              ||||||||||||||||||||
Sbjct: 489966 attgacaaggaaaaatggtt 489947
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 530    gtagctgggacgcggcctgg 549
              ||||||||||||||||||||
Sbjct: 820736 gtagctgggacgcggcctgg 820717


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,100,616
Number of Sequences: 3902068
Number of extensions: 6100616
Number of successful extensions: 103950
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103035
Number of HSP's gapped (non-prelim): 915
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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