>gb|AY108180.1| Zea mays PCO134590 mRNA sequence
          Length = 1538

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                        
Query: 564  ccttcagctttctgagcgaaccactaatctcctctgtcaacagaacttgaacgggagcag 623
            |||| |||||||| || || ||||||||||| |||||||| ||||||||||| ||||| |
Sbjct: 1208 cctttagctttctaagtgagccactaatctcttctgtcaatagaacttgaacaggagctg 1149

                                                 
Query: 624  gttcaaacttgtgtctacccagacgatgtggggctga 660
            | ||||| |||||||| ||||||||| ||||| ||||
Sbjct: 1148 gctcaaatttgtgtctgcccagacgaggtgggcctga 1112



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                        
Query: 419  ttgcttaatttcttgtttggtgcaagtatgccacgtttttcaatgctcttatagcgatcc 478
            ||||||| | ||||| ||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 1287 ttgcttattctcttgcttggtgcaagtattccacgtttctcaatgctcttgtagcgatcc 1228

                                  
Query: 479  ctcgctagattgcagcacccct 500
            || || ||||| || |||||||
Sbjct: 1227 cttgcaagattacaacacccct 1206

>gb|AC104283.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1607_F09,
             complete sequence
          Length = 95755

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                         
Query: 435   ttggtgcaagtatgccacgtttttcaatgctcttatagcgatccctcgctagattgcagc 494
             ||||||||||||| |||||||| || ||||||||||| || ||||| |||||||| ||||
Sbjct: 48646 ttggtgcaagtattccacgtttctcgatgctcttatatcggtcccttgctagattacagc 48705

                      
Query: 495   acccctgca 503
             |||||||||
Sbjct: 48706 acccctgca 48714



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                         
Query: 563   accttcagctttctgagcgaaccactaatctcctctgtcaacagaacttgaacgggagca 622
             |||||||||||||| || || ||||||||||| ||||| || ||||||||||| ||||| 
Sbjct: 48785 accttcagctttctaagagagccactaatctcttctgttaatagaacttgaacaggagct 48844

                     
Query: 623   ggttcaaa 630
             ||||||||
Sbjct: 48845 ggttcaaa 48852



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 630   acttgtgtctacccagacgatgtggggctgacttgagtctttnctgcttagc 681
             |||||||||| ||||||||| | ||||||||||| ||||||| ||| |||||
Sbjct: 49776 acttgtgtctgcccagacgaggcggggctgacttcagtctttcctgtttagc 49827

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                           
Query: 435     ttggtgcaagtatgccacgtttttcaatgctcttatagcgatccctcgctagattgcagc 494
               ||||||||||||| |||||||| || ||||||||||| || ||||| |||||||| ||||
Sbjct: 2481624 ttggtgcaagtattccacgtttctcgatgctcttatatcggtcccttgctagattacagc 2481683

                        
Query: 495     acccctgca 503
               |||||||||
Sbjct: 2481684 acccctgca 2481692



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                           
Query: 563     accttcagctttctgagcgaaccactaatctcctctgtcaacagaacttgaacgggagca 622
               |||||||||||||| || || ||||||||||| ||||| || ||||||||||| ||||| 
Sbjct: 2481763 accttcagctttctaagagagccactaatctcttctgttaatagaacttgaacaggagct 2481822

                       
Query: 623     ggttcaaa 630
               ||||||||
Sbjct: 2481823 ggttcaaa 2481830



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                   
Query: 630     acttgtgtctacccagacgatgtggggctgacttgagtctttnctgcttagc 681
               |||||||||| ||||||||| | ||||||||||| ||||||| ||| |||||
Sbjct: 2482754 acttgtgtctgcccagacgaggcggggctgacttcagtctttcctgtttagc 2482805

>gb|AC120397.7| Mus musculus chromosome 18, clone RP24-332E21, complete sequence
          Length = 178502

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 225    ctcttttaactccctcatcaa 245
              |||||||||||||||||||||
Sbjct: 120262 ctcttttaactccctcatcaa 120282

>gb|AC135736.6| Mus musculus BAC clone RP23-251A14 from chromosome 16, complete sequence
          Length = 193253

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 539    acatcaacaaaacaagaaaatctta 563
              |||| ||||||||||||||||||||
Sbjct: 169843 acataaacaaaacaagaaaatctta 169819

>gb|AC122392.3| Mus musculus BAC clone RP24-81I14 from chromosome 16, complete sequence
          Length = 195550

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 539   acatcaacaaaacaagaaaatctta 563
             |||| ||||||||||||||||||||
Sbjct: 26637 acataaacaaaacaagaaaatctta 26613

>emb|BX321882.7| Zebrafish DNA sequence from clone DKEYP-30F1 in linkage group 12,
              complete sequence
          Length = 187475

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 539    acatcaacaaaacaagaaaat 559
              |||||||||||||||||||||
Sbjct: 181490 acatcaacaaaacaagaaaat 181470

>emb|BX323576.9| Zebrafish DNA sequence from clone DKEYP-77A12 in linkage group 7,
             complete sequence
          Length = 163069

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 543   caacaaaacaagaaaatctta 563
             |||||||||||||||||||||
Sbjct: 42320 caacaaaacaagaaaatctta 42300

>emb|BX005327.9| Zebrafish DNA sequence from clone DKEY-65B16 in linkage group 7,
             complete sequence
          Length = 237129

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 543   caacaaaacaagaaaatctta 563
             |||||||||||||||||||||
Sbjct: 11506 caacaaaacaagaaaatctta 11526

>emb|BX571841.6| Zebrafish DNA sequence from clone DKEY-52H13 in linkage group 18,
             complete sequence
          Length = 105977

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 420   tgcttaatttcttgtttggtg 440
             |||||||||||||||||||||
Sbjct: 67117 tgcttaatttcttgtttggtg 67137

>emb|BX247878.5| Zebrafish DNA sequence from clone CH211-266O5 in linkage group 7,
              complete sequence
          Length = 190715

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 543    caacaaaacaagaaaatctta 563
              |||||||||||||||||||||
Sbjct: 147993 caacaaaacaagaaaatctta 148013

>gb|AY386674.1| Monodelphis domestica clone Mdo344 microsatellite sequence
          Length = 353

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 544 aacaaaacaagaaaatcttaccttc 568
           |||||||||| ||||||||||||||
Sbjct: 121 aacaaaacaaaaaaatcttaccttc 97

>gb|AC114003.4| Mus musculus chromosome 18 clone RP23-174C24, complete sequence
          Length = 223724

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 534    tctagacatcaacaaaacaa 553
              ||||||||||||||||||||
Sbjct: 107515 tctagacatcaacaaaacaa 107496

>gb|AC140460.3| Mus musculus BAC clone RP24-151D4 from chromosome 9, complete sequence
          Length = 196545

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 589   aatctcctctgtcaacagaa 608
             ||||||||||||||||||||
Sbjct: 32882 aatctcctctgtcaacagaa 32863

>ref|XM_749742.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g07760)
           partial mRNA
          Length = 510

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 aaggcaaaattgtgctggcc 272
           ||||||||||||||||||||
Sbjct: 158 aaggcaaaattgtgctggcc 177

>gb|AC146172.2| Pan troglodytes BAC clone RP43-24M4 from 7, complete sequence
          Length = 223283

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 552   aagaaaatcttaccttcagc 571
             ||||||||||||||||||||
Sbjct: 49978 aagaaaatcttaccttcagc 49997

>gb|AC147050.2| Pan troglodytes BAC clone RP43-138F4 from 7, complete sequence
          Length = 190626

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 552    aagaaaatcttaccttcagc 571
              ||||||||||||||||||||
Sbjct: 162206 aagaaaatcttaccttcagc 162225

>gb|AC140424.2| Mus musculus BAC clone RP23-112O8 from chromosome 9, complete sequence
          Length = 179943

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 589   aatctcctctgtcaacagaa 608
             ||||||||||||||||||||
Sbjct: 41419 aatctcctctgtcaacagaa 41438

>gb|AC116033.3| Zea mays genomic clone ZM15C05 sequence, complete sequence
          Length = 99606

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 591   tctcctctgtcaacagaact 610
             ||||||||||||||||||||
Sbjct: 77973 tctcctctgtcaacagaact 77992

>gb|AC140951.1| Pan troglodytes BAC clone RP43-60K3 from 7, complete sequence
          Length = 165269

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 552    aagaaaatcttaccttcagc 571
              ||||||||||||||||||||
Sbjct: 108129 aagaaaatcttaccttcagc 108148

>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
               hansenii
          Length = 2051428

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 328     catcaattcaagtcgttttg 347
               ||||||||||||||||||||
Sbjct: 1834217 catcaattcaagtcgttttg 1834236

>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 149     ctgatgtacgaaatctgccc 168
               ||||||||||||||||||||
Sbjct: 3392183 ctgatgtacgaaatctgccc 3392164

>emb|AL929356.1|PFA929356 Plasmodium falciparum strain 3D7, chromosome 9; segment 2/5
          Length = 335050

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   tatttgtagaactacatttt 299
             ||||||||||||||||||||
Sbjct: 98907 tatttgtagaactacatttt 98888

>gb|AC022994.9| Homo sapiens chromosome 11, clone RP11-735P2, complete sequence
          Length = 167760

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     ggattttgacatttttgtgt 55
              ||||||||||||||||||||
Sbjct: 117545 ggattttgacatttttgtgt 117564

>gb|AC117473.3| Homo sapiens 3 BAC RP11-730J6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167691

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   gaacatgcaccctgcattta 405
             ||||||||||||||||||||
Sbjct: 93541 gaacatgcaccctgcattta 93522

>gb|AC148316.3| Pan troglodytes BAC clone CH251-508B1 from chromosome 7, complete
             sequence
          Length = 162525

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 552   aagaaaatcttaccttcagc 571
             ||||||||||||||||||||
Sbjct: 49691 aagaaaatcttaccttcagc 49710

>gb|AC148300.3| Pan troglodytes BAC clone CH251-64B13 from chromosome 7, complete
              sequence
          Length = 173568

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 552    aagaaaatcttaccttcagc 571
              ||||||||||||||||||||
Sbjct: 162493 aagaaaatcttaccttcagc 162512

>gb|AC087072.2|AC087072 Homo sapiens chromosome 7 clone RP11-609L3, complete sequence
          Length = 150856

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 552   aagaaaatcttaccttcagc 571
             ||||||||||||||||||||
Sbjct: 48333 aagaaaatcttaccttcagc 48314

>emb|BX664706.9| Zebrafish DNA sequence from clone CH211-251F6 in linkage group 20,
             complete sequence
          Length = 103574

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 546   caaaacaagaaaatcttacc 565
             ||||||||||||||||||||
Sbjct: 74390 caaaacaagaaaatcttacc 74371

>emb|BX005129.6| Zebrafish DNA sequence from clone CH211-241D24 in linkage group 6,
            complete sequence
          Length = 166885

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 542  tcaacaaaacaagaaaatct 561
            ||||||||||||||||||||
Sbjct: 4848 tcaacaaaacaagaaaatct 4867

>gb|AC130693.15| Mus musculus chromosome 19, clone RP23-385G14, complete sequence
          Length = 184943

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 534    tctagacatcaacaaaacaa 553
              ||||||||||||||||||||
Sbjct: 149236 tctagacatcaacaaaacaa 149217

>emb|AL928796.9| Mouse DNA sequence from clone RP23-150I5 on chromosome 2, complete
              sequence
          Length = 203793

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 542    tcaacaaaacaagaaaatct 561
              ||||||||||||||||||||
Sbjct: 188029 tcaacaaaacaagaaaatct 188010

>gb|AC115715.12| Mus musculus chromosome 19, clone RP23-466H21, complete sequence
          Length = 182611

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 534    tctagacatcaacaaaacaa 553
              ||||||||||||||||||||
Sbjct: 107055 tctagacatcaacaaaacaa 107074



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 534   tctagacatcaacaaaacaa 553
             ||||||||||||||||||||
Sbjct: 67779 tctagacatcaacaaaacaa 67798

>gb|AC002376.1|T1G11 Sequence of BAC T1G11 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 100079

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 555   aaaatcttaccttcagcttt 574
             ||||||||||||||||||||
Sbjct: 64514 aaaatcttaccttcagcttt 64533

>emb|AL591373.8| Mouse DNA sequence from clone RP23-268M6 on chromosome 18, complete
              sequence
          Length = 174264

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 534    tctagacatcaacaaaacaa 553
              ||||||||||||||||||||
Sbjct: 174201 tctagacatcaacaaaacaa 174220


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,314,331
Number of Sequences: 3902068
Number of extensions: 5314331
Number of successful extensions: 103844
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103686
Number of HSP's gapped (non-prelim): 158
length of query: 681
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 658
effective length of database: 17,143,297,704
effective search space: 11280289889232
effective search space used: 11280289889232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)