>MDHM2_ARATH (Q9LKA3) Malate dehydrogenase 2, mitochondrial precursor (EC|
           1.1.1.37) (mNAD-MDH 2)
          Length = 341

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = -3

Query: 240 LVVRGVEPTTVLALRAVLEREGIPERPVQQVLLGSP-GMAIVHSTLLPLLPVRKSVSLY- 67
           ++VR   P     LR     E +P+R V  V+LG+  G+    S L+ L P+  S+SLY 
Sbjct: 5   MIVRSASPVKQGLLRRGFASESVPDRKV--VILGAAGGIGQPLSLLMKLNPLVSSLSLYD 62

Query: 66  LRGTLGLPAN 37
           +  T G+ A+
Sbjct: 63  IANTPGVAAD 72

>GIL1_ENTHI (P32022) Galactose-inhibitable lectin 170 kDa subunit|
          Length = 1276

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = -1

Query: 410 KDGCGACTGKPN----FICLGKQTCAIRTNIC-KSNNQGSMDCSI 291
           K G   CTGK N    ++C  +Q C++R  +C K++    M C +
Sbjct: 510 KRGKEMCTGKTNNCQEYVCDSEQRCSVRDKVCVKTSPYIEMSCYV 554

>SC6A7_RAT (P28573) Sodium-dependent proline transporter (Solute carrier|
           family 6 member 7)
          Length = 637

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
 Frame = -3

Query: 240 LVVRGVEPTTVLALRAVLEREGIPER----PVQQVLLGSPGMAIV----HSTLLPLLPVR 85
           +V  G   T++LA  A+    G   +    PV QV    PG+A V      T+LPL P  
Sbjct: 325 IVTLGNAITSILAGFAIFSVLGYMSQELGVPVDQVAKAGPGLAFVIYPQAMTMLPLSPFW 384

Query: 84  KSVSLYLRGTLGLPANY 34
             +  ++  TLGL + +
Sbjct: 385 SFLFFFMLLTLGLDSQF 401

>SC6A7_MOUSE (Q6PGE7) Sodium-dependent proline transporter (Solute carrier|
           family 6 member 7)
          Length = 637

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
 Frame = -3

Query: 240 LVVRGVEPTTVLALRAVLEREGIPER----PVQQVLLGSPGMAIV----HSTLLPLLPVR 85
           +V  G   T++LA  A+    G   +    PV QV    PG+A V      T+LPL P  
Sbjct: 325 IVTLGNAITSILAGFAIFSVLGYMSQELGVPVDQVAKAGPGLAFVVYPQAMTMLPLSPFW 384

Query: 84  KSVSLYLRGTLGLPANY 34
             +  ++  TLGL + +
Sbjct: 385 SFLFFFMLLTLGLDSQF 401

>Y567_BUCAP (Q8K902) Hypothetical transport protein BUsg567|
          Length = 413

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
 Frame = -1

Query: 293 IGIQLAFSGTDKHESVLNSWY----EVSNLQQYSLYGLYSNVKGSLSGQFNKFF*ALLEW 126
           +G+ +  SG     S+ +SW     +++ +Q  SLY  +  +  S+ G F  FF   L+W
Sbjct: 331 LGLVIFSSGFFASHSIASSWIGFHAKIAKVQATSLYLFFYYLGSSIFGTFGGFFWFYLKW 390

>SC6A7_HUMAN (Q99884) Sodium-dependent proline transporter (Solute carrier|
           family 6 member 7)
          Length = 636

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
 Frame = -3

Query: 240 LVVRGVEPTTVLALRAVLEREGIPER----PVQQVLLGSPGMAIV----HSTLLPLLPVR 85
           +V  G   T++LA  A+    G   +    PV QV    PG+A V      T+LPL P  
Sbjct: 325 IVTLGNAITSILAGFAIFSVLGYMSQELGVPVDQVAKAGPGLAFVVYPQAMTMLPLSPFW 384

Query: 84  KSVSLYLRGTLGLPANY 34
             +  ++  TLGL + +
Sbjct: 385 SFLFFFMLLTLGLDSQF 401

>DHML_METFL (Q50425) Methylamine dehydrogenase light chain precursor (EC|
           1.4.99.3) (MADH)
          Length = 186

 Score = 25.4 bits (54), Expect(2) = 6.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 101 HCCLSGSQCRCT*GEL*VCP 42
           HC + G+ C C  G L  CP
Sbjct: 83  HCSIDGNLCDCCGGSLTSCP 102



 Score = 23.1 bits (48), Expect(2) = 6.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 144 LGSPGMAIVHSTLLPLLPV 88
           +G  G  +V S LLPLLPV
Sbjct: 28  IGKLGGFLVGSALLPLLPV 46

>SYRD_PSESY (P33951) ATP-binding protein syrD|
          Length = 566

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 277 ASWMPMLQSMDPWLLLLQMFVLMAQ--VCLPRQMKFGFPVQAPHP 405
           AS + +L  M P ++L+    ++AQ  +   R   FGF +  PHP
Sbjct: 277 ASVLAVLYIMGPLVMLVSAMPMLAQGRIACTRLADFGFSINEPHP 321

>YRN7_CAEEL (Q09421) Hypothetical protein R07B1.7|
          Length = 238

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 22/92 (23%), Positives = 40/92 (43%)
 Frame = -1

Query: 356 QTCAIRTNICKSNNQGSMDCSIGIQLAFSGTDKHESVLNSWYEVSNLQQYSLYGLYSNVK 177
           QTCAIRT +C + + G  D  +      SG+    +   +    ++  Q++L G++    
Sbjct: 79  QTCAIRTLVCDARSPGG-DVLVSFNRDDSGSTGGPNTFTTILNCNDDMQWTLSGIHQP-- 135

Query: 176 GSLSGQFNKFF*ALLEWPLSIALSCHCCLSGS 81
              S + N  F + L   +      H C++ S
Sbjct: 136 ---SARMNPLFTSALVVLVLFTKRTHACVATS 164

>LEU2_NATPD (Q3IRQ4) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 474

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 416 WKKDGCGACTGKPNFICLGKQTCAIRTNICKSNNQGSMD 300
           W++ GC  C G  +   +G + CA  +N      QGS D
Sbjct: 403 WREAGCSMCLGMNDDQLVGDEACASSSNRNFVGRQGSKD 441

>BUR1_EMENI (Q96VK3) Serine/threonine-protein kinase bur1 (EC 2.7.11.22) (EC|
           2.7.11.23) (Pitalre-like kinase A)
          Length = 544

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -2

Query: 457 WFLNS-TKAGYRTCTGRRTGVVPAQGSQTSSAWASKPAPSGQTSARAITRDP 305
           W  NS ++ G  T   R +    +QG+Q   AW+++P  + Q       +DP
Sbjct: 376 WSTNSGSRTGAETRNPRISSAARSQGNQLRDAWSNEPQQAWQRRGNEELKDP 427

>GLMU_CORGL (Q8NRU8) Bifunctional protein glmU [Includes:|
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (N-acetylglucosamine-1-phosphate uridyltransferase);
           Glucosamine-1-phosphate N-acetyltransferase (EC
           2.3.1.157)]
          Length = 485

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = -3

Query: 303 GLQHRHPAGLLGHGQARVGPQL--VVRGVEPTTVLALRAVLEREGIPERPVQQVLLGSPG 130
           GL   H   ++GHG+ +VGP +  V   ++   ++A++      G   +     L G  G
Sbjct: 47  GLNPEHIVAVIGHGRDQVGPAVAQVAEELDREVLIAIQEEQNGTGHAVQCAMDQLEGFEG 106

Query: 129 MAIVHSTLLPLL 94
             IV +  +PLL
Sbjct: 107 TIIVTNGDVPLL 118


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,407,506
Number of Sequences: 219361
Number of extensions: 1779898
Number of successful extensions: 6050
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6048
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)