ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags31i04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 906 Score = 381 bits (192), Expect = e-102 Identities = 426/504 (84%) Strand = Plus / Minus Query: 124 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 183 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 890 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 831 Query: 184 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 243 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 830 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 771 Query: 244 gctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttg 303 | ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||| Sbjct: 770 tccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttg 711 Query: 304 taaactgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtt 363 || | |||||||||| ||||||| ||||||||||||| ||||||||||||||| | | Sbjct: 710 tacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggct 651 Query: 364 tggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctcca 423 ||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| || Sbjct: 650 tggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccaccg 591 Query: 424 tagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccagca 483 |||||||||||||||||||| |||| ||| || |||||||||||||||||| |||||| Sbjct: 590 tagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaacccagca 531 Query: 484 aatctcttgtcactgtggggaatgtccagaccaccgtccaaagctcccttaagtgcacca 543 || |||||||||||||| |||||||| |||||||| |||||||||||||| || |||||| Sbjct: 530 aacctcttgtcactgtgaggaatgtcaagaccaccatccaaagctcccttgagggcacca 471 Query: 544 aacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacggaaaggc 603 || |||||||||||||| || ||||| || || |||||||||||||| |||||||||||| Sbjct: 470 aagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacggaaaggc 411 Query: 604 ctcctctcatcagcaggctcaaca 627 | ||| |||||||| || |||||| Sbjct: 410 cgcctttcatcagctggttcaaca 387
>dbj|AK104693.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H05, full insert sequence Length = 1219 Score = 381 bits (192), Expect = e-102 Identities = 426/504 (84%) Strand = Plus / Minus Query: 124 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 183 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 986 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 927 Query: 184 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 243 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 926 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 867 Query: 244 gctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttg 303 | ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||| Sbjct: 866 tccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttg 807 Query: 304 taaactgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtt 363 || | |||||||||| ||||||| ||||||||||||| ||||||||||||||| | | Sbjct: 806 tacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggct 747 Query: 364 tggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctcca 423 ||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| || Sbjct: 746 tggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccaccg 687 Query: 424 tagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccagca 483 |||||||||||||||||||| |||| ||| || |||||||||||||||||| |||||| Sbjct: 686 tagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaacccagca 627 Query: 484 aatctcttgtcactgtggggaatgtccagaccaccgtccaaagctcccttaagtgcacca 543 || |||||||||||||| |||||||| |||||||| |||||||||||||| || |||||| Sbjct: 626 aacctcttgtcactgtgaggaatgtcaagaccaccatccaaagctcccttgagggcacca 567 Query: 544 aacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacggaaaggc 603 || |||||||||||||| || ||||| || || |||||||||||||| |||||||||||| Sbjct: 566 aagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacggaaaggc 507 Query: 604 ctcctctcatcagcaggctcaaca 627 | ||| |||||||| || |||||| Sbjct: 506 cgcctttcatcagctggttcaaca 483
>gb|AY109375.1| Zea mays CL457_2 mRNA sequence Length = 1397 Score = 381 bits (192), Expect = e-102 Identities = 396/464 (85%) Strand = Plus / Minus Query: 165 gttgagcctctcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 224 ||||||||| || | ||||||||||||||||| ||| || || ||||||||||||||||| Sbjct: 933 gttgagcctttcaatgaggctggccttcctctgctcatatgtcagcttcttggggttgta 874 Query: 225 cctcttgtgagtcttgggagctggcttggttgatttggccatgctaggatcagcgcggat 284 |||||| || ||| || | |||||||||| ||| | ||| ||||||||| ||||| Sbjct: 873 cctcttatgctcctttggtggctgcttggttgacttgacaatggaaggatcagcacggat 814 Query: 285 ggcagcgtgaaccttcttgtaaactgcttccatgtcatcagctgagattcccttcttgat 344 |||||| || ||||||||||| | ||||||||||||||||| ||||||||||| || Sbjct: 813 ggcagcatggaccttcttgtacagagcttccatgtcatcagcctcaattcccttcttaat 754 Query: 345 gtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgta 404 ||||||||||||||||| ||||||||||| || ||||| || || || ||||||||| Sbjct: 753 gtactcactgaagtgagactggtacttctctggctcctcttcagcgaggttcctcatgta 694 Query: 405 gtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccagagacttctc 464 |||||||||||| || ||||||||||||||||| || || ||||||||||| ||| || Sbjct: 693 gtcagcaacatggccaccatagatgtacttgcgatggatatcagcatccagctgcttgtc 634 Query: 465 gtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaa 524 |||||||||||||||||||| ||||| || ||||| ||||| ||||| ||||| ||||| Sbjct: 633 atccttcttgaaaccagcaaacctcttctcgctgtgaggaatatccaggccaccatccaa 574 Query: 525 agctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 584 ||||||||| || |||||||| |||||||| ||||| |||||||| ||||| |||||||| Sbjct: 573 agctcccttgagggcaccaaagacacggttcccagttgtagtcctaataaggccaacatc 514 Query: 585 caagagcgcacggaaaggcctcctctcatcagcaggctcaacag 628 |||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 513 caagagagcacggaaaggcctcctctcatcagctggctcaacag 470
>ref|NM_190269.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 915 Score = 367 bits (185), Expect = 3e-98 Identities = 386/453 (85%) Strand = Plus / Minus Query: 175 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtga 234 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| |||||||| Sbjct: 848 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgtatctcttgtgg 789 Query: 235 gtcttgggagctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtga 294 || || | |||||| |||||||||||| ||||||| |||||||||||||| || Sbjct: 788 gtagccggttccttcttggtcgatttggccatggtaggatcggcgcggatggcagcatgg 729 Query: 295 accttcttgtaaactgcttccatgtcatcagctgagattcccttcttgatgtactcactg 354 ||||||||||| | || ||||||| ||||||| ||||||||||||| ||||||||| Sbjct: 728 accttcttgtacagtgattccatgccatcagcgtcaattcccttcttgaggtactcacta 669 Query: 355 aagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaaca 414 ||||| | |||| | ||||| |||||||| || || | ||||||||||||||||| || Sbjct: 668 aagtgggcttggaatttctcaggttcctcctcagccatagacctcatgtagtcagccacg 609 Query: 415 tgccctccatagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttg 474 ||||| || |||||||||||||||||||| |||| ||| || |||||||||||||||| Sbjct: 608 tgcccaccgtagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttg 549 Query: 475 aaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctta 534 || |||||||| |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 548 aacccagcaaacctcttgtcactgtgaggaatgtcaagaccaccatccaaagctcccttg 489 Query: 535 agtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgca 594 || |||||||| |||||||||||||| || ||||| || || |||||||||||||| ||| Sbjct: 488 agggcaccaaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagca 429 Query: 595 cggaaaggcctcctctcatcagcaggctcaaca 627 |||||||||||||| |||||||| || |||||| Sbjct: 428 cggaaaggcctcctttcatcagctggttcaaca 396
>emb|X64622.1|OS5SRRNMR O.sativa Rrl5 mRNA for 5S ribosomal RNA Length = 1114 Score = 367 bits (185), Expect = 3e-98 Identities = 426/505 (84%), Gaps = 1/505 (0%) Strand = Plus / Minus Query: 124 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 183 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 900 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 841 Query: 184 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 243 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 840 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 781 Query: 244 gctggcttggttgatttggccatgctagg-atcagcgcggatggcagcgtgaaccttctt 302 | ||||||||||||||||||| |||| |||||| ||||||||||| || |||||||| Sbjct: 780 tccttcttggttgatttggccatggtagggatcagcacggatggcagcatggaccttctt 721 Query: 303 gtaaactgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagt 362 ||| | |||||||||| ||||||| ||||||||||||| ||||||||||||||| | Sbjct: 720 gtacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggc 661 Query: 363 ttggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctcc 422 |||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| || Sbjct: 660 ttggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccacc 601 Query: 423 atagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccagc 482 |||||||||||||||||||| |||| ||| || |||||||||||||||||| ||||| Sbjct: 600 gtagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaacccagc 541 Query: 483 aaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctcccttaagtgcacc 542 ||| |||||||||||||| |||||||| |||||||| |||||||||||||| || ||||| Sbjct: 540 aaacctcttgtcactgtgaggaatgtcaagaccaccatccaaagctcccttgagggcacc 481 Query: 543 aaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacggaaagg 602 ||| |||||||||||||| || ||||| || || |||||||||||||| ||||||||||| Sbjct: 480 aaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacggaaagg 421 Query: 603 cctcctctcatcagcaggctcaaca 627 || ||| |||||||| || |||||| Sbjct: 420 ccgcctttcatcagctggttcaaca 396
>gb|BT016492.1| Zea mays clone Contig325 mRNA sequence Length = 1365 Score = 365 bits (184), Expect = 1e-97 Identities = 394/464 (84%) Strand = Plus / Minus Query: 165 gttgagcctctcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 224 ||||||||| || | ||| ||||||||||||| |||||| || || |||||||||||||| Sbjct: 917 gttgagcctttcaatgagactggccttcctctgctcgtatgtcagtttcttggggttgta 858 Query: 225 cctcttgtgagtcttgggagctggcttggttgatttggccatgctaggatcagcgcggat 284 ||||||||| ||| || | |||||||||| ||| ||| ||||||||| ||||| Sbjct: 857 cctcttgtgctcctttggtggctgcttggttgacttgaccacagaaggatcagcacggat 798 Query: 285 ggcagcgtgaaccttcttgtaaactgcttccatgtcatcagctgagattcccttcttgat 344 |||||| || ||||||||||| | ||||||||||| ||||| ||||||||||| || Sbjct: 797 ggcagcatggaccttcttgtacagagcttccatgtcgtcagcctcaattcccttcttaat 738 Query: 345 gtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgta 404 ||||||||||||||||| ||||||||||| || ||||| || || || ||||||||| Sbjct: 737 gtactcactgaagtgagactggtacttctctggctcctcttcagcgaggttcctcatgta 678 Query: 405 gtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccagagacttctc 464 |||||||||||| || ||||||||||||||||| || || ||||||||||| ||| || Sbjct: 677 gtcagcaacatggccaccatagatgtacttgcgatggatatcagcatccagctgcttgtc 618 Query: 465 gtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaa 524 |||||||||||||||||||| ||||| || ||||| ||||| ||||| ||||| ||||| Sbjct: 617 atccttcttgaaaccagcaaacctcttctcgctgtgaggaatatccaggccaccatccaa 558 Query: 525 agctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 584 ||||||||| || |||||||| |||||||| ||||| |||||||| ||||| |||||||| Sbjct: 557 agctcccttgagggcaccaaagacacggttcccagttgtagtcctaataaggccaacatc 498 Query: 585 caagagcgcacggaaaggcctcctctcatcagcaggctcaacag 628 |||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 497 caagagagcacggaaaggcctcctctcatcagctggctcaacag 454
>dbj|AK065268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002K21, full insert sequence Length = 1219 Score = 365 bits (184), Expect = 1e-97 Identities = 425/504 (84%), Gaps = 1/504 (0%) Strand = Plus / Minus Query: 124 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 183 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 986 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgac-aga 928 Query: 184 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 243 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 927 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 868 Query: 244 gctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttg 303 | ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||| Sbjct: 867 tccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttg 808 Query: 304 taaactgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtt 363 || | |||||||||| ||||||| ||||||||||||| ||||||||||||||| | | Sbjct: 807 tacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggct 748 Query: 364 tggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctcca 423 ||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| || Sbjct: 747 tggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccaccg 688 Query: 424 tagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccagca 483 |||||||||||||||||||| ||| ||| || |||||||||||||||||| |||||| Sbjct: 687 tagatgtacttgcggtgaataccagaatcaagctgcttctcgtccttcttgaacccagca 628 Query: 484 aatctcttgtcactgtggggaatgtccagaccaccgtccaaagctcccttaagtgcacca 543 || |||||||||||||| |||||||| |||||||| |||||||||||||| || |||||| Sbjct: 627 aacctcttgtcactgtgaggaatgtcaagaccaccatccaaagctcccttgagggcacca 568 Query: 544 aacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacggaaaggc 603 || |||||||||||||| || ||||| || || |||||||||||||| |||||||||||| Sbjct: 567 aagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacggaaaggc 508 Query: 604 ctcctctcatcagcaggctcaaca 627 | ||| |||||||| || |||||| Sbjct: 507 cgcctttcatcagctggttcaaca 484
>gb|BT016417.1| Zea mays clone Contig250 mRNA sequence Length = 1212 Score = 278 bits (140), Expect = 2e-71 Identities = 383/464 (82%) Strand = Plus / Minus Query: 165 gttgagcctctcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 224 ||||||||| || | ||||||||||||||||| ||| || || ||||||||||||||||| Sbjct: 932 gttgagcctttcaatgaggctggccttcctctgctcatatgtcagcttcttggggttgta 873 Query: 225 cctcttgtgagtcttgggagctggcttggttgatttggccatgctaggatcagcgcggat 284 |||||| || ||| || | |||||||||| || | ||| |||||| || ||||| Sbjct: 872 cctcttatgctcctttggtggctgcttggttgacttaacaatggaaggatcggcacggat 813 Query: 285 ggcagcgtgaaccttcttgtaaactgcttccatgtcatcagctgagattcccttcttgat 344 |||||| || ||||||||||| | ||||| || |||||||| | ||||||||| || Sbjct: 812 ggcagcatggaccttcttgtacagcgcttctatttcatcagcctcaactcccttcttaat 753 Query: 345 gtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgta 404 |||| |||||||||| | |||||||| || || ||||| || || || | ||||||| Sbjct: 752 gtacgcactgaagtggctctggtacttttctggctcctcttcagcaaggttcttcatgta 693 Query: 405 gtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccagagacttctc 464 |||||||||||| || |||||||||||| ||||||| | |||||||||| ||| || Sbjct: 692 gtcagcaacatggccaccatagatgtacctgcggtgggtatcagcatccaactgcttgtc 633 Query: 465 gtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaa 524 |||||||||||| |||||||| ||||| || ||||| ||||| ||||| || || ||||| Sbjct: 632 gtccttcttgaatccagcaaacctcttctcgctgtgaggaatatccaggcctccatccaa 573 Query: 525 agctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 584 |||||||| || |||||||| |||||||| || || |||||||||||||| |||||||| Sbjct: 572 tgctcccttgagggcaccaaagacacggttccctgttgtagtcctgataaggccaacatc 513 Query: 585 caagagcgcacggaaaggcctcctctcatcagcaggctcaacag 628 |||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 512 caagagagcacggaaaggcctcctctcatcagctggctcaacag 469
>gb|AY106024.1| Zea mays PCO063168 mRNA sequence Length = 620 Score = 228 bits (115), Expect = 2e-56 Identities = 250/295 (84%) Strand = Plus / Minus Query: 334 cccttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagc 393 ||||||||||||||||| |||||||||| |||||||||||||| |||||||| || || Sbjct: 587 cccttcttgatgtactcgctgaagtgagcctggtacttctcgggctcctcatcagccaga 528 Query: 394 gacctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcc 453 | |||| || ||||||||||| ||||||||||||||||| || || ||||||||| Sbjct: 527 ttcttcatatactcagcaacatggagaccatagatgtacttgcgatggatatcagcatcc 468 Query: 454 agagacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccaga 513 || ||| || ||||||||||| |||||||| ||||| || ||||| ||||| || ||| Sbjct: 467 agctgcttatcatccttcttgaagccagcaaacctcttatcgctgtgaggaatatctaga 408 Query: 514 ccaccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgata 573 ||||| |||||||||||||| || |||||||| |||||||||||||| |||||||| ||| Sbjct: 407 ccaccatccaaagctcccttgagggcaccaaagacacggtttccagtagtagtcctaata 348 Query: 574 agaccaacatccaagagcgcacggaaaggcctcctctcatcagcaggctcaacag 628 || || ||||| ||||| |||||||||||||||||||| || || ||||| |||| Sbjct: 347 aggccgacatctaagagggcacggaaaggcctcctctcttccgctggctcgacag 293
>ref|NM_123336.3| Arabidopsis thaliana 5S rRNA binding / structural constituent of ribosome AT5G39740 mRNA, complete cds Length = 1223 Score = 161 bits (81), Expect = 3e-36 Identities = 117/129 (90%) Strand = Plus / Minus Query: 474 gaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctt 533 ||||||||||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 588 gaaaccagcaaatctcttgtcactgtgagggatatcaagacctccgtccaaagctccctt 529 Query: 534 aagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgc 593 |||||||||||||||||||||||||| |||||||||||||| |||||||| | || || Sbjct: 528 gagtgcaccaaacacacggtttccagtggtagtcctgataagtccaacatcaagaagagc 469 Query: 594 acggaaagg 602 ||||||||| Sbjct: 468 acggaaagg 460
>gb|BT008706.1| Arabidopsis thaliana At5g39740 gene, complete cds Length = 906 Score = 161 bits (81), Expect = 3e-36 Identities = 117/129 (90%) Strand = Plus / Minus Query: 474 gaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctt 533 ||||||||||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 546 gaaaccagcaaatctcttgtcactgtgagggatatcaagacctccgtccaaagctccctt 487 Query: 534 aagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgc 593 |||||||||||||||||||||||||| |||||||||||||| |||||||| | || || Sbjct: 486 gagtgcaccaaacacacggtttccagtggtagtcctgataagtccaacatcaagaagagc 427 Query: 594 acggaaagg 602 ||||||||| Sbjct: 426 acggaaagg 418
>gb|AY093123.1| Arabidopsis thaliana ribosomal protein L5 - like (At5g39740) mRNA, complete cds Length = 1100 Score = 161 bits (81), Expect = 3e-36 Identities = 117/129 (90%) Strand = Plus / Minus Query: 474 gaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctt 533 ||||||||||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 576 gaaaccagcaaatctcttgtcactgtgagggatatcaagacctccgtccaaagctccctt 517 Query: 534 aagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgc 593 |||||||||||||||||||||||||| |||||||||||||| |||||||| | || || Sbjct: 516 gagtgcaccaaacacacggtttccagtggtagtcctgataagtccaacatcaagaagagc 457 Query: 594 acggaaagg 602 ||||||||| Sbjct: 456 acggaaagg 448
>gb|AY079020.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, complete cds Length = 1128 Score = 161 bits (81), Expect = 3e-36 Identities = 117/129 (90%) Strand = Plus / Minus Query: 474 gaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctt 533 ||||||||||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 588 gaaaccagcaaatctcttgtcactgtgagggatatcaagacctccgtccaaagctccctt 529 Query: 534 aagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgc 593 |||||||||||||||||||||||||| |||||||||||||| |||||||| | || || Sbjct: 528 gagtgcaccaaacacacggtttccagtggtagtcctgataagtccaacatcaagaagagc 469 Query: 594 acggaaagg 602 ||||||||| Sbjct: 468 acggaaagg 460
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 153 bits (77), Expect = 8e-34 Identities = 122/137 (89%) Strand = Plus / Minus Query: 396 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 455 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 38968845 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 38968786 Query: 456 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacc 515 |||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 38968785 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgtgaggaatgtcaagacc 38968726 Query: 516 accgtccaaagctccct 532 ||| ||||||||||||| Sbjct: 38968725 accatccaaagctccct 38968709 Score = 153 bits (77), Expect = 8e-34 Identities = 122/137 (89%) Strand = Plus / Minus Query: 396 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 455 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 38963527 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 38963468 Query: 456 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacc 515 |||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 38963467 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgtgaggaatgtcaagacc 38963408 Query: 516 accgtccaaagctccct 532 ||| ||||||||||||| Sbjct: 38963407 accatccaaagctccct 38963391 Score = 133 bits (67), Expect = 8e-28 Identities = 118/135 (87%) Strand = Plus / Minus Query: 249 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 308 ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||||| | Sbjct: 38969192 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 38969133 Query: 309 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 368 |||||||||| ||||||| ||||||||||||| ||||||||||||||| | |||| | Sbjct: 38969132 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggcttggaa 38969073 Query: 369 cttctcgggttcctc 383 ||||| |||||||| Sbjct: 38969072 tttctcaggttcctc 38969058 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Minus Query: 249 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 308 |||||| |||||||||||| ||||||| |||||||||||||| || ||||||||||| | Sbjct: 38963860 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 38963801 Query: 309 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 368 || ||||||| ||||||| ||||||||||||| ||||||||| ||||| | |||| | Sbjct: 38963800 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtgggcttggaa 38963741 Query: 369 cttctcgggttcctc 383 ||||| |||||||| Sbjct: 38963740 tttctcaggttcctc 38963726 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Minus Query: 538 gcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacgg 597 |||||||| |||||||||||||| || ||||| || || |||||||||||||| |||||| Sbjct: 38963221 gcaccaaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacgg 38963162 Query: 598 aaaggcctcctctcatcagcaggctcaaca 627 ||||||||||| |||||||| || |||||| Sbjct: 38963161 aaaggcctcctttcatcagctggttcaaca 38963132 Score = 91.7 bits (46), Expect = 3e-15 Identities = 79/90 (87%) Strand = Plus / Minus Query: 538 gcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacgg 597 |||||||| |||||||||||||| || ||||| || || |||||||||||||| |||||| Sbjct: 38968537 gcaccaaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacgg 38968478 Query: 598 aaaggcctcctctcatcagcaggctcaaca 627 ||||||| ||| |||||||| || |||||| Sbjct: 38968477 aaaggccgcctttcatcagctggttcaaca 38968448 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 175 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 224 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| Sbjct: 38964020 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgta 38963971 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 124 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 183 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 38969401 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 38969342 Query: 184 ctggccttcctctcctcgtaggtgagcttcttggggttgta 224 ||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 38969341 ctggccttcctctgttcgtaggttagcttcttgaggttgta 38969301
>emb|BX831866.1|CNS09ZT2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH35ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1048 Score = 153 bits (77), Expect = 8e-34 Identities = 116/129 (89%) Strand = Plus / Minus Query: 474 gaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctt 533 ||||||||||||||||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 565 gaaaccagcaaatctcttgtcactgtgagggatatcaagacctccgtccaaagctccctt 506 Query: 534 aagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgc 593 ||| |||||||||||||||||||||| |||||||||||||| |||||||| | || || Sbjct: 505 gagttcaccaaacacacggtttccagtggtagtcctgataagtccaacatcaagaagagc 446 Query: 594 acggaaagg 602 ||||||||| Sbjct: 445 acggaaagg 437
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 153 bits (77), Expect = 8e-34 Identities = 122/137 (89%) Strand = Plus / Minus Query: 396 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 455 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 42478 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 42419 Query: 456 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacc 515 |||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 42418 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgtgaggaatgtcaagacc 42359 Query: 516 accgtccaaagctccct 532 ||| ||||||||||||| Sbjct: 42358 accatccaaagctccct 42342 Score = 153 bits (77), Expect = 8e-34 Identities = 122/137 (89%) Strand = Plus / Minus Query: 396 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 455 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 37160 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 37101 Query: 456 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacc 515 |||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 37100 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgtgaggaatgtcaagacc 37041 Query: 516 accgtccaaagctccct 532 ||| ||||||||||||| Sbjct: 37040 accatccaaagctccct 37024 Score = 133 bits (67), Expect = 8e-28 Identities = 118/135 (87%) Strand = Plus / Minus Query: 249 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 308 ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||||| | Sbjct: 42825 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 42766 Query: 309 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 368 |||||||||| ||||||| ||||||||||||| ||||||||||||||| | |||| | Sbjct: 42765 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggcttggaa 42706 Query: 369 cttctcgggttcctc 383 ||||| |||||||| Sbjct: 42705 tttctcaggttcctc 42691 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Minus Query: 249 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 308 |||||| |||||||||||| ||||||| |||||||||||||| || ||||||||||| | Sbjct: 37493 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 37434 Query: 309 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 368 || ||||||| ||||||| ||||||||||||| ||||||||| ||||| | |||| | Sbjct: 37433 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtgggcttggaa 37374 Query: 369 cttctcgggttcctc 383 ||||| |||||||| Sbjct: 37373 tttctcaggttcctc 37359 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Minus Query: 538 gcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacgg 597 |||||||| |||||||||||||| || ||||| || || |||||||||||||| |||||| Sbjct: 36854 gcaccaaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacgg 36795 Query: 598 aaaggcctcctctcatcagcaggctcaaca 627 ||||||||||| |||||||| || |||||| Sbjct: 36794 aaaggcctcctttcatcagctggttcaaca 36765 Score = 91.7 bits (46), Expect = 3e-15 Identities = 79/90 (87%) Strand = Plus / Minus Query: 538 gcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacgg 597 |||||||| |||||||||||||| || ||||| || || |||||||||||||| |||||| Sbjct: 42170 gcaccaaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacgg 42111 Query: 598 aaaggcctcctctcatcagcaggctcaaca 627 ||||||| ||| |||||||| || |||||| Sbjct: 42110 aaaggccgcctttcatcagctggttcaaca 42081 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 175 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 224 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| Sbjct: 37653 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgta 37604 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 124 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 183 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 43034 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 42975 Query: 184 ctggccttcctctcctcgtaggtgagcttcttggggttgta 224 ||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 42974 ctggccttcctctgttcgtaggttagcttcttgaggttgta 42934
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 153 bits (77), Expect = 8e-34 Identities = 122/137 (89%) Strand = Plus / Minus Query: 396 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 455 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 133631 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 133572 Query: 456 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacc 515 |||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 133571 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgtgaggaatgtcaagacc 133512 Query: 516 accgtccaaagctccct 532 ||| ||||||||||||| Sbjct: 133511 accatccaaagctccct 133495 Score = 153 bits (77), Expect = 8e-34 Identities = 122/137 (89%) Strand = Plus / Minus Query: 396 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 455 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 128313 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 128254 Query: 456 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacc 515 |||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 128253 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgtgaggaatgtcaagacc 128194 Query: 516 accgtccaaagctccct 532 ||| ||||||||||||| Sbjct: 128193 accatccaaagctccct 128177 Score = 133 bits (67), Expect = 8e-28 Identities = 118/135 (87%) Strand = Plus / Minus Query: 249 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 308 ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||||| | Sbjct: 133978 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 133919 Query: 309 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 368 |||||||||| ||||||| ||||||||||||| ||||||||||||||| | |||| | Sbjct: 133918 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtgggcttggaa 133859 Query: 369 cttctcgggttcctc 383 ||||| |||||||| Sbjct: 133858 tttctcaggttcctc 133844 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Minus Query: 249 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 308 |||||| |||||||||||| ||||||| |||||||||||||| || ||||||||||| | Sbjct: 128646 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 128587 Query: 309 tgcttccatgtcatcagctgagattcccttcttgatgtactcactgaagtgagtttggta 368 || ||||||| ||||||| ||||||||||||| ||||||||| ||||| | |||| | Sbjct: 128586 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtgggcttggaa 128527 Query: 369 cttctcgggttcctc 383 ||||| |||||||| Sbjct: 128526 tttctcaggttcctc 128512 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Minus Query: 538 gcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacgg 597 |||||||| |||||||||||||| || ||||| || || |||||||||||||| |||||| Sbjct: 128007 gcaccaaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacgg 127948 Query: 598 aaaggcctcctctcatcagcaggctcaaca 627 ||||||||||| |||||||| || |||||| Sbjct: 127947 aaaggcctcctttcatcagctggttcaaca 127918 Score = 91.7 bits (46), Expect = 3e-15 Identities = 79/90 (87%) Strand = Plus / Minus Query: 538 gcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacgg 597 |||||||| |||||||||||||| || ||||| || || |||||||||||||| |||||| Sbjct: 133323 gcaccaaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacgg 133264 Query: 598 aaaggcctcctctcatcagcaggctcaaca 627 ||||||| ||| |||||||| || |||||| Sbjct: 133263 aaaggccgcctttcatcagctggttcaaca 133234 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 175 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 224 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| Sbjct: 128806 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgta 128757 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 124 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 183 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 134187 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 134128 Query: 184 ctggccttcctctcctcgtaggtgagcttcttggggttgta 224 ||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 134127 ctggccttcctctgttcgtaggttagcttcttgaggttgta 134087
>emb|BX832617.1|CNS09YMN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH85ZA07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1060 Score = 135 bits (68), Expect = 2e-28 Identities = 113/128 (88%) Strand = Plus / Minus Query: 474 gaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctt 533 |||||||||||||||||| ||||| || || || || ||||| ||||||||||||||||| Sbjct: 573 gaaaccagcaaatctcttttcactttgagggatatcaagacctccgtccaaagctccctt 514 Query: 534 aagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgc 593 ||||||||||||||||| |||||||| |||||||||||||| |||||||| | || || Sbjct: 513 gagtgcaccaaacacacgttttccagtggtagtcctgataagtccaacatcaagaagagc 454 Query: 594 acggaaag 601 |||||||| Sbjct: 453 acggaaag 446
>gb|AY365248.1| Cucumis sativus 60S ribosomal protein L5 mRNA, complete cds Length = 1171 Score = 131 bits (66), Expect = 3e-27 Identities = 114/130 (87%) Strand = Plus / Minus Query: 476 aaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctcccttaa 535 |||||||||| |||||||||||||| |||||||||| ||||| |||||||||||||| | Sbjct: 565 aaccagcaaacctcttgtcactgtgaggaatgtccaatccaccatccaaagctcccttca 506 Query: 536 gtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcac 595 | |||||||| || ||||||||||| ||||| |||||||| |||||||| | ||| |||| Sbjct: 505 gagcaccaaaaacgcggtttccagttgtagttctgataagcccaacatcaaggagagcac 446 Query: 596 ggaaaggcct 605 |||| ||||| Sbjct: 445 ggaatggcct 436 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 334 cccttcttgatgtactcactgaagtgagtttggtacttctcgggttc 380 ||||||||||||||||| |||||||||| ||| || ||||| ||||| Sbjct: 707 cccttcttgatgtactcgctgaagtgagattgatatttctcaggttc 661
>ref|NM_113448.2| Arabidopsis thaliana ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); structural constituent of ribosome AT3G25520 (ATL5) mRNA, complete cds Length = 1254 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 337 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 396 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 745 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 686 Query: 397 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 456 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 685 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 626 Query: 457 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 516 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 625 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 566 Query: 517 ccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataaga 576 || |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 565 ccatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataagt 506 Query: 577 ccaacatccaagagcgcacggaaaggcctcct 608 |||||||| | || ||||||||||| ||||| Sbjct: 505 ccaacatcaagaagagcacggaaaggtctcct 474 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 189 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 233 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 893 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 849
>gb|BT000411.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA, complete cds Length = 969 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 337 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 396 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 683 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 624 Query: 397 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 456 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 623 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 564 Query: 457 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 516 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 563 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 504 Query: 517 ccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataaga 576 || |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 503 ccatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataagt 444 Query: 577 ccaacatccaagagcgcacggaaaggcctcct 608 |||||||| | || ||||||||||| ||||| Sbjct: 443 ccaacatcaagaagagcacggaaaggtctcct 412 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 189 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 233 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>gb|BT008705.1| Arabidopsis thaliana At3g25520 gene, complete cds Length = 906 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 337 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 396 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 683 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 624 Query: 397 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 456 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 623 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 564 Query: 457 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 516 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 563 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 504 Query: 517 ccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataaga 576 || |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 503 ccatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataagt 444 Query: 577 ccaacatccaagagcgcacggaaaggcctcct 608 |||||||| | || ||||||||||| ||||| Sbjct: 443 ccaacatcaagaagagcacggaaaggtctcct 412 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 189 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 233 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>gb|AY136319.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA, complete cds Length = 1161 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 337 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 396 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 742 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 683 Query: 397 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 456 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 682 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 623 Query: 457 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 516 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 622 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 563 Query: 517 ccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataaga 576 || |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 562 ccatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataagt 503 Query: 577 ccaacatccaagagcgcacggaaaggcctcct 608 |||||||| | || ||||||||||| ||||| Sbjct: 502 ccaacatcaagaagagcacggaaaggtctcct 471 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 189 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 233 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 890 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 846
>gb|AY065103.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA, complete cds Length = 1151 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 337 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 396 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 740 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 681 Query: 397 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 456 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 680 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 621 Query: 457 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 516 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 620 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 561 Query: 517 ccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataaga 576 || |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 560 ccatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataagt 501 Query: 577 ccaacatccaagagcgcacggaaaggcctcct 608 |||||||| | || ||||||||||| ||||| Sbjct: 500 ccaacatcaagaagagcacggaaaggtctcct 469 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 189 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 233 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 888 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 844
>gb|AY081701.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA, complete cds Length = 925 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 337 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 396 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 683 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 624 Query: 397 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 456 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 623 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 564 Query: 457 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 516 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 563 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 504 Query: 517 ccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataaga 576 || |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 503 ccatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataagt 444 Query: 577 ccaacatccaagagcgcacggaaaggcctcct 608 |||||||| | || ||||||||||| ||||| Sbjct: 443 ccaacatcaagaagagcacggaaaggtctcct 412 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 189 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 233 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>gb|AY054161.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, complete cds Length = 1108 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 337 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 396 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 730 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 671 Query: 397 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 456 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 670 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 611 Query: 457 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 516 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 610 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 551 Query: 517 ccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataaga 576 || |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 550 ccatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataagt 491 Query: 577 ccaacatccaagagcgcacggaaaggcctcct 608 |||||||| | || ||||||||||| ||||| Sbjct: 490 ccaacatcaagaagagcacggaaaggtctcct 459 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 189 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 233 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 878 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 834
>gb|AY186611.1| Arabidopsis thaliana ribosomal protein L5 mRNA, complete cds Length = 906 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 337 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 396 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 683 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 624 Query: 397 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 456 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 623 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 564 Query: 457 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 516 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 563 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 504 Query: 517 ccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataaga 576 || |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 503 ccatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataagt 444 Query: 577 ccaacatccaagagcgcacggaaaggcctcct 608 |||||||| | || ||||||||||| ||||| Sbjct: 443 ccaacatcaagaagagcacggaaaggtctcct 412 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 189 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 233 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>emb|BX823967.1|CNS0A6W1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1076 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 337 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 396 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 715 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 656 Query: 397 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 456 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 655 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 596 Query: 457 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 516 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 595 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 536 Query: 517 ccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataaga 576 || |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 535 ccatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataagt 476 Query: 577 ccaacatccaagagcgcacggaaaggcctcct 608 |||||||| | || ||||||||||| ||||| Sbjct: 475 ccaacatcaagaagagcacggaaaggtctcct 444 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 189 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 233 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 863 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 819
>gb|AY087197.1| Arabidopsis thaliana clone 32753 mRNA, complete sequence Length = 1248 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 337 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 396 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 745 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 686 Query: 397 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 456 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 685 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 626 Query: 457 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 516 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 625 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 566 Query: 517 ccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataaga 576 || |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 565 ccatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataagt 506 Query: 577 ccaacatccaagagcgcacggaaaggcctcct 608 |||||||| | || ||||||||||| ||||| Sbjct: 505 ccaacatcaagaagagcacggaaaggtctcct 474 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 189 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 233 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 893 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 849
>gb|BT002427.1| Arabidopsis thaliana ribosomal protein, putative (At3g25520) mRNA, complete cds Length = 1117 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 337 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 396 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 740 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 681 Query: 397 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 456 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 680 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 621 Query: 457 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 516 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 620 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 561 Query: 517 ccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataaga 576 || |||||||| |||||||| ||||| |||||||||||||| || || ||||||||||| Sbjct: 560 ccatccaaagcacccttaagagcaccgaacacacggtttcctgttgtggtcctgataagt 501 Query: 577 ccaacatccaagagcgcacggaaaggcctcct 608 |||||||| | || ||||||||||| ||||| Sbjct: 500 ccaacatcaagaagagcacggaaaggtctcct 469 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 189 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 233 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 888 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 844
>gb|BT014015.1| Lycopersicon esculentum clone 133077F, mRNA sequence Length = 1274 Score = 119 bits (60), Expect = 1e-23 Identities = 165/200 (82%) Strand = Plus / Minus Query: 409 gcaacatgccctccatagatgtacttgcggtgaatctcagcatccagagacttctcgtcc 468 |||||||| || ||||| || ||||||||||||| ||||||||| || ||| || Sbjct: 722 gcaacatggccaccatatatatacttgcggtgaacctcagcatcaagttgcttggaatct 663 Query: 469 ttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagct 528 || |||| |||||||| ||||| |||| || ||||| || || ||||| ||||| || Sbjct: 662 ttgctgaatccagcaaacctcttctcaccatgaggaatatcaagtccaccatccaatgca 603 Query: 529 cccttaagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaag 588 ||||| || |||||||||||||| |||||||| ||||| || |||||||||||||||||| Sbjct: 602 cccttgagagcaccaaacacacgatttccagtagtagttctaataagaccaacatccaag 543 Query: 589 agcgcacggaaaggcctcct 608 || ||||||||||||||||| Sbjct: 542 agagcacggaaaggcctcct 523
>dbj|AB049724.1| Pisum sativum ssa-15 mRNA for putative senescence-associated protein, complete cds Length = 1100 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 475 aaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccctta 534 ||||||||||| || ||||||||||| ||||| |||| ||| || |||||||||||||| Sbjct: 607 aaaccagcaaaccttttgtcactgtgaggaatatccaaacctccatccaaagctcccttg 548 Query: 535 agtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgca 594 |||||||||||||||||||| || || || ||| | | | ||||||||| | || ||| Sbjct: 547 agtgcaccaaacacacggttaccggttgtggtcttaaccaaaccaacatcaagaagagca 488 Query: 595 cggaaaggcctcct 608 |||||||||||||| Sbjct: 487 cggaaaggcctcct 474 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 205 gtgagcttcttggggttgtacctcttgtg 233 ||||||||||| |||||||||||||||| Sbjct: 877 gtgagcttcttcaggttgtacctcttgtg 849 Score = 40.1 bits (20), Expect = 8.6 Identities = 65/80 (81%) Strand = Plus / Minus Query: 286 gcagcgtgaaccttcttgtaaactgcttccatgtcatcagctgagattcccttcttgatg 345 ||||| |||||||||||||||| | | || || |||||||| || || |||||||| Sbjct: 796 gcagcatgaaccttcttgtaaagttcctcaattccatcagcttctatccctttcttgata 737 Query: 346 tactcactgaagtgagtttg 365 || | ||||||||||||||| Sbjct: 736 tattgactgaagtgagtttg 717
>dbj|AB016876.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKM21 Length = 44499 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 530 ccttaagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaaga 589 |||| |||||||||||||||||||||||||| |||||||||||||| |||||||| | | Sbjct: 8034 ccttgagtgcaccaaacacacggtttccagtggtagtcctgataagtccaacatcaagaa 7975 Query: 590 gcgcacggaaagg 602 | ||||||||||| Sbjct: 7974 gagcacggaaagg 7962 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 474 gaaaccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccct 532 ||||||||||||||||||||||||||| || || || ||||| |||||||||||||||| Sbjct: 8206 gaaaccagcaaatctcttgtcactgtgagggatatcaagacctccgtccaaagctccct 8148
>emb|X95566.1|PS5SRNA P.sativum 5S rRNA gene Length = 1115 Score = 77.8 bits (39), Expect = 4e-11 Identities = 86/98 (87%), Gaps = 4/98 (4%) Strand = Plus / Minus Query: 459 cttctcgtccttcttg--aaaccagcaaatctcttgtcactgtggggaatgtccagacca 516 |||||||||||| ||| ||||||||||| |||||||||||||| ||||| |||| ||| Sbjct: 570 cttctcgtccttgttgcaaaaccagcaaacctcttgtcactgtgaggaatatccaaacct 511 Query: 517 ccgtccaaagc-tcccttaagtg-caccaaacacacgg 552 || |||||||| |||||| |||| |||||||||||||| Sbjct: 510 ccatccaaagcttcccttgagtgtcaccaaacacacgg 473
>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2 Length = 84896 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 530 ccttaagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaaga 589 ||||||| ||||| |||||||||||||| || || ||||||||||| |||||||| | | Sbjct: 56962 ccttaagagcaccgaacacacggtttcctgttgtggtcctgataagtccaacatcaagaa 57021 Query: 590 gcgcacggaaaggcctcct 608 | ||||||||||| ||||| Sbjct: 57022 gagcacggaaaggtctcct 57040 Score = 63.9 bits (32), Expect = 6e-07 Identities = 155/196 (79%) Strand = Plus / Plus Query: 337 ttcttgatgtactcactgaagtgagtttggtacttctcgggttcctcatctgctagcgac 396 ||||||||||| |||||||||||||||| ||||||| || || || ||| | | | | Sbjct: 56653 ttcttgatgtaagcactgaagtgagtttgtaacttctctggctcatcttctcccaacagc 56712 Query: 397 ctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccaga 456 ||||||||| | ||||| || ||||||||||| || | ||| || |||||||| || Sbjct: 56713 ttcatgtagtttgagacatggccaccatagatgtagttcctgtggatttcagcatcaagt 56772 Query: 457 gacttctcgtccttcttgaaaccagcaaatctcttgtcactgtggggaatgtccagacca 516 ||| | ||||| | ||| ||||||||||||||||||||||| || || || |||||| Sbjct: 56773 tgcttgttctccttgtggaacccagcaaatctcttgtcactgtgagggatatcaagacca 56832 Query: 517 ccgtccaaagctccct 532 || |||||||| |||| Sbjct: 56833 ccatccaaagcaccct 56848
>gb|DQ228334.1| Solanum tuberosum clone 145F02 unknown mRNA Length = 1114 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 478 ccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctcccttaagt 537 |||||||| ||||| ||||| || || ||||| | ||||| ||||| || ||||| || Sbjct: 576 ccagcaaacctcttctcactatgagggatgtcaatcccaccatccaatgcacccttgaga 517 Query: 538 gcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacgg 597 |||||||| |||||||| || || ||||| || | || || || |||||||| |||||| Sbjct: 516 gcaccaaaaacacggttccctgtggtagttcttaagaggccgacgtccaagagagcacgg 457 Query: 598 aaaggcctcct 608 ||||||||||| Sbjct: 456 aaaggcctcct 446 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 190 ttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttgggag 244 |||||||| || || || |||||||| |||||||||||||||| |||||||||| Sbjct: 864 ttcctctcttcataagtcagcttcttaaggttgtacctcttgtgtgtcttgggag 810 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 gcgcggatggcagcgtgaaccttcttgta 305 ||||| |||||||| |||||||||||||| Sbjct: 777 gcgcgtatggcagcatgaaccttcttgta 749
>gb|BT012733.1| Lycopersicon esculentum clone 113662F, mRNA sequence Length = 1161 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 514 ccaccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgata 573 ||||| ||||| || ||||| || ||||||||||||||||| || || ||||| || | Sbjct: 563 ccaccatccaatgcacccttgagagcaccaaacacacggttccctgtagtagttcttaag 504 Query: 574 agaccaacatccaagagcgcacggaaaggcctcct 608 || || || |||||||| ||||||||||||||||| Sbjct: 503 aggccgacgtccaagagagcacggaaaggcctcct 469 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 190 ttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttgggag 244 |||||||| || || || |||||||| |||||||||||||||| |||||||||| Sbjct: 887 ttcctctcttcataagtcagcttcttaaggttgtacctcttgtgtgtcttgggag 833
>dbj|AB001583.1| Solanum melongena mRNA for ribosomal protein L5, partial cds Length = 399 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 190 ttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggg 242 |||||||| || ||||| |||||||| |||||||||||||||| |||||||| Sbjct: 288 ttcctctcttcataggtcagcttcttaaggttgtacctcttgtgtgtcttggg 236 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 398 tcatgtagtcagcaacatgccctccatagatgtacttgcggtgaa 442 ||||||| |||||||||| || |||||||| ||||||||||||| Sbjct: 80 tcatgtatgcagcaacatggccaccatagatatacttgcggtgaa 36 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 283 atggcagcgtgaaccttcttgta 305 ||||||||||||||||||||||| Sbjct: 195 atggcagcgtgaaccttcttgta 173
>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017, complete sequence Length = 121127 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 478 ccagcaaatctcttgtcactgtggggaatgtccagaccaccgtccaaagctccct 532 ||||||||||| || |||||||| ||||| |||||||| || ||||| ||||||| Sbjct: 46724 ccagcaaatcttttatcactgtgaggaatatccagacccccatccaaggctccct 46778 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 187 gccttcctctcctcgtaggtgagcttctt 215 |||||||||||||| |||||||||||||| Sbjct: 46107 gccttcctctcctcataggtgagcttctt 46135
>emb|Z99296.2|SPAC3H5 S.pombe chromosome I cosmid c3H5 Length = 34284 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Minus Query: 399 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 454 |||||| ||||||||||| || |||||||| || |||||| || ||||| |||||| Sbjct: 1285 catgtattcagcaacatggccaccatagatatatttgcggagagtctcatcatcca 1230
>ref|XM_780232.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC580159 (LOC580159), mRNA Length = 1902 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 117 ctcgtcatcctcgtcatcgtcggc 140 |||||||||||||||||||||||| Sbjct: 1131 ctcgtcatcctcgtcatcgtcggc 1108 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tcatcctcgtcatcgtcggc 140 |||||||||||||||||||| Sbjct: 1187 tcatcctcgtcatcgtcggc 1168
>emb|AL031528.1|SPBC11C11 S.pombe chromosome II cosmid c11C11 Length = 22500 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Plus Query: 399 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 454 |||||| ||||||||||| || |||||||| ||||| ||| || ||||| |||||| Sbjct: 20215 catgtattcagcaacatgaccaccatagatatacttacggagagtctcatcatcca 20270
>ref|NM_001022319.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC11C11.09c), partial mRNA Length = 885 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Minus Query: 399 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 454 |||||| ||||||||||| || |||||||| ||||| ||| || ||||| |||||| Sbjct: 624 catgtattcagcaacatgaccaccatagatatacttacggagagtctcatcatcca 569
>ref|NM_001019604.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC3H5.12c), partial mRNA Length = 885 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Minus Query: 399 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 454 |||||| ||||||||||| || |||||||| || |||||| || ||||| |||||| Sbjct: 624 catgtattcagcaacatggccaccatagatatatttgcggagagtctcatcatcca 569
>gb|U48270.1|SPU48270 Schizosaccharomyces pombe ribosomal protein L5 gene, complete cds Length = 1238 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Minus Query: 399 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 454 |||||| ||||||||||| || |||||||| || |||||| || ||||| |||||| Sbjct: 660 catgtattcagcaacatggccaccatagatatatttgcggagagtctcatcatcca 605
>dbj|AB016045.1| Schizosaccharomyces pombe mRNA for ribosomal protein L5 homolog, partial cds Length = 779 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Minus Query: 399 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 454 |||||| ||||||||||| || |||||||| ||||| ||| || ||||| |||||| Sbjct: 486 catgtattcagcaacatgaccaccatagatatacttacggagagtctcatcatcca 431
>ref|XM_500389.1| Yarrowia lipolytica CLIB122, YALI0B01540g predicted mRNA Length = 210 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 116 actcgtcatcctcgtcatcgtcg 138 ||||||||||||||||||||||| Sbjct: 208 actcgtcatcctcgtcatcgtcg 186
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 116 actcgtcatcctcgtcatcgtcg 138 ||||||||||||||||||||||| Sbjct: 245151 actcgtcatcctcgtcatcgtcg 245173
>ref|XM_366233.1| Magnaporthe grisea 70-15 predicted protein (MG10452.4) partial mRNA Length = 738 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 121 tcatcctcgtcatcgtcggcggcaccagca 150 ||||| |||||||||||||||||| ||||| Sbjct: 452 tcatcgtcgtcatcgtcggcggcagcagca 423 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 121 tcatcctcgtcatcgtcggcggcaccagca 150 ||||| |||||||||||||||||| ||||| Sbjct: 383 tcatcgtcgtcatcgtcggcggcagcagca 354 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 tcgtcatcgtcggcggcaccagca 150 |||||||||||||||||| ||||| Sbjct: 653 tcgtcatcgtcggcggcagcagca 630
>dbj|AK221847.1| Arabidopsis thaliana mRNA for ribosomal protein, complete cds, clone: RAFL22-05-O03 Length = 517 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 337 ttcttgatgtactcactgaagtgagtttggtacttctc 374 ||||||||||| |||||||||||||||| ||||||| Sbjct: 114 ttcttgatgtaagcactgaagtgagtttgtaacttctc 77 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 189 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 233 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 262 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 218
>ref|XM_363564.1| Magnaporthe grisea 70-15 hypothetical protein (MG01490.4) partial mRNA Length = 873 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 catcctcgtcatcgtcggcgg 142 ||||||||||||||||||||| Sbjct: 261 catcctcgtcatcgtcggcgg 281
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tcgtcatcctcgtcatcgtcg 138 ||||||||||||||||||||| Sbjct: 150462 tcgtcatcctcgtcatcgtcg 150442
>emb|AJ296686.1|PAB296686 Picea abies ATC microsatellite DNA, clone EATC1A02 Length = 421 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tcgtcatcctcgtcatcgtcg 138 ||||||||||||||||||||| Sbjct: 191 tcgtcatcctcgtcatcgtcg 211
>gb|AC146108.3| Pan troglodytes BAC clone RP43-22F10 from 7, complete sequence Length = 230349 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 gaggctggccttcctctcctc 200 ||||||||||||||||||||| Sbjct: 69373 gaggctggccttcctctcctc 69393
>gb|AC146056.2| Pan troglodytes BAC clone RP43-89N11 from 7, complete sequence Length = 154447 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 gaggctggccttcctctcctc 200 ||||||||||||||||||||| Sbjct: 112651 gaggctggccttcctctcctc 112671
>gb|AF513502.1| Homo sapiens STRA8 (STRA8) mRNA, complete cds Length = 993 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gaggctggccttcctctcctc 200 ||||||||||||||||||||| Sbjct: 588 gaggctggccttcctctcctc 568
>emb|AJ890137.1| Murid Herpesvirus 2 r138 gene (partial), r139 gene, r140 gene, r141 gene and r142 gene (partial) Length = 7462 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tcgtcatcctcgtcatcgtcg 138 ||||||||||||||||||||| Sbjct: 3340 tcgtcatcctcgtcatcgtcg 3360
>ref|NM_182489.1| Homo sapiens STRA8 (LOC346673), mRNA Length = 993 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gaggctggccttcctctcctc 200 ||||||||||||||||||||| Sbjct: 588 gaggctggccttcctctcctc 568
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tcgtcatcctcgtcatcgtcg 138 ||||||||||||||||||||| Sbjct: 13719 tcgtcatcctcgtcatcgtcg 13699
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tcgtcatcctcgtcatcgtcg 138 ||||||||||||||||||||| Sbjct: 111766 tcgtcatcctcgtcatcgtcg 111746
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tcgtcatcctcgtcatcgtcg 138 ||||||||||||||||||||| Sbjct: 190797 tcgtcatcctcgtcatcgtcg 190817
>ref|NM_132413.1| Drosophila melanogaster CG15295-RA (CG15295), mRNA Length = 2288 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tcgtcatcctcgtcatcgtcg 138 ||||||||||||||||||||| Sbjct: 962 tcgtcatcctcgtcatcgtcg 942
>gb|AC009542.2|AC009542 Homo sapiens clone RP11-260N14 from 7q31, complete sequence Length = 160367 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gaggctggccttcctctcctc 200 ||||||||||||||||||||| Sbjct: 92688 gaggctggccttcctctcctc 92668
>gb|AC009330.5|AC009330 Homo sapiens clone RP11-83M17 from 7q31, complete sequence Length = 174768 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gaggctggccttcctctcctc 200 ||||||||||||||||||||| Sbjct: 89870 gaggctggccttcctctcctc 89850
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tcgtcatcctcgtcatcgtcg 138 ||||||||||||||||||||| Sbjct: 130980 tcgtcatcctcgtcatcgtcg 131000
>gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence Length = 282600 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tcgtcatcctcgtcatcgtcg 138 ||||||||||||||||||||| Sbjct: 115897 tcgtcatcctcgtcatcgtcg 115917
>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence Length = 339089 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tcgtcatcctcgtcatcgtcg 138 ||||||||||||||||||||| Sbjct: 129620 tcgtcatcctcgtcatcgtcg 129640
>dbj|AK115905.1| Ciona intestinalis cDNA, clone:cilv039f09, full insert sequence Length = 1057 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 498 gtggggaatgtccagaccaccgtccaaagctcccttaagtgcacc 542 |||||||||||| ||||||||||| ||||||||| | |||||| Sbjct: 576 gtggggaatgtcgagaccaccgtcagcagctcccttcattgcacc 532
>gb|M60100.1|HRSMHDRA E.caballus MHC class II DR alpha chain (A2 haplotype) gene, 3' end Length = 2006 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 ttcccttcttgatgtactcac 352 ||||||||||||||||||||| Sbjct: 906 ttcccttcttgatgtactcac 926
>ref|NM_180473.1| Arabidopsis thaliana unknown protein AT5G10710 transcript variant AT5G10710.2 mRNA, complete cds Length = 1170 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gacagaaaggaacaggtccg 40 |||||||||||||||||||| Sbjct: 677 gacagaaaggaacaggtccg 696
>ref|NM_121109.2| Arabidopsis thaliana unknown protein AT5G10710 transcript variant AT5G10710.1 mRNA, complete cds Length = 1270 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gacagaaaggaacaggtccg 40 |||||||||||||||||||| Sbjct: 777 gacagaaaggaacaggtccg 796
>ref|XM_467072.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1424 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cttccatgtcatcagctgag 330 |||||||||||||||||||| Sbjct: 386 cttccatgtcatcagctgag 367
>gb|AC113006.9| Mus musculus chromosome 16, clone RP23-332O12, complete sequence Length = 195941 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 tcatcagctgagattccctt 338 |||||||||||||||||||| Sbjct: 107257 tcatcagctgagattccctt 107276
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cctcgtcatcgtcggcggca 144 |||||||||||||||||||| Sbjct: 302688 cctcgtcatcgtcggcggca 302669
>ref|XM_754221.1| Ustilago maydis 521 hypothetical protein (UM03167.1) partial mRNA Length = 2610 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tcgtcatcctcgtcatcgtc 137 |||||||||||||||||||| Sbjct: 1748 tcgtcatcctcgtcatcgtc 1729
>ref|XM_754531.1| Ustilago maydis 521 hypothetical protein (UM03477.1) partial mRNA Length = 3900 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tcgtcatcctcgtcatcgtc 137 |||||||||||||||||||| Sbjct: 1019 tcgtcatcctcgtcatcgtc 1000
>ref|XM_746920.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g08130) partial mRNA Length = 546 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 606 cctctcatcagcaggctcaa 625 |||||||||||||||||||| Sbjct: 495 cctctcatcagcaggctcaa 476
>ref|XM_380961.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00785.1) partial mRNA Length = 600 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tcgtcatcctcgtcatcgtc 137 |||||||||||||||||||| Sbjct: 593 tcgtcatcctcgtcatcgtc 574
>gb|AF315713.1| Malus x domestica 3-hydroxy-3-methylglutaryl coenzyme A reductase mRNA, partial cds Length = 1767 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tcctcgtcatcgtcggcggc 143 |||||||||||||||||||| Sbjct: 323 tcctcgtcatcgtcggcggc 304
>emb|Z49967.1|CEF54C9 Caenorhabditis elegans Cosmid F54C9, complete sequence Length = 34842 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tcatgtagtcagcaacatgc 417 |||||||||||||||||||| Sbjct: 16526 tcatgtagtcagcaacatgc 16507
>gb|AC161114.4| Mus musculus BAC clone RP24-338A5 from chromosome 12, complete sequence Length = 220746 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 gttgagggcgttgagcctct 175 |||||||||||||||||||| Sbjct: 125822 gttgagggcgttgagcctct 125841
>gb|AF360281.1| Arabidopsis thaliana unknown protein (At5g10710) mRNA, complete cds Length = 1285 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gacagaaaggaacaggtccg 40 |||||||||||||||||||| Sbjct: 776 gacagaaaggaacaggtccg 795
>gb|AC164004.3| Mus musculus chromosome 5, clone RP23-58C20, complete sequence Length = 198872 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 aagacagaaaggaacaggtc 38 |||||||||||||||||||| Sbjct: 112990 aagacagaaaggaacaggtc 112971
>gb|BC037840.2| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 10, mRNA (cDNA clone IMAGE:4814643) Length = 1531 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tggttgatttggccatgcta 270 |||||||||||||||||||| Sbjct: 447 tggttgatttggccatgcta 466
>gb|AY043490.1| Malus x domestica 3-hydroxy-3-methylglutaryl coenzyme A reductase (hmg1) mRNA, complete cds Length = 1827 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tcctcgtcatcgtcggcggc 143 |||||||||||||||||||| Sbjct: 383 tcctcgtcatcgtcggcggc 364
>gb|BC047625.1| Homo sapiens cDNA clone IMAGE:4795909 Length = 2187 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 agcgtgaaccttcttgtaaactgc 311 |||||||||||| ||||||||||| Sbjct: 1284 agcgtgaaccttattgtaaactgc 1307
>gb|BC036587.2| Homo sapiens cDNA clone IMAGE:4799072 Length = 2187 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 agcgtgaaccttcttgtaaactgc 311 |||||||||||| ||||||||||| Sbjct: 1284 agcgtgaaccttattgtaaactgc 1307
>gb|BC034036.1| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 10, mRNA (cDNA clone IMAGE:4811633), partial cds Length = 4424 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tggttgatttggccatgcta 270 |||||||||||||||||||| Sbjct: 3333 tggttgatttggccatgcta 3352
>gb|AC100771.2| Homo sapiens chromosome 11, clone RP11-159H22, complete sequence Length = 177819 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 agcgtgaaccttcttgtaaactgc 311 ||||||||||||||||| |||||| Sbjct: 96341 agcgtgaaccttcttgtgaactgc 96318
>dbj|AB035927.1| Oryza sativa (japonica cultivar-group) GDH3 mRNA for glutamate dehydrogenase 3, complete cds Length = 1452 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cttccatgtcatcagctgag 330 |||||||||||||||||||| Sbjct: 412 cttccatgtcatcagctgag 393
>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence Length = 175838 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caagatacccaagacagaaa 28 |||||||||||||||||||| Sbjct: 53284 caagatacccaagacagaaa 53303
>gb|AY039230.1| Malus x domestica 3-hydroxy-3-methylglutaryl coenzyme A reductase (hmgr) mRNA, complete cds Length = 2301 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tcctcgtcatcgtcggcggc 143 |||||||||||||||||||| Sbjct: 536 tcctcgtcatcgtcggcggc 517
>gb|AC020901.8|AC020901 Homo sapiens chromosome 5 clone CTC-527N11, complete sequence Length = 180636 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 caagatacccaagacagaaa 28 |||||||||||||||||||| Sbjct: 161539 caagatacccaagacagaaa 161558
>ref|NM_063410.2| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-5) (rpl-5) mRNA, complete cds Length = 969 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tcatgtagtcagcaacatgc 417 |||||||||||||||||||| Sbjct: 630 tcatgtagtcagcaacatgc 611
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 116 actcgtcatcctcgtcatcgtcggcggc 143 ||||||| |||||||| ||||||||||| Sbjct: 24219624 actcgtcctcctcgtcgtcgtcggcggc 24219597
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cttccatgtcatcagctgag 330 |||||||||||||||||||| Sbjct: 26259382 cttccatgtcatcagctgag 26259363
>gb|DQ022844.1| Oryza sativa (japonica cultivar-group) cytochrome P450 mRNA, complete cds Length = 1719 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 116 actcgtcatcctcgtcatcgtcggcggc 143 ||||||| |||||||| ||||||||||| Sbjct: 549 actcgtcctcctcgtcgtcgtcggcggc 576
>emb|BX830763.1|CNS09ZHR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZF05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1195 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gacagaaaggaacaggtccg 40 |||||||||||||||||||| Sbjct: 734 gacagaaaggaacaggtccg 753
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 ctcgtcatcctcgtcatcgtcggcggca 144 |||||| || |||||||||||||||||| Sbjct: 2243576 ctcgtcttcatcgtcatcgtcggcggca 2243603
>gb|BT002314.1| Arabidopsis thaliana clone C104667 unknown protein (At5g10710) mRNA, complete cds Length = 970 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gacagaaaggaacaggtccg 40 |||||||||||||||||||| Sbjct: 577 gacagaaaggaacaggtccg 596
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gagggcgttgagcctctcga 178 |||||||||||||||||||| Sbjct: 433386 gagggcgttgagcctctcga 433367
>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0012J10 Length = 132375 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cttccatgtcatcagctgag 330 |||||||||||||||||||| Sbjct: 82223 cttccatgtcatcagctgag 82204
>gb|AE005004.1| Halobacterium sp. NRC-1 section 35 of 170 of the complete genome Length = 11030 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tcctcgtcatcgtcggcggc 143 |||||||||||||||||||| Sbjct: 5096 tcctcgtcatcgtcggcggc 5077
>dbj|AB125365.1| Corvus macrorhynchos DRD4 gene for dopamine receptor D4, exon 1, partial cds Length = 182 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 tcatcctcgtcatcgtcggcggca 144 |||||||| ||||||||||||||| Sbjct: 61 tcatcctcctcatcgtcggcggca 84
>dbj|AK121238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096A02, full insert sequence Length = 1698 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 116 actcgtcatcctcgtcatcgtcggcggc 143 ||||||| |||||||| ||||||||||| Sbjct: 543 actcgtcctcctcgtcgtcgtcggcggc 570
>dbj|AK103028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117C02, full insert sequence Length = 1424 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cttccatgtcatcagctgag 330 |||||||||||||||||||| Sbjct: 386 cttccatgtcatcagctgag 367
>gb|AC102476.14| Mus musculus chromosome 5, clone RP24-396L12, complete sequence Length = 181047 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aagacagaaaggaacaggtc 38 |||||||||||||||||||| Sbjct: 168314 aagacagaaaggaacaggtc 168333
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 116 actcgtcatcctcgtcatcgtcggcggc 143 ||||||| |||||||| ||||||||||| Sbjct: 24147830 actcgtcctcctcgtcgtcgtcggcggc 24147803
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 116 actcgtcatcctcgtcatcgtcggcggc 143 ||||||| |||||||| ||||||||||| Sbjct: 104315 actcgtcctcctcgtcgtcgtcggcggc 104288
>emb|AL139194.7|CNS01DXB Human chromosome 14 DNA sequence BAC C-2190G12 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157120 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 agcgtgaaccttcttgtaaactgc 311 |||||||||||| ||||||||||| Sbjct: 41652 agcgtgaaccttattgtaaactgc 41675 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,896,642 Number of Sequences: 3902068 Number of extensions: 4896642 Number of successful extensions: 88214 Number of sequences better than 10.0: 110 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87692 Number of HSP's gapped (non-prelim): 498 length of query: 628 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 605 effective length of database: 17,143,297,704 effective search space: 10371695110920 effective search space used: 10371695110920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
