ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags31h22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y5712_ARATH (O04658) Hypothetical protein At5g27120 90 8e-18
2NOP5_RAT (Q9QZ86) Nucleolar protein NOP5 (Nucleolar protein 5) (... 59 1e-08
3NOP5_HUMAN (Q9Y2X3) Nucleolar protein NOP5 (Nucleolar protein 5)... 58 3e-08
4Y5714_ARATH (O04656) Hypothetical protein At5g27140 49 1e-05
5NOP58_YEAST (Q12499) Nucleolar protein NOP58 (Nucleolar protein ... 48 3e-05
6NOP12_NEUCR (Q7S2L7) Nucleolar protein 12 39 0.021
7LGE1_YEAST (Q02796) Transcriptional regulatory protein LGE1 (Lar... 37 0.079
8SMAD5_RAT (Q9R1V3) Mothers against decapentaplegic homolog 5 (SM... 33 1.1
9NR4A1_CANFA (P51666) Orphan nuclear receptor NR4A1 (Orphan nucle... 32 2.5
10SMAD5_MOUSE (P97454) Mothers against decapentaplegic homolog 5 (... 32 2.5
11SMAD5_HUMAN (Q99717) Mothers against decapentaplegic homolog 5 (... 32 2.5
12NR4A1_HUMAN (P22736) Orphan nuclear receptor NR4A1 (Orphan nucle... 31 3.3
13AFF3_HUMAN (P51826) AF4/FMR2 family member 3 (LAF-4 protein) (Ly... 31 3.3
14OXR1_CANAL (Q5AEM5) Oxidation resistance protein 1 31 3.3
15HD2A_SOLCH (Q6V9I6) Histone deacetylase 2a (HD2a) (ScHD2a) 31 3.3
16ANXA1_PIG (P19619) Annexin A1 (Annexin I) (Lipocortin I) (Calpac... 31 4.3
17SNF1_CANAL (P52497) Carbon catabolite derepressing protein kinas... 31 4.3
18SNF1_CANTR (O94168) Carbon catabolite derepressing protein kinas... 30 5.7
19PSD1_DROME (Q9V3P6) 26S proteasome non-ATPase regulatory subunit... 30 5.7
20ATF4_MOUSE (Q06507) Cyclic AMP-dependent transcription factor AT... 30 7.4
21RL26L_HUMAN (Q9UNX3) 60S ribosomal protein L26-like 1 30 7.4
22ANTR2_HUMAN (P58335) Anthrax toxin receptor 2 precursor (Capilla... 30 7.4
23RL26_CHICK (P47832) 60S ribosomal protein L26 (Fragment) 30 9.7
24RL26_MOUSE (P61255) 60S ribosomal protein L26 (Silica-induced ge... 30 9.7
25RL26_MACFA (P61256) 60S ribosomal protein L26 30 9.7
26RL26_HUMAN (P61254) 60S ribosomal protein L26 30 9.7
27RL26_BOVIN (P61257) 60S ribosomal protein L26 30 9.7
28B4_XENLA (P15308) B4 protein (Linker histone B4) (Histone H1-lik... 30 9.7
29TXND3_ANTCR (P90666) Thioredoxin domain-containing protein 3 hom... 30 9.7
30PRP46_SCHPO (O13615) Pre-mRNA-splicing factor prp46 (Pre-mRNA-pr... 30 9.7

>Y5712_ARATH (O04658) Hypothetical protein At5g27120|
          Length = 439

 Score = 89.7 bits (221), Expect = 8e-18
 Identities = 45/65 (69%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
 Frame = -1

Query: 717 RYDALGDGEHNSLGVESRLKLETWLRVLEGKELGRSAGSTKGKPKIEVYEKDRKNGP-GL 541
           R DALGD + N++GVE+RLKLE  LR LEGK+LGR +GS KGKPKIEVY+KD+K G  GL
Sbjct: 369 RCDALGDSQDNTMGVENRLKLEARLRTLEGKDLGRLSGSAKGKPKIEVYDKDKKKGSGGL 428

Query: 540 IAPAK 526
           I PAK
Sbjct: 429 ITPAK 433



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>NOP5_RAT (Q9QZ86) Nucleolar protein NOP5 (Nucleolar protein 5)|
           (Nopp140-associated protein)
          Length = 534

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
 Frame = -1

Query: 717 RYDALGDGEHNSLGVESRLKLETWLRVLEGKELGRSAGSTKGKPKIEVYEKDRKNGPGLI 538
           RYDA G+   +++G E+R KLE  LR+LE + + + +G+ K   K E YE          
Sbjct: 371 RYDAFGEDSSSAMGAENRAKLEARLRILEDRGIRKISGTGKALAKAEKYEHK-------- 422

Query: 537 APAKTYNPSADLVL-----AQSMEETPKKPDAASKK-RKHDDAVTAPSTELAEEAIQEDG 376
           +  KTY+PS D  L      + +EE  K+ +   KK +K    + A   E  EEA +E  
Sbjct: 423 SEVKTYDPSGDSTLPTCSKKRKIEEVDKEDEITEKKAKKAKIKIKAEVEEEMEEAEEEQV 482

Query: 375 DQE 367
            +E
Sbjct: 483 VEE 485



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>NOP5_HUMAN (Q9Y2X3) Nucleolar protein NOP5 (Nucleolar protein 5) (NOP58)|
          Length = 529

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
 Frame = -1

Query: 717 RYDALGDGEHNSLGVESRLKLETWLRVLEGKELGRSAGSTKGKPKIEVYEKDRKNGPGLI 538
           RYDA G+   +++GVE+R KLE  LR LE + + + +G+ K   K E YE          
Sbjct: 371 RYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKALAKTEKYEHK-------- 422

Query: 537 APAKTYNPSADLVL-----AQSMEETPKKPDAASKKRKHDDAVTAPSTELAEEAIQED 379
           +  KTY+PS D  L      + +E+  K+ +   KK K          E  E+  +E+
Sbjct: 423 SEVKTYDPSGDSTLPTCSKKRKIEQVDKEDEITEKKAKKAKIKVKVEEEEEEKVAEEE 480



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>Y5714_ARATH (O04656) Hypothetical protein At5g27140|
          Length = 435

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
 Frame = -1

Query: 717 RYDALGDGEHNSLGVESRLKLETWLRVLEGKELGRSAGSTKGKPKIEVYEKDRKNGPGLI 538
           R DA G+G+ N++GVESRLKLE  LR LEG +LG        + + EV +KD K      
Sbjct: 326 RCDAFGNGQDNTMGVESRLKLEARLRNLEGGDLGAC------EEEEEVNDKDTKK----- 374

Query: 537 APAKTYNPSADLVLAQSMEETPKKPDAASKKRKHD---DAVTAPSTELAEEAI 388
                          ++ +E   K +  SKKRK +   + V  P+ +  +E +
Sbjct: 375 ---------------EADDEEEPKTEECSKKRKKEAELETVEDPAKKSKQEGV 412



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>NOP58_YEAST (Q12499) Nucleolar protein NOP58 (Nucleolar protein NOP5)|
          Length = 511

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
 Frame = -1

Query: 717 RYDALGDGEHNS--LGVESRLKLETWLRVLEGKELGRSAGSTKGKPKIEVYEKDRKNGPG 544
           RYDAL +   +S  +G+ESR K+E  L  LEG++L  +    +   K+E+ E        
Sbjct: 372 RYDALAEDRDDSGDIGLESRAKVENRLSQLEGRDLRTTPKVVREAKKVEMTE-------- 423

Query: 543 LIAPAKTYNPSADLVLA------QSMEETPKKPDAASKKRKHDDAVTAPSTELAEE 394
               A+ YN  AD   A       S +E  +K +   KKRK DD   +  ++ A++
Sbjct: 424 ----ARAYNADADTAKAASDSESDSDDEEEEKKEKKEKKRKRDDDEDSKDSKKAKK 475



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>NOP12_NEUCR (Q7S2L7) Nucleolar protein 12|
          Length = 594

 Score = 38.5 bits (88), Expect = 0.021
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = -1

Query: 546 GLIAPAKTYNPSADLVLAQSMEETPKKPDAASKKRKHDDAVTAPSTELAEEAIQEDGDQE 367
           GL+AP K  +PS D + A S+     +P A   +     +  AP     EE +Q++GD E
Sbjct: 6   GLVAPVKKVDPSLDALFATSVGPAKPRPAAKYSEPLPTKSKKAPVPSKKEEDVQDEGDDE 65



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>LGE1_YEAST (Q02796) Transcriptional regulatory protein LGE1 (Large cells|
           protein 1)
          Length = 332

 Score = 36.6 bits (83), Expect = 0.079
 Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +3

Query: 126 NSEPKPTQNDLPFFPSS---LGNRSINQPAFSFSSYHFYQTQFPREQPPP 266
           NS    T N LP  PS      NRS +  A+ +SS H Y     RE PPP
Sbjct: 161 NSSTSSTSNGLPPPPSVSSITNNRSYHSSAYPYSSSHTYNNYHHRETPPP 210



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>SMAD5_RAT (Q9R1V3) Mothers against decapentaplegic homolog 5 (SMAD 5)|
           (Mothers against DPP homolog 5) (Smad5)
          Length = 465

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 19/52 (36%), Positives = 23/52 (44%)
 Frame = +3

Query: 111 SLHNTNSEPKPTQNDLPFFPSSLGNRSINQPAFSFSSYHFYQTQFPREQPPP 266
           S H  NS P P   + P+ PS   +   N PA S     F   Q P + PPP
Sbjct: 176 SFHQPNSTPFPLSPNSPYPPSPASSTYPNSPASSGPGSPF---QLPADTPPP 224



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>NR4A1_CANFA (P51666) Orphan nuclear receptor NR4A1 (Orphan nuclear receptor|
           HMR) (Orphan nuclear receptor NGFI-B)
          Length = 598

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 26/71 (36%), Positives = 30/71 (42%), Gaps = 17/71 (23%)
 Frame = +3

Query: 246 PREQPPPLSPW--TFFSFS-------CRSW-YQLQETPQRPWTSFSFSSCPP-------G 374
           P  QPP LSPW  +F  FS        R+W  QL +    P     FS  PP        
Sbjct: 144 PSFQPPQLSPWDGSFGPFSPSQTYEGLRAWTEQLPKASGHPQPPAFFSFSPPTGPSPSLA 203

Query: 375 HHPLELLPQQA 407
             PL+L P QA
Sbjct: 204 QSPLKLFPSQA 214



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>SMAD5_MOUSE (P97454) Mothers against decapentaplegic homolog 5 (SMAD 5)|
           (Mothers against DPP homolog 5) (Smad5) (mSmad5)
           (Dwarfin-C) (Dwf-C)
          Length = 465

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 111 SLHNTNSEPKPTQNDLPFFPSSLGNRSINQPAFSFSSYHFYQTQFPREQPPP 266
           S H  N+ P P   + P+ PS   +   N PA S     F   Q P + PPP
Sbjct: 176 SFHQPNNAPFPLSPNSPYPPSPASSTYPNSPASSGPGSPF---QLPADTPPP 224



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>SMAD5_HUMAN (Q99717) Mothers against decapentaplegic homolog 5 (SMAD 5)|
           (Mothers against DPP homolog 5) (Smad5) (hSmad5) (JV5-1)
          Length = 465

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 111 SLHNTNSEPKPTQNDLPFFPSSLGNRSINQPAFSFSSYHFYQTQFPREQPPP 266
           S H  N+ P P   + P+ PS   +   N PA S     F   Q P + PPP
Sbjct: 176 SFHQPNNTPFPLSPNSPYPPSPASSTYPNSPASSGPGSPF---QLPADTPPP 224



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>NR4A1_HUMAN (P22736) Orphan nuclear receptor NR4A1 (Orphan nuclear receptor|
           HMR) (Early response protein NAK1) (TR3 orphan receptor)
           (ST-59)
          Length = 598

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 29/73 (39%), Positives = 34/73 (46%), Gaps = 19/73 (26%)
 Frame = +3

Query: 246 PREQPPPLSPW--TFFSFS-------CRSW-YQLQET--PQRPWTSFSFSSCPP------ 371
           P  QPP LSPW  +F  FS        R+W  QL +   P +P   FSFS  PP      
Sbjct: 144 PSFQPPQLSPWDGSFGHFSPSQTYEGLRAWTEQLPKASGPPQPPAFFSFS--PPTGPSPS 201

Query: 372 -GHHPLELLPQQA 407
               PL+L P QA
Sbjct: 202 LAQSPLKLFPSQA 214



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>AFF3_HUMAN (P51826) AF4/FMR2 family member 3 (LAF-4 protein) (Lymphoid nuclear|
           protein related to AF4)
          Length = 1227

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 31/142 (21%), Positives = 49/142 (34%), Gaps = 7/142 (4%)
 Frame = -1

Query: 549 PGLIAPAKTYNPSADLVLAQSMEETPKKPDAASKKRKHDDAVTAP-STELAEEAIQEDGD 373
           PG + P K   P+ D  L  S    PKK DA  +   +  + T+    +L   + +E+ +
Sbjct: 321 PGKVEPTKFPFPNKDSQLVSSGHNNPKKGDAEPESPDNGTSNTSMLEDDLKLSSDEEENE 380

Query: 372 QEGXXXXXXXXKD---VEESPAVDT---XXXXXXXXXXKGTEEEVAPVETESGKNDXXXX 211
           Q+              V + P   T              GT    +  E+ SG +     
Sbjct: 381 QQAAQRTALRALSDSAVVQQPNCRTSVPSSKGSSSSSSSGTSSSSSDSESSSGSDSETES 440

Query: 210 KRQAD*CFYSPEKKGRKASHFA 145
                    S E +G K  HF+
Sbjct: 441 S--------SSESEGSKPPHFS 454



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>OXR1_CANAL (Q5AEM5) Oxidation resistance protein 1|
          Length = 345

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 20/74 (27%), Positives = 34/74 (45%)
 Frame = +3

Query: 105 NSSLHNTNSEPKPTQNDLPFFPSSLGNRSINQPAFSFSSYHFYQTQFPREQPPPLSPWTF 284
           +S       +PKP +    FF + LGN S N  + S +S H   +     + PPL P T 
Sbjct: 47  DSVTEKPKEQPKPVKRRGTFFGNLLGNGSKNSSSASLNSSH--SSVSSSSKFPPLGPLTL 104

Query: 285 FSFSCRSWYQLQET 326
             +   + ++L ++
Sbjct: 105 TGYKESTHHRLLDS 118



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>HD2A_SOLCH (Q6V9I6) Histone deacetylase 2a (HD2a) (ScHD2a)|
          Length = 269

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
 Frame = -1

Query: 633 EGKELGRS-AG--STKGKPKIEVYE-----KDRKNGPGLIAPAKTYNPSADLVLAQSMEE 478
           E KE G+S AG  S  GK K+ + E     +D  +        +  + S D     S EE
Sbjct: 126 EPKEAGKSNAGKDSASGKQKVRIVEPTKDDEDESSDDDDSDMGEDEDDSDD-----SEEE 180

Query: 477 TPKKPDAASKKRKHDDAVTAPSTE 406
           TPKK + A K+RK D A   P T+
Sbjct: 181 TPKKAEPA-KRRKADSATKTPVTD 203



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>ANXA1_PIG (P19619) Annexin A1 (Annexin I) (Lipocortin I) (Calpactin II)|
           (Chromobindin-9) (p35) (Phospholipase A2 inhibitory
           protein)
          Length = 346

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = -1

Query: 567 KDRKNGPG-LIAPAKTYNPSADLVLAQSMEETPKKPDAASKKRKHDDAVTAPSTELAEEA 391
           K  K GPG  ++P  T+NPS+D V A     T K  D A+    H     A   ++    
Sbjct: 26  KGSKGGPGSAVSPYPTFNPSSD-VEASHKAITVKGVDEATIIEIHTKRTNAQRQQIKAAY 84

Query: 390 IQEDG 376
           +QE G
Sbjct: 85  LQEKG 89



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>SNF1_CANAL (P52497) Carbon catabolite derepressing protein kinase (EC|
           2.7.11.1)
          Length = 620

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 642 EAMFQASVDSQ-HQGNYVHHHQGHH 713
           +A  QAS D Q HQ N+ HHH  HH
Sbjct: 4   QAQPQASADQQQHQHNHHHHHHHHH 28



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>SNF1_CANTR (O94168) Carbon catabolite derepressing protein kinase (EC|
           2.7.11.1)
          Length = 619

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 654 QASVDSQHQGNYVHHHQGHH 713
           Q   D QH G++ HHH  HH
Sbjct: 6   QGQPDQQHSGDHQHHHHHHH 25



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>PSD1_DROME (Q9V3P6) 26S proteasome non-ATPase regulatory subunit 1 (26S|
            proteasome regulatory subunit RPN2) (26S proteasome
            regulatory complex subunit p110)
          Length = 1020

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 27/102 (26%), Positives = 44/102 (43%)
 Frame = -1

Query: 672  ESRLKLETWLRVLEGKELGRSAGSTKGKPKIEVYEKDRKNGPGLIAPAKTYNPSADLVLA 493
            E R K+ T +  +  ++  R     K   K++V ++D K G    A  K     AD  + 
Sbjct: 839  EEREKVATAVLSIAARQKRRENADKKEDEKMDV-DEDSKEGA---AVKKDEEAKADEKMV 894

Query: 492  QSMEETPKKPDAASKKRKHDDAVTAPSTELAEEAIQEDGDQE 367
               +E PKK D   KK++ D    A  T   ++  +E   +E
Sbjct: 895  T--DEKPKKKDEKEKKKEEDKEKEAAGTSSEKDKDKEKDKKE 934



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>ATF4_MOUSE (Q06507) Cyclic AMP-dependent transcription factor ATF-4|
           (C/EBP-related ATF) (C/ATF) (TAXREB67 homolog)
          Length = 349

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
 Frame = -1

Query: 612 SAGSTKGKPKIEVYEKDRKNGPGLIAPAKTYNPSADLVLAQSMEETPKKPDAASKKRKHD 433
           S G ++G P+ + Y+      PG+   AK      D  L +  +          KKR   
Sbjct: 247 SPGGSRGSPRPKPYDP-----PGVSLTAKVKTEKLDKKLKKMEQNKTAATRYRQKKRAEQ 301

Query: 432 DAVTAPSTELAE--EAIQEDGD 373
           +A+T    EL +  EA++E  D
Sbjct: 302 EALTGECKELEKKNEALKEKAD 323



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>RL26L_HUMAN (Q9UNX3) 60S ribosomal protein L26-like 1|
          Length = 145

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -1

Query: 696 GEHNSLGVESRLKLET-WLRVLEGKELGRSAGSTKGKPKIEVYEK 565
           G H S  V +RLKL+    ++LE K   R  G  KGK K E+ EK
Sbjct: 98  GIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEELIEK 142



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>ANTR2_HUMAN (P58335) Anthrax toxin receptor 2 precursor (Capillary|
           morphogenesis gene 2 protein) (CMG-2)
          Length = 489

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +1

Query: 4   KLNSIVCPIVVVNTAA*TLQ-SLYTIANKHRIAGEIPVYTTQILNLSLRKMTCLSSLLLW 180
           +LNS++CP  ++N A  TL  S+     K  I+G + V  T+  N     +  L  LLL 
Sbjct: 273 QLNSMLCPAPILNKAGETLDVSVSFNGGKSVISGSLIVTATECSNGIAAIIVILVLLLLL 332

Query: 181 GI 186
           GI
Sbjct: 333 GI 334



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>RL26_CHICK (P47832) 60S ribosomal protein L26 (Fragment)|
          Length = 128

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 696 GEHNSLGVESRLKLET-WLRVLEGKELGRSAGSTKGKPKIEVYEK 565
           G H S  V +RLKL+    ++LE K   R  G  KGK K E  EK
Sbjct: 81  GIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETIEK 125



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>RL26_MOUSE (P61255) 60S ribosomal protein L26 (Silica-induced gene 20 protein)|
           (SIG-20)
          Length = 145

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 696 GEHNSLGVESRLKLET-WLRVLEGKELGRSAGSTKGKPKIEVYEK 565
           G H S  V +RLKL+    ++LE K   R  G  KGK K E  EK
Sbjct: 98  GIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETIEK 142



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>RL26_MACFA (P61256) 60S ribosomal protein L26|
          Length = 145

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 696 GEHNSLGVESRLKLET-WLRVLEGKELGRSAGSTKGKPKIEVYEK 565
           G H S  V +RLKL+    ++LE K   R  G  KGK K E  EK
Sbjct: 98  GIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETIEK 142



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>RL26_HUMAN (P61254) 60S ribosomal protein L26|
          Length = 145

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 696 GEHNSLGVESRLKLET-WLRVLEGKELGRSAGSTKGKPKIEVYEK 565
           G H S  V +RLKL+    ++LE K   R  G  KGK K E  EK
Sbjct: 98  GIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETIEK 142



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>RL26_BOVIN (P61257) 60S ribosomal protein L26|
          Length = 145

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 696 GEHNSLGVESRLKLET-WLRVLEGKELGRSAGSTKGKPKIEVYEK 565
           G H S  V +RLKL+    ++LE K   R  G  KGK K E  EK
Sbjct: 98  GIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETIEK 142



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>B4_XENLA (P15308) B4 protein (Linker histone B4) (Histone H1-like protein)|
          Length = 273

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 28/135 (20%), Positives = 51/135 (37%)
 Frame = -1

Query: 627 KELGRSAGSTKGKPKIEVYEKDRKNGPGLIAPAKTYNPSADLVLAQSMEETPKKPDAASK 448
           + L  SA    G+ K+    K  K G   +A ++  +P+A+       +ET KK     K
Sbjct: 101 RPLNSSATGATGRFKLAKPVKTTKAGKENVA-SENVDPNAE-------QETQKKAPKKEK 152

Query: 447 KRKHDDAVTAPSTELAEEAIQEDGDQEGXXXXXXXXKDVEESPAVDTXXXXXXXXXXKGT 268
           K K +       T+   +  +ED D++         K+ +E    +           +  
Sbjct: 153 KAKTEKEPKGEKTKAVAKKAKEDSDEKPKVAKSKKDKEAKEVDKANKEAKEVDKANKEAK 212

Query: 267 EEEVAPVETESGKND 223
           E + AP +    K +
Sbjct: 213 EVDKAPAKKPKAKTE 227



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>TXND3_ANTCR (P90666) Thioredoxin domain-containing protein 3 homolog|
           (Intermediate chain 1)
          Length = 837

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = -1

Query: 495 AQSMEETPKKPDAASKKRKHDDAVTAPSTELAEEAIQEDGDQEGXXXXXXXXKDVEESPA 316
           A + EET +  +   KK + +    AP+    EEA+  +G  EG        +  EE  A
Sbjct: 777 APAAEETQQTQEGEEKKEETEQTQDAPAAGGGEEAVATEGGGEGDAKPEGGEEKTEEQTA 836



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>PRP46_SCHPO (O13615) Pre-mRNA-splicing factor prp46 (Pre-mRNA-processing|
           protein 5) (Complexed with cdc5 protein 1)
          Length = 473

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
 Frame = -1

Query: 633 EGKELGRSAGSTKGKPKIEVYEKDRKNGPGLIAPAKTYNPSADL--------------VL 496
           E  E G   G T GK K   YE+D      L   A + NPS+ +              V 
Sbjct: 52  EHLEYGSVLGGTVGKRKNRHYEEDTIGSNALTVRADSENPSSQVITKFSDPNKKIAGQVS 111

Query: 495 AQSMEETPKKPDAASKKRKHDDAVTAPSTELAEE 394
            QS+E+    P+AA +      A     T LAE+
Sbjct: 112 MQSLEKIKGVPEAAHRIAGESQASLVKRT-LAEQ 144


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,046,128
Number of Sequences: 219361
Number of extensions: 1775149
Number of successful extensions: 6264
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6199
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7309604013
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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