>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)|
          Length = 825

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = -3

Query: 399 EDQARCRLEAAVPGDRAATRHD*HREGAPEERPQASNR--HDQAACSGTDPWPATKAEGQ 226
           + + R   EAAV   RA T  D    G P   P++ +   H   A S T PWP T  E  
Sbjct: 191 DPRTRVEAEAAV---RAGTAVDFIWTGNPRTAPRSLSLGGHTVRALSPTPPWPGTDDEDD 247

Query: 225 EEAERDH 205
           + A+ D+
Sbjct: 248 DLADVDY 254

>DCUP_RHILO (Q98DY6) Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD)|
          Length = 343

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
 Frame = -1

Query: 563 HLIRRFPEGLPVVEVKDSYPTVLDDLQALKASGD---VWWLSSMDSQEDIVYPNDP 405
           +LIR+   G  VV++ DS+  VLDD     AS D   VW ++ +  Q   V+P+ P
Sbjct: 188 YLIRQIEAGADVVQIFDSWSGVLDD-----ASFDQFCVWPVAEIVRQVQAVHPDVP 238

>CAAL_PSEPK (Q88HV0) Carboxylate-amine ligase PP3253 (EC 6.3.-.-)|
          Length = 368

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 545 PEGLPVVEVKDSYPTVLDDLQALKASGDVWW 453
           PE LP     + Y  +L    AL A GD+WW
Sbjct: 188 PEALPDWAAYERYRALLQRTGALAADGDLWW 218

>SFR14_MOUSE (Q8CH09) Putative splicing factor, arginine/serine-rich 14|
            (Arginine/serine-rich splicing factor 14)
          Length = 1067

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = -3

Query: 327  REGAPEERPQASNRHDQAACSGTDPWPATKAEGQEEAERDH*EDQAHKRASA*AVRPCPV 148
            +EG  E  PQ  +   +A+  GT+  P  + E +EE+E +  E+ +  R  A A + CP 
Sbjct: 843  KEGKGE--PQEGHPEQEASLEGTEVLPEEEEEDEEESEDEGGEETSTLRPQAGAAK-CPG 899

Query: 147  S 145
            S
Sbjct: 900  S 900

>S12A5_RAT (Q63633) Solute carrier family 12 member 5 (Electroneutral|
            potassium-chloride cotransporter 2) (K-Cl cotransporter
            2) (Neuronal K-Cl cotransporter) (Furosemide-sensitive
            K-Cl cotransporter) (rKCC2)
          Length = 1116

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
 Frame = -3

Query: 399  EDQARCRLEAAVPGDRAATRHD*HREGAPEERPQASNRHDQAACSGTDPWPATKAEGQEE 220
            ++ A  RL   VP + A        E  PEE  Q  +     +C  + P P  + EG+ E
Sbjct: 944  KNPANTRLRLNVPEETACDN-----EEKPEEEVQLIHDQSAPSCPSSSPSPGEEPEGEGE 998

Query: 219  A--ERDH*EDQAHKRASA*AVRPCPVSA 142
               E+ H      K A+     P PVS+
Sbjct: 999  TDPEKVHLTWTKDKSAAQKNKGPSPVSS 1026

>CHL1_ARATH (Q05085) Nitrate/chlorate transporter|
          Length = 590

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +3

Query: 294 WLVAVLQEL--LLDVNHVSWQLYLPVQLLQVGIELD 395
           WLVAVL  L  L+ +    W +Y   +L +VGIELD
Sbjct: 546 WLVAVLVALNFLIFLVFSKWYVYKEKRLAEVGIELD 581

>TPM_BRABE (Q9NDS0) Tropomyosin|
          Length = 284

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 21/96 (21%), Positives = 38/96 (39%)
 Frame = -1

Query: 404 KSKIKLDADLKQLYREIELPRDMIDIEKELLKNGHKPATDTTKRRAAAQIHGXXXXXXXX 225
           +  +KL+ ++  L ++I +  D +D  +E LK   +     TK+ A A+           
Sbjct: 34  EKNVKLEDEINDLNKKIRMVEDELDKAQESLKEATEQLEAATKKAADAEAEVASLNRRIQ 93

Query: 224 XXXXXXXXXXKLTNAHLPELFDXAPLAQASNDAYKV 117
                     +  N+ + +L D    A  S  A KV
Sbjct: 94  LVEEELDRAQERLNSTVEKLTDSEKAADESERARKV 129

>YIHF_ECOLI (P32128) Hypothetical protein yihF|
          Length = 490

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 23/100 (23%), Positives = 47/100 (47%)
 Frame = -1

Query: 548 FPEGLPVVEVKDSYPTVLDDLQALKASGDVWWLSSMDSQEDIVYPNDPKSKIKLDADLKQ 369
           F E LP+++   S PT+   ++   A G+      +++  DI   +  KS    + D+K 
Sbjct: 349 FKEYLPLLQ--KSEPTIKQPVRWKNALGE------LNANLDISIADPAKSSSSTNKDIKS 400

Query: 368 LYREIELPRDMIDIEKELLKNGHKPATDTTKRRAAAQIHG 249
           L  +++LP +++    + L        +  +++A  QI G
Sbjct: 401 LNFDVKLPLNVVTETAKQLNLSEGMDAEKAQKQADKQISG 440

>TRPA1_HUMAN (O75762) Transient receptor potential cation channel subfamily A|
            member 1 (Ankyrin-like with transmembrane domains protein
            1) (Transformation sensitive-protein p120)
          Length = 1119

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
 Frame = -1

Query: 461  VWWLSSMDSQEDIVYPNDPKSKIKL---------DADLKQLYREIELPRDMIDIEKELLK 309
            +W+L  +D +  IVYPN P+S   L           +++Q     E+P     +E E+LK
Sbjct: 992  LWFLRKVDQKSTIVYPNKPRSGGMLFHIFCFLFCTGEIRQ-----EIPNADKSLEMEILK 1046

Query: 308  NGHK 297
              ++
Sbjct: 1047 QKYR 1050


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,848,295
Number of Sequences: 219361
Number of extensions: 1641510
Number of successful extensions: 5107
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5104
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)