Clone Information

BLAST Search Result

Clone Name	rbags31h06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton ...	266	3e-71
2	PMA4_NICPL (Q03194) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proto...	213	5e-55
3	PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) ...	204	2e-52
4	PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) ...	201	2e-51
5	PMA6_ARATH (Q9SH76) ATPase 6, plasma membrane-type (EC 3.6.3.6) ...	196	6e-50
6	PMA2_ARATH (P19456) ATPase 2, plasma membrane-type (EC 3.6.3.6) ...	194	2e-49
7	PMA1_ARATH (P20649) ATPase 1, plasma membrane-type (EC 3.6.3.6) ...	193	3e-49
8	PMA8_ARATH (Q9M2A0) ATPase 8, plasma membrane-type (EC 3.6.3.6) ...	192	7e-49
9	PMA3_ARATH (P20431) ATPase 3, plasma membrane-type (EC 3.6.3.6) ...	187	2e-47
10	PMA2_LYCES (P23980) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proto...	182	7e-46
11	PMA1_NICPL (Q08435) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proto...	182	1e-45
12	PMA11_ARATH (Q9LV11) ATPase 11, plasma membrane-type (EC 3.6.3.6...	180	3e-45
13	PMA4_ARATH (Q9SU58) ATPase 4, plasma membrane-type (EC 3.6.3.6) ...	180	4e-45
14	PMA3_NICPL (Q08436) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proto...	179	5e-45
15	PMA1_LYCES (P22180) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proto...	179	6e-45
16	PMA7_ARATH (Q9LY32) ATPase 7, plasma membrane-type (EC 3.6.3.6) ...	137	3e-32
17	PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6...	107	4e-23
18	PMAX_ARATH (Q9T0E0) Putative ATPase, plasma membrane-like	52	2e-06
19	PMA_AVESA (Q7M290) Plasma membrane ATPase (EC 3.6.3.6) (Proton p...	44	4e-04
20	CING_HUMAN (Q9P2M7) Cingulin	44	4e-04
21	CING_MOUSE (P59242) Cingulin	36	0.11
22	KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-ass...	32	2.1
23	ESC1_SCHPO (Q04635) Protein esc1	31	3.6
24	ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tum...	30	4.7
25	RSRC1_MOUSE (Q9DBU6) Arginine/serine-rich coiled coil protein 1	30	6.1
26	RNC_HUMAN (Q9NRR4) Ribonuclease III (EC 3.1.26.3) (RNase III) (D...	30	6.1
27	GCM2_MOUSE (O09102) Chorion-specific transcription factor GCMb (...	30	6.1
28	SMG_DROME (Q23972) Protein Smaug	30	6.1
29	SBE2_YEAST (P42223) Protein SBE2	30	8.0
30	RNH2_SYNP7 (Q31PW0) Ribonuclease HII (EC 3.1.26.4) (RNase HII)	30	8.0
31	RNH2_SYNP6 (Q5N4B8) Ribonuclease HII (EC 3.1.26.4) (RNase HII)	30	8.0
32	TIM_MOUSE (Q9R1X4) Timeless homolog (mTim)	30	8.0
33	POLN_SPDV (Q8JJX1) Nonstructural polyprotein (Polyprotein nsP123...	30	8.0
34	ASPP2_MOUSE (Q8CG79) Apoptosis-stimulating of p53 protein 2 (Tum...	30	8.0
35	BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) ...	30	8.0

>PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)|
          Length = 951

 Score =  266 bits (681), Expect = 3e-71
 Identities = 132/132 (100%), Positives = 132/132 (100%)
 Frame = -2

Query: 644  AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 465
            AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ
Sbjct: 820  AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 879

Query: 464  RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 285
            RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG
Sbjct: 880  RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 939

Query: 284  LDIDTINQNYTV 249
            LDIDTINQNYTV
Sbjct: 940  LDIDTINQNYTV 951

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>PMA4_NICPL (Q03194) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4)|
          Length = 952

 Score =  213 bits (541), Expect = 5e-55
 Identities = 105/132 (79%), Positives = 120/132 (90%)
 Frame = -2

Query: 644  AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 465
            AGVIWL+SI+FY PLDI KF IR++LSG+AW+NLL NKTAFTTK++YGK EREAQWA AQ
Sbjct: 823  AGVIWLYSIIFYLPLDIMKFAIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQ 882

Query: 464  RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 285
            RTLHGLQ PE  +  LFN+K+SYRELSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKG
Sbjct: 883  RTLHGLQPPEATN--LFNEKNSYRELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKG 940

Query: 284  LDIDTINQNYTV 249
            LDI+TI Q+YTV
Sbjct: 941  LDIETIQQHYTV 952

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>PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) (Proton pump 9)|
          Length = 954

 Score =  204 bits (518), Expect = 2e-52
 Identities = 99/132 (75%), Positives = 117/132 (88%)
 Frame = -2

Query: 644  AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 465
            AGVIWL+SIVFY PLDI KF IR+ LSGRAWDN+++NKTAFT+K++YGKGEREAQWA AQ
Sbjct: 825  AGVIWLYSIVFYIPLDILKFIIRYSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQ 884

Query: 464  RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 285
            RTLHGLQ  + +   +FNDKS+YRELSEIA+QAKRRAE+ARLRE +TLKGHVESVVK KG
Sbjct: 885  RTLHGLQPAQTSD--MFNDKSTYRELSEIADQAKRRAEVARLRERHTLKGHVESVVKQKG 942

Query: 284  LDIDTINQNYTV 249
            LDI+ I Q+YT+
Sbjct: 943  LDIEAIQQHYTL 954

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>PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) (Proton pump 5)|
          Length = 948

 Score =  201 bits (510), Expect = 2e-51
 Identities = 99/132 (75%), Positives = 115/132 (87%)
 Frame = -2

Query: 644  AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 465
            AGVIWL+S + Y PLD+ KF IR+VLSG+AW NLL+NKTAFTTK++YGK EREAQWA AQ
Sbjct: 819  AGVIWLYSFLTYIPLDLLKFGIRYVLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQ 878

Query: 464  RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 285
            RTLHGLQ  E   + +FN+K+SY ELS+IAEQAKRRAE+ RLRE+NTLKGHVESVVKLKG
Sbjct: 879  RTLHGLQPAE--KNNIFNEKNSYSELSQIAEQAKRRAEVVRLREINTLKGHVESVVKLKG 936

Query: 284  LDIDTINQNYTV 249
            LDIDTI Q+YTV
Sbjct: 937  LDIDTIQQHYTV 948

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>PMA6_ARATH (Q9SH76) ATPase 6, plasma membrane-type (EC 3.6.3.6) (Proton pump 6)|
          Length = 949

 Score =  196 bits (497), Expect = 6e-50
 Identities = 92/131 (70%), Positives = 115/131 (87%)
 Frame = -2

Query: 641  GVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQR 462
            GVIW++SIV Y PLDI KF  R+ LSG+AW+N+++N+TAFTTK++YG+GEREAQWA AQR
Sbjct: 823  GVIWIYSIVTYIPLDILKFITRYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQR 882

Query: 461  TLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGL 282
            TLHGL+ PE    ++F D ++Y ELSEIAEQAK+RAE+ARLRE++TLKGHVESVVKLKGL
Sbjct: 883  TLHGLKPPE----SMFEDTATYTELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGL 938

Query: 281  DIDTINQNYTV 249
            DID +NQ+YTV
Sbjct: 939  DIDNLNQHYTV 949

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>PMA2_ARATH (P19456) ATPase 2, plasma membrane-type (EC 3.6.3.6) (Proton pump 2)|
          Length = 947

 Score =  194 bits (493), Expect = 2e-49
 Identities = 100/132 (75%), Positives = 114/132 (86%)
 Frame = -2

Query: 644  AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 465
            AGVIWL+SIV YFPLD+FKF IR++LSG+AW NL +NKTAFT K++YGK EREAQWA AQ
Sbjct: 819  AGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWALAQ 878

Query: 464  RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 285
            RTLHGLQ  E  +  +F +K SYRELSEIAEQAKRRAEIARLREL+TLKGHVESVVKLKG
Sbjct: 879  RTLHGLQPKEAVN--IFPEKGSYRELSEIAEQAKRRAEIARLRELHTLKGHVESVVKLKG 936

Query: 284  LDIDTINQNYTV 249
            LDI+T   +YTV
Sbjct: 937  LDIET-PSHYTV 947

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>PMA1_ARATH (P20649) ATPase 1, plasma membrane-type (EC 3.6.3.6) (Proton pump 1)|
          Length = 948

 Score =  193 bits (491), Expect = 3e-49
 Identities = 97/132 (73%), Positives = 111/132 (84%)
 Frame = -2

Query: 644  AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 465
            AGVIW++SIV YFP DI KF IR++LSG+AW +L  N+TAFTTK++YG GEREAQWA AQ
Sbjct: 819  AGVIWIYSIVTYFPQDILKFAIRYILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQ 878

Query: 464  RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 285
            RTLHGLQ  E  +  +F +K SYRELSEIAEQAKRRAEIARLREL+TLKGHVESV KLKG
Sbjct: 879  RTLHGLQPKEDVN--IFPEKGSYRELSEIAEQAKRRAEIARLRELHTLKGHVESVAKLKG 936

Query: 284  LDIDTINQNYTV 249
            LDIDT   +YTV
Sbjct: 937  LDIDTAGHHYTV 948

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>PMA8_ARATH (Q9M2A0) ATPase 8, plasma membrane-type (EC 3.6.3.6) (Proton pump 8)|
          Length = 948

 Score =  192 bits (488), Expect = 7e-49
 Identities = 96/132 (72%), Positives = 111/132 (84%)
 Frame = -2

Query: 644  AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 465
            AG IW++SI+ Y PLDI KF IR+ L+G+AWDN++  KTAFTTK++YGKGEREAQWA AQ
Sbjct: 823  AGGIWVYSIITYIPLDILKFIIRYALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQ 882

Query: 464  RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 285
            RTLHGL  PE     +FND  +  ELSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKG
Sbjct: 883  RTLHGLPPPE----AMFNDNKN--ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKG 936

Query: 284  LDIDTINQNYTV 249
            LDIDTI Q+YTV
Sbjct: 937  LDIDTIQQHYTV 948

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>PMA3_ARATH (P20431) ATPase 3, plasma membrane-type (EC 3.6.3.6) (Proton pump 3)|
          Length = 948

 Score =  187 bits (475), Expect = 2e-47
 Identities = 96/132 (72%), Positives = 111/132 (84%)
 Frame = -2

Query: 644  AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 465
            AGVIWL+SIVFYFPLDI KF IR++L+G AW N++ N+TAFTTK+NYG  EREAQWA AQ
Sbjct: 820  AGVIWLYSIVFYFPLDIMKFAIRYILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQ 879

Query: 464  RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 285
            RTLHGLQ  E A+  +  ++  YRELSEIA QAKRRAEIARLREL+TLKGHVESVVKLKG
Sbjct: 880  RTLHGLQNTETAN--VVPERGGYRELSEIANQAKRRAEIARLRELHTLKGHVESVVKLKG 937

Query: 284  LDIDTINQNYTV 249
            LDI+T   +YTV
Sbjct: 938  LDIETAG-HYTV 948

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>PMA2_LYCES (P23980) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)|
           (Fragment)
          Length = 704

 Score =  182 bits (462), Expect = 7e-46
 Identities = 88/132 (66%), Positives = 112/132 (84%)
 Frame = -2

Query: 644 AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 465
           AGVIWL+++VFYFPLDI KF IR+ LSGRAWD +L+ + AFT K+++GK +RE QWA AQ
Sbjct: 576 AGVIWLYNLVFYFPLDIIKFLIRYALSGRAWDLVLEQRIAFTRKKDFGKEQRELQWAHAQ 635

Query: 464 RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 285
           RTLHGLQ P+     LF++ +++ EL+++AE+AKRRAEIAR REL+TLKGHVESVVKLKG
Sbjct: 636 RTLHGLQVPD---IKLFSEATNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKG 692

Query: 284 LDIDTINQNYTV 249
           LDI+TI Q+YTV
Sbjct: 693 LDIETIQQSYTV 704

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>PMA1_NICPL (Q08435) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)|
          Length = 957

 Score =  182 bits (461), Expect = 1e-45
 Identities = 87/132 (65%), Positives = 111/132 (84%)
 Frame = -2

Query: 644  AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 465
            AGVIW++++VFY PLDI KFFIR+ LSGRAWD + + + AFT K+++GK +RE QWA AQ
Sbjct: 829  AGVIWIYNLVFYIPLDIIKFFIRYALSGRAWDLVFERRIAFTRKKDFGKEQRELQWAHAQ 888

Query: 464  RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 285
            RTLHGLQ P+     LF++ +++ EL+++AE+AKRRAEIARLREL+TLKGHVESVVKLKG
Sbjct: 889  RTLHGLQVPDT---KLFSEATNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKG 945

Query: 284  LDIDTINQNYTV 249
            LDI+TI Q YTV
Sbjct: 946  LDIETIQQAYTV 957

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>PMA11_ARATH (Q9LV11) ATPase 11, plasma membrane-type (EC 3.6.3.6) (Proton pump|
            11)
          Length = 956

 Score =  180 bits (457), Expect = 3e-45
 Identities = 87/132 (65%), Positives = 111/132 (84%)
 Frame = -2

Query: 644  AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 465
            AGVIWL++IVFY PLDI KF IR+ LSGRAWD +++ + AFT ++++GK +RE QWA AQ
Sbjct: 828  AGVIWLYNIVFYIPLDIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQ 887

Query: 464  RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 285
            RTLHGLQAP+     +F +++ + ELS++AE+AKRRAEIARLREL+TLKGHVESVV+LKG
Sbjct: 888  RTLHGLQAPDA---KMFPERTHFNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKG 944

Query: 284  LDIDTINQNYTV 249
            LDI+TI Q YTV
Sbjct: 945  LDIETIQQAYTV 956

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>PMA4_ARATH (Q9SU58) ATPase 4, plasma membrane-type (EC 3.6.3.6) (Proton pump 4)|
          Length = 960

 Score =  180 bits (456), Expect = 4e-45
 Identities = 86/132 (65%), Positives = 110/132 (83%)
 Frame = -2

Query: 644  AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 465
            AGVIWL++I+FY PLD  KFFIR+ LSGRAWD +++ + AFT ++++GK +RE QWA AQ
Sbjct: 832  AGVIWLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQ 891

Query: 464  RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 285
            RTLHGLQAP+     +F D++   EL+++AE+AKRRAEIARLREL+TLKGHVESVV+LKG
Sbjct: 892  RTLHGLQAPDT---KMFTDRTHVSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKG 948

Query: 284  LDIDTINQNYTV 249
            LDI+TI Q YTV
Sbjct: 949  LDIETIQQAYTV 960

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>PMA3_NICPL (Q08436) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proton pump 3)|
          Length = 956

 Score =  179 bits (455), Expect = 5e-45
 Identities = 85/132 (64%), Positives = 111/132 (84%)
 Frame = -2

Query: 644  AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 465
            AGVIWL++IVFY PLD+  F IR+ LSG+AWD +++ + AFT K+++GK +RE QWA AQ
Sbjct: 828  AGVIWLYNIVFYIPLDLXXFLIRYALSGKAWDLVIEQRIAFTRKKDFGKEQRELQWAHAQ 887

Query: 464  RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 285
            RTLHGLQ P+P    +F++ +++ EL+++AE+AKRRAEIARLREL+TLKGHVESVVKLKG
Sbjct: 888  RTLHGLQVPDP---KIFSETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKG 944

Query: 284  LDIDTINQNYTV 249
            LDI+TI Q YTV
Sbjct: 945  LDIETIQQAYTV 956

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>PMA1_LYCES (P22180) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)|
          Length = 956

 Score =  179 bits (454), Expect = 6e-45
 Identities = 86/132 (65%), Positives = 111/132 (84%)
 Frame = -2

Query: 644  AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 465
            AGVIWL++IV Y PLD+ KF IR+ LSG+AWD +L+ + AFT K+++GK  RE QWA AQ
Sbjct: 828  AGVIWLYNIVTYIPLDLIKFLIRYALSGKAWDLVLEQRIAFTRKKDFGKELRELQWAHAQ 887

Query: 464  RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 285
            RTLHGLQ P+P    +F++ +++ EL+++AE+AKRRAEIARLREL+TLKGHVESVVKLKG
Sbjct: 888  RTLHGLQVPDP---KIFSETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKG 944

Query: 284  LDIDTINQNYTV 249
            LDI+TI Q+YTV
Sbjct: 945  LDIETIQQSYTV 956

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>PMA7_ARATH (Q9LY32) ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)|
          Length = 961

 Score =  137 bits (345), Expect = 3e-32
 Identities = 68/132 (51%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
 Frame = -2

Query: 641  GVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQR 462
            GVIW+F+IV Y  LD  KF +R+ LSG++WD +++ +TA T K+N+G+ ER A WAT +R
Sbjct: 834  GVIWIFNIVTYMLLDPIKFLVRYALSGKSWDRMVEGRTALTGKKNFGQEERMAAWATEKR 893

Query: 461  TLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGL 282
            T HGL+  +   +    +++S  EL+ +AE+AKRRAEIAR+REL TLKG VES  KLKG 
Sbjct: 894  TQHGLETGQKPVY----ERNSATELNNMAEEAKRRAEIARMRELQTLKGKVESAAKLKGY 949

Query: 281  DIDTIN-QNYTV 249
            D++  N  NYT+
Sbjct: 950  DLEDPNSNNYTI 961

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>PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6) (Proton pump|
            10)
          Length = 947

 Score =  107 bits (266), Expect = 4e-23
 Identities = 58/132 (43%), Positives = 80/132 (60%)
 Frame = -2

Query: 644  AGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQ 465
            AGVIWL+S++FY PLD+ KF   + LSG AW+ +L  KTAFT K++YGK +       +Q
Sbjct: 827  AGVIWLYSLIFYIPLDVIKFVFHYALSGEAWNLVLDRKTAFTYKKDYGKDDGSPNVTISQ 886

Query: 464  RTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKG 285
            R           S +    + S    S IAEQ +RRAEIARL E++++  H+ESV+KLK 
Sbjct: 887  R-----------SRSAEELRGSRSRASWIAEQTRRRAEIARLLEVHSVSRHLESVIKLKQ 935

Query: 284  LDIDTINQNYTV 249
            +D   I   +TV
Sbjct: 936  IDQRMIRAAHTV 947

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>PMAX_ARATH (Q9T0E0) Putative ATPase, plasma membrane-like|
          Length = 813

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 22/38 (57%), Positives = 33/38 (86%), Gaps = 3/38 (7%)
 Frame = -2

Query: 644 AGVIWLFSIVFYFPLDIFKFFIRFVLSGRA---WDNLL 540
           AGVIWL++I+F+FPLDI KF IR++L+G+A   +DN++
Sbjct: 733 AGVIWLYNIIFFFPLDIMKFGIRYILTGKAQSLFDNMV 770

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>PMA_AVESA (Q7M290) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)|
           (Fragments)
          Length = 110

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 26/38 (68%), Positives = 27/38 (71%)
 Frame = -2

Query: 476 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAK 363
           A A +TLHGLQAPE  S  L NDK    ELSEIAEQAK
Sbjct: 77  APALKTLHGLQAPESTSLNLPNDK----ELSEIAEQAK 110

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>CING_HUMAN (Q9P2M7) Cingulin|
          Length = 1197

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
 Frame = -2

Query: 488 EAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAE---IARLRELNTLK 318
           E Q    Q  L  +Q PEPA   L  D    REL E   + K+R E     R REL  LK
Sbjct: 436 ETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALK 495

Query: 317 GHVESVVKLKGLDIDTINQNY 255
           G ++  V  +  +++ + Q Y
Sbjct: 496 GALKEEVASRDQEVEHVRQQY 516

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>CING_MOUSE (P59242) Cingulin|
          Length = 1191

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
 Frame = -2

Query: 542 LQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAK 363
           LQN      +E   +   EAQ    Q  L   Q+P+    +L  D    REL E   + K
Sbjct: 412 LQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGK 471

Query: 362 RRAE---IARLRELNTLKGHVESVVKLKGLDIDTINQNY 255
           +R E     R REL  LKG ++  V     +++ +   Y
Sbjct: 472 QRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQY 510

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>KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-associated protein|
           5.3) (Ultrahigh sulfur keratin-associated protein 5.3)
           (Keratin-associated protein 5-9) (Keratin-associated
           protein 5.9) (UHS KerB-like)
          Length = 238

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 24/76 (31%), Positives = 28/76 (36%)
 Frame = +2

Query: 395 GSCSCR*RVCGKPAQVLEGHGVFSVR*PTVPPSHLCRSSLWW*KQSCSAGGCPRPCHSAQ 574
           GSC C    C KP     G G           S  C+SS    K SCS   C +PC S  
Sbjct: 122 GSCGCSQCSCYKPCCCSSGCG-----------SSCCQSSCC--KPSCSQSSCCKPCCSQS 168

Query: 575 IG*RT*KCQVGSRTQC 622
              +   C  G  + C
Sbjct: 169 SCCKPCCCSSGCGSSC 184

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>ESC1_SCHPO (Q04635) Protein esc1|
          Length = 413

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 28/101 (27%), Positives = 44/101 (43%)
 Frame = -3

Query: 553 GTTSCRTRLLSPPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSL 374
           G++S     + P   TT++   +HS +PHR        L+   T SS+T    VS   S+
Sbjct: 115 GSSSSYVYSVPPTNSTTSQASAKHSAVPHRSSQFQSTTLTPSTTDSSST---DVSSSDSV 171

Query: 373 SKPREELRLQG*GSSTHSRGTLSPW*SSRALTSTPSTKTTP 251
           S            SS+++  T+S       +TS  S+  TP
Sbjct: 172 STS---------ASSSNASNTVS-------VTSPASSSATP 196

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>ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor|
           p53-binding protein 2) (p53-binding protein 2) (p53BP2)
           (53BP2) (Bcl2-binding protein) (Bbp) (NY-REN-51 antigen)
          Length = 1128

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = -2

Query: 476 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVV 297
           AT ++ L  L+  +        ++   + L EIAE  +     A+L+++  LKGHVE   
Sbjct: 150 ATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQE-----AKLKKVRALKGHVEQKR 204

Query: 296 KLKGLDIDTINQ 261
              G  ++ I Q
Sbjct: 205 LSNGKLVEEIEQ 216

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>RSRC1_MOUSE (Q9DBU6) Arginine/serine-rich coiled coil protein 1|
          Length = 334

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
 Frame = -2

Query: 539 QNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYREL-SEIAEQAK 363
           + K + +     GK  R  +  +  RT      P P SH+  +++SS+R   S   ++ +
Sbjct: 79  RRKRSRSRSRGRGKPYRVQRSRSKSRTRRSRSRPRPRSHSRSSERSSHRRTRSRSRDRDR 138

Query: 362 RRAEIARLRELNTLKGHVESVVKLKGLDIDTI 267
           R+      RE    KG  + V  +K  D   I
Sbjct: 139 RKVRDKEKREKEKDKGKDKEVHSIKRGDSGNI 170

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>RNC_HUMAN (Q9NRR4) Ribonuclease III (EC 3.1.26.3) (RNase III) (Drosha) (p241)|
          Length = 1374

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 567  QHKSDEELENVKWEVEHNAEEPDNT 641
            + K  +EL+ ++WE EH   EPD T
Sbjct: 1345 ERKYRQELKEMRWEREHQEREPDET 1369

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>GCM2_MOUSE (O09102) Chorion-specific transcription factor GCMb (Glial cells|
           missing homolog 2) (GCM motif protein 2) (mGCMb)
          Length = 504

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = -2

Query: 458 LHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLD 279
           +H    PE  S T     +  R+++   +  KRR+E    R    ++GH+ S   L+  +
Sbjct: 156 VHDHPRPESKSETEGRRSALKRQMASFYQPQKRRSEEPEARSTQDIRGHLNSTAALEPTE 215

Query: 278 I 276
           +
Sbjct: 216 L 216

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>SMG_DROME (Q23972) Protein Smaug|
          Length = 999

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 264 PKLHRVRNLGIGPNNMTSVLERDWNG 187
           PK+H V+  G+GPNN  ++ +  WNG
Sbjct: 769 PKMHHVKPAGVGPNN-GNINKPRWNG 793

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>SBE2_YEAST (P42223) Protein SBE2|
          Length = 864

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 17/131 (12%)
 Frame = -3

Query: 556 PGTTSCRTRLLSPPKRTTAKVRGRHSGLPHREHSMAFKHLSR---LPTHSSTTRAATVSF 386
           PG+   +TR  S   +T   +    + +P R++S++   LSR   LP  S+TT +   S 
Sbjct: 183 PGSILQKTRTASSADKTICSMSTITTCIPSRQNSVSTPKLSRTVGLPGSSNTTNSIAASQ 242

Query: 385 LRSLSKPREELRLQG*GSSTHSRGTLSPW*SSRALTSTP--------------STKTTPC 248
              +S+    L+     ++T     L P      +T TP              +T+ TP 
Sbjct: 243 TSFISENDSPLKHHCMSTATIQEPKLMP------ITKTPYVHSNSTSVILPYKTTQLTPS 296

Query: 247 EEFGHWTKQHD 215
           + +    +Q+D
Sbjct: 297 QRYRLRKEQND 307

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>RNH2_SYNP7 (Q31PW0) Ribonuclease HII (EC 3.1.26.4) (RNase HII)|
          Length = 215

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -3

Query: 490 GRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSLSKPREELRL 347
           GRH G    +H  A   L   P H        + FLRSL +P +++ L
Sbjct: 174 GRHKGYGTAQHRQAILQLGPTPLH-------RIRFLRSLRQPSQQIDL 214

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>RNH2_SYNP6 (Q5N4B8) Ribonuclease HII (EC 3.1.26.4) (RNase HII)|
          Length = 215

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -3

Query: 490 GRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSLSKPREELRL 347
           GRH G    +H  A   L   P H        + FLRSL +P +++ L
Sbjct: 174 GRHKGYGTAQHRQAILQLGPTPLH-------RIRFLRSLRQPSQQIDL 214

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>TIM_MOUSE (Q9R1X4) Timeless homolog (mTim)|
          Length = 1197

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = -1

Query: 306  VRGEAQGP*HRHHQPKLH-----RVRNLGIGPNNMTSVLERDWNGAP 181
            V GE QGP   H    L      R R  G+GP    +  E +WN AP
Sbjct: 1112 VPGE-QGPSEEHRTEALRALLSARKRKAGLGPTEEEATGEEEWNSAP 1157

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>POLN_SPDV (Q8JJX1) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-)
            (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.1
          Length = 2601

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
 Frame = -3

Query: 553  GTTSCRTRLLSPPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSL 374
            GT S  +R+ S    T++   G     P R  +++   L+    HS + R+A    +R+ 
Sbjct: 1815 GTESRSSRMGSQSSVTSSA--GSVPPAPRRAPAVSAASLAS-SAHSRSVRSAPA--MRAA 1869

Query: 373  SKPREELRLQG*GSSTHSRGTLSPW*SSRALTSTPSTKTTPCEEFGHWTKQHD-IRIGAR 197
            S     +R    GS+ H  G  S   S R  +  PS+ +TP    G    Q D +R+ AR
Sbjct: 1870 SAGARSVRSAQSGSTGHRAGAFSVAGSVRQPSGPPSSVSTPAAIRGLTRDQFDAVRVRAR 1929

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>ASPP2_MOUSE (Q8CG79) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor|
           p53-binding protein 2) (p53BP2) (53BP2) (Fragment)
          Length = 1088

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = -2

Query: 476 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVV 297
           AT ++ L  L+  +        ++   + L EIAE  +     A+L+++  LKGHVE   
Sbjct: 110 ATKEQRLKFLKQQDQRQQQQAAEQEKLKRLREIAESQE-----AKLKKVRALKGHVEQKR 164

Query: 296 KLKGLDIDTINQ 261
              G  ++ I Q
Sbjct: 165 LSNGKLVEEIEQ 176

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>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger|
           protein rfp-1)
          Length = 828

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 20/75 (26%), Positives = 35/75 (46%)
 Frame = -2

Query: 521 TTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIAR 342
           T KE Y K  ++++W   + T++ L+       +L     S  +  +  E+A ++   A 
Sbjct: 439 TVKEEYNKTVKQSEWDEMKATVNTLR-------SLNKTMKSQMQRMKDREKASQKEHSAV 491

Query: 341 LRELNTLKGHVESVV 297
             EL TLK  +E  V
Sbjct: 492 KTELKTLKDQLEKSV 506


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,758,579
Number of Sequences: 219361
Number of extensions: 2048215
Number of successful extensions: 5511
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 5281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5492
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result