| Clone Name | rbags31g19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U19999.1|AFU19999 Avena fatua nondormancy-associated clone AFN2 putative ORF1 mRNA, partial cds Length = 428 Score = 278 bits (140), Expect = 2e-71 Identities = 290/338 (85%), Gaps = 4/338 (1%) Strand = Plus / Minus Query: 71 caacaaacagagaaatccaaaacttagaccttttaagcaataccttagacgttcatagct 130 |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct: 353 caacaaacagagaaatccaaaacttagaccttttaagcaacacctttgacgttcataact 294 Query: 131 tacaacagtaaagaagaacaaaacttatatgaattaaacagatgcagt-cagacctatga 189 | |||| ||||| || | |||||||||| ||| |||||||||||| ||||||||||| Sbjct: 293 agtagcagtgaagaaaaatagaacttatatggattgaacagatgcagttcagacctatga 234 Query: 190 tctgcgatgggcatgagcagtcatgaccaatggcctaggtagacatgctcactcattcca 249 ||||| ||| | || | ||||||| ||||| ||| ||||||| | | || | |||| Sbjct: 233 tctgcagtggtccagaaccgtcatgagcaatgctctaagtagacacgattgcttactcca 174 Query: 250 ccataccagcatctgcaccatcttcctcctcttcctcctcatcatca---ccaagggtta 306 ||||||||||| ||||| ||||||||||||| |||||||||||| |||||| | | Sbjct: 173 ccataccagcaggtgcactgccttcctcctcttcgtcctcatcatcatcaccaaggctca 114 Query: 307 ggtcctcaatcaactcctcaattggcacagtagggagatcatcaccaaccgtggatgcca 366 | |||||||||||||||||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 113 gatcctcaatcaactcctcaattggcacagtagggacatcatcaccaattgttgatgcca 54 Query: 367 tttctgacctgtagtcctcgttcttgtacagatttatc 404 ||||||||||||||||||| |||||||||||||||||| Sbjct: 53 tttctgacctgtagtcctcattcttgtacagatttatc 16
>gb|AY109670.1| Zea mays CL52253_1 mRNA sequence Length = 1069 Score = 103 bits (52), Expect = 7e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 294 tcaccaagggttaggtcctcaatcaactcctcaattggcacagtagggagatcatcacca 353 ||||||||||| | ||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 268 tcaccaagggtcaagtcctcaatcagctcctcaattggcaccgtagggatatcatcacca 327 Query: 354 accgtggatgccatttctgacctgtagtcctc 385 || || |||||||| || ||||| |||||||| Sbjct: 328 actgttgatgccatctcagacctatagtcctc 359 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 501 tcttcctcaacaggcagcctcttcagcttccatctgcgtgtgcgtcgcctcttctcatag 560 |||||||| || |||| |||||| |||||||||| |||||||| |||||||||||||| Sbjct: 475 tcttcctccaccggcaacctcttaagcttccatcgccgtgtgcgaggcctcttctcatag 534 Query: 561 ctcttcttgacaagaatcacttcagg 586 |||||||||||||||| ||| ||||| Sbjct: 535 ctcttcttgacaagaaccacctcagg 560
>ref|NM_197857.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0003O19.24), mRNA Length = 2136 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 282 tcctcctcatcatcaccaagggttaggtcctcaatcaactcctcaattggcacagtaggg 341 |||||||||||||||||||| ||||||||||||| | |||||||| |||||||| || Sbjct: 2090 tcctcctcatcatcaccaagacttaggtcctcaattagttcctcaatcggcacagtggga 2031 Query: 342 agatcatcaccaaccgtggatgccatttctgacctgtagtcctcgttcttgtacagat 399 | ||||||||||| || |||||||| || |||||||||||||| | |||||| |||| Sbjct: 2030 acatcatcaccaatagtagatgccatctccgacctgtagtcctcatccttgtatagat 1973 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Minus Query: 516 agcctcttcagcttccatctgcgtgtgcgtcgcctcttctcatagctcttcttgacaaga 575 ||||||||||||||||||| |||||||||| ||||||| | |||||||||| |||||| Sbjct: 1856 agcctcttcagcttccatcggcgtgtgcgtggcctcttggcgaagctcttcttaacaaga 1797 Query: 576 atcacttcaggcaaattctggcgtaataaagccttgtccatatcatcatcattcatgttg 635 || |||||||||| | | ||||| | | ||| ||||||| ||||||||||||| |||| Sbjct: 1796 atgacttcaggcagactgtggcgcatcatagctgtgtccatgtcatcatcattcaagttg 1737 Query: 636 gcacc 640 ||||| Sbjct: 1736 gcacc 1732
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 282 tcctcctcatcatcaccaagggttaggtcctcaatcaactcctcaattggcacagtaggg 341 |||||||||||||||||||| ||||||||||||| | |||||||| |||||||| || Sbjct: 22262806 tcctcctcatcatcaccaagacttaggtcctcaattagttcctcaatcggcacagtggga 22262865 Query: 342 agatcatcaccaaccgtggatgccatttctgacctgtagtcctcgttcttgtacagat 399 | ||||||||||| || |||||||| || |||||||||||||| | |||||| |||| Sbjct: 22262866 acatcatcaccaatagtagatgccatctccgacctgtagtcctcatccttgtatagat 22262923 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 516 agcctcttcagcttccatctgcgtgtgcgtcgcctcttctcatagctcttcttgacaaga 575 ||||||||||||||||||| |||||||||| ||||||| | |||||||||| |||||| Sbjct: 22263040 agcctcttcagcttccatcggcgtgtgcgtggcctcttggcgaagctcttcttaacaaga 22263099 Query: 576 atcacttcaggcaaattctggcgtaataaagccttgtccatatcatcatcattcatgttg 635 || |||||||||| | | ||||| | | ||| ||||||| ||||||||||||| |||| Sbjct: 22263100 atgacttcaggcagactgtggcgcatcatagctgtgtccatgtcatcatcattcaagttg 22263159 Query: 636 gcacc 640 ||||| Sbjct: 22263160 gcacc 22263164 Score = 71.9 bits (36), Expect = 3e-09 Identities = 49/52 (94%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 145 agaacaaaacttatatgaattaaacagatgcag-tcagacctatgatctgcg 195 ||||||||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 22262653 agaacaaaacttatacggattaaacagatgcagttcagacctatgatctgcg 22262704
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 282 tcctcctcatcatcaccaagggttaggtcctcaatcaactcctcaattggcacagtaggg 341 |||||||||||||||||||| ||||||||||||| | |||||||| |||||||| || Sbjct: 80049 tcctcctcatcatcaccaagacttaggtcctcaattagttcctcaatcggcacagtggga 80108 Query: 342 agatcatcaccaaccgtggatgccatttctgacctgtagtcctcgttcttgtacagat 399 | ||||||||||| || |||||||| || |||||||||||||| | |||||| |||| Sbjct: 80109 acatcatcaccaatagtagatgccatctccgacctgtagtcctcatccttgtatagat 80166 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 516 agcctcttcagcttccatctgcgtgtgcgtcgcctcttctcatagctcttcttgacaaga 575 ||||||||||||||||||| |||||||||| ||||||| | |||||||||| |||||| Sbjct: 80283 agcctcttcagcttccatcggcgtgtgcgtggcctcttggcgaagctcttcttaacaaga 80342 Query: 576 atcacttcaggcaaattctggcgtaataaagccttgtccatatcatcatcattcatgttg 635 || |||||||||| | | ||||| | | ||| ||||||| ||||||||||||| |||| Sbjct: 80343 atgacttcaggcagactgtggcgcatcatagctgtgtccatgtcatcatcattcaagttg 80402 Query: 636 gcacc 640 ||||| Sbjct: 80403 gcacc 80407 Score = 71.9 bits (36), Expect = 3e-09 Identities = 49/52 (94%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 145 agaacaaaacttatatgaattaaacagatgcag-tcagacctatgatctgcg 195 ||||||||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 79896 agaacaaaacttatacggattaaacagatgcagttcagacctatgatctgcg 79947
>dbj|AK101216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B21, full insert sequence Length = 2004 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 282 tcctcctcatcatcaccaagggttaggtcctcaatcaactcctcaattggcacagtaggg 341 |||||||||||||||||||| ||||||||||||| | |||||||| |||||||| || Sbjct: 1572 tcctcctcatcatcaccaagacttaggtcctcaattagttcctcaatcggcacagtggga 1513 Query: 342 agatcatcaccaaccgtggatgccatttctgacctgtagtcctcgttcttgtacagat 399 | ||||||||||| || |||||||| || |||||||||||||| | |||||| |||| Sbjct: 1512 acatcatcaccaatagtagatgccatctccgacctgtagtcctcatccttgtatagat 1455 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Minus Query: 516 agcctcttcagcttccatctgcgtgtgcgtcgcctcttctcatagctcttcttgacaaga 575 ||||||||||||||||||| |||||||||| ||||||| | |||||||||| |||||| Sbjct: 1338 agcctcttcagcttccatcggcgtgtgcgtggcctcttggcgaagctcttcttaacaaga 1279 Query: 576 atcacttcaggcaaattctggcgtaataaagccttgtccatatcatcatcattcatgttg 635 || |||||||||| | | ||||| | | ||| ||||||| ||||||||||||| |||| Sbjct: 1278 atgacttcaggcagactgtggcgcatcatagctgtgtccatgtcatcatcattcaagttg 1219 Query: 636 gcacc 640 ||||| Sbjct: 1218 gcacc 1214 Score = 71.9 bits (36), Expect = 3e-09 Identities = 49/52 (94%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 145 agaacaaaacttatatgaattaaacagatgcag-tcagacctatgatctgcg 195 ||||||||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 1725 agaacaaaacttatacggattaaacagatgcagttcagacctatgatctgcg 1674
>dbj|AK073206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033004L13, full insert sequence Length = 1460 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 282 tcctcctcatcatcaccaagggttaggtcctcaatcaactcctcaattggcacagtaggg 341 |||||||||||||||||||| ||||||||||||| | |||||||| |||||||| || Sbjct: 605 tcctcctcatcatcaccaagacttaggtcctcaattagttcctcaatcggcacagtggga 546 Query: 342 agatcatcaccaaccgtggatgccatttctgacctgtagtcctcgttcttgtacagat 399 | ||||||||||| || |||||||| || |||||||||||||| | |||||| |||| Sbjct: 545 acatcatcaccaatagtagatgccatctccgacctgtagtcctcatccttgtatagat 488 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Minus Query: 516 agcctcttcagcttccatctgcgtgtgcgtcgcctcttctcatagctcttcttgacaaga 575 ||||||||||||||||||| |||||||||| ||||||| | |||||||||| |||||| Sbjct: 371 agcctcttcagcttccatcggcgtgtgcgtggcctcttggcgaagctcttcttaacaaga 312 Query: 576 atcacttcaggcaaattctggcgtaataaagccttgtccatatcatcatcattcatgttg 635 || |||||||||| | | ||||| | | ||| ||||||| ||||||||||||| |||| Sbjct: 311 atgacttcaggcagactgtggcgcatcatagctgtgtccatgtcatcatcattcaagttg 252 Query: 636 gcacc 640 ||||| Sbjct: 251 gcacc 247 Score = 71.9 bits (36), Expect = 3e-09 Identities = 49/52 (94%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 145 agaacaaaacttatatgaattaaacagatgcag-tcagacctatgatctgcg 195 ||||||||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 758 agaacaaaacttatacggattaaacagatgcagttcagacctatgatctgcg 707
>dbj|AK060642.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F06, full insert sequence Length = 1620 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 282 tcctcctcatcatcaccaagggttaggtcctcaatcaactcctcaattggcacagtaggg 341 |||||||||||||||||||| ||||||||||||| | |||||||| |||||||| || Sbjct: 1562 tcctcctcatcatcaccaagacttaggtcctcaattagttcctcaatcggcacagtggga 1503 Query: 342 agatcatcaccaaccgtggatgccatttctgacctgtagtcctcgttcttgtacagat 399 | ||||||||||| || |||||||| || |||||||||||||| | |||||| |||| Sbjct: 1502 acatcatcaccaatagtagatgccatctccgacctgtagtcctcatccttgtatagat 1445 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Minus Query: 516 agcctcttcagcttccatctgcgtgtgcgtcgcctcttctcatagctcttcttgacaaga 575 ||||||||||||||||||| |||||||||| ||||||| | |||||||||| |||||| Sbjct: 1328 agcctcttcagcttccatcggcgtgtgcgtggcctcttggcgaagctcttcttaacaaga 1269 Query: 576 atcacttcaggcaaattctggcgtaataaagccttgtccatatcatcatcattcatgttg 635 || |||||||||| | | ||||| | | ||| ||||||| ||||||||||||| |||| Sbjct: 1268 atgacttcaggcagactgtggcgcatcatagctgtgtccatgtcatcatcattcaagttg 1209 Query: 636 gcacc 640 ||||| Sbjct: 1208 gcacc 1204
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 282 tcctcctcatcatcaccaagggttaggtcctcaatcaactcctcaattggcacagtaggg 341 |||||||||||||||||||| ||||||||||||| | |||||||| |||||||| || Sbjct: 22274874 tcctcctcatcatcaccaagacttaggtcctcaattagttcctcaatcggcacagtggga 22274933 Query: 342 agatcatcaccaaccgtggatgccatttctgacctgtagtcctcgttcttgtacagat 399 | ||||||||||| || |||||||| || |||||||||||||| | |||||| |||| Sbjct: 22274934 acatcatcaccaatagtagatgccatctccgacctgtagtcctcatccttgtatagat 22274991 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 516 agcctcttcagcttccatctgcgtgtgcgtcgcctcttctcatagctcttcttgacaaga 575 ||||||||||||||||||| |||||||||| ||||||| | |||||||||| |||||| Sbjct: 22275108 agcctcttcagcttccatcggcgtgtgcgtggcctcttggcgaagctcttcttaacaaga 22275167 Query: 576 atcacttcaggcaaattctggcgtaataaagccttgtccatatcatcatcattcatgttg 635 || |||||||||| | | ||||| | | ||| ||||||| ||||||||||||| |||| Sbjct: 22275168 atgacttcaggcagactgtggcgcatcatagctgtgtccatgtcatcatcattcaagttg 22275227 Query: 636 gcacc 640 ||||| Sbjct: 22275228 gcacc 22275232 Score = 71.9 bits (36), Expect = 3e-09 Identities = 49/52 (94%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 145 agaacaaaacttatatgaattaaacagatgcag-tcagacctatgatctgcg 195 ||||||||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 22274721 agaacaaaacttatacggattaaacagatgcagttcagacctatgatctgcg 22274772
>ref|NM_001008208.1| Xenopus tropicalis eif5 protein (eif5), mRNA Length = 2003 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatcacca 299 ||||||||||||| |||||||||||||||||| Sbjct: 1520 catcttcctcctcctcctcctcatcatcacca 1489
>gb|BC081334.1| Xenopus tropicalis eif5 protein, mRNA (cDNA clone MGC:89511 IMAGE:6992599), complete cds Length = 2003 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatcacca 299 ||||||||||||| |||||||||||||||||| Sbjct: 1520 catcttcctcctcctcctcctcatcatcacca 1489
>ref|XM_814823.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506789.160) partial mRNA Length = 1770 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||||||||||||||||||| Sbjct: 683 tcttcctcctcttcctcctcatcatca 657
>gb|AC171684.1| Mus musculus BAC clone RP23-69D21 from chromosome 8, complete sequence Length = 255017 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 265 caccatcttcctcctcttcctcctcatcatcacca 299 ||||||| |||||||| |||||||||||||||||| Sbjct: 159568 caccatcctcctcctcctcctcctcatcatcacca 159534
>ref|XM_611894.2| PREDICTED: Bos taurus similar to mesoderm induction early response 1 (LOC540522), partial mRNA Length = 427 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 256 cagcatctgcaccatcttcctcctcttcctcctc 289 |||||||| || |||||||||||||||||||||| Sbjct: 118 cagcatcttcatcatcttcctcctcttcctcctc 85
>ref|NM_121058.2| Arabidopsis thaliana unknown protein AT5G10200 mRNA, complete cds Length = 2517 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatca 296 ||||||||||||| ||||||||||||||| Sbjct: 2059 catcttcctcctcctcctcctcatcatca 2031
>gb|AE014851.1| Plasmodium falciparum 3D7 chromosome 12, section 8 of 9 of the complete sequence Length = 251762 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatca 296 ||||||||||||| ||||||||||||||| Sbjct: 236727 catcttcctcctcctcctcctcatcatca 236699
>ref|XM_843253.1| PREDICTED: Canis familiaris hypothetical protein LOC606822 (LOC606822), mRNA Length = 3393 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatca 296 |||||||||||||||||||||| |||||| Sbjct: 1153 catcttcctcctcttcctcctcctcatca 1125
>ref|XM_381610.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01434.1) partial mRNA Length = 1134 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatca 296 |||| |||||||||||||||||||||||| Sbjct: 508 catcctcctcctcttcctcctcatcatca 480
>emb|AL360334.1|ATF18D22 Arabidopsis thaliana DNA chromosome 5, BAC clone F18D22 (ESSA project) Length = 57180 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatca 296 ||||||||||||| ||||||||||||||| Sbjct: 8952 catcttcctcctcctcctcctcatcatca 8924
>emb|AJ720180.1| Gallus gallus mRNA for hypothetical protein, clone 12b11 Length = 1786 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 271 cttcctcctcttcctcctcatcatc 295 ||||||||||||||||||||||||| Sbjct: 248 cttcctcctcttcctcctcatcatc 224
>ref|NM_001012771.1| Gallus gallus eukaryotic translation initiation factor 3, subunit 1 alpha, 35kDa (EIF3S1), mRNA Length = 1786 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 271 cttcctcctcttcctcctcatcatc 295 ||||||||||||||||||||||||| Sbjct: 248 cttcctcctcttcctcctcatcatc 224
>emb|CR387918.1| Gallus gallus finished cDNA, clone ChEST178a13 Length = 1585 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 271 cttcctcctcttcctcctcatcatc 295 ||||||||||||||||||||||||| Sbjct: 47 cttcctcctcttcctcctcatcatc 23
>emb|CR353819.1| Gallus gallus finished cDNA, clone ChEST150c18 Length = 883 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 271 cttcctcctcttcctcctcatcatc 295 ||||||||||||||||||||||||| Sbjct: 819 cttcctcctcttcctcctcatcatc 795
>emb|AL356332.1|ATT31P16 Arabidopsis thaliana DNA chromosome 5, BAC clone T31P16 (ESSA project) Length = 80088 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatca 296 ||||||||||||| ||||||||||||||| Sbjct: 68854 catcttcctcctcctcctcctcatcatca 68826
>gb|L42571.1|CRUUBF2R Cricetulus griseus ribosomal transcription factor (UBF2) mRNA, complete cds Length = 2305 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatca 296 ||||||||||||||||||| ||||||||| Sbjct: 1984 catcttcctcctcttcctcttcatcatca 1956
>gb|L42570.1|CRUUBF1R Cricetulus griseus ribosomal transcription factor (UBF1) mRNA, complete cds Length = 2416 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatca 296 ||||||||||||||||||| ||||||||| Sbjct: 2095 catcttcctcctcttcctcttcatcatca 2067
>ref|XM_414663.1| PREDICTED: Gallus gallus similar to KIAA1352 protein (LOC416347), mRNA Length = 3853 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatca 293 |||||||||||||||||||||||| Sbjct: 575 tcttcctcctcttcctcctcatca 552
>gb|AC183807.3| Pan troglodytes BAC clone CH251-65H22 from chromosome 9, complete sequence Length = 171193 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatca 296 |||||||||||||||||||||||| Sbjct: 44014 tcctcctcttcctcctcatcatca 43991
>ref|NM_011511.1| Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 1, mRNA Length = 6034 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||||| ||||| Sbjct: 3039 catcttcctcctcttcctcctcttcatc 3012
>ref|NM_021042.1| Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 4, mRNA Length = 5976 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||||| ||||| Sbjct: 2990 catcttcctcctcttcctcctcttcatc 2963
>ref|NM_021041.1| Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 2, mRNA Length = 6210 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||||| ||||| Sbjct: 3039 catcttcctcctcttcctcctcttcatc 3012
>ref|NM_021043.1| Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 3, mRNA Length = 6081 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||||| ||||| Sbjct: 3095 catcttcctcctcttcctcctcttcatc 3068
>gb|BC016094.1| Mus musculus solute carrier family 24 (sodium/potassium/calcium exchanger), member 1, mRNA (cDNA clone MGC:27617 IMAGE:4504496), complete cds Length = 5244 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||||| ||||| Sbjct: 3009 catcttcctcctcttcctcctcttcatc 2982
>ref|NM_144813.1| Mus musculus solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 (Slc24a1), mRNA Length = 5244 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||||| ||||| Sbjct: 3009 catcttcctcctcttcctcctcttcatc 2982
>ref|XM_549223.2| PREDICTED: Canis familiaris similar to Cullin-4B (CUL-4B), transcript variant 1 (LOC492102), mRNA Length = 3760 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatcatcaccaa 300 |||||||||||||||||||| ||||||| Sbjct: 666 tcctcctcttcctcctcatcttcaccaa 693
>ref|XM_859535.1| PREDICTED: Canis familiaris similar to Cullin-4B (CUL-4B), transcript variant 3 (LOC492102), mRNA Length = 3533 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatcatcaccaa 300 |||||||||||||||||||| ||||||| Sbjct: 481 tcctcctcttcctcctcatcttcaccaa 508
>ref|XM_846813.1| PREDICTED: Canis familiaris similar to Cullin-4B (CUL-4B), transcript variant 2 (LOC492102), mRNA Length = 3718 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatcatcaccaa 300 |||||||||||||||||||| ||||||| Sbjct: 666 tcctcctcttcctcctcatcttcaccaa 693
>ref|XM_803496.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053510411.10) partial mRNA Length = 2562 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatcacca 299 |||| |||||||| |||||||||||||||||| Sbjct: 2113 catcctcctcctcctcctcctcatcatcacca 2082
>gb|BC044859.1| Mus musculus solute carrier family 24 (sodium/potassium/calcium exchanger), member 1, mRNA (cDNA clone IMAGE:5363577), with apparent retained intron Length = 4689 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||||| ||||| Sbjct: 2445 catcttcctcctcttcctcctcttcatc 2418
>ref|XM_537665.2| PREDICTED: Canis familiaris similar to src family associated phosphoprotein 1 (LOC480543), mRNA Length = 1210 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatcac 297 ||||||||||||||||||||||| |||| Sbjct: 704 tcttcctcctcttcctcctcatcttcac 677
>ref|XM_718774.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03677) partial mRNA Length = 2496 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||||||||| ||||||||||||||||| Sbjct: 2389 catcttcctcatcttcctcctcatcatc 2362 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 ||||||||||||| || ||||||||||| Sbjct: 2380 catcttcctcctcatcatcctcatcatc 2353
>ref|XM_722670.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06994) partial mRNA Length = 1713 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||||||||| ||||||||||||||||| Sbjct: 415 catcttcctcatcttcctcctcatcatc 388
>gb|AC121236.18| Medicago truncatula clone mth2-12m19, complete sequence Length = 124839 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatca 296 |||||||||||||||||||||||| Sbjct: 89659 tcctcctcttcctcctcatcatca 89636 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatca 296 ||||||||||||||||| |||||| Sbjct: 111553 tcctcctcttcctcctcctcatca 111530 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatca 296 ||||||||||||||||| |||||| Sbjct: 76896 tcctcctcttcctcctcctcatca 76873
>gb|AC151964.12| Medicago truncatula clone mth2-47g17, complete sequence Length = 117929 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatca 296 |||||||||||||||||||||||| Sbjct: 52725 tcctcctcttcctcctcatcatca 52702 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatca 296 ||||||||||||||||| |||||| Sbjct: 74616 tcctcctcttcctcctcctcatca 74593 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatca 296 ||||||||||||||||| |||||| Sbjct: 39962 tcctcctcttcctcctcctcatca 39939
>gb|AC182586.3| Pan troglodytes BAC clone CH251-499F21 from chromosome 9, complete sequence Length = 208237 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatca 296 |||||||||||||||||||||||| Sbjct: 3378 tcctcctcttcctcctcatcatca 3355
>emb|AL691447.18| Human DNA sequence from clone RP11-307E17 on chromosome 9 Contains the gene for zinc finger protein 169, a voltage-dependent anion channel 1 (VDAC1) pseudogene, a novel gene (DKFZp434I1117), a novel pseudogene, a novel gene, the 5' end of a gene for a novel protein similar to mouse hippocampus abundant gene transcript 1(HIAT1) and three CpG islands, complete sequence Length = 171255 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatcatca 296 |||||||||||||||||||||||| Sbjct: 99114 tcctcctcttcctcctcatcatca 99137
>emb|AL356867.23| Human DNA sequence from clone RP1-20N18 on chromosome 1 Contains a novel gene, the SPRR4 gene for small proline rich protein 4, the SPRR1A gene for small proline-rich protein 1A, the SPRR3 gene for small proline-rich protein 3, a small proline-rich protein 3 (SPRR3) pseudogene, the SPRR1B gene for small proline-rich protein 1B (cornifin), the SPRR2D gene for small proline-rich protein 2D, the SPRR2A gene for small proline-rich protein 2A and the 3' end of the SPRR2B gene for small proline-rich protein 2B, complete sequence Length = 147803 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 265 caccatcttcctcctcttcctcctcatcatca 296 ||||||| |||||||| ||||||||||||||| Sbjct: 132055 caccatcctcctcctcctcctcctcatcatca 132024
>emb|AL158827.27| Human DNA sequence from clone RP11-330M2 on chromosome 9 Contains a pseudogene similar to part of a zinc finger protein, two novel pseudogenes, a novel gene similar to DKFZP434I1117, a novel pseudogene (FLJ23476), two novel gene, a novel gene similar to MGC12954 and four CpG islands, complete sequence Length = 186108 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatca 296 |||||||||||||||||||||||| Sbjct: 108958 tcctcctcttcctcctcatcatca 108935
>emb|CR390842.1| Gallus gallus finished cDNA, clone ChEST973g22 Length = 997 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatca 293 |||||||||||||||||||||||| Sbjct: 202 tcttcctcctcttcctcctcatca 179
>ref|NM_001003268.1| Canis familiaris transcription factor 4 (TCF4), mRNA Length = 2648 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatcacca 299 |||| |||||||| |||||||||||||||||| Sbjct: 114 catcatcctcctcctcctcctcatcatcacca 83
>emb|CT033781.12| Mouse DNA sequence from clone RP24-85H21 on chromosome 13, complete sequence Length = 206653 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 269 atcttcctcctcttcctcctcatc 292 |||||||||||||||||||||||| Sbjct: 179479 atcttcctcctcttcctcctcatc 179502
>gb|AC140243.2| Mus musculus BAC clone RP23-470F3 from 9, complete sequence Length = 201295 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||||| ||||| Sbjct: 26586 catcttcctcctcttcctcctcttcatc 26559
>gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, complete sequence Length = 189301 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatca 296 |||||||||||||||||||||||| Sbjct: 164642 tcctcctcttcctcctcatcatca 164619
>gb|AF003531.1|MMAF003531 Mus musculus sulfonylurea receptor 2A (SUR2) mRNA, alternatively spliced, complete cds Length = 5976 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||||| ||||| Sbjct: 2990 catcttcctcctcttcctcctcttcatc 2963
>gb|U97066.1|MMU97066 Mus musculus sulfonylurea receptor 2B (SUR2) mRNA, alternatively spliced, complete cds Length = 6081 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||||| ||||| Sbjct: 3095 catcttcctcctcttcctcctcttcatc 3068
>dbj|AP004931.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13G01, TM0093b, complete sequence Length = 41920 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 269 atcttcctcctcttcctcctcatcatca 296 ||||||||||||||||||||| |||||| Sbjct: 27580 atcttcctcctcttcctcctcctcatca 27553
>emb|AL772369.6| Human DNA sequence from clone RP11-395L9 on chromosome 9, complete sequence Length = 71591 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatcatca 296 |||||||||||||||||||||||| Sbjct: 9344 tcctcctcttcctcctcatcatca 9367
>emb|X51448.1|CFTHYRPR Dog mRNA for putative transcription factor recognizing thyroglobulin promoter Length = 2648 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatcacca 299 |||| |||||||| |||||||||||||||||| Sbjct: 114 catcatcctcctcctcctcctcatcatcacca 83
>emb|AL772267.9| Human DNA sequence from clone RP13-37K15 on chromosome 9, complete sequence Length = 115952 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatcatca 296 |||||||||||||||||||||||| Sbjct: 55697 tcctcctcttcctcctcatcatca 55720
>gb|M55017.1|RATNUCIA2 Rat nucleolin gene Length = 896 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 265 caccatcttcctcctcttcctcctcatcatca 296 |||||||||||||||| ||||| ||||||||| Sbjct: 853 caccatcttcctcctcctcctcttcatcatca 822
>dbj|D86038.2| Mus musculus mRNA for sulfonylurea receptor 2B, complete cds Length = 6034 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||||| ||||| Sbjct: 3039 catcttcctcctcttcctcctcttcatc 3012
>dbj|D86037.2| Mus musculus mRNA for sulfonylurea receptor 2A, complete cds Length = 6210 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||||| ||||| Sbjct: 3039 catcttcctcctcttcctcctcttcatc 3012
>ref|NM_119144.1| Arabidopsis thaliana unknown protein AT4G29980 mRNA, complete cds Length = 630 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatcatc 295 ||||||||||||||||||||||| Sbjct: 57 tcctcctcttcctcctcatcatc 79
>gb|AC120437.7| Mus musculus chromosome 5, clone RP24-571K14, complete sequence Length = 147493 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 15305 tcttcctcctcctcctcctcatcatca 15279
>ref|XM_636680.1| Dictyostelium discoideum hypothetical protein (DDB0218164), partial mRNA Length = 6180 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatcaccaa 300 |||||||||||||||||||| || ||||||| Sbjct: 4237 tcttcctcctcttcctcctcttcttcaccaa 4267
>gb|AC169670.2| Mus musculus chromosome 5, clone wi1-1965K12, complete sequence Length = 39795 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 6499 tcttcctcctcctcctcctcatcatca 6525
>ref|XM_522218.1| PREDICTED: Pan troglodytes similar to olfactory receptor OR11-279 (LOC466818), mRNA Length = 996 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 119 tcttcctcctcttcctcctcatc 141
>gb|DQ214972.1| Taeniopygia guttata clone 0058P0001D06 eukaryotic translation initiation factor 3 subunit 1 variant 2-like mRNA, complete sequence Length = 882 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatc 295 ||||||||||||||||||||||| Sbjct: 183 tcctcctcttcctcctcatcatc 161
>gb|DQ214971.1| Taeniopygia guttata clone 0061P0024E06 eukaryotic translation initiation factor 3 subunit 1 variant 2-like mRNA, complete sequence Length = 820 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatc 295 ||||||||||||||||||||||| Sbjct: 118 tcctcctcttcctcctcatcatc 96
>gb|DQ214970.1| Taeniopygia guttata clone 0058P0030G03 eukaryotic translation initiation factor 3 subunit 1 variant 2-like mRNA, complete sequence Length = 875 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatc 295 ||||||||||||||||||||||| Sbjct: 175 tcctcctcttcctcctcatcatc 153
>ref|NM_199230.1| Rattus norvegicus activin A receptor, type 1B (Acvr1b), mRNA Length = 2275 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||||||||| ||||||||| Sbjct: 417 tcttcctcctcttcctcatcatcatca 443
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||||||| |||||||| Sbjct: 566075 tcttcctcctcttcctccccatcatca 566101
>gb|AC091330.18| Trypanosoma brucei chromosome 3 clone RPCI93-48O8, complete sequence Length = 138368 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||||||| |||||||| Sbjct: 137083 tcttcctcctcttcctccccatcatca 137057
>gb|AC105379.11| Trypanosoma brucei chromosome 3 clone RPCI93-30P12, complete sequence Length = 165197 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||||||| |||||||| Sbjct: 160121 tcttcctcctcttcctccccatcatca 160147
>ref|XM_413721.1| PREDICTED: Gallus gallus similar to mKIAA0211 protein (LOC415335), mRNA Length = 4738 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 3643 tcttcctcctcttcctcctcatc 3621
>gb|BC075886.1| Danio rerio zgc:92086, mRNA (cDNA clone MGC:92086 IMAGE:7047013), complete cds Length = 1515 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 1042 tcttcctcctcctcctcctcatcatca 1016
>gb|BC070795.1| Xenopus laevis hypothetical protein MGC83846, mRNA (cDNA clone MGC:83846 IMAGE:6643537), complete cds Length = 3065 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 265 caccatcttcctcctcttcctcctcatcatc 295 ||||||| |||||||| |||||||||||||| Sbjct: 2003 caccatcatcctcctcctcctcctcatcatc 1973
>gb|BC060922.1| Danio rerio zgc:73231, mRNA (cDNA clone MGC:73231 IMAGE:4145063), complete cds Length = 2834 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctca 290 ||||||||||||||||||||||| Sbjct: 1720 catcttcctcctcttcctcctca 1698
>gb|BC029704.1| Mus musculus mitogen-activated protein kinase 8 interacting protein 2, mRNA (cDNA clone MGC:35849 IMAGE:5359447), complete cds Length = 3332 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 403 ccatcttcctcctcttcctcctc 381 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 391 tcttcctcctcttcctcctc 372
>ref|XM_322180.1| Neurospora crassa OR74A hypothetical protein (NCU00095.1) partial mRNA Length = 3840 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 277 cctcttcctcctcatcatcacca 299 ||||||||||||||||||||||| Sbjct: 3631 cctcttcctcctcatcatcacca 3609
>ref|XM_329512.1| Neurospora crassa OR74A hypothetical protein ( (AL356324) related to actin-interacting protein AIP3 [Neurospora crassa OR74A] ) (NCU08468.1) partial mRNA Length = 3312 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 3152 ccatcttcctcctcttcctcctc 3130
>ref|XM_952126.1| Neurospora crassa OR74A hypothetical protein (NCU00095.1) partial mRNA Length = 3840 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 277 cctcttcctcctcatcatcacca 299 ||||||||||||||||||||||| Sbjct: 3631 cctcttcctcctcatcatcacca 3609
>ref|XM_957161.1| Neurospora crassa OR74A hypothetical protein (NCU06547.1) partial mRNA Length = 1875 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||||||||| |||||| Sbjct: 871 tcttcctcctcttcctcctcttcatca 897
>ref|XM_958217.1| Neurospora crassa OR74A hypothetical protein ( (AL356324) related to actin-interacting protein AIP3 [Neurospora crassa OR74A] ) (NCU08468.1) partial mRNA Length = 3312 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 3152 ccatcttcctcctcttcctcctc 3130
>ref|XM_326401.1| Neurospora crassa OR74A hypothetical protein (NCU06547.1) partial mRNA Length = 1875 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||||||||| |||||| Sbjct: 871 tcttcctcctcttcctcctcttcatca 897
>ref|NM_010880.3| Mus musculus nucleolin (Ncl), mRNA Length = 8257 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 1050 tcttcctcctcttcttcctcatcatca 1024
>ref|XM_714630.1| Candida albicans SC5314 putative RNA Pol II CTD phosphatase component (CaO19_14034), mRNA Length = 2307 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 2057 tcttcctcctcttcttcctcatcatca 2031
>ref|XM_714747.1| Candida albicans SC5314 putative RNA Pol II CTD phosphatase component (CaO19_6742), mRNA Length = 2307 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 2057 tcttcctcctcttcttcctcatcatca 2031
>gb|AC026891.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-56M2, complete sequence Length = 232327 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatcacca 299 |||||||| |||||||||||||||||| Sbjct: 225781 tcctcctcctcctcctcatcatcacca 225755
>gb|BC023880.1| Mus musculus zinc finger, CCHC domain containing 6, mRNA (cDNA clone MGC:38585 IMAGE:5354757), complete cds Length = 4215 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 1364 tcttcctcctcctcctcctcatcatca 1338
>gb|AC139579.3| Mus musculus BAC clone RP23-139E6 from chromosome 7, complete sequence Length = 194033 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 147527 tcttcctcctcctcctcctcatcatca 147553
>gb|BC025485.1| Mus musculus zinc finger, CCHC domain containing 6, mRNA (cDNA clone IMAGE:5151342), containing frame-shift errors Length = 2389 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 788 tcttcctcctcctcctcctcatcatca 762
>ref|NM_001004474.1| Homo sapiens olfactory receptor, family 10, subfamily S, member 1 (OR10S1), mRNA Length = 996 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 119 tcttcctcctcttcctcctcatc 141
>gb|AC162690.2| Mus musculus chromosome 5, clone RP24-170F2, complete sequence Length = 180370 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 145394 tcttcctcctcttcctcctcatc 145372 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 145308 tcttcctcctcttcctcctcatc 145286 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 145403 tcttcctcctcttcctcctc 145384
>gb|AC161245.2| Mus musculus BAC clone RP24-394N21 from chromosome 9, complete sequence Length = 177389 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||||||||||||| ||||| Sbjct: 149720 tcttcctcctcttcctcctcaccatca 149694
>gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, complete sequence Length = 186062 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatcacca 299 |||||||| |||||||||||||||||| Sbjct: 169114 tcctcctcctcctcctcatcatcacca 169088
>ref|XM_001006666.1| PREDICTED: Mus musculus hypothetical protein LOC668988 (LOC668988), mRNA Length = 300 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 278 ccatcttcctcctcttcctcctc 256 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 266 tcttcctcctcttcctcctc 247 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 257 tcttcctcctcttcctcctc 238 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 248 tcttcctcctcttcctcctc 229 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 239 tcttcctcctcttcctcctc 220 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 230 tcttcctcctcttcctcctc 211 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 221 tcttcctcctcttcctcctc 202 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 212 tcttcctcctcttcctcctc 193 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 203 tcttcctcctcttcctcctc 184 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 194 tcttcctcctcttcctcctc 175 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 185 tcttcctcctcttcctcctc 166 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 176 tcttcctcctcttcctcctc 157 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 167 tcttcctcctcttcctcctc 148 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 158 tcttcctcctcttcctcctc 139 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 149 tcttcctcctcttcctcctc 130 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 140 tcttcctcctcttcctcctc 121 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 131 tcttcctcctcttcctcctc 112
>gb|BC014285.1| Mus musculus nucleolin, mRNA (cDNA clone IMAGE:3667173), with apparent retained intron Length = 1231 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 893 tcttcctcctcttcttcctcatcatca 867
>gb|AY422088.1| Astatotilapia burtoni neuroD (nrd) mRNA, complete cds Length = 1744 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||||||||| |||||| Sbjct: 304 tcttcctcctcttcctcctcttcatca 278
>gb|AC135670.3| Mus musculus BAC clone RP23-370D21 from chromosome 19, complete sequence Length = 182582 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatcacca 299 ||||||||||||||||| ||||||||| Sbjct: 153986 tcctcctcttcctcctcctcatcacca 153960
>gb|AC129013.3| Mus musculus BAC clone RP24-550P17 from chromosome 6, complete sequence Length = 169094 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 146169 tcttcctcctcttcctcctcatc 146147
>ref|XM_707379.1| Candida albicans SC5314 hypothetical protein (MDM12) partial mRNA Length = 1287 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 1193 tcttcctcctcctcctcctcatcatca 1167
>ref|XM_821100.1| Trypanosoma brucei TREU927 clone RPCI93-30P12 transcription activator (Tb927.3.2140) partial mRNA Length = 2847 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||||||| |||||||| Sbjct: 266 tcttcctcctcttcctccccatcatca 240
>emb|CT030096.1| Xenopus tropicalis finished cDNA, clone TGas070h02 Length = 2041 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcat 294 |||||||||| |||||||||||||||| Sbjct: 369 catcttcctcttcttcctcctcatcat 343
>gb|BC079005.1| Rattus norvegicus eukaryotic translation initiation factor 3, subunit 7 (zeta), mRNA (cDNA clone MGC:93918 IMAGE:7113045), complete cds Length = 1870 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 1714 tcttcctcctcttcctcctcatc 1692
>gb|AC132148.3| Mus musculus BAC clone RP23-6N21 from chromosome 19, complete sequence Length = 191402 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatcacca 299 ||||||||||||||||| ||||||||| Sbjct: 3156 tcctcctcttcctcctcctcatcacca 3130 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 120956 tcttcctcctcttcctcctc 120937 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 92367 tcttcctcctcttcctcctc 92348
>gb|AC121767.3| Mus musculus BAC clone RP23-339E1 from chromosome 1, complete sequence Length = 184736 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 25242 tcttcctcctcctcctcctcatcatca 25268
>gb|AC125350.3| Mus musculus BAC clone RP23-423B11 from chromosome 13, complete sequence Length = 205567 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 161233 tcttcctcctcctcctcctcatcatca 161207
>gb|BC012657.1| Mus musculus nucleolin, mRNA (cDNA clone IMAGE:3983668), with apparent retained intron Length = 1231 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 893 tcttcctcctcttcttcctcatcatca 867
>gb|AC121798.3| Mus musculus BAC clone RP23-426H21 from chromosome 2, complete sequence Length = 209189 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||||||||| ||||||||| Sbjct: 154476 tcttcctcctcttcctcatcatcatca 154502
>gb|AC122873.5| Mus musculus BAC clone RP23-110K10 from 8, complete sequence Length = 199474 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 14351 tcttcctcctcttcctcctcatc 14373
>ref|XM_883650.1| Candida albicans SC5314 hypothetical protein (CaJ7.0134) partial mRNA Length = 1287 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 1193 tcttcctcctcctcctcctcatcatca 1167
>emb|CT010303.1| Mus musculus full open reading frame cDNA clone RZPDo836B0552D for gene 9030407H20Rik, RIKEN cDNA 9030407H20 gene; complete cds, incl. stopcodon Length = 678 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 163 tcttcctcctcttcctcctcatc 185
>ref|NM_021921.2| Mus musculus mitogen-activated protein kinase 8 interacting protein 2 (Mapk8ip2), mRNA Length = 3332 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 403 ccatcttcctcctcttcctcctc 381 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 391 tcttcctcctcttcctcctc 372
>gb|AC105407.5| Mus musculus BAC clone RP24-196J17 from 13, complete sequence Length = 175889 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 11065 tcttcctcctcctcctcctcatcatca 11091
>gb|AC159648.2| Mus musculus BAC clone RP23-38A15 from chromosome 12, complete sequence Length = 156190 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 46163 tcttcctcctcttcctcctcatc 46185
>ref|NM_001004283.1| Rattus norvegicus eukaryotic translation initiation factor 3, subunit 7 (zeta) (Eif3s7), mRNA Length = 1870 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 1714 tcttcctcctcttcctcctcatc 1692
>gb|AC109169.13| Mus musculus chromosome 6, clone RP23-5D6, complete sequence Length = 204911 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 123322 tcttcctcctcttcctcctcatc 123344
>gb|AC159304.2| Mus musculus BAC clone RP23-211E20 from chromosome 13, complete sequence Length = 195948 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 192104 tcttcctcctcttcctcctcatc 192126 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 192062 tcttcctcctcttcctcctc 192081 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 191927 tcttcctcctcttcctcctc 191946 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 191885 tcttcctcctcttcctcctc 191904
>gb|DQ446883.1| Arabidopsis thaliana clone pENTR221-At4g29980 unknown (At4g29980) mRNA, complete cds Length = 510 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatcatc 295 ||||||||||||||||||||||| Sbjct: 20 tcctcctcttcctcctcatcatc 42
>emb|AL606500.8| Human DNA sequence from clone RP11-274N19 on chromosome 1 Contains the 3' end of the KCNN3 gene for potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, a novel gene and the 5' end of the ADAR gene for adenosine deaminase, RNA-specific, complete sequence Length = 173014 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 169259 tcttcctcctcttcctcctcatc 169237 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||| ||||| Sbjct: 169510 tcttcctcctcttcctcctcctcatc 169485
>emb|AL512659.6| Human DNA sequence from clone RP11-319L6 on chromosome 13 Contains a novel pseudogene, complete sequence Length = 80417 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 499 ccatcttcctcctcttcctcctc 477
>ref|XM_504035.1| Yarrowia lipolytica CLIB122, YALI0E16731g predicted mRNA Length = 3645 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 1634 tcttcctcctcttcctcctcatc 1612 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 1643 tcttcctcctcttcctcctc 1624
>emb|AL358796.43| Human DNA sequence from clone RP13-260P4 on chromosome Xq13.1-13.3 Contains the 5' end of a novel gene similar to Chic1 (LOC349423) and one CpG island, complete sequence Length = 74427 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 8272 tcttcctcctcttcctcctcatc 8250
>emb|AL355799.12| Human DNA sequence from clone RP11-432D3 on chromosome 13 Contains a novel gene, complete sequence Length = 184561 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 183060 ccatcttcctcctcttcctcctc 183038
>ref|XM_779262.1| PREDICTED: Strongylocentrotus purpuratus similar to ankyrin repeat domain 26 (LOC579129), partial mRNA Length = 3393 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatcaccaagg 302 ||||||||||||| |||||||| |||||| ||||| Sbjct: 61 catcttcctcctcctcctcctcctcatcatcaagg 27
>ref|XM_784268.1| PREDICTED: Strongylocentrotus purpuratus similar to ankyrin repeat domain 26 (LOC584408), mRNA Length = 7137 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatcaccaagg 302 ||||||||||||| ||||| ||||||||| ||||| Sbjct: 1240 catcttcctcctcctcctcgtcatcatcatcaagg 1206
>gb|AC026761.17| Mus musculus Strain 129S6/SvEvTac chromosome 19 BAC, RP22-325J22, Complete Sequence, complete sequence Length = 163475 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatcatcacca 299 ||||||||||||||||| ||||||||| Sbjct: 64497 tcctcctcttcctcctcctcatcacca 64523
>ref|XM_792529.1| PREDICTED: Strongylocentrotus purpuratus similar to 3-hydroxybutyrate dehydrogenase (heart, mitochondrial) (LOC593031), mRNA Length = 904 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 708 tcttcctcctcttcctcctcatc 686
>ref|XM_777194.1| PREDICTED: Strongylocentrotus purpuratus similar to delangin isoform A (LOC576931), partial mRNA Length = 1887 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 275 ctcctcttcctcctcatcatcac 297 ||||||||||||||||||||||| Sbjct: 1632 ctcctcttcctcctcatcatcac 1610
>gb|AF255664.2| Ictalurus punctatus major vault protein mRNA, partial cds Length = 2613 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 1106 tcttcctcctcttcctcctcatc 1084
>emb|X16561.1|PFPOLII Plasmodium falciparum DNA for RNA polymerase II large subunit (EC 2.7.7.6) Length = 8631 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 5356 tcttcctcctcctcctcctcatcatca 5330
>emb|CR936642.1| Homo sapiens mRNA; cDNA DKFZp686F2342 (from clone DKFZp686F2342) Length = 6817 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 249 tcttcctcctcttcctcctcatc 227
>emb|CR392356.5| Mouse DNA sequence from clone RP23-329D21 on chromosome 11 Contains a novel gene, the 5' end of the Dock2 gene for dedicator of cyto-kinesis 2 and a CpG island, complete sequence Length = 90351 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 22489 tcttcctcctcctcctcctcatcatca 22515
>gb|AC159645.2| Mus musculus BAC clone RP23-242E11 from chromosome 12, complete sequence Length = 220771 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 152070 tcttcctcctcttcctcctcatc 152092
>gb|AC151284.3| Mus musculus BAC clone RP23-391C14 from chromosome 17, complete sequence Length = 202363 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 198849 tcttcctcctcttcctcctcatc 198827 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 199014 tcttcctcctcttcctcctc 198995
>emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 72 Length = 198924 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatc 295 ||||||||||||||||||||||| Sbjct: 5178 tcctcctcttcctcctcatcatc 5156
>emb|AL050352.1|ATF27B13 Arabidopsis thaliana DNA chromosome 4, BAC clone F27B13 (ESSA project) Length = 98401 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatc 295 ||||||||||||||||||||||| Sbjct: 90105 tcctcctcttcctcctcatcatc 90083
>emb|AL078464.1|ATF6G3 Arabidopsis thaliana DNA chromosome 4, BAC clone F6G3 (ESSA project) Length = 93953 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatc 295 ||||||||||||||||||||||| Sbjct: 2349 tcctcctcttcctcctcatcatc 2327
>gb|AC160756.7| Mus musculus chromosome 15, clone RP23-158H4, complete sequence Length = 194707 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 109209 ccatcttcctcctcttcctcctc 109231
>emb|AL645943.19| Mouse DNA sequence from clone RP23-130E22 on chromosome 11 Contains a prohibitin (Phb) pseudogene and a novel gene, complete sequence Length = 213383 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 70304 tcttcctcctcttcctcctcatc 70282 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 156635 tcttcctcctcttcctcctc 156616 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 156502 tcttcctcctcttcctcctc 156483 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 15628 tcttcctcctcttcctcctc 15609
>emb|AL607146.6| Mouse DNA sequence from clone RP23-312G6 on chromosome 11 Contains the 5' end of a novel gene, complete sequence Length = 191046 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 164845 tcttcctcctcctcctcctcatcatca 164871
>emb|AL844182.10| Mouse DNA sequence from clone RP23-399H17 on chromosome 4, complete sequence Length = 201590 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 134478 tcttcctcctcttcctcctcatc 134456
>gb|BC005460.1| Mus musculus nucleolin, mRNA (cDNA clone MGC:6363 IMAGE:3495665), complete cds Length = 3005 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 870 tcttcctcctcttcttcctcatcatca 844 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatc 292 ||||||| ||||||||||||||||| Sbjct: 806 catcttcatcctcttcctcctcatc 782
>ref|NM_200833.1| Danio rerio zgc:73231 (zgc:73231), mRNA Length = 2834 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctca 290 ||||||||||||||||||||||| Sbjct: 1720 catcttcctcctcttcctcctca 1698
>gb|AF220195.1| Mus musculus JIP2 mRNA, complete cds Length = 3256 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 343 ccatcttcctcctcttcctcctc 321 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 331 tcttcctcctcttcctcctc 312
>ref|NM_001039840.1| Homo sapiens cysteine-rich hydrophobic domain 1 (CHIC1), mRNA Length = 4158 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 238 tcttcctcctcttcctcctcatc 216
>gb|BT024872.1| Arabidopsis thaliana At4g29980 gene, complete cds Length = 510 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatcatc 295 ||||||||||||||||||||||| Sbjct: 20 tcctcctcttcctcctcatcatc 42
>dbj|AK146161.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730025D19 product:Warning: possibly chimeric clone, full insert sequence Length = 2464 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 701 ccatcttcctcctcttcctcctc 679
>dbj|AK144894.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730049H03 product:nucleolin, full insert sequence Length = 5362 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 960 tcttcctcctcttcttcctcatcatca 934
>dbj|AK158968.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530021A08 product:mitogen-activated protein kinase 8 interacting protein 2, full insert sequence Length = 3392 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 478 ccatcttcctcctcttcctcctc 456 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 466 tcttcctcctcttcctcctc 447
>dbj|AK166681.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0002A07 product:nucleolin, full insert sequence Length = 2401 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 960 tcttcctcctcttcttcctcatcatca 934
>gb|AC061963.13| Mus musculus chromosome 9, clone RP23-23P9, complete sequence Length = 201757 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||||||||| ||||||||| Sbjct: 98265 tcttcctcctcttcctcttcatcatca 98239 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 89854 tcttcctcctcttcctcctc 89835 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 89845 tcttcctcctcttcctcctc 89826
>dbj|AK163275.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020008K19 product:nucleolin, full insert sequence Length = 2521 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 961 tcttcctcctcttcttcctcatcatca 935
>dbj|AK168623.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:I920039B08 product:nucleolin, full insert sequence Length = 2390 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 960 tcttcctcctcttcttcctcatcatca 934
>dbj|AK161706.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730589I21 product:nucleolin, full insert sequence Length = 2929 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 970 tcttcctcctcttcttcctcatcatca 944
>ref|XM_686405.1| PREDICTED: Danio rerio similar to two AAA domain containing protein (LOC563039), partial mRNA Length = 3185 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 265 caccatcttcctcctcttcctcctcatcatc 295 ||||||| ||||||||||||||||| ||||| Sbjct: 791 caccatcctcctcctcttcctcctcctcatc 761
>dbj|AK165167.1| Mus musculus 8 cells embryo 8 cells cDNA, RIKEN full-length enriched library, clone:E860016D17 product:nucleolin, full insert sequence Length = 3073 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 960 tcttcctcctcttcttcctcatcatca 934
>dbj|AK168579.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920036J10 product:nucleolin, full insert sequence Length = 2390 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 960 tcttcctcctcttcttcctcatcatca 934
>ref|XM_697292.1| PREDICTED: Danio rerio hypothetical protein LOC554481 (LOC554481), mRNA Length = 1729 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctca 290 ||||||||||||||||||||||| Sbjct: 632 catcttcctcctcttcctcctca 610
>dbj|AK161597.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430406C13 product:nucleolin, full insert sequence Length = 2391 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 960 tcttcctcctcttcttcctcatcatca 934
>gb|AC027801.10| Homo sapiens chromosome 17, clone RP11-304F15, complete sequence Length = 164914 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 136339 ccatcttcctcctcttcctcctc 136317
>gb|S76466.1| type I serine-threonine kinase receptor [rats, pituitary tumor cells GH3, mRNA, 2275 nt] Length = 2275 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||||||||| ||||||||| Sbjct: 417 tcttcctcctcttcctcatcatcatca 443
>gb|AC130669.17| Mus musculus chromosome 15, clone RP24-84O5, complete sequence Length = 205231 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 1306 ccatcttcctcctcttcctcctc 1284
>gb|AC154297.3| Mus musculus BAC clone RP23-427N21 from chromosome 13, complete sequence Length = 172087 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 150343 tcttcctcctcctcctcctcatcatca 150369
>dbj|AK088402.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430014O05 product:nucleolin, full insert sequence Length = 2390 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 960 tcttcctcctcttcttcctcatcatca 934
>dbj|AK029128.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732495B18 product:nucleolin, full insert sequence Length = 3255 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 960 tcttcctcctcttcttcctcatcatca 934
>dbj|AK050958.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030044N17 product:nucleolin, full insert sequence Length = 2327 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 347 tcttcctcctcttcttcctcatcatca 321
>dbj|AK028681.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732433L19 product:nucleolin, full insert sequence Length = 2388 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 960 tcttcctcctcttcttcctcatcatca 934
>dbj|AK031606.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030459G24 product:nucleolin, full insert sequence Length = 3274 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 996 tcttcctcctcttcttcctcatcatca 970
>dbj|AK083307.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:C920001J17 product:nucleolin, full insert sequence Length = 2399 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 970 tcttcctcctcttcttcctcatcatca 944
>gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-activated potassium channel (KCNN3) gene, complete cds Length = 163217 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 115221 tcttcctcctcttcctcctcatc 115243 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 114855 tcttcctcctcttcctcctcatc 114877 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||| ||||| Sbjct: 114604 tcttcctcctcttcctcctcctcatc 114629
>dbj|AK042094.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630057J21 product:unclassifiable, full insert sequence Length = 2514 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 1322 tcttcctcctcctcctcctcatcatca 1348
>dbj|AK031043.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5832429G12 product:zinc finger, CCHC domain containing 6, full insert sequence Length = 3809 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 2230 tcttcctcctcctcctcctcatcatca 2204
>tpg|BK004509.1| TPA: TPA_exp: Homo sapiens olfactory receptor OR11-279 gene, complete cds Length = 996 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 119 tcttcctcctcttcctcctcatc 141
>dbj|AK014339.1| Mus musculus 14, 17 days embryo head cDNA, RIKEN full-length enriched library, clone:3230402N03 product:mitogen-activated protein kinase 8 interacting protein 2, full insert sequence Length = 3701 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 328 ccatcttcctcctcttcctcctc 306 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 316 tcttcctcctcttcctcctc 297
>dbj|AK011201.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2600013M03 product:nucleolin, full insert sequence Length = 1475 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 960 tcttcctcctcttcttcctcatcatca 934
>gb|AF318184.1|AF318184 Mus musculus nucleolin mRNA, complete cds Length = 2412 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||| |||||||||||| Sbjct: 962 tcttcctcctcttcttcctcatcatca 936
>gb|AC159150.5| Mus musculus BAC RP23-339M5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205775 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 60884 tcttcctcctcttcctcctcatc 60906 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aatccaaaacttagaccttt 103 |||||||||||||||||||| Sbjct: 125466 aatccaaaacttagaccttt 125447
>gb|AC101891.8| Mus musculus chromosome 3, clone RP23-468J10, complete sequence Length = 174044 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatcatcacca 299 |||||||| |||||||||||||||||| Sbjct: 154819 tcctcctcctcctcctcatcatcacca 154845
>gb|AF310135.1|AF310135 Mus musculus JNK-interacting protein-2 (Jip2) mRNA, complete cds Length = 2862 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 405 ccatcttcctcctcttcctcctc 383 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 393 tcttcctcctcttcctcctc 374
>ref|NM_144805.1| Mus musculus transmembrane protein 40 (Tmem40), mRNA Length = 1249 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 195 tcttcctcctcttcctcctcatc 217
>gb|AY088159.1| Arabidopsis thaliana clone 42211 mRNA, complete sequence Length = 630 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatcatc 295 ||||||||||||||||||||||| Sbjct: 57 tcctcctcttcctcctcatcatc 79
>ref|XM_575506.1| PREDICTED: Rattus norvegicus similar to High mobility group protein 1 (HMG-1) (Amphoterin) (Heparin-binding protein p30) (LOC500154), mRNA Length = 1725 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 730 tcttcctcctcttcctcctcatc 708
>gb|AF533650.1| Phaseolus coccineus LEC1-like protein mRNA, complete cds Length = 988 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 748 tcttcctcctcctcctcctcatcatca 722
>gb|AY701521.1| Salmo salar CD8 alpha truncated splice variant mRNA, complete cds, alternatively spliced Length = 694 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 274 cctcctcttcctcctcatcatca 296 ||||||||||||||||||||||| Sbjct: 570 cctcctcttcctcctcatcatca 592
>gb|AY693393.1| Salmo salar CD8 alpha mRNA, complete cds Length = 1033 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 274 cctcctcttcctcctcatcatca 296 ||||||||||||||||||||||| Sbjct: 570 cctcctcttcctcctcatcatca 592
>gb|AY693391.1| Salmo salar CD8 alpha gene, complete cds Length = 2601 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 274 cctcctcttcctcctcatcatca 296 ||||||||||||||||||||||| Sbjct: 1325 cctcctcttcctcctcatcatca 1347
>ref|NM_001002370.1| Danio rerio zgc:92086 (zgc:92086), mRNA Length = 1515 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 1042 tcttcctcctcctcctcctcatcatca 1016
>emb|AL671981.12| Mouse DNA sequence from clone RP23-358P8 on chromosome X, complete sequence Length = 167604 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 13795 tcttcctcctcttcctcctcatc 13773
>emb|AL669967.12| Mouse DNA sequence from clone RP23-216M21 on chromosome X, complete sequence Length = 219583 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 25882 ccatcttcctcctcttcctcctc 25860 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25870 tcttcctcctcttcctcctc 25851 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25861 tcttcctcctcttcctcctc 25842 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25852 tcttcctcctcttcctcctc 25833 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25843 tcttcctcctcttcctcctc 25824 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25834 tcttcctcctcttcctcctc 25815 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25825 tcttcctcctcttcctcctc 25806 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25816 tcttcctcctcttcctcctc 25797 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25807 tcttcctcctcttcctcctc 25788 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25798 tcttcctcctcttcctcctc 25779 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25789 tcttcctcctcttcctcctc 25770 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25780 tcttcctcctcttcctcctc 25761 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25771 tcttcctcctcttcctcctc 25752 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25762 tcttcctcctcttcctcctc 25743 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25753 tcttcctcctcttcctcctc 25734 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25744 tcttcctcctcttcctcctc 25725 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 25735 tcttcctcctcttcctcctc 25716
>gb|BC043111.1| Mus musculus zinc finger, CCHC domain containing 6, mRNA (cDNA clone MGC:58033 IMAGE:6407010), complete cds Length = 5523 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 2607 tcttcctcctcctcctcctcatcatca 2581
>gb|AF083424.1|AF083424 Ateline herpesvirus 3 complete genome Length = 108409 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 63087 tcttcctcctcttcctcctcatc 63109 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 63051 tcttcctcctcttcctcctcatc 63073 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 62880 tcttcctcctcttcctcctcatc 62902 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 cttcctcctcttcctcctcatc 292 |||||||||||||||||||||| Sbjct: 62728 cttcctcctcttcctcctcatc 62749 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 63078 tcttcctcctcttcctcctc 63097 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatc 292 |||||||||||||||||||| Sbjct: 63018 tcctcctcttcctcctcatc 63037 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatc 292 |||||||||||||||||||| Sbjct: 62928 tcctcctcttcctcctcatc 62947 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatc 292 |||||||||||||||||||| Sbjct: 62910 tcctcctcttcctcctcatc 62929 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 62871 tcttcctcctcttcctcctc 62890 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 62862 tcttcctcctcttcctcctc 62881
>gb|AC119196.12| Mus musculus chromosome 7, clone RP24-179I13, complete sequence Length = 165611 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 80231 tcttcctcctcttcctcctcatc 80253
>gb|AF072686.1|AF072686 Oreochromis aureus vitellogenin gene, complete cds Length = 11453 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||||||||| |||||| Sbjct: 7358 tcttcctcctcttcctcctcttcatca 7384
>emb|CR388073.11| Zebrafish DNA sequence from clone CH211-197K16 in linkage group 25, complete sequence Length = 131786 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctca 290 ||||||||||||||||||||||| Sbjct: 114637 catcttcctcctcttcctcctca 114615
>gb|BC019416.1| Mus musculus transmembrane protein 40, mRNA (cDNA clone MGC:30375 IMAGE:5151159), complete cds Length = 1249 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 195 tcttcctcctcttcctcctcatc 217
>emb|CT009721.14| Mouse DNA sequence from clone RP23-130L13 on chromosome 9, complete sequence Length = 50450 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 33900 tcttcctcctcttcctcctcatc 33922
>gb|AF017250.1|AF017250 Oreochromis aureus vitellogenin precursor (Vtg1) mRNA, complete cds Length = 5511 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 |||||||||||||||||||| |||||| Sbjct: 3449 tcttcctcctcttcctcctcttcatca 3475
>dbj|AP001884.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-148F13, complete sequence Length = 160492 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 29319 tcttcctcctcttcctcctcatc 29297
>dbj|AP002407.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-767M8, complete sequence Length = 176292 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 95097 tcttcctcctcttcctcctcatc 95075
>gb|AF083554.1|AF083554 Heterodera glycines dorsal esophageal gland-specific protein (drs-1) mRNA, partial cds Length = 1268 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 274 cctcctcttcctcctcatcatca 296 ||||||||||||||||||||||| Sbjct: 352 cctcctcttcctcctcatcatca 330
>gb|U92813.1|HMU92813 Hirudo medicinalis tractin mRNA, complete cds Length = 6164 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 3531 ccatcttcctcctcttcctcctc 3509
>emb|AL807828.14| Mouse DNA sequence from clone RP23-184N11 on chromosome 4, complete sequence Length = 174593 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 88941 tcttcctcctcttcctcctcatc 88919 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 ttcctcctcttcctcctcatc 292 ||||||||||||||||||||| Sbjct: 88963 ttcctcctcttcctcctcatc 88943 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 43343 tcttcctcctcttcctcctc 43324 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 43334 tcttcctcctcttcctcctc 43315
>gb|AC127258.4| Mus musculus BAC clone RP24-302G16 from 8, complete sequence Length = 163028 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 78138 tcttcctcctcttcctcctcatc 78116
>gb|AC137513.3| Mus musculus BAC clone RP24-460O22 from 15, complete sequence Length = 179386 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 267 ccatcttcctcctcttcctcctc 289 ||||||||||||||||||||||| Sbjct: 69251 ccatcttcctcctcttcctcctc 69273 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 69263 tcttcctcctcttcctcctc 69282 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 39939 tcttcctcctcttcctcctc 39920 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 39930 tcttcctcctcttcctcctc 39911
>ref|NM_153538.2| Mus musculus zinc finger, CCHC domain containing 6 (Zcchc6), mRNA Length = 5523 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 2607 tcttcctcctcctcctcctcatcatca 2581
>emb|CT025607.9| Mouse DNA sequence from clone RP23-451F18 on chromosome 9, complete sequence Length = 187876 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||||||||||||| ||||| Sbjct: 96748 tcttcctcctcttcctcctcaccatca 96722
>gb|AC173481.1| Mus musculus BAC clone RP23-411A24 from chromosome 13, complete sequence Length = 203948 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 134009 tcttcctcctcttcctcctcatc 133987 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 134228 tcttcctcctcttcctcctc 134209 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 134186 tcttcctcctcttcctcctc 134167 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 134051 tcttcctcctcttcctcctc 134032
>gb|AC114581.8| Mus musculus chromosome 8, clone RP23-170M20, complete sequence Length = 197312 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 102973 tcttcctcctcttcctcctcatc 102951
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 1980965 tcttcctcctcttcctcctcatc 1980943 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 cttcctcctcttcctcctcatcatc 295 ||||||||||||||||||| ||||| Sbjct: 306379 cttcctcctcttcctcctcctcatc 306355 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatca 293 ||||||||||||||||| |||||| Sbjct: 3779078 tcttcctcctcttcctcgtcatca 3779055 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 1980974 tcttcctcctcttcctcctc 1980955
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 249445 tcttcctcctcctcctcctcatcatca 249419 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 268 catcttcctcctcttcctcctc 289 |||||||||||||||||||||| Sbjct: 271157 catcttcctcctcttcctcctc 271178 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatcatca 296 ||||||||||||||||| |||||| Sbjct: 855869 tcctcctcttcctcctcctcatca 855846
>emb|AL928804.5| Mouse DNA sequence from clone RP23-87G8 on chromosome 2, complete sequence Length = 127800 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||||||||| ||||||||| Sbjct: 53962 tcttcctcctcttcctcatcatcatca 53988
>emb|AL645471.8| Mouse DNA sequence from clone RP23-456M3 on chromosome 11, complete sequence Length = 178361 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 114103 tcttcctcctcttcctcctcatc 114125
>gb|AC163648.2| Mus musculus BAC clone RP23-220E20 from chromosome 17, complete sequence Length = 169556 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 150995 tcttcctcctcttcctcctcatc 151017 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 150947 tcttcctcctcttcctcctc 150966 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 150774 tcttcctcctcttcctcctc 150793 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 107638 tcttcctcctcttcctcctc 107619 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 107629 tcttcctcctcttcctcctc 107610 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 107620 tcttcctcctcttcctcctc 107601 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 107611 tcttcctcctcttcctcctc 107592 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 107602 tcttcctcctcttcctcctc 107583 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 107593 tcttcctcctcttcctcctc 107574 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 107584 tcttcctcctcttcctcctc 107565
>emb|AL606498.17| Mouse DNA sequence from clone RP23-197C15 on chromosome 11, complete sequence Length = 222330 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||| ||||||||||||||| Sbjct: 28078 tcttcctcctcctcctcctcatcatca 28052 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 164511 tcttcctcctcttcctcctc 164530 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 164484 tcttcctcctcttcctcctc 164503
>gb|AC166048.3| Mus musculus BAC clone RP24-266C15 from chromosome 9, complete sequence Length = 144816 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatca 296 ||||||||||||||||| ||||||||| Sbjct: 117455 tcttcctcctcttcctcttcatcatca 117481 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 125875 tcttcctcctcttcctcctc 125894 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 125866 tcttcctcctcttcctcctc 125885
>dbj|AB065758.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_321 Length = 1369 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatc 292 ||||||||||||||||||||||| Sbjct: 292 tcttcctcctcttcctcctcatc 314
>gb|AC116758.11| Mus musculus chromosome 8, clone RP23-383A10, complete sequence Length = 190294 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 268 catcttcctcctcttcctcctc 289 |||||||||||||||||||||| Sbjct: 157327 catcttcctcctcttcctcctc 157348
>ref|NM_179583.2| Arabidopsis thaliana structural constituent of ribosome AT1G80620 mRNA, complete cds Length = 1519 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatcatcacc 298 |||||||| ||||||||||||||||| Sbjct: 113 tcctcctcctcctcctcatcatcacc 138
>gb|AC102311.10| Mus musculus chromosome 1, clone RP24-426M1, complete sequence Length = 175758 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctc 289 |||||||||||||||||||||| Sbjct: 36604 catcttcctcctcttcctcctc 36583
>gb|AC114554.8| Mus musculus chromosome 5, clone RP23-414E14, complete sequence Length = 204467 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 268 catcttcctcctcttcctcctc 289 |||||||||||||||||||||| Sbjct: 198062 catcttcctcctcttcctcctc 198083 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 tcctcctcttcctcctcatc 292 |||||||||||||||||||| Sbjct: 78467 tcctcctcttcctcctcatc 78448
>gb|AY398360.1| Danio rerio clone RK140A4H11 heterogeneous nuclear ribonucleoprotein (HNRPC) mRNA, complete cds Length = 1636 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 cctcctcttcctcctcatcatc 295 |||||||||||||||||||||| Sbjct: 947 cctcctcttcctcctcatcatc 926
>ref|XM_637436.1| Dictyostelium discoideum hypothetical protein (DDB0203430), partial mRNA Length = 6561 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 268 catcttcctcctcttcctcctcatcatcac 297 |||| |||||||| |||||||||||||||| Sbjct: 1409 catcatcctcctcctcctcctcatcatcac 1438
>ref|XM_511295.1| PREDICTED: Pan troglodytes similar to KIAA0909 protein (LOC454458), mRNA Length = 5262 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 267 ccatcttcctcctcttcctcctcatcatca 296 |||||||| |||||||| |||||||||||| Sbjct: 1639 ccatcttcttcctcttcttcctcatcatca 1668
>ref|XM_509874.1| PREDICTED: Pan troglodytes similar to adenylate cyclase 4; adenylate cyclase type IV (LOC452819), mRNA Length = 4203 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 cttcctcctcttcctcctcatc 292 |||||||||||||||||||||| Sbjct: 2694 cttcctcctcttcctcctcatc 2715
>gb|AC166828.3| Mus musculus BAC clone RP23-332O23 from chromosome 14, complete sequence Length = 216845 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatcacca 299 |||||||||||||||| ||||| ||||||| Sbjct: 134076 tcttcctcctcttccttctcattatcacca 134047
>ref|XM_527856.1| PREDICTED: Pan troglodytes hypothetical protein FLJ20485 (LOC472481), mRNA Length = 2691 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 267 ccatcttcctcctcttcctcctcatc 292 ||||||||||||||||| |||||||| Sbjct: 977 ccatcttcctcctcttcttcctcatc 952
>gb|AC022775.16| Mus musculus chromosome 15, clone RP23-71O17, complete sequence Length = 223532 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||| ||||| Sbjct: 129058 tcttcctcctcttcctcctcctcatc 129083 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 129088 tcttcctcctcttcctcctc 129107
>gb|AC130281.13| Mus musculus chromosome 3, clone RP23-372I17, complete sequence Length = 216261 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 268 catcttcctcctcttcctcctc 289 |||||||||||||||||||||| Sbjct: 121335 catcttcctcctcttcctcctc 121356 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 121274 tcttcctcctcttcctcctc 121293
>gb|BC083352.1| Mus musculus high mobility group box 3, mRNA (cDNA clone MGC:102149 IMAGE:30540227), complete cds Length = 1490 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctc 289 |||||||||||||||||||||| Sbjct: 609 catcttcctcctcttcctcctc 588
>gb|AY617191.1| Sterkiella histriomuscorum clone UGC1O0001_C14_F genomic sequence Length = 760 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatc 295 |||||||||||||| ||||||||||| Sbjct: 579 tcttcctcctcttcttcctcatcatc 554
>gb|AC112970.18| Mus musculus chromosome 17, clone RP24-443D19, complete sequence Length = 172747 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 273 tcctcctcttcctcctcatcatcacc 298 ||||||||||||||||| |||||||| Sbjct: 61339 tcctcctcttcctcctcctcatcacc 61364 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctc 289 |||||||||||||||||||| Sbjct: 86332 tcttcctcctcttcctcctc 86313
>gb|AC113587.16| Mus musculus chromosome 15, clone RP24-424I13, complete sequence Length = 191054 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 274 cctcctcttcctcctcatcatc 295 |||||||||||||||||||||| Sbjct: 57919 cctcctcttcctcctcatcatc 57940
>gb|AF005370.1| Alcelaphine herpesvirus 1 L-DNA, complete sequence Length = 130608 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatc 295 |||||||||||||| ||||||||||| Sbjct: 117634 tcttcctcctcttcttcctcatcatc 117659 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||| ||||||||||| ||||||||||| Sbjct: 117737 catcatcctcctcttcttcctcatcatc 117764 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||| ||||||||||| ||||||||||| Sbjct: 117716 catcatcctcctcttcttcctcatcatc 117743 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||| ||||||||||| ||||||||||| Sbjct: 117695 catcatcctcctcttcttcctcatcatc 117722 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||| ||||||||||| ||||||||||| Sbjct: 117674 catcatcctcctcttcttcctcatcatc 117701 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||| ||||||||||| ||||||||||| Sbjct: 117653 catcatcctcctcttcttcctcatcatc 117680
>gb|AC163688.5| Mus musculus BAC clone CH25-316N15 from chromosome 12, complete sequence Length = 106789 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cttcctcctcttcctcctcatcatca 296 |||||||||| ||||||||||||||| Sbjct: 8288 cttcctcctcctcctcctcatcatca 8313
>gb|AC154194.2| Mus musculus BAC clone RP24-401L2 from chromosome 17, complete sequence Length = 196871 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 270 tcttcctcctcttcctcctcatcatc 295 ||||||||||| |||||||||||||| Sbjct: 136361 tcttcctcctcctcctcctcatcatc 136386
>gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, complete sequence Length = 239688 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 cttcctcctcttcctcctcatc 292 |||||||||||||||||||||| Sbjct: 190904 cttcctcctcttcctcctcatc 190883
>ref|XM_618000.2| PREDICTED: Bos taurus similar to POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1) (LOC537815), mRNA Length = 1179 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 cttcctcctcttcctcctcatc 292 |||||||||||||||||||||| Sbjct: 443 cttcctcctcttcctcctcatc 464
>ref|XM_869267.1| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family F, member 1 isoform b (LOC617082), mRNA Length = 1138 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 272 ttcctcctcttcctcctcatcatcac 297 ||||||||||||||||||||| |||| Sbjct: 490 ttcctcctcttcctcctcatcttcac 465
>ref|XM_603695.2| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family F, member 1 isoform b (LOC525343), mRNA Length = 1705 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 272 ttcctcctcttcctcctcatcatcac 297 ||||||||||||||||||||| |||| Sbjct: 180 ttcctcctcttcctcctcatcttcac 155
>ref|XM_418109.1| PREDICTED: Gallus gallus similar to KIAA0924 protein (LOC419987), mRNA Length = 1529 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctc 289 |||||||||||||||||||||| Sbjct: 573 catcttcctcctcttcctcctc 552
>gb|AC091454.2| Mus musculus chromosome X, clones RP21-438P10, RP21-382F2, RP21-118B24, Map qA7.1, complete sequences Length = 393632 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctc 289 |||||||||||||||||||||| Sbjct: 182576 catcttcctcctcttcctcctc 182555
>gb|AC116798.11| Mus musculus chromosome 1, clone RP24-329K22, complete sequence Length = 173479 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cttcctcctcttcctcctcatcatca 296 |||||||||| ||||||||||||||| Sbjct: 98056 cttcctcctcctcctcctcatcatca 98031
>gb|AC139107.3| Mus musculus BAC clone RP23-430L2 from chromosome 8, complete sequence Length = 192627 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||| ||||| Sbjct: 84487 tcttcctcctcttcctcctcctcatc 84462
>ref|XM_594024.2| PREDICTED: Bos taurus similar to carbonic anhydrase VIII (LOC515918), mRNA Length = 2229 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 cttcctcctcttcctcctcatc 292 |||||||||||||||||||||| Sbjct: 715 cttcctcctcttcctcctcatc 694
>ref|NM_198418.1| Mus musculus tudor domain containing 6 (Tdrd6), mRNA Length = 7057 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctc 289 |||||||||||||||||||||| Sbjct: 1519 catcttcctcctcttcctcctc 1498
>gb|BC046891.1| Danio rerio zgc:55733, mRNA (cDNA clone MGC:55733 IMAGE:3816250), complete cds Length = 2553 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 cctcctcttcctcctcatcatc 295 |||||||||||||||||||||| Sbjct: 946 cctcctcttcctcctcatcatc 925
>ref|XM_329527.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein B9J10.310 [imported] - Neurospora crassa OR74A ) (NCU08483.1) partial mRNA Length = 372 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 602 taaagccttgtccatatcatcatcat 627 ||||||||||||||| |||||||||| Sbjct: 204 taaagccttgtccatttcatcatcat 179
>ref|XM_585549.2| PREDICTED: Bos taurus similar to nucleolin-related protein (LOC616944), mRNA Length = 2256 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 270 tcttcctcctcttcctcctcatcatc 295 |||||||||||||||||||| ||||| Sbjct: 623 tcttcctcctcttcctcctcctcatc 598 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 268 catcttcctcctcttcctcctcatcatc 295 |||| |||||||| |||||||||||||| Sbjct: 460 catcctcctcctcctcctcctcatcatc 433 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,628,825 Number of Sequences: 3902068 Number of extensions: 7628825 Number of successful extensions: 282003 Number of sequences better than 10.0: 4380 Number of HSP's better than 10.0 without gapping: 4400 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 249346 Number of HSP's gapped (non-prelim): 32528 length of query: 648 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 625 effective length of database: 17,143,297,704 effective search space: 10714561065000 effective search space used: 10714561065000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)