>EMS_DROME (P18488) Homeotic protein empty spiracles|
          Length = 497

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +2

Query: 455 PFYSVAPPAHQPPMPWRHPRLS*LSHLALRPSHPRWFSWLSQL--SHLVLQPWHP 613
           P + +APPAH  P P  H +     HL     HP        +   HL++Q  HP
Sbjct: 80  PHHLMAPPAHGLPYPHPHAQQQQQQHLQAPHPHPHLSPAQQHVLHQHLLMQHQHP 134

>DLTB_BACSU (P39580) Protein dltB|
          Length = 395

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +3

Query: 456 LSIQLHHLPISRLCHGVILGCHSFLIWRFDLRILGGFLGCRSFLISCFN------RGILH 617
           +SI +  L  S   HGVI  C  F IW+  + ++ G+L  R    S F         IL 
Sbjct: 37  ISIIILALIFSHDLHGVIALC-LFTIWQ--VLLISGYLAYRQKANSGFVFCGAVIASILP 93

Query: 618 WFLGLVWPSYLVLQPWHP 671
            FL  +WP     QP HP
Sbjct: 94  LFLSKIWPFLSHPQPHHP 111

>RHAAB_BACSK (Q5WL39) RhaA/rhaB bifunctional enzyme [Includes: Rhamnulokinase|
           (EC 2.7.1.5) (Rhamnulose kinase); L-rhamnose isomerase
           (EC 5.3.1.14)]
          Length = 894

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 21/53 (39%), Positives = 24/53 (45%)
 Frame = -2

Query: 327 RRAVRLAKAVTYIWPHSRELHQSSRGIGVAIKRS*CGTSVGAAFHRVN*HPES 169
           R  VR A  VTY  P   E H SSR     ++    G  V AAF +V   P S
Sbjct: 451 RALVRTAFPVTYFLPQRSESHVSSRFESAKVQYEQLGIDVEAAFAKVKQVPIS 503

>CD248_HUMAN (Q9HCU0) Endosialin precursor (Tumor endothelial marker 1) (CD248|
           antigen)
          Length = 757

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +2

Query: 461 YSVAPPAHQPPM-PWRHPRLS*LSHLALRPSHPRWFSWLSQLSHLV-LQPWHPPLVSWLG 634
           +S  PPAHQPPM   ++P L       + P      +     +HL  + P H PLV+ LG
Sbjct: 505 HSAQPPAHQPPMISTKYPELFPAHQSPMFPD--TRVAGTQTTTHLPGIPPNHAPLVTTLG 562

Query: 635 VAFLPGA 655
               P A
Sbjct: 563 AQLPPQA 569


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,280,239
Number of Sequences: 219361
Number of extensions: 2005137
Number of successful extensions: 4955
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4951
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6912958834
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)