ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags31g17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK069777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 337 2e-89
2ref|XM_473766.1| Oryza sativa (japonica cultivar-group), predic... 335 1e-88
3gb|AY106925.1| Zea mays PCO125905 mRNA sequence 323 4e-85
4emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4,... 206 6e-50
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 206 6e-50
6emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4,... 206 6e-50
7gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 44 0.52
8emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete ch... 42 2.1
9gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 2.1
10emb|BX276177.6| Zebrafish DNA sequence from clone CH211-223M11 i... 42 2.1
11gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 2.1
12gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 8.1
13ref|XM_866959.1| PREDICTED: Bos taurus similar to aldehyde dehyd... 40 8.1
14gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 8.1
15ref|XM_742216.1| Aspergillus fumigatus Af293 hypothetical protei... 40 8.1
16ref|XM_390010.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 8.1
17emb|Z66565.1|CET04F8 Caenorhabditis elegans Cosmid T04F8, comple... 40 8.1
18emb|CR726439.2|CNS0GNGT Tetraodon nigroviridis full-length cDNA 40 8.1
19emb|CR693357.2|CNS0FXY1 Tetraodon nigroviridis full-length cDNA 40 8.1
20emb|CR685910.2|CNS0FS76 Tetraodon nigroviridis full-length cDNA 40 8.1
21emb|CR673307.2|CNS0FIHT Tetraodon nigroviridis full-length cDNA 40 8.1
22gb|AC147964.10| Medicago truncatula clone mth2-5i18, complete se... 40 8.1
23emb|BX901885.7| Human DNA sequence from clone WI2-81939E3 on chr... 40 8.1
24gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 8.1
25emb|AL137078.20| Human DNA sequence from clone RP1-66N13 on chro... 40 8.1
26emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 40 8.1
27emb|BX296563.3| Human DNA sequence from clone RP11-18M14 on chro... 40 8.1
28gb|AC122707.2| Homo sapiens chromosome 5 clone RP11-158J3, compl... 40 8.1
29gb|AC091885.2| Homo sapiens chromosome 5 clone RP11-116O11, comp... 40 8.1
30gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 8.1
31gb|AC150261.6| Aedes aegypti, clone XX-54F19, complete sequence 40 8.1
32gb|AC007743.3| Homo sapiens BAC clone RP11-481J13 from 2, comple... 40 8.1
33gb|AE004837.1| Pseudomonas aeruginosa PAO1, section 398 of 529 o... 40 8.1
34dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 8.1
35gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 8.1
36gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 8.1

>dbj|AK069777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026G02, full
           insert sequence
          Length = 795

 Score =  337 bits (170), Expect = 2e-89
 Identities = 329/382 (86%)
 Strand = Plus / Minus

                                                                       
Query: 215 tctactcgacgccctcggcggatctctggatgagcacggcggccagggtgatggcggagg 274
           |||||||||||||||||| |||| |||||   |  ||| || | ||||||||| ||||||
Sbjct: 605 tctactcgacgccctcggtggatttctgggccatgacgacgccgagggtgatgacggagg 546

                                                                       
Query: 275 cgtagatggcattgggcaccttgtgcactaccttgccgacgccggggacgccctcggttg 334
           |||||||||  |||||||||||| |||| ||| ||||||||||||| |||||||| || |
Sbjct: 545 cgtagatggagttgggcaccttgcgcaccaccctgccgacgccgggcacgccctccgtcg 486

                                                                       
Query: 335 cccttttggtcgccagcgccagcgcaggggcggcgaccagcgtgatgatcagcttgaggc 394
           |||| |||||||||||||||||||| || || || |||||||| |  | |||||||| ||
Sbjct: 485 ccctcttggtcgccagcgccagcgccggcgccgccaccagcgtcaccagcagcttgaagc 426

                                                                       
Query: 395 tgatcgcacagagtgactcggcggtcagcttccggatgaactccgcaaactcctcacggt 454
           ||||||| || || ||||| || ||||||||||||||||||||||| |||||||| ||||
Sbjct: 425 tgatcgcgcacagcgactccgccgtcagcttccggatgaactccgcgaactcctcccggt 366

                                                                       
Query: 455 ccaggagaccgttcatgtcaatgtcaaactcattcatgagagccttgagcctctccttgg 514
           ||||||| |||| || ||  |||||  |||||||||| |  ||||||||| |||||||||
Sbjct: 365 ccaggagcccgtccaggttgatgtcgtactcattcatcatggccttgagcttctccttgg 306

                                                                       
Query: 515 acggggggtcgtagtgcggccccggcaagtacttgttgatgtcgttgtagacgcagagga 574
           | || || || ||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 305 agggcggatcatagtgcggccctggtaagtacttgttgatgtcgttgtagacgcagagga 246

                                 
Query: 575 cggcgatgtagacctcctcgaa 596
           ||||||||||||||||||||||
Sbjct: 245 cggcgatgtagacctcctcgaa 224



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>ref|XM_473766.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 519

 Score =  335 bits (169), Expect = 1e-88
 Identities = 328/381 (86%)
 Strand = Plus / Minus

                                                                       
Query: 216 ctactcgacgccctcggcggatctctggatgagcacggcggccagggtgatggcggaggc 275
           ||||||||||||||||| |||| |||||   |  ||| || | ||||||||| |||||||
Sbjct: 519 ctactcgacgccctcggtggatttctgggccatgacgacgccgagggtgatgacggaggc 460

                                                                       
Query: 276 gtagatggcattgggcaccttgtgcactaccttgccgacgccggggacgccctcggttgc 335
           ||||||||  |||||||||||| |||| ||| ||||||||||||| |||||||| || ||
Sbjct: 459 gtagatggagttgggcaccttgcgcaccaccctgccgacgccgggcacgccctccgtcgc 400

                                                                       
Query: 336 ccttttggtcgccagcgccagcgcaggggcggcgaccagcgtgatgatcagcttgaggct 395
           ||| |||||||||||||||||||| || || || |||||||| |  | |||||||| |||
Sbjct: 399 cctcttggtcgccagcgccagcgccggcgccgccaccagcgtcaccagcagcttgaagct 340

                                                                       
Query: 396 gatcgcacagagtgactcggcggtcagcttccggatgaactccgcaaactcctcacggtc 455
           |||||| || || ||||| || ||||||||||||||||||||||| |||||||| |||||
Sbjct: 339 gatcgcgcacagcgactccgccgtcagcttccggatgaactccgcgaactcctcccggtc 280

                                                                       
Query: 456 caggagaccgttcatgtcaatgtcaaactcattcatgagagccttgagcctctccttgga 515
           |||||| |||| || ||  |||||  |||||||||| |  ||||||||| ||||||||||
Sbjct: 279 caggagcccgtccaggttgatgtcgtactcattcatcatggccttgagcttctccttgga 220

                                                                       
Query: 516 cggggggtcgtagtgcggccccggcaagtacttgttgatgtcgttgtagacgcagaggac 575
            || || || ||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 219 gggcggatcatagtgcggccctggtaagtacttgttgatgtcgttgtagacgcagaggac 160

                                
Query: 576 ggcgatgtagacctcctcgaa 596
           |||||||||||||||||||||
Sbjct: 159 ggcgatgtagacctcctcgaa 139



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>gb|AY106925.1| Zea mays PCO125905 mRNA sequence
          Length = 787

 Score =  323 bits (163), Expect = 4e-85
 Identities = 325/379 (85%)
 Strand = Plus / Minus

                                                                       
Query: 218 actcgacgccctcggcggatctctggatgagcacggcggccagggtgatggcggaggcgt 277
           |||||||||||||||  |||||||| |  |||||  || |||||||||||||||||||||
Sbjct: 536 actcgacgccctcggttgatctctgcaacagcacaacgcccagggtgatggcggaggcgt 477

                                                                       
Query: 278 agatggcattgggcaccttgtgcactaccttgccgacgccggggacgccctcggttgccc 337
           |||  || |||||||||||| | || |||||||| ||||||||||||||||| || ||||
Sbjct: 476 agagcgcgttgggcaccttgcgtaccaccttgcccacgccggggacgccctccgtcgccc 417

                                                                       
Query: 338 ttttggtcgccagcgccagcgcaggggcggcgaccagcgtgatgatcagcttgaggctga 397
             |||||||||| ||||||||| || || || ||||||||||| | |||||| | |||||
Sbjct: 416 gcttggtcgccatcgccagcgccggcgccgccaccagcgtgatcagcagcttcacgctga 357

                                                                       
Query: 398 tcgcacagagtgactcggcggtcagcttccggatgaactccgcaaactcctcacggtcca 457
           |||  || || || || |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 356 tcgagcacagcgagtccgcggtcagcttccggatgaactccgcgaactcctcgcggtcca 297

                                                                       
Query: 458 ggagaccgttcatgtcaatgtcaaactcattcatgagagccttgagcctctccttggacg 517
           |||| |||| || ||  | |||  |||| | ||| |  ||| ||||| ||||||||||||
Sbjct: 296 ggagcccgtccaggttcacgtcgtactcctccatcatggccctgagcttctccttggacg 237

                                                                       
Query: 518 gggggtcgtagtgcggccccggcaagtacttgttgatgtcgttgtagacgcagaggacgg 577
           ||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 236 gggggtcgtggtgcggccccggcaagtacttattgatgtcattgtagacgcagaggacgg 177

                              
Query: 578 cgatgtagacctcctcgaa 596
           |||||||||||||||||||
Sbjct: 176 cgatgtagacctcctcgaa 158



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>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02,
             complete sequence
          Length = 166804

 Score =  206 bits (104), Expect = 6e-50
 Identities = 215/252 (85%)
 Strand = Plus / Plus

                                                                         
Query: 215   tctactcgacgccctcggcggatctctggatgagcacggcggccagggtgatggcggagg 274
             |||||||||||||||||| |||| |||||   |  ||| || | ||||||||| ||||||
Sbjct: 29589 tctactcgacgccctcggtggatttctgggccatgacgacgccgagggtgatgacggagg 29648

                                                                         
Query: 275   cgtagatggcattgggcaccttgtgcactaccttgccgacgccggggacgccctcggttg 334
             |||||||||  |||||||||||| |||| ||| ||||||||||||| |||||||| || |
Sbjct: 29649 cgtagatggagttgggcaccttgcgcaccaccctgccgacgccgggcacgccctccgtcg 29708

                                                                         
Query: 335   cccttttggtcgccagcgccagcgcaggggcggcgaccagcgtgatgatcagcttgaggc 394
             |||| |||||||||||||||||||| || || || |||||||| |  | |||||||| ||
Sbjct: 29709 ccctcttggtcgccagcgccagcgccggcgccgccaccagcgtcaccagcagcttgaagc 29768

                                                                         
Query: 395   tgatcgcacagagtgactcggcggtcagcttccggatgaactccgcaaactcctcacggt 454
             ||||||| || || ||||| || ||||||||||||||||||||||| |||||||| ||||
Sbjct: 29769 tgatcgcgcacagcgactccgccgtcagcttccggatgaactccgcgaactcctcccggt 29828

                         
Query: 455   ccaggagaccgt 466
             ||||||| ||||
Sbjct: 29829 ccaggagcccgt 29840



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                   
Query: 559   ttgtagacgcagaggacggcgatgtagacctcctcgaa 596
             ||||||||||||||||||||||||||||||||||||||
Sbjct: 30657 ttgtagacgcagaggacggcgatgtagacctcctcgaa 30694



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                         
Query: 496   gccttgagcctctccttggacggggggtcgtagtgcggccccggcaagtacttgttgatg 555
             ||||||||| |||||||||| || || || ||||||||||| || |||||||||||||||
Sbjct: 30502 gccttgagcttctccttggagggcggatcatagtgcggccctggtaagtacttgttgatg 30561

                
Query: 556   tcg 558
             |||
Sbjct: 30562 tcg 30564



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  206 bits (104), Expect = 6e-50
 Identities = 215/252 (85%)
 Strand = Plus / Plus

                                                                            
Query: 215      tctactcgacgccctcggcggatctctggatgagcacggcggccagggtgatggcggagg 274
                |||||||||||||||||| |||| |||||   |  ||| || | ||||||||| ||||||
Sbjct: 30396211 tctactcgacgccctcggtggatttctgggccatgacgacgccgagggtgatgacggagg 30396270

                                                                            
Query: 275      cgtagatggcattgggcaccttgtgcactaccttgccgacgccggggacgccctcggttg 334
                |||||||||  |||||||||||| |||| ||| ||||||||||||| |||||||| || |
Sbjct: 30396271 cgtagatggagttgggcaccttgcgcaccaccctgccgacgccgggcacgccctccgtcg 30396330

                                                                            
Query: 335      cccttttggtcgccagcgccagcgcaggggcggcgaccagcgtgatgatcagcttgaggc 394
                |||| |||||||||||||||||||| || || || |||||||| |  | |||||||| ||
Sbjct: 30396331 ccctcttggtcgccagcgccagcgccggcgccgccaccagcgtcaccagcagcttgaagc 30396390

                                                                            
Query: 395      tgatcgcacagagtgactcggcggtcagcttccggatgaactccgcaaactcctcacggt 454
                ||||||| || || ||||| || ||||||||||||||||||||||| |||||||| ||||
Sbjct: 30396391 tgatcgcgcacagcgactccgccgtcagcttccggatgaactccgcgaactcctcccggt 30396450

                            
Query: 455      ccaggagaccgt 466
                ||||||| ||||
Sbjct: 30396451 ccaggagcccgt 30396462



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                      
Query: 559      ttgtagacgcagaggacggcgatgtagacctcctcgaa 596
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 30397279 ttgtagacgcagaggacggcgatgtagacctcctcgaa 30397316



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                            
Query: 496      gccttgagcctctccttggacggggggtcgtagtgcggccccggcaagtacttgttgatg 555
                ||||||||| |||||||||| || || || ||||||||||| || |||||||||||||||
Sbjct: 30397124 gccttgagcttctccttggagggcggatcatagtgcggccctggtaagtacttgttgatg 30397183

                   
Query: 556      tcg 558
                |||
Sbjct: 30397184 tcg 30397186



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>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12,
              complete sequence
          Length = 160989

 Score =  206 bits (104), Expect = 6e-50
 Identities = 215/252 (85%)
 Strand = Plus / Plus

                                                                          
Query: 215    tctactcgacgccctcggcggatctctggatgagcacggcggccagggtgatggcggagg 274
              |||||||||||||||||| |||| |||||   |  ||| || | ||||||||| ||||||
Sbjct: 146107 tctactcgacgccctcggtggatttctgggccatgacgacgccgagggtgatgacggagg 146166

                                                                          
Query: 275    cgtagatggcattgggcaccttgtgcactaccttgccgacgccggggacgccctcggttg 334
              |||||||||  |||||||||||| |||| ||| ||||||||||||| |||||||| || |
Sbjct: 146167 cgtagatggagttgggcaccttgcgcaccaccctgccgacgccgggcacgccctccgtcg 146226

                                                                          
Query: 335    cccttttggtcgccagcgccagcgcaggggcggcgaccagcgtgatgatcagcttgaggc 394
              |||| |||||||||||||||||||| || || || |||||||| |  | |||||||| ||
Sbjct: 146227 ccctcttggtcgccagcgccagcgccggcgccgccaccagcgtcaccagcagcttgaagc 146286

                                                                          
Query: 395    tgatcgcacagagtgactcggcggtcagcttccggatgaactccgcaaactcctcacggt 454
              ||||||| || || ||||| || ||||||||||||||||||||||| |||||||| ||||
Sbjct: 146287 tgatcgcgcacagcgactccgccgtcagcttccggatgaactccgcgaactcctcccggt 146346

                          
Query: 455    ccaggagaccgt 466
              ||||||| ||||
Sbjct: 146347 ccaggagcccgt 146358



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                    
Query: 559    ttgtagacgcagaggacggcgatgtagacctcctcgaa 596
              ||||||||||||||||||||||||||||||||||||||
Sbjct: 147175 ttgtagacgcagaggacggcgatgtagacctcctcgaa 147212



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                          
Query: 496    gccttgagcctctccttggacggggggtcgtagtgcggccccggcaagtacttgttgatg 555
              ||||||||| |||||||||| || || || ||||||||||| || |||||||||||||||
Sbjct: 147020 gccttgagcttctccttggagggcggatcatagtgcggccctggtaagtacttgttgatg 147079

                 
Query: 556    tcg 558
              |||
Sbjct: 147080 tcg 147082



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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 251     cggcggccagggtgatggcggaggcg 276
               |||||||||||||||||| |||||||
Sbjct: 1053285 cggcggccagggtgatggtggaggcg 1053260



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>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12
          Length = 323450

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 350   gcgccagcgcaggggcggcga 370
             |||||||||||||||||||||
Sbjct: 66927 gcgccagcgcaggggcggcga 66907



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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
               complete sequence
          Length = 1476513

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 375     cgtgatgatcagcttgaggct 395
               |||||||||||||||||||||
Sbjct: 1457287 cgtgatgatcagcttgaggct 1457307



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>emb|BX276177.6| Zebrafish DNA sequence from clone CH211-223M11 in linkage group 20,
             complete sequence
          Length = 202340

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 143   cacatcacatttacaacccca 163
             |||||||||||||||||||||
Sbjct: 10289 cacatcacatttacaacccca 10309



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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 306     cttgccgacgccggggacgcc 326
               |||||||||||||||||||||
Sbjct: 2217136 cttgccgacgccggggacgcc 2217116



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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 491     tgagagccttgagcctctccttgg 514
               |||| |||||||||||||||||||
Sbjct: 3976020 tgagggccttgagcctctccttgg 3975997



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>ref|XM_866959.1| PREDICTED: Bos taurus similar to aldehyde dehydrogenase 3A2 isoform
            1, transcript variant 2 (LOC513967), mRNA
          Length = 3087

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 238  ctctggatgagcacggcggccagg 261
            |||| |||||||||||||||||||
Sbjct: 1445 ctcttgatgagcacggcggccagg 1422



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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 340     ttggtcgccagcgccagcgc 359
               ||||||||||||||||||||
Sbjct: 2803321 ttggtcgccagcgccagcgc 2803340



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>ref|XM_742216.1| Aspergillus fumigatus Af293 hypothetical protein (Afu8g05040)
           partial mRNA
          Length = 951

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 302 ctaccttgccgacgccgggg 321
           ||||||||||||||||||||
Sbjct: 123 ctaccttgccgacgccgggg 142



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>ref|XM_390010.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09834.1)
            partial mRNA
          Length = 1713

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 547  ttgttgatgtcgttgtagac 566
            ||||||||||||||||||||
Sbjct: 1490 ttgttgatgtcgttgtagac 1471



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>emb|Z66565.1|CET04F8 Caenorhabditis elegans Cosmid T04F8, complete sequence
          Length = 37872

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 541   aagtacttgttgatgtcgtt 560
             ||||||||||||||||||||
Sbjct: 12706 aagtacttgttgatgtcgtt 12687



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>emb|CR726439.2|CNS0GNGT Tetraodon nigroviridis full-length cDNA
          Length = 965

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 484 tcattcatgagagccttgag 503
           ||||||||||||||||||||
Sbjct: 826 tcattcatgagagccttgag 845



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>emb|CR693357.2|CNS0FXY1 Tetraodon nigroviridis full-length cDNA
          Length = 980

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 484 tcattcatgagagccttgag 503
           ||||||||||||||||||||
Sbjct: 842 tcattcatgagagccttgag 861



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>emb|CR685910.2|CNS0FS76 Tetraodon nigroviridis full-length cDNA
          Length = 1008

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 484 tcattcatgagagccttgag 503
           ||||||||||||||||||||
Sbjct: 870 tcattcatgagagccttgag 889



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>emb|CR673307.2|CNS0FIHT Tetraodon nigroviridis full-length cDNA
          Length = 974

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 484 tcattcatgagagccttgag 503
           ||||||||||||||||||||
Sbjct: 852 tcattcatgagagccttgag 871



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>gb|AC147964.10| Medicago truncatula clone mth2-5i18, complete sequence
          Length = 134939

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    tgtcaaactcattcatgaga 495
              ||||||||||||||||||||
Sbjct: 118021 tgtcaaactcattcatgaga 118040



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>emb|BX901885.7| Human DNA sequence from clone WI2-81939E3 on chromosome X Contains the
             5' end of the IL3RA gene for interleukin 3 receptor alpha
             (low affinity), complete sequence
          Length = 34516

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   acatcacatttacaacccca 163
             ||||||||||||||||||||
Sbjct: 22471 acatcacatttacaacccca 22490



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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 216     ctactcgacgccctcggcgg 235
               ||||||||||||||||||||
Sbjct: 1759407 ctactcgacgccctcggcgg 1759426



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>emb|AL137078.20| Human DNA sequence from clone RP1-66N13 on chromosome 20 Contains a
             novel gene (LOC284749) and two novel genes, complete
             sequence
          Length = 80725

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   agtcccacagggcatcacct 128
             ||||||||||||||||||||
Sbjct: 51452 agtcccacagggcatcacct 51471



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>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   ggcggcgaccagcgtgatga 382
             ||||||||||||||||||||
Sbjct: 71206 ggcggcgaccagcgtgatga 71187



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>emb|BX296563.3| Human DNA sequence from clone RP11-18M14 on chromosome X Contains the
            5' end of the IL3RA gene for interleukin 3 receptor,
            alpha (low affinity) (IL3R, CD123, IL3RX, IL3RY, IL3RAY,
            hIL-3Ra, MGC34174), complete sequence
          Length = 21008

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  acatcacatttacaacccca 163
            ||||||||||||||||||||
Sbjct: 8815 acatcacatttacaacccca 8834



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  acatcacatttacaacccca 163
            ||||||||||||||||||||
Sbjct: 5963 acatcacatttacaacccca 5982



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>gb|AC122707.2| Homo sapiens chromosome 5 clone RP11-158J3, complete sequence
          Length = 180483

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   caaatcacatcacatttaca 157
             ||||||||||||||||||||
Sbjct: 46948 caaatcacatcacatttaca 46929



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>gb|AC091885.2| Homo sapiens chromosome 5 clone RP11-116O11, complete sequence
          Length = 167297

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     tacagaaaaaatacaagtcc 113
              ||||||||||||||||||||
Sbjct: 155776 tacagaaaaaatacaagtcc 155757



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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 247     agcacggcggccagggtgatggcg 270
               |||||| |||||||||||||||||
Sbjct: 4082658 agcacgccggccagggtgatggcg 4082635



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    gcacggcggccagggtgatg 267
              ||||||||||||||||||||
Sbjct: 753981 gcacggcggccagggtgatg 754000



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>gb|AC150261.6| Aedes aegypti, clone XX-54F19, complete sequence
          Length = 90619

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   caatgtcaaactcattcatg 492
             ||||||||||||||||||||
Sbjct: 49847 caatgtcaaactcattcatg 49828



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>gb|AC007743.3| Homo sapiens BAC clone RP11-481J13 from 2, complete sequence
          Length = 141836

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 480    aaactcattcatgagagcct 499
              ||||||||||||||||||||
Sbjct: 139250 aaactcattcatgagagcct 139231



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>gb|AE004837.1| Pseudomonas aeruginosa PAO1, section 398 of 529 of the complete
            genome
          Length = 10357

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 249  cacggcggccagggtgatgg 268
            ||||||||||||||||||||
Sbjct: 5746 cacggcggccagggtgatgg 5727



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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    cggccagggtgatggcggag 273
              ||||||||||||||||||||
Sbjct: 986987 cggccagggtgatggcggag 987006



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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 306     cttgccgacgccggggacgccctc 329
               ||||||||||||||||||| ||||
Sbjct: 2183323 cttgccgacgccggggacgtcctc 2183300



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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 210     cttcttctactcgacgccctcggc 233
               |||||| |||||||||||||||||
Sbjct: 1122324 cttcttgtactcgacgccctcggc 1122301


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,182,524
Number of Sequences: 3902068
Number of extensions: 4182524
Number of successful extensions: 83807
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82931
Number of HSP's gapped (non-prelim): 875
length of query: 596
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 573
effective length of database: 17,143,297,704
effective search space: 9823109584392
effective search space used: 9823109584392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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