Clone Information

BLAST Search Result

Clone Name	rbags31g16
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)	275	6e-74
2	RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)	252	5e-67
3	RS3A_HELAN (P49198) 40S ribosomal protein S3a	252	7e-67
4	RS3A_ARATH (Q42262) 40S ribosomal protein S3a	245	6e-65
5	RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific ...	235	7e-62
6	RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a	196	4e-50
7	RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a	192	8e-49
8	RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a	191	1e-48
9	RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformat...	191	2e-48
10	RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a	190	3e-48
11	RS3A_XENTR (Q642T2) 40S ribosomal protein S3a	190	3e-48
12	RS3A_XENLA (Q801S3) 40S ribosomal protein S3a	189	5e-48
13	RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)	189	5e-48
14	RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a	189	7e-48
15	RS3A_HUMAN (P61247) 40S ribosomal protein S3a	189	7e-48
16	RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a	189	7e-48
17	RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)	189	7e-48
18	RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformatio...	188	9e-48
19	RS3A_MOUSE (P97351) 40S ribosomal protein S3a	188	9e-48
20	RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)	188	9e-48
21	RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a	187	2e-47
22	RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich prote...	184	1e-46
23	RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)	182	7e-46
24	RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)	182	7e-46
25	RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)	169	4e-42
26	RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)	169	6e-42
27	RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)	162	5e-40
28	RS3A_CAEEL (P48154) 40S ribosomal protein S3a	161	1e-39
29	RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)	159	8e-39
30	RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae	69	1e-11
31	RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae	68	2e-11
32	RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae	66	7e-11
33	RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae	64	3e-10
34	RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae	64	3e-10
35	RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae	63	6e-10
36	RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae	63	8e-10
37	RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae	62	1e-09
38	RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae	62	1e-09
39	RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae	60	5e-09
40	RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae	60	5e-09
41	RS3A_METTH (O27630) 30S ribosomal protein S3Ae	57	3e-08
42	RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae	56	7e-08
43	RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae	55	2e-07
44	RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae	52	1e-06
45	RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae	51	3e-06
46	RS3A_METJA (P54059) 30S ribosomal protein S3Ae	50	4e-06
47	RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae	48	3e-05
48	RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae	42	0.002
49	RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae	37	0.045
50	RPOB_STRAW (Q82DQ5) DNA-directed RNA polymerase beta chain (EC 2...	30	7.2
51	PGK_MYCMS (P62415) Phosphoglycerate kinase (EC 2.7.2.3)	30	7.2
52	RPOB_STRCO (Q9L0L0) DNA-directed RNA polymerase beta chain (EC 2...	30	7.2
53	XPO6A_XENLA (Q53I77) Exportin-6-A	29	9.5
54	COOS_RHORU (P31896) Carbon monoxide dehydrogenase (EC 1.2.99.2) ...	29	9.5
55	COBQ_VIBPA (Q87HN1) Cobyric acid synthase	29	9.5

>RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 261

 Score =  275 bits (704), Expect = 6e-74
 Identities = 141/159 (88%), Positives = 149/159 (93%), Gaps = 1/159 (0%)
 Frame = -2

Query: 610 FTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQI 431
           FTTDKLRSLV+KWQTLIEAHVDVKTTD YMLR+F IGFTKRRPNQVKRTCYAQASQIRQI
Sbjct: 104 FTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQI 163

Query: 430 RRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFD 251
           RRKMVEIM NQA+SCDLKELV+KFIPEVIGKEIEKATSSIFPLQNV+VRKVKILKAPKFD
Sbjct: 164 RRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFD 223

Query: 250 LGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGAEEVAAAE 137
           LGKLMEVHGDY KED+G KLDRP  DE + G +EVAAAE
Sbjct: 224 LGKLMEVHGDYAKEDIGTKLDRPAEDEAMAG-QEVAAAE 261

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>RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 259

 Score =  252 bits (644), Expect = 5e-67
 Identities = 125/156 (80%), Positives = 137/156 (87%)
 Frame = -2

Query: 610 FTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQI 431
           FTTDKLRSLVRKWQ+LIEAHVDVKTTD+Y LRMF IGFTK+R NQ KRTCYAQ+SQIRQI
Sbjct: 104 FTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQI 163

Query: 430 RRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFD 251
           RRKM EIMVNQA SCDLK+LV KFIPE IG+EIEKATSSI+PLQNV++RKVKILKAPKFD
Sbjct: 164 RRKMREIMVNQAQSCDLKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 223

Query: 250 LGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVAA 143
           LGKLMEVHGDY ED+G KLDRP  + V    E + A
Sbjct: 224 LGKLMEVHGDYNEDIGTKLDRPAEEAVAEPTEVIGA 259

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>RS3A_HELAN (P49198) 40S ribosomal protein S3a|
          Length = 259

 Score =  252 bits (643), Expect = 7e-67
 Identities = 126/156 (80%), Positives = 139/156 (89%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           TTDKLRSLV+KWQ+LIEAHVDVKTTDN+ LRMF IGFTK+R NQVKRTCYAQ+SQI+QIR
Sbjct: 105 TTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMFCIGFTKKRANQVKRTCYAQSSQIKQIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           RKM EIMV QA +CDLKELV KFIPE IG+EIEKATSSI+PLQNV++RKVKILKAPKFD+
Sbjct: 165 RKMREIMVTQAQTCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDI 224

Query: 247 GKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVAAA 140
           GKLMEVHGDY EDVGVKLDRP  +E  P A EV  A
Sbjct: 225 GKLMEVHGDYSEDVGVKLDRP-AEEAAPEATEVIGA 259

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>RS3A_ARATH (Q42262) 40S ribosomal protein S3a|
          Length = 261

 Score =  245 bits (626), Expect = 6e-65
 Identities = 123/158 (77%), Positives = 136/158 (86%), Gaps = 1/158 (0%)
 Frame = -2

Query: 610 FTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQI 431
           FTTDKLRSLV+KWQTLIEAHVDVKTTD Y LRMF I FTKRR NQVKRTCYAQ+SQIRQI
Sbjct: 104 FTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQI 163

Query: 430 RRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFD 251
           RRKM EIMV +A+SCDLKELV KFIPE IG+EIEKAT  I+PLQNV++RKVKILKAPKFD
Sbjct: 164 RRKMSEIMVKEASSCDLKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFD 223

Query: 250 LGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGAEEVAAA 140
           LGKLMEVHGDY  EDVGVK+DRP  + ++    E+  A
Sbjct: 224 LGKLMEVHGDYTAEDVGVKVDRPADETMVEEPTEIIGA 261

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>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein|
           BIS289)
          Length = 261

 Score =  235 bits (600), Expect = 7e-62
 Identities = 122/159 (76%), Positives = 136/159 (85%), Gaps = 2/159 (1%)
 Frame = -2

Query: 610 FTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQI 431
           FTTDKLRSLV+KWQTLIE+HVDVKTTDNY LR+F I FTKRR NQVKRTCYAQ+SQIRQI
Sbjct: 104 FTTDKLRSLVKKWQTLIESHVDVKTTDNYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQI 163

Query: 430 RRKMVEIMV-NQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKF 254
           R KM EIM+  +A+SCDLKELV KFIPE IGK+IEKAT  I+PLQNV++RKVKILKAPKF
Sbjct: 164 RSKMREIMIKEEASSCDLKELVAKFIPESIGKDIEKATQGIYPLQNVFIRKVKILKAPKF 223

Query: 253 DLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGAEEVAAA 140
           DL KLMEVHGDY  EDVGVK+DRP  DEV+    E+  A
Sbjct: 224 DLRKLMEVHGDYTAEDVGVKVDRP-ADEVVEEPTEIIGA 261

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>RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a|
          Length = 247

 Score =  196 bits (498), Expect = 4e-50
 Identities = 101/140 (72%), Positives = 118/140 (84%), Gaps = 1/140 (0%)
 Frame = -2

Query: 610 FTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQI 431
           FTTDKLRSLVRKWQ+LI+AHVDVKTTDNY +R+F I FTK+RPN   R  YAQ+SQI  I
Sbjct: 103 FTTDKLRSLVRKWQSLIQAHVDVKTTDNYQIRIFCIAFTKKRPNHT-RNFYAQSSQI-AI 160

Query: 430 RRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEK-ATSSIFPLQNVYVRKVKILKAPKF 254
           RRKM EIMV +A +CDLKELV KFIPEVIGKEI++  +  I+PLQ+ ++RKVKILKAPKF
Sbjct: 161 RRKMREIMVKEAQTCDLKELVAKFIPEVIGKEIDEWRSQGIYPLQSTFIRKVKILKAPKF 220

Query: 253 DLGKLMEVHGDYKEDVGVKL 194
           DL KLMEVHGDY E+VG K+
Sbjct: 221 DLMKLMEVHGDYNEEVGAKI 240

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>RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a|
          Length = 265

 Score =  192 bits (487), Expect = 8e-49
 Identities = 93/154 (60%), Positives = 120/154 (77%), Gaps = 9/154 (5%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTKRR NQ+++T YAQ  Q+RQIR
Sbjct: 105 TRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKRRNNQIRKTSYAQHQQVRQIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  SI+PL +VYVRKVK+LK PKF+L
Sbjct: 165 KKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFEL 224

Query: 247 GKLMEVHGD---------YKEDVGVKLDRPDGDE 173
           GKLME+HG+           +D G K++R DG E
Sbjct: 225 GKLMELHGEGGAGTAAKATGDDTGAKVERADGYE 258

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>RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a|
          Length = 263

 Score =  191 bits (485), Expect = 1e-48
 Identities = 91/152 (59%), Positives = 120/152 (78%), Gaps = 7/152 (4%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DK+ S+V+KWQT+IEAH+DVKTTD Y+LR+F +GFTK+R NQ+++T YAQ  Q+RQIR
Sbjct: 105 TRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCVGFTKKRTNQIRKTSYAQHQQVRQIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KMVEIM  +  + DLKE+VNK IP+ IGK+IEKA  SI+PL +VYVRKVK+LK PKF+L
Sbjct: 165 KKMVEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFEL 224

Query: 247 GKLMEVHGD-------YKEDVGVKLDRPDGDE 173
           GKLME+HG+         ++ G K++R DG E
Sbjct: 225 GKLMELHGEGGGSGKPSGDETGAKVERADGYE 256

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>RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformation effector|
           protein)
          Length = 265

 Score =  191 bits (484), Expect = 2e-48
 Identities = 92/154 (59%), Positives = 120/154 (77%), Gaps = 9/154 (5%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQV++T YAQ  Q+RQIR
Sbjct: 105 TRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQVRKTSYAQHQQVRQIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KM+EIM  +  + DLKE+VNK IP+ +GK+IEKA  SI+PL +VYVRKVK+LK PKF+L
Sbjct: 165 KKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFEL 224

Query: 247 GKLMEVHGD---------YKEDVGVKLDRPDGDE 173
           GKLME+HG+           +D G K++R DG E
Sbjct: 225 GKLMELHGEGGAGGAAKASGDDTGAKVERADGYE 258

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>RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a|
          Length = 266

 Score =  190 bits (482), Expect = 3e-48
 Identities = 91/155 (58%), Positives = 120/155 (77%), Gaps = 10/155 (6%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YAQ  Q+RQIR
Sbjct: 105 TRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRTNQIRKTSYAQHQQVRQIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KM+EIM  +  + DLKE+VNK IP+ +GK+IEKA  SI+PL +VYVRKVK+LK PKF+L
Sbjct: 165 KKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFEL 224

Query: 247 GKLMEVHGD----------YKEDVGVKLDRPDGDE 173
           GKLME+HG+           + D G K++R DG E
Sbjct: 225 GKLMELHGEGGSTSAAAKPAEGDTGAKVERADGYE 259

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>RS3A_XENTR (Q642T2) 40S ribosomal protein S3a|
          Length = 263

 Score =  190 bits (482), Expect = 3e-48
 Identities = 91/152 (59%), Positives = 120/152 (78%), Gaps = 7/152 (4%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YAQ  Q+RQIR
Sbjct: 105 TRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  SI+PL +VYVRKVK+LK PKF+L
Sbjct: 165 KKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFEL 224

Query: 247 GKLMEVHGD-------YKEDVGVKLDRPDGDE 173
           GKLME+HG+         ++ G K++R DG E
Sbjct: 225 GKLMELHGEGGGAGKPAGDETGAKVERADGYE 256

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>RS3A_XENLA (Q801S3) 40S ribosomal protein S3a|
          Length = 263

 Score =  189 bits (480), Expect = 5e-48
 Identities = 91/152 (59%), Positives = 119/152 (78%), Gaps = 7/152 (4%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YAQ  Q+RQIR
Sbjct: 105 TRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KM EIM  +  + DLKE+VNK IP+ IGK+IEKA  SI+PL +VYVRKVK+LK PKF+L
Sbjct: 165 KKMFEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFEL 224

Query: 247 GKLMEVHGD-------YKEDVGVKLDRPDGDE 173
           GKLME+HG+         ++ G K++R DG E
Sbjct: 225 GKLMELHGEGGGTGKPAGDETGAKVERADGYE 256

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>RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)|
          Length = 263

 Score =  189 bits (480), Expect = 5e-48
 Identities = 91/152 (59%), Positives = 120/152 (78%), Gaps = 7/152 (4%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YAQ  Q+RQIR
Sbjct: 105 TRDKMFSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  SI+PL +VYVRKVK+LK PKF+L
Sbjct: 165 KKMMEIMTGEFQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFEL 224

Query: 247 GKLMEVHGD-------YKEDVGVKLDRPDGDE 173
           GKLME+HG+         ++ G K++R DG E
Sbjct: 225 GKLMELHGEGGGAGKPSGDEAGAKVERADGYE 256

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>RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a|
          Length = 263

 Score =  189 bits (479), Expect = 7e-48
 Identities = 90/152 (59%), Positives = 120/152 (78%), Gaps = 7/152 (4%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YAQ  Q+RQIR
Sbjct: 105 TRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  SI+PL +V+VRKVK+LK PKF+L
Sbjct: 165 KKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFEL 224

Query: 247 GKLMEVHGDYK-------EDVGVKLDRPDGDE 173
           GKLME+HG+         ++ G K++R DG E
Sbjct: 225 GKLMELHGEGSSSGKATGDETGAKVERADGYE 256

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>RS3A_HUMAN (P61247) 40S ribosomal protein S3a|
          Length = 263

 Score =  189 bits (479), Expect = 7e-48
 Identities = 90/152 (59%), Positives = 120/152 (78%), Gaps = 7/152 (4%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YAQ  Q+RQIR
Sbjct: 105 TRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  SI+PL +V+VRKVK+LK PKF+L
Sbjct: 165 KKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFEL 224

Query: 247 GKLMEVHGDYK-------EDVGVKLDRPDGDE 173
           GKLME+HG+         ++ G K++R DG E
Sbjct: 225 GKLMELHGEGSSSGKATGDETGAKVERADGYE 256

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>RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a|
          Length = 263

 Score =  189 bits (479), Expect = 7e-48
 Identities = 90/152 (59%), Positives = 120/152 (78%), Gaps = 7/152 (4%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YAQ  Q+RQIR
Sbjct: 105 TRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  SI+PL +V+VRKVK+LK PKF+L
Sbjct: 165 KKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFEL 224

Query: 247 GKLMEVHGDYK-------EDVGVKLDRPDGDE 173
           GKLME+HG+         ++ G K++R DG E
Sbjct: 225 GKLMELHGEGSSSGKATGDETGAKVERADGYE 256

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>RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)|
          Length = 260

 Score =  189 bits (479), Expect = 7e-48
 Identities = 90/152 (59%), Positives = 120/152 (78%), Gaps = 7/152 (4%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YAQ  Q+RQIR
Sbjct: 102 TRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIR 161

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  SI+PL +V+VRKVK+LK PKF+L
Sbjct: 162 KKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFEL 221

Query: 247 GKLMEVHGDYK-------EDVGVKLDRPDGDE 173
           GKLME+HG+         ++ G K++R DG E
Sbjct: 222 GKLMELHGEGSSSGKATGDETGAKVERADGYE 253

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>RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformation effector|
           protein) [Contains: 40S ribosomal protein S3b]
          Length = 263

 Score =  188 bits (478), Expect = 9e-48
 Identities = 90/152 (59%), Positives = 120/152 (78%), Gaps = 7/152 (4%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YAQ  Q+RQIR
Sbjct: 105 TRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  SI+PL +V+VRKVK+LK PKF+L
Sbjct: 165 KKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFEL 224

Query: 247 GKLMEVHGD-------YKEDVGVKLDRPDGDE 173
           GKLME+HG+         ++ G K++R DG E
Sbjct: 225 GKLMELHGEGGSSGKTTGDETGAKVERADGYE 256

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>RS3A_MOUSE (P97351) 40S ribosomal protein S3a|
          Length = 263

 Score =  188 bits (478), Expect = 9e-48
 Identities = 90/152 (59%), Positives = 120/152 (78%), Gaps = 7/152 (4%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YAQ  Q+RQIR
Sbjct: 105 TRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA  SI+PL +V+VRKVK+LK PKF+L
Sbjct: 165 KKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFEL 224

Query: 247 GKLMEVHGD-------YKEDVGVKLDRPDGDE 173
           GKLME+HG+         ++ G K++R DG E
Sbjct: 225 GKLMELHGEGGSSGKAAGDETGAKVERADGYE 256

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>RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)|
          Length = 251

 Score =  188 bits (478), Expect = 9e-48
 Identities = 93/138 (67%), Positives = 114/138 (82%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T+DKLRSLVRKWQT IEA   +KTTD Y+ R+F IGFT+RR NQVK+T YAQ+SQIR IR
Sbjct: 105 TSDKLRSLVRKWQTTIEADQTIKTTDGYLCRVFVIGFTRRRANQVKKTTYAQSSQIRAIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KM +++ NQ +SC ++ELV K IPEVIG+EIE+AT SIFPLQNV VRKVKILKAPK D 
Sbjct: 165 QKMFQVIQNQTSSCSMRELVQKLIPEVIGREIERATGSIFPLQNVLVRKVKILKAPKHDA 224

Query: 247 GKLMEVHGDYKEDVGVKL 194
            KL+E+HG+  +DVG K+
Sbjct: 225 QKLLELHGE-SQDVGTKV 241

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>RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a|
          Length = 263

 Score =  187 bits (476), Expect = 2e-47
 Identities = 89/152 (58%), Positives = 120/152 (78%), Gaps = 7/152 (4%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+++T YAQ  Q+RQIR
Sbjct: 105 TRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KM+EIM  +  + DLKE+VNK IP+ IGK++EKA  SI+PL +V+VRKVK+LK PKF+L
Sbjct: 165 KKMMEIMTREVQTNDLKEVVNKLIPDSIGKDMEKACQSIYPLHDVFVRKVKMLKKPKFEL 224

Query: 247 GKLMEVHGDYK-------EDVGVKLDRPDGDE 173
           GKLME+HG+         ++ G K++R DG E
Sbjct: 225 GKLMELHGEGSSSGKATGDETGAKVERADGYE 256

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>RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich protein KRP-A)|
          Length = 264

 Score =  184 bits (468), Expect = 1e-46
 Identities = 91/153 (59%), Positives = 119/153 (77%), Gaps = 8/153 (5%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DKL S+V+KWQTLIEA+VDVKTTD Y+LR+FAIGFTK+R NQVK+TCYAQ +Q++ IR
Sbjct: 105 TRDKLCSMVKKWQTLIEANVDVKTTDGYLLRVFAIGFTKKRNNQVKKTCYAQHAQVKAIR 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KMVEI+  + +S D+KE+VNK IP+ IGK+IEK+   I+PL +V + KVK+LK PKFD+
Sbjct: 165 KKMVEIVSREVSSNDMKEVVNKLIPDSIGKDIEKSCQGIYPLHDVLIHKVKVLKKPKFDV 224

Query: 247 GKLMEVHGD--------YKEDVGVKLDRPDGDE 173
           GKLME+HG+           + G K+DR DG E
Sbjct: 225 GKLMELHGEGSTTTSKGVTSEGGEKVDRVDGYE 257

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>RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)|
          Length = 255

 Score =  182 bits (462), Expect = 7e-46
 Identities = 87/149 (58%), Positives = 121/149 (81%), Gaps = 1/149 (0%)
 Frame = -2

Query: 610 FTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQI 431
           FT+DKLRSLVRKWQ+L+EA+V VKT+D+Y+LR+FAI FTKR+PNQ+K T YAQ+S++R+ 
Sbjct: 104 FTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIAFTKRQPNQIKETTYAQSSKLREA 163

Query: 430 RRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFD 251
           R+KM+EI+  + ++C L +L +K IPEVIG+EIEK+T +IFPLQNV++RKVK+LK PKFD
Sbjct: 164 RKKMIEIIEREVSNCTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFD 223

Query: 250 LGKLMEVHGD-YKEDVGVKLDRPDGDEVI 167
            G L+ +HG+   E+ G K+     D V+
Sbjct: 224 WGSLLALHGEGSTEEKGKKVSSGFKDVVL 252

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>RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)|
          Length = 251

 Score =  182 bits (462), Expect = 7e-46
 Identities = 90/138 (65%), Positives = 113/138 (81%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T+DKLRSLVRKWQ+ IEA+  +KTTD Y+ R+F IGFT RR NQVK+T YAQ+SQIR I 
Sbjct: 105 TSDKLRSLVRKWQSTIEANQTIKTTDGYLCRIFVIGFTSRRVNQVKKTTYAQSSQIRAIH 164

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           +KM +++ NQA  C +KELV K IPEVIG+ IEKAT++I+PLQNV+VRKVKILKAPK D 
Sbjct: 165 QKMFQVIQNQANGCSMKELVQKLIPEVIGRAIEKATNNIYPLQNVFVRKVKILKAPKHDA 224

Query: 247 GKLMEVHGDYKEDVGVKL 194
            KL+E+HG+  +DVG K+
Sbjct: 225 QKLLELHGE-SQDVGSKV 241

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>RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)|
          Length = 254

 Score =  169 bits (429), Expect = 4e-42
 Identities = 82/130 (63%), Positives = 105/130 (80%)
 Frame = -2

Query: 610 FTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQI 431
           FTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+FAI FT+++ NQVKR  YAQ+S IR I
Sbjct: 104 FTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAI 163

Query: 430 RRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFD 251
           R+ + EI+  +  +  L +L +K IPEVI KEIE AT  IFPLQN++VRKVK+LK PKFD
Sbjct: 164 RKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFD 223

Query: 250 LGKLMEVHGD 221
           +G LM +HG+
Sbjct: 224 VGALMALHGE 233

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>RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)|
          Length = 254

 Score =  169 bits (428), Expect = 6e-42
 Identities = 82/130 (63%), Positives = 104/130 (80%)
 Frame = -2

Query: 610 FTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQI 431
           FTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+FAI FT+++ NQVKR  YAQ+S IR I
Sbjct: 104 FTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAI 163

Query: 430 RRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFD 251
           R+ + EI+  +     L +L +K IPEVI KEIE AT  IFPLQN++VRKVK+LK PKFD
Sbjct: 164 RKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFD 223

Query: 250 LGKLMEVHGD 221
           +G LM +HG+
Sbjct: 224 VGALMALHGE 233

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>RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)|
          Length = 267

 Score =  162 bits (411), Expect = 5e-40
 Identities = 78/153 (50%), Positives = 107/153 (69%), Gaps = 8/153 (5%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           TTDK RS+V+KWQTLIEA V+ KT D Y+LR+F IGFT +     ++TCYAQ SQ+R+IR
Sbjct: 108 TTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIR 167

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
            +M +I+ N+ +  DLK+LVNK   + I K+IEK+   I+PL +VY+RKVK+LK P+FD+
Sbjct: 168 ARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDV 227

Query: 247 GKLMEVHGD--------YKEDVGVKLDRPDGDE 173
            KL+E+HGD             G  +DRP+G E
Sbjct: 228 SKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYE 260

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>RS3A_CAEEL (P48154) 40S ribosomal protein S3a|
          Length = 256

 Score =  161 bits (408), Expect = 1e-39
 Identities = 81/147 (55%), Positives = 106/147 (72%), Gaps = 2/147 (1%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T DKL S+V+KW TLIEA+  VKTTD Y LR+F I FTK+  NQVK+T Y + S+IR+IR
Sbjct: 103 THDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYTKTSKIRKIR 162

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
            +M+  +  +   CDLKE+V+K IP+ IGK+IEK  S ++PLQ VY+RKVKI+K PK DL
Sbjct: 163 SEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKVDL 222

Query: 247 GKLMEVHGD--YKEDVGVKLDRPDGDE 173
           G+L ++HGD       G K+DRPD  E
Sbjct: 223 GRLHDLHGDSITVGADGEKVDRPDDYE 249

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>RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)|
          Length = 268

 Score =  159 bits (401), Expect = 8e-39
 Identities = 76/129 (58%), Positives = 96/129 (74%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           TTDKLRS+V KWQTLIE  VDVKTTD +MLR+F IGFT +     ++TCYAQ SQI+ IR
Sbjct: 108 TTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIR 167

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
            KM  I+  +  S DLK +V K +P+ I K+IEKA   ++PL +VY+RKVK+LK P+FDL
Sbjct: 168 AKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDL 227

Query: 247 GKLMEVHGD 221
             LME+HGD
Sbjct: 228 SSLMELHGD 236

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>RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae|
          Length = 203

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 40/116 (34%), Positives = 67/116 (57%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           TTD +RS+V++  + I+A+VDVKT D Y++R+    FT +R         A++SQ++ IR
Sbjct: 88  TTDYIRSIVKRQTSRIDANVDVKTKDGYVIRVKPTCFTIKR---------ARSSQMQAIR 138

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAP 260
             MVEI+  +AA  D +  + + I   +   I +    I+PL+ V +RK ++   P
Sbjct: 139 EMMVEIVKKRAAESDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTEVETIP 194

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>RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
 Frame = -2

Query: 601 DKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRK 422
           D +RSLVR+  + I+  +DV T D Y +R+  + FT RR         A+ SQ R IR++
Sbjct: 83  DYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFTTRR---------AKTSQQRAIRKE 133

Query: 421 MVEIMVNQAASCDLKELVNKFI----PEVIGKEIEKATSSIFPLQNVYVRKVKILKAP 260
           M +++   A  CD  E + + +     E I ++I++A   I+P++   +RK ++L+ P
Sbjct: 134 MFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRKTEVLEEP 191

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>RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae|
          Length = 198

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 39/113 (34%), Positives = 60/113 (53%)
 Frame = -2

Query: 595 LRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMV 416
           +RSLVR+  T I+   ++ T D Y LR+ A+    RR          Q SQ R IR+ M 
Sbjct: 92  IRSLVRRKTTRIDGIFNITTKDGYKLRVMAMAIAMRR---------IQTSQERAIRKIMQ 142

Query: 415 EIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPK 257
           EI+  +A   + K+ V + +   I  EI K    I+PL+   +RK+K+L+ P+
Sbjct: 143 EIIYKKAEELNFKDFVLESVNGKIAAEIAKEAKKIYPLRKAEIRKIKVLEEPQ 195

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>RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 39/113 (34%), Positives = 59/113 (52%)
 Frame = -2

Query: 595 LRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMV 416
           +RSLVR+  T I+   ++ T D Y LR+ A+    RR          Q SQ R IR+ M 
Sbjct: 94  IRSLVRRRTTRIDGIFNITTKDGYRLRVMAMAIAMRR---------IQTSQERAIRKIMQ 144

Query: 415 EIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPK 257
           EI+  +A   + K+ V + +   I  EI K    I+PL+   +RK+K+L  P+
Sbjct: 145 EIIYKKAEELNFKDFVLEAVNGKIAAEIAKEGKKIYPLKKAEIRKIKVLGEPE 197

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>RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 39/113 (34%), Positives = 59/113 (52%)
 Frame = -2

Query: 595 LRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMV 416
           +RSLVR+  T I+   ++ T D Y LR+ A+    RR          Q SQ R IR+ M 
Sbjct: 93  IRSLVRRRTTRIDGIFNITTKDGYKLRVMAMVIAARR---------IQTSQERAIRKIMQ 143

Query: 415 EIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPK 257
           EI+  +A   + K+ V + +   I  EI K    I+PL+   +RK+K+L  P+
Sbjct: 144 EIIYKKAEELNFKDFVLEAVNGKIAAEIAKEAKKIYPLKKAEIRKIKVLGEPE 196

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>RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae|
          Length = 204

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 36/116 (31%), Positives = 67/116 (57%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           TTD +RS+V++  + I+A+VDV+T D +++R+    FT +R         A++SQ++ IR
Sbjct: 88  TTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKR---------ARSSQMQAIR 138

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAP 260
             MV+I+  +A+  D +  + + I   +   I +    I+PL+ V +RK ++   P
Sbjct: 139 EMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTQVEAMP 194

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>RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 62.8 bits (151), Expect = 8e-10
 Identities = 39/116 (33%), Positives = 63/116 (54%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T + L SL R+  + IE  VDV T D Y LR+ ++ FT RR          + SQ R IR
Sbjct: 91  TREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVRR---------CKTSQKRAIR 141

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAP 260
             M +I+V +A+S +  + + + +   +  EI K    I+P++ V +RK+++L  P
Sbjct: 142 AIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIELLAEP 197

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>RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae|
          Length = 197

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 41/115 (35%), Positives = 58/115 (50%)
 Frame = -2

Query: 601 DKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRK 422
           D +RSLVR+  + I A VDV T D YMLR+  +  T  R         A  SQ   IR+ 
Sbjct: 91  DYIRSLVRRKSSKINAVVDVTTKDGYMLRVKGLVLTTYR---------AHISQKTAIRKV 141

Query: 421 MVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPK 257
           + +I   +A   D  + V   I   +  +I +    I+PL+ V + K K+LKAPK
Sbjct: 142 ISDITRKKAEESDFDQFVQDVIFGKLSNDIFQEAKKIYPLRKVEIEKTKLLKAPK 196

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>RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae|
          Length = 221

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 33/116 (28%), Positives = 61/116 (52%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T D +RSLVRK  + + A  +VKT D  ++R+  +G T  R    +++          +R
Sbjct: 97  TRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIGTAQKSA---------MR 147

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAP 260
           +KM+E +V +AA  D  + + + +   +  ++      I P++ V + K+K+LK P
Sbjct: 148 KKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKVLKYP 203

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>RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae|
          Length = 193

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 38/114 (33%), Positives = 58/114 (50%)
 Frame = -2

Query: 601 DKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRK 422
           D +RSLVR+  + I+A  DV T D Y+LR+  +  T  R         A  SQ  +IR+ 
Sbjct: 88  DYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGLALTTYR---------AHRSQKTEIRKI 138

Query: 421 MVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAP 260
           +  I+  +A+     E V   +   +  +I +    I+PL+ V V K K+LKAP
Sbjct: 139 IWNILSTRASETTFDEFVQDIVFGKLSNDIFQQAKKIYPLRKVEVEKTKLLKAP 192

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>RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae|
          Length = 213

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 40/144 (27%), Positives = 72/144 (50%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T D LRSLVR+  + +EA++ V TTD+Y +++  +  T ++         A ASQ + IR
Sbjct: 85  TRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKAIR 135

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDL 248
           R M++++   A     ++L++  +   +   I      I+PL+ V ++K  +   P+   
Sbjct: 136 RTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKTTLEARPE--- 192

Query: 247 GKLMEVHGDYKEDVGVKLDRPDGD 176
               EV  +  E+  V +D  D D
Sbjct: 193 ----EVAAE--EETAVDVDEEDVD 210

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>RS3A_METTH (O27630) 30S ribosomal protein S3Ae|
          Length = 195

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 35/116 (30%), Positives = 62/116 (53%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           TTD +RS++R+  + ++A V V+T D Y L++  +  T RR         A++SQ + +R
Sbjct: 88  TTDYVRSMIRRGTSRVDAPVIVETKDGYKLKVHPLAITIRR---------AKSSQQKYMR 138

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAP 260
           + + E +   A+    +ELV   +   I  EI      I+PL+ V + K ++L+ P
Sbjct: 139 QSIEEHLREIASEKTFEELVEGIVTGKIASEIYHQAKKIYPLKRVEIIKSRVLEEP 194

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>RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae|
          Length = 200

 Score = 56.2 bits (134), Expect = 7e-08
 Identities = 34/112 (30%), Positives = 56/112 (50%)
 Frame = -2

Query: 595 LRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMV 416
           +RSLVR+  T ++   ++ T D Y LR+  +    RR          Q SQ R IR+ + 
Sbjct: 96  IRSLVRRRTTRVDGIFNITTKDGYKLRVMGMVIAYRR---------IQTSQERAIRKIIQ 146

Query: 415 EIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAP 260
           +I+  +A   +  + V + +   I  EI K    I+P++   VRK+K+L  P
Sbjct: 147 DIIYKKAEELNFADFVLQSVNGQIASEIAKEARKIYPIKRAEVRKIKVLAEP 198

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>RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae|
          Length = 208

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 35/123 (28%), Positives = 64/123 (52%)
 Frame = -2

Query: 601 DKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRK 422
           D LRSL+R+  + I +  DV T D Y++R+  +  T  + +Q ++T          IR+ 
Sbjct: 89  DYLRSLIRRKSSKINSIFDVTTKDGYVVRVKGLVLTTYKCHQSQKTA---------IRKI 139

Query: 421 MVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGK 242
           + E +  +A+     +   + +   +  EI +A   I+PL+   + K K+LK P+ +LGK
Sbjct: 140 INETVSKKASELSFDDFTQEVVFGRLANEIFEAAKKIYPLRKAEIEKTKVLKVPE-NLGK 198

Query: 241 LME 233
            +E
Sbjct: 199 QVE 201

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>RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae|
          Length = 206

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 33/117 (28%), Positives = 57/117 (48%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T D  RSLVR+  + +   V V TTD+Y +R+  + +T ++ +Q         SQ   IR
Sbjct: 84  TRDYQRSLVRRGSSKVAVTVTVLTTDDYRVRIQPVAYTTKQADQ---------SQQHAIR 134

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPK 257
           R M++++         + L+N  I   +   I    ++I+PL+ V V K  +   P+
Sbjct: 135 RTMIDLVEEAGEERTFEALLNSIIEGRLSSAIYDEANTIYPLRRVEVEKATLEAHPE 191

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>RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae|
          Length = 215

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 34/125 (27%), Positives = 62/125 (49%)
 Frame = -2

Query: 601 DKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRK 422
           D +R LVR+ +  I+   DVKT+DN ++ +  +  T  +    K+          QIR+ 
Sbjct: 91  DYIRRLVRRRKERIDIIEDVKTSDNSIITVKIVVVTDGKVTNTKKF---------QIRKV 141

Query: 421 MVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGK 242
           + + ++N+  S    E V   I + I  ++  AT  I+PL+ + VRK +++      L  
Sbjct: 142 LTDFILNKGLSLPYSEFVRYLIGDDIYNDMISATKDIYPLKKIEVRKSELV-----SLSG 196

Query: 241 LMEVH 227
           + E+H
Sbjct: 197 ISEIH 201

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>RS3A_METJA (P54059) 30S ribosomal protein S3Ae|
          Length = 222

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 32/117 (27%), Positives = 60/117 (51%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           T + ++S +R+ ++ I+A +DVKT D + +R  A+  T  R N  +++          IR
Sbjct: 95  TREFMKSQIRRRRSRIDAILDVKTQDGHKIRTKAMVLTAYRANTKQKS---------DIR 145

Query: 427 RKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPK 257
           +KM EI+   A      + V   +   + ++I+     IFP++NV + K ++L   K
Sbjct: 146 KKMEEIIKAMAKEKTFPQYVQAMLFGEMAEKIKNECKKIFPIKNVIIYKSEVLSLAK 202

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>RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae|
          Length = 221

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
 Frame = -2

Query: 601 DKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRK 422
           D +R L R+  + +    +V T D Y LR+ A+ FT++R          + SQ   IR+ 
Sbjct: 94  DYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQR---------CKTSQKSAIRKV 144

Query: 421 MVEIMVNQAASCDLKELVNKFI----PEVIGKEIEKATSSIFPLQNVYVRKVKILKAP 260
           M EI+  +A    L EL+   +       +   I+++   I+PL+ V + K K+L  P
Sbjct: 145 MQEIVEQKARESTLDELIQLMVFSDHEGSLAYLIDESARKIYPLRKVEIAKSKLLWVP 202

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>RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae|
          Length = 215

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 32/152 (21%), Positives = 68/152 (44%)
 Frame = -2

Query: 601 DKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRK 422
           D +R LVR+ +  I+   DVKT+D  ++ +  +  +  +    K++         +IR+ 
Sbjct: 91  DYIRRLVRRRKERIDIIEDVKTSDGSIITVKIVVVSDGKLTNTKKS---------EIRKA 141

Query: 421 MVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGK 242
           +   +V++ +     + V   I +    ++ +AT +I+PL+ + +RK            +
Sbjct: 142 LTSFIVSKGSQLSYADFVRYLIGDDSYNDMVEATKNIYPLRKIEIRK-----------SE 190

Query: 241 LMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVA 146
           L+ + G         +  P  +E  PG E +A
Sbjct: 191 LVSLSG---------MQEPQKNEPAPGGEAIA 213

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>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae|
          Length = 209

 Score = 37.0 bits (84), Expect = 0.045
 Identities = 24/111 (21%), Positives = 51/111 (45%)
 Frame = -2

Query: 601 DKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRK 422
           D +R +VR+ +  I+  +  KT D Y L +  +  +  +    KR          ++R K
Sbjct: 90  DTIRRMVRRRKERIDIIMPSKTKDGYRLVIKIVLVSDSKLTANKRG---------EVRSK 140

Query: 421 MVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKIL 269
           ++  +  +  S  L EL    I + +  +I      ++P++ + +RK ++L
Sbjct: 141 IIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYPIKKIEIRKSEVL 191

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>RPOB_STRAW (Q82DQ5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1181

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -2

Query: 349  VIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL-DRPDGDE 173
            ++GK   K  + + P + + +R +   KA +     L   HG+  + +GV++ DR +GDE
Sbjct: 808  LVGKVTPKGETELTPEERL-LRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFDREEGDE 866

Query: 172  VIPGAEEV 149
            + PG  ++
Sbjct: 867  LPPGVNQL 874

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>PGK_MYCMS (P62415) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 404

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
 Frame = -2

Query: 544 VKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVN 365
           V T DN ++  F         N  K   ++  S+I+    K+ + +   A    L+EL+N
Sbjct: 33  VITDDNRIIAAFPT-INYLLENDAKIVLFSHLSRIKSKEDKLKKSLAPVAKR--LEELLN 89

Query: 364 K---FIPEVIGKEIEKATSSIFPLQNVYVRKVK 275
           K   FI +  G+E+EKA SS+   + + V   +
Sbjct: 90  KQVKFINQTRGQELEKAISSLQSKEIILVENTR 122

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>RPOB_STRCO (Q9L0L0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1161

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -2

Query: 349 VIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL-DRPDGDE 173
           ++GK   K  + + P + + +R +   KA +     L   HG+  + +GV++ DR +GDE
Sbjct: 788 LVGKVTPKGETELTPEERL-LRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFDREEGDE 846

Query: 172 VIPGAEEV 149
           + PG  ++
Sbjct: 847 LPPGVNQL 854

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>XPO6A_XENLA (Q53I77) Exportin-6-A|
          Length = 1135

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +2

Query: 398 LVDHDLNHLPADLSDLTCLSIASALDLVWASLGEANGKHAEHV-----IVSGLHIDMSLN 562
           + D     LP +   L C ++++ L L W ++ E   + AE       +++ L  D  L 
Sbjct: 717 VTDSSAQRLPEEAQVLLCRALSNVLLLPWPNVPEGEQQWAERSSHHSNLLNALTRDYRLL 776

Query: 563 EGLPLPHKRPEL 598
           +G  LP ++ +L
Sbjct: 777 KGSSLPQRKGQL 788

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>COOS_RHORU (P31896) Carbon monoxide dehydrogenase (EC 1.2.99.2) (CODH)|
          Length = 639

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 22/84 (26%), Positives = 35/84 (41%)
 Frame = -2

Query: 607 TTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIR 428
           TTDK   +        + H  V+T    ++RM    F +R PN+V    + Q S +    
Sbjct: 356 TTDKHNKISGATHVPFDEHKAVETAKT-IIRMAIAAFGRRDPNRVAIPAFKQKSIVGFSA 414

Query: 427 RKMVEIMVNQAASCDLKELVNKFI 356
             +V  +    A   LK LV+  +
Sbjct: 415 EAVVAALAKVNADDPLKPLVDNVV 438

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>COBQ_VIBPA (Q87HN1) Cobyric acid synthase|
          Length = 483

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
 Frame = -2

Query: 343 GKEIEKATSSIFPLQNVYVRKVKILKAPKFDL---------GKLMEVHGDYKEDVGVKLD 191
           G++I+KA   I P        +  LK+  +D          GK+M + G Y+  +G  +D
Sbjct: 286 GEKIDKADLIILPGTKSVRDDLAYLKSQGWDKDILRHIRLGGKVMGICGGYQM-LGKTID 344

Query: 190 RPDGDEVIPGAEE 152
            PDG E  PG+ E
Sbjct: 345 DPDGVEGEPGSSE 357


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,539,458
Number of Sequences: 219361
Number of extensions: 1403755
Number of successful extensions: 3981
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 3858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3959
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5481822624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result