>NCLN_BRARE (Q6NZ07) Nicalin-1 precursor (Nicastrin-like protein 1)|
          Length = 572

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 30/72 (41%), Positives = 38/72 (52%)
 Frame = -1

Query: 601 VQNDVLDGMFTFYDATKSTLNVYQVASVTFDLLFLLVLGSYLIVLFSFLVITTRGLDDLI 422
           V+ D  D  F FYD  K T+N Y+V    FDLL  + + SYL VL  +L I   GL  L 
Sbjct: 503 VRADKRDPEFVFYDQLKQTMNAYRVKPAIFDLLLAVCIASYLGVL--YLAIQNFGL--LY 558

Query: 421 NIFRRPPSRKVK 386
              RR  + +VK
Sbjct: 559 GFLRRVTAPRVK 570

>NCLN_RAT (Q5XIA1) Nicalin precursor (Nicastrin-like protein)|
          Length = 563

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 20/43 (46%), Positives = 25/43 (58%)
 Frame = -1

Query: 604 HVQNDVLDGMFTFYDATKSTLNVYQVASVTFDLLFLLVLGSYL 476
           HV+ D  D  F FYD  K  +N Y+V    FDLL  L +G+YL
Sbjct: 494 HVKADKRDPEFVFYDQLKQVMNAYRVKPAIFDLLLALCIGAYL 536

>NCLN_MOUSE (Q8VCM8) Nicalin precursor (Nicastrin-like protein)|
          Length = 563

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 20/43 (46%), Positives = 25/43 (58%)
 Frame = -1

Query: 604 HVQNDVLDGMFTFYDATKSTLNVYQVASVTFDLLFLLVLGSYL 476
           HV+ D  D  F FYD  K  +N Y+V    FDLL  L +G+YL
Sbjct: 494 HVKADKRDPEFVFYDQLKQVMNAYRVKPAIFDLLLALCIGAYL 536

>NCLN_CHICK (Q5ZJH2) Nicalin precursor (Nicastrin-like protein)|
          Length = 562

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = -1

Query: 604 HVQNDVLDGMFTFYDATKSTLNVYQVASVTFDLLFLLVLGSYLIVLF 464
           HV+ D  D  F FYD  K  +N Y+V    FDLL  + + +YL V +
Sbjct: 493 HVKADKRDPEFVFYDQLKQVMNAYRVKPAIFDLLLAVCIAAYLGVAY 539

>NCLN_HUMAN (Q969V3) Nicalin precursor (Nicastrin-like protein)|
          Length = 563

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -1

Query: 604 HVQNDVLDGMFTFYDATKSTLNVYQVASVTFDLLFLLVLGSYL 476
           HV+ D  D  F FYD  K  +N Y+V    FDLL  + + +YL
Sbjct: 494 HVKADKRDPEFVFYDQLKQVMNAYRVKPAVFDLLLAVGIAAYL 536


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,155,455
Number of Sequences: 219361
Number of extensions: 1388126
Number of successful extensions: 2702
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2701
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5710231900
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)