ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags31f22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK103487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130M12, full insert sequence Length = 1188 Score = 321 bits (162), Expect = 2e-84 Identities = 270/306 (88%) Strand = Plus / Minus Query: 331 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggga 390 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 907 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttgggaga 848 Query: 391 gacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcaggat 450 || || || || || || |||||||| || ||||||||||||||||||||||||| ||| Sbjct: 847 aacctttgcgatatcgacgttgtttggagtaaccttttcttccataacctgcttcaagat 788 Query: 451 agaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactgctcttgtaa 510 ||| |||||||||||||| ||||| | ||||| ||||| ||||||||||| ||||| Sbjct: 787 agacagggctatggtctcagcctcctgaagggtcaactccttattgtactgctcctgtaa 728 Query: 511 tgagctatcagctccttcagagcccgacccaattgccttggcattgcactgccagaaggt 570 ||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 727 tgagctatcagctccttcagaacctgatccaattgccttggcattgcactgccaaaaggt 668 Query: 571 cccagatgggtccgtgtagtacaagctgggtccattttcatcatgaccagcaataaggag 630 || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 667 tcctgatgggtcagtgtagtacaagctgggtccattctcatcatgaccagcaataaggag 608 Query: 631 agagac 636 |||||| Sbjct: 607 agagac 602
>dbj|AK059521.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C07, full insert sequence Length = 1056 Score = 321 bits (162), Expect = 2e-84 Identities = 270/306 (88%) Strand = Plus / Minus Query: 331 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggga 390 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 802 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttgggaga 743 Query: 391 gacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcaggat 450 || || || || || || |||||||| || ||||||||||||||||||||||||| ||| Sbjct: 742 aacctttgcgatatcgacgttgtttggagtaaccttttcttccataacctgcttcaagat 683 Query: 451 agaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactgctcttgtaa 510 ||| |||||||||||||| ||||| | ||||| ||||| ||||||||||| ||||| Sbjct: 682 agacagggctatggtctcagcctcctgaagggtcaactccttattgtactgctcctgtaa 623 Query: 511 tgagctatcagctccttcagagcccgacccaattgccttggcattgcactgccagaaggt 570 ||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 622 tgagctatcagctccttcagaacctgatccaattgccttggcattgcactgccaaaaggt 563 Query: 571 cccagatgggtccgtgtagtacaagctgggtccattttcatcatgaccagcaataaggag 630 || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 562 tcctgatgggtcagtgtagtacaagctgggtccattctcatcatgaccagcaataaggag 503 Query: 631 agagac 636 |||||| Sbjct: 502 agagac 497
>dbj|AB026561.1| Oryza sativa (japonica cultivar-group) OsPAE1 mRNA for alpha 5 subunit of 20S proteasome, complete cds Length = 1056 Score = 321 bits (162), Expect = 2e-84 Identities = 270/306 (88%) Strand = Plus / Minus Query: 331 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggga 390 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 807 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttgggaga 748 Query: 391 gacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcaggat 450 || || || || || || |||||||| || ||||||||||||||||||||||||| ||| Sbjct: 747 aacctttgcgatatcgacgttgtttggagtaaccttttcttccataacctgcttcaagat 688 Query: 451 agaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactgctcttgtaa 510 ||| |||||||||||||| ||||| | ||||| ||||| ||||||||||| ||||| Sbjct: 687 agacagggctatggtctcagcctcctgaagggtcaactccttattgtactgctcctgtaa 628 Query: 511 tgagctatcagctccttcagagcccgacccaattgccttggcattgcactgccagaaggt 570 ||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 627 tgagctatcagctccttcagaacctgatccaattgccttggcattgcactgccaaaaggt 568 Query: 571 cccagatgggtccgtgtagtacaagctgggtccattttcatcatgaccagcaataaggag 630 || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 567 tcctgatgggtcagtgtagtacaagctgggtccattctcatcatgaccagcaataaggag 508 Query: 631 agagac 636 |||||| Sbjct: 507 agagac 502
>gb|BT019190.1| Zea mays clone Contig862.F mRNA sequence Length = 1161 Score = 276 bits (139), Expect = 8e-71 Identities = 268/311 (86%) Strand = Plus / Plus Query: 330 ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 389 |||||| |||||||||||| ||||| ||||| ||||| |||||||||||||| |||||| Sbjct: 341 ttcacagcctcgcgatgacggcttccacctcggcaggggtgtagaggtggtacttggggg 400 Query: 390 agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcagga 449 || || ||||| || || ||||||||||||||||| |||||||||||||||||||||| Sbjct: 401 caaccttggcaatatcgacgttgtttggggtcaccttctcttccataacctgcttcagga 460 Query: 450 tagaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactgctcttgta 509 ||||||||||||||||||| ||||| || |||||||||||||||||||| || || | Sbjct: 461 tagaaagggctatggtctccgcctcctggagggtcaattccttgttgtactgttcctgca 520 Query: 510 atgagctatcagctccttcagagcccgacccaattgccttggcattgcactgccagaagg 569 | || ||||||||||| ||||| || || ||||||||||| || ||||| ||||| || | Sbjct: 521 aggaactatcagctccctcagaacctgatccaattgcctttgcgttgcattgccaaaatg 580 Query: 570 tcccagatgggtccgtgtagtacaagctgggtccattttcatcatgaccagcaataagga 629 | |||||||| || |||||||||| ||| |||||||| |||||||| |||||||| |||| Sbjct: 581 taccagatggatcagtgtagtacaggctaggtccattctcatcatgtccagcaattagga 640 Query: 630 gagagactcca 640 ||||||||||| Sbjct: 641 gagagactcca 651
>gb|BT017580.1| Zea mays clone EL01N0429D12.c mRNA sequence Length = 1354 Score = 276 bits (139), Expect = 8e-71 Identities = 268/311 (86%) Strand = Plus / Minus Query: 330 ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 389 |||||| |||||||||||| ||||| ||||| ||||| |||||||||||||| |||||| Sbjct: 1121 ttcacagcctcgcgatgacggcttccacctcggcaggggtgtagaggtggtacttggggg 1062 Query: 390 agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcagga 449 || || ||||| || || ||||||||||||||||| |||||||||||||||||||||| Sbjct: 1061 caaccttggcaatatcgacgttgtttggggtcaccttctcttccataacctgcttcagga 1002 Query: 450 tagaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactgctcttgta 509 ||||||||||||||||||| ||||| || |||||||||||||||||||| || || | Sbjct: 1001 tagaaagggctatggtctccgcctcctggagggtcaattccttgttgtactgttcctgca 942 Query: 510 atgagctatcagctccttcagagcccgacccaattgccttggcattgcactgccagaagg 569 | || ||||||||||| ||||| || || ||||||||||| || ||||| ||||| || | Sbjct: 941 aggaactatcagctccctcagaacctgatccaattgcctttgcgttgcattgccaaaatg 882 Query: 570 tcccagatgggtccgtgtagtacaagctgggtccattttcatcatgaccagcaataagga 629 | |||||||| || |||||||||| ||| |||||||| |||||||| |||||||| |||| Sbjct: 881 taccagatggatcagtgtagtacaggctaggtccattctcatcatgtccagcaattagga 822 Query: 630 gagagactcca 640 ||||||||||| Sbjct: 821 gagagactcca 811
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence Length = 1304 Score = 276 bits (139), Expect = 8e-71 Identities = 268/311 (86%) Strand = Plus / Minus Query: 330 ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 389 |||||| |||||||||||| ||||| ||||| ||||| |||||||||||||| |||| | Sbjct: 1014 ttcacagcctcgcgatgacggcttccacctcggcaggggtgtagaggtggtacttgggag 955 Query: 390 agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcagga 449 || || ||||| || || ||||||||||||||||| |||||||||||||||||||||| Sbjct: 954 caaccttggcaatatcgacgttgtttggggtcaccttctcttccataacctgcttcagga 895 Query: 450 tagaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactgctcttgta 509 ||||||||||||||||||| ||||| || |||||||||||||||||||| || || | Sbjct: 894 tagaaagggctatggtctccgcctcctggagggtcaattccttgttgtactgttcctgca 835 Query: 510 atgagctatcagctccttcagagcccgacccaattgccttggcattgcactgccagaagg 569 | || ||||||||||| ||||| || || ||||||||||| || ||||| ||||| || | Sbjct: 834 aggaactatcagctccctcagaacctgatccaattgcctttgcgttgcattgccaaaatg 775 Query: 570 tcccagatgggtccgtgtagtacaagctgggtccattttcatcatgaccagcaataagga 629 | ||||||||||| |||||||||| ||| |||||||| |||||||| |||||||| |||| Sbjct: 774 taccagatgggtcagtgtagtacaggctaggtccattctcatcatgtccagcaattagga 715 Query: 630 gagagactcca 640 ||||||||||| Sbjct: 714 gagagactcca 704
>gb|BT017253.1| Zea mays clone EL01N0307H03.c mRNA sequence Length = 1104 Score = 252 bits (127), Expect = 1e-63 Identities = 265/311 (85%) Strand = Plus / Minus Query: 330 ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 389 |||||| ||||||||| || ||||| ||||| ||||| |||||||||||||| |||| | Sbjct: 911 ttcacagcctcgcgatcacggcttcgacctcggcaggggtgtagaggtggtacttgggag 852 Query: 390 agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcagga 449 || || ||||| || || ||||||||||||||||| || ||||||||||||||||| | Sbjct: 851 caaccttggcaatatcgacgttgtttggggtcaccttctcctccataacctgcttcagaa 792 Query: 450 tagaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactgctcttgta 509 ||||||||||||||||||| ||||| | | | || ||||||||||||||||| || | Sbjct: 791 tagaaagggctatggtctccgcctcctcaagggccagctccttgttgtactgctcctgca 732 Query: 510 atgagctatcagctccttcagagcccgacccaattgccttggcattgcactgccagaagg 569 | ||||||||||||||||||||||| || ||||||||||| || ||||| ||||| || | Sbjct: 731 aggagctatcagctccttcagagccagatccaattgccttcgcgttgcattgccaaaaag 672 Query: 570 tcccagatgggtccgtgtagtacaagctgggtccattttcatcatgaccagcaataagga 629 | ||||||||||| |||||||||| ||| |||||||| ||||| || |||||||| |||| Sbjct: 671 taccagatgggtcggtgtagtacaggctaggtccattctcatcgtgtccagcaattagga 612 Query: 630 gagagactcca 640 ||||||||||| Sbjct: 611 gagagactcca 601
>ref|NM_104262.1| Arabidopsis thaliana PAE1; endopeptidase/ peptidase/ threonine endopeptidase AT1G53850 (PAE1) mRNA, complete cds Length = 1006 Score = 139 bits (70), Expect = 1e-29 Identities = 130/150 (86%) Strand = Plus / Minus Query: 491 ttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgccttg 550 |||||| | |||||||| | |||||||||||||||||||| || || ||||||||||| Sbjct: 669 ttgttgaattgctcttgaagagagctatcagctccttcagaacctgaaccaattgccttt 610 Query: 551 gcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattttca 610 ||||||||||||||||| || || || || || |||||||||||||| |||||||||||| Sbjct: 609 gcattgcactgccagaatgttcctgaaggatcagtgtagtacaagcttggtccattttca 550 Query: 611 tcatgaccagcaataaggagagagactcca 640 ||||| |||||||| || ||||| |||||| Sbjct: 549 tcatggccagcaatgagaagagatactcca 520 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 413 tttggggtcaccttttcttccataacctgcttcaggataga 453 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 747 tttggagtcaccttttcttccataacttgctttaggataga 707
>gb|AY114616.1| Arabidopsis thaliana 20S proteasome subunit PAE1 (At1g53850) mRNA, complete cds Length = 869 Score = 139 bits (70), Expect = 1e-29 Identities = 130/150 (86%) Strand = Plus / Minus Query: 491 ttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgccttg 550 |||||| | |||||||| | |||||||||||||||||||| || || ||||||||||| Sbjct: 554 ttgttgaattgctcttgaagagagctatcagctccttcagaacctgaaccaattgccttt 495 Query: 551 gcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattttca 610 ||||||||||||||||| || || || || || |||||||||||||| |||||||||||| Sbjct: 494 gcattgcactgccagaatgttcctgaaggatcagtgtagtacaagcttggtccattttca 435 Query: 611 tcatgaccagcaataaggagagagactcca 640 ||||| |||||||| || ||||| |||||| Sbjct: 434 tcatggccagcaatgagaagagatactcca 405 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 413 tttggggtcaccttttcttccataacctgcttcaggataga 453 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 632 tttggagtcaccttttcttccataacttgctttaggataga 592
>gb|AY072371.1| Arabidopsis thaliana 20S proteasome subunit PAE1 (At1g53850) mRNA, complete cds Length = 1003 Score = 139 bits (70), Expect = 1e-29 Identities = 130/150 (86%) Strand = Plus / Minus Query: 491 ttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgccttg 550 |||||| | |||||||| | |||||||||||||||||||| || || ||||||||||| Sbjct: 667 ttgttgaattgctcttgaagagagctatcagctccttcagaacctgaaccaattgccttt 608 Query: 551 gcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattttca 610 ||||||||||||||||| || || || || || |||||||||||||| |||||||||||| Sbjct: 607 gcattgcactgccagaatgttcctgaaggatcagtgtagtacaagcttggtccattttca 548 Query: 611 tcatgaccagcaataaggagagagactcca 640 ||||| |||||||| || ||||| |||||| Sbjct: 547 tcatggccagcaatgagaagagatactcca 518 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 413 tttggggtcaccttttcttccataacctgcttcaggataga 453 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 745 tttggagtcaccttttcttccataacttgctttaggataga 705
>dbj|AK220949.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL22-54-C04 Length = 543 Score = 139 bits (70), Expect = 1e-29 Identities = 130/150 (86%) Strand = Plus / Minus Query: 491 ttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgccttg 550 |||||| | |||||||| | |||||||||||||||||||| || || ||||||||||| Sbjct: 196 ttgttgaattgctcttgaagagagctatcagctccttcagaacctgaaccaattgccttt 137 Query: 551 gcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattttca 610 ||||||||||||||||| || || || || || |||||||||||||| |||||||||||| Sbjct: 136 gcattgcactgccagaatgttcctgaaggatcagtgtagtacaagcttggtccattttca 77 Query: 611 tcatgaccagcaataaggagagagactcca 640 ||||| |||||||| || ||||| |||||| Sbjct: 76 tcatggccagcaatgagaagagatactcca 47 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 413 tttggggtcaccttttcttccataacctgcttcaggataga 453 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 274 tttggagtcaccttttcttccataacttgctttaggataga 234
>gb|AY086045.1| Arabidopsis thaliana clone 20801 mRNA, complete sequence Length = 1006 Score = 139 bits (70), Expect = 1e-29 Identities = 130/150 (86%) Strand = Plus / Minus Query: 491 ttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgccttg 550 |||||| | |||||||| | |||||||||||||||||||| || || ||||||||||| Sbjct: 669 ttgttgaattgctcttgaagagagctatcagctccttcagaacctgaaccaattgccttt 610 Query: 551 gcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattttca 610 ||||||||||||||||| || || || || || |||||||||||||| |||||||||||| Sbjct: 609 gcattgcactgccagaatgttcctgaaggatcagtgtagtacaagcttggtccattttca 550 Query: 611 tcatgaccagcaataaggagagagactcca 640 ||||| |||||||| || ||||| |||||| Sbjct: 549 tcatggccagcaatgagaagagatactcca 520 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 413 tttggggtcaccttttcttccataacctgcttcaggataga 453 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 747 tttggagtcaccttttcttccataacttgctttaggataga 707
>gb|AF043524.1|AF043524 Arabidopsis thaliana 20S proteasome subunit PAE1 (PAE1) mRNA, complete cds Length = 1005 Score = 137 bits (69), Expect = 5e-29 Identities = 129/149 (86%) Strand = Plus / Minus Query: 491 ttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgccttg 550 |||||| | |||||||| | |||||||||||||||||||| || || ||||||||||| Sbjct: 647 ttgttgaattgctcttgaagagagctatcagctccttcagaacctgaaccaattgccttt 588 Query: 551 gcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattttca 610 ||||||||||||||||| || || || || || |||||||||||||| |||||||||||| Sbjct: 587 gcattgcactgccagaatgttcctgaaggatcagtgtagtacaagcttggtccattttca 528 Query: 611 tcatgaccagcaataaggagagagactcc 639 ||||| |||||||| || ||||| ||||| Sbjct: 527 tcatggccagcaatgagaagagatactcc 499 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 413 tttggggtcaccttttcttccataacctgcttcaggataga 453 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 725 tttggagtcaccttttcttccataacttgctttaggataga 685
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 489 ccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcct 548 |||| ||||||||||| |||||||||||||||||||||||||| || || |||||||||| Sbjct: 101136 ccttattgtactgctcctgtaatgagctatcagctccttcagaacctgatccaattgcct 101195 Query: 549 tggcattgcactgccagaaggtcccagatgggtccgtgtagtac 592 |||||||||||||||| ||||| || |||||||| ||||||||| Sbjct: 101196 tggcattgcactgccaaaaggttcctgatgggtcagtgtagtac 101239 Score = 85.7 bits (43), Expect = 2e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 590 tacaagctgggtccattttcatcatgaccagcaataaggagagagac 636 ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 101895 tacaagctgggtccattctcatcatgaccagcaataaggagagagac 101941 Score = 81.8 bits (41), Expect = 3e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 422 accttttcttccataacctgcttcaggatagaaagggctatggtctctgcctc 474 ||||||||||||||||||||||||| |||||| |||||||||||||| ||||| Sbjct: 100678 accttttcttccataacctgcttcaagatagacagggctatggtctcagcctc 100730 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Minus Query: 489 ccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcct 548 |||| ||||||||||| ||||| ||||||||| | |||||| || || |||||||||| Sbjct: 88863 ccttattgtactgctcctgtaacaagctatcaggtgcttcaggacctgatccaattgcct 88804 Query: 549 tggcattgcactgccagaaggtcccagatgg 579 || ||||||| ||||| ||||| |||||||| Sbjct: 88803 tgtcattgcattgccaaaaggttccagatgg 88773 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 331 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggg 387 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 100488 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttggg 100544
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 489 ccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcct 548 |||| ||||||||||| |||||||||||||||||||||||||| || || |||||||||| Sbjct: 23085133 ccttattgtactgctcctgtaatgagctatcagctccttcagaacctgatccaattgcct 23085192 Query: 549 tggcattgcactgccagaaggtcccagatgggtccgtgtagtac 592 |||||||||||||||| ||||| || |||||||| ||||||||| Sbjct: 23085193 tggcattgcactgccaaaaggttcctgatgggtcagtgtagtac 23085236 Score = 85.7 bits (43), Expect = 2e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 590 tacaagctgggtccattttcatcatgaccagcaataaggagagagac 636 ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 23085892 tacaagctgggtccattctcatcatgaccagcaataaggagagagac 23085938 Score = 81.8 bits (41), Expect = 3e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 422 accttttcttccataacctgcttcaggatagaaagggctatggtctctgcctc 474 ||||||||||||||||||||||||| |||||| |||||||||||||| ||||| Sbjct: 23084675 accttttcttccataacctgcttcaagatagacagggctatggtctcagcctc 23084727 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Minus Query: 489 ccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcct 548 |||| ||||||||||| ||||| ||||||||| | |||||| || || |||||||||| Sbjct: 23072860 ccttattgtactgctcctgtaacaagctatcaggtgcttcaggacctgatccaattgcct 23072801 Query: 549 tggcattgcactgccagaaggtcccagatgg 579 || ||||||| ||||| ||||| |||||||| Sbjct: 23072800 tgtcattgcattgccaaaaggttccagatgg 23072770 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 331 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggg 387 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 23084485 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttggg 23084541
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 489 ccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcct 548 |||| ||||||||||| |||||||||||||||||||||||||| || || |||||||||| Sbjct: 23395043 ccttattgtactgctcctgtaatgagctatcagctccttcagaacctgatccaattgcct 23395102 Query: 549 tggcattgcactgccagaaggtcccagatgggtccgtgtagtac 592 |||||||||||||||| ||||| || |||||||| ||||||||| Sbjct: 23395103 tggcattgcactgccaaaaggttcctgatgggtcagtgtagtac 23395146 Score = 85.7 bits (43), Expect = 2e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 590 tacaagctgggtccattttcatcatgaccagcaataaggagagagac 636 ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 23395802 tacaagctgggtccattctcatcatgaccagcaataaggagagagac 23395848 Score = 81.8 bits (41), Expect = 3e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 422 accttttcttccataacctgcttcaggatagaaagggctatggtctctgcctc 474 ||||||||||||||||||||||||| |||||| |||||||||||||| ||||| Sbjct: 23394585 accttttcttccataacctgcttcaagatagacagggctatggtctcagcctc 23394637 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Minus Query: 489 ccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcct 548 |||| ||||||||||| ||||| ||||||||| | |||||| || || |||||||||| Sbjct: 23382770 ccttattgtactgctcctgtaacaagctatcaggtgcttcaggacctgatccaattgcct 23382711 Query: 549 tggcattgcactgccagaaggtcccagatgg 579 || ||||||| ||||| ||||| |||||||| Sbjct: 23382710 tgtcattgcattgccaaaaggttccagatgg 23382680 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 331 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggg 387 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 23394395 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttggg 23394451
>ref|NM_112287.2| Arabidopsis thaliana PAE2; endopeptidase/ peptidase/ threonine endopeptidase AT3G14290 (PAE2) mRNA, complete cds Length = 1023 Score = 129 bits (65), Expect = 1e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 488 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 547 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 661 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 602 Query: 548 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 607 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 601 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 542 Query: 608 tcatcatgaccagcaat 624 |||||||| |||||||| Sbjct: 541 tcatcatgcccagcaat 525 Score = 79.8 bits (40), Expect = 1e-11 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 343 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 401 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 806 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 748 Query: 402 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 453 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 747 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 696
>gb|AY062970.1| Arabidopsis thaliana putative 20S proteasome subunit PAE2 (At3g14290) mRNA, complete cds Length = 745 Score = 129 bits (65), Expect = 1e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 488 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 547 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 557 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 498 Query: 548 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 607 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 497 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 438 Query: 608 tcatcatgaccagcaat 624 |||||||| |||||||| Sbjct: 437 tcatcatgcccagcaat 421 Score = 79.8 bits (40), Expect = 1e-11 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 343 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 401 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 702 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 644 Query: 402 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 453 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 643 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 592
>gb|AF370245.1| Arabidopsis thaliana putative 20S proteasome subunit PAE2 (At3g14290) mRNA, complete cds Length = 987 Score = 129 bits (65), Expect = 1e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 488 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 547 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 660 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 601 Query: 548 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 607 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 600 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 541 Query: 608 tcatcatgaccagcaat 624 |||||||| |||||||| Sbjct: 540 tcatcatgcccagcaat 524 Score = 79.8 bits (40), Expect = 1e-11 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 343 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 401 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 805 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 747 Query: 402 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 453 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 746 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 695
>emb|BX823159.1|CNS0A658 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB94ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 129 bits (65), Expect = 1e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 488 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 547 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 635 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 576 Query: 548 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 607 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 575 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 516 Query: 608 tcatcatgaccagcaat 624 |||||||| |||||||| Sbjct: 515 tcatcatgcccagcaat 499 Score = 79.8 bits (40), Expect = 1e-11 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 343 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 401 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 780 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 722 Query: 402 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 453 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 721 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 670
>emb|BX822992.1|CNS0A648 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 948 Score = 129 bits (65), Expect = 1e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 488 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 547 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 595 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 536 Query: 548 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 607 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 535 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 476 Query: 608 tcatcatgaccagcaat 624 |||||||| |||||||| Sbjct: 475 tcatcatgcccagcaat 459 Score = 79.8 bits (40), Expect = 1e-11 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 343 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 401 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 740 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 682 Query: 402 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 453 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 681 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 630
>emb|BX822457.1|CNS0A63I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB3ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 868 Score = 129 bits (65), Expect = 1e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 488 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 547 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 595 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 536 Query: 548 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 607 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 535 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 476 Query: 608 tcatcatgaccagcaat 624 |||||||| |||||||| Sbjct: 475 tcatcatgcccagcaat 459 Score = 65.9 bits (33), Expect = 2e-07 Identities = 89/105 (84%), Gaps = 2/105 (1%) Strand = Plus / Minus Query: 350 gcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaatgtcaac 408 ||||||||||| ||||||||||||||| || ||||| | ||| || |||||||| || Sbjct: 733 gcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaatgtcgac 675 Query: 409 attgtttggggtcaccttttcttccataacctgcttcaggataga 453 ||||||||| || |||||||||||||| || ||||| |||||||| Sbjct: 674 attgtttggagtaaccttttcttccattacttgctttaggataga 630
>emb|BX822092.1|CNS0A644 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZE03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 844 Score = 129 bits (65), Expect = 1e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 488 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 547 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 581 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 522 Query: 548 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 607 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 521 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 462 Query: 608 tcatcatgaccagcaat 624 |||||||| |||||||| Sbjct: 461 tcatcatgcccagcaat 445 Score = 71.9 bits (36), Expect = 2e-09 Identities = 95/112 (84%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 343 gatgaccgcttcaacctctgcaggagtgtagaggtggt-agctgggggagacattcgcaa 401 |||||| ||||||||||| ||||||||||||||| | |||| || | ||| | |||| Sbjct: 726 gatgacggcttcaacctcctgaggagtgtagaggtgataagct-ggtgcgactctggcaa 668 Query: 402 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 453 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 667 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 616
>emb|BX824071.1|CNS0A5L7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 129 bits (65), Expect = 1e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 488 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 547 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 1184 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 1125 Query: 548 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 607 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 1124 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 1065 Query: 608 tcatcatgaccagcaat 624 |||||||| |||||||| Sbjct: 1064 tcatcatgcccagcaat 1048 Score = 71.9 bits (36), Expect = 2e-09 Identities = 95/112 (84%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 343 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 401 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 1329 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 1271 Query: 402 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 453 |||| ||||||||||| ||||||||||||||||| || ||||| ||| |||| Sbjct: 1270 tgtcgacattgtttggagtcaccttttcttccattacttgctttagggtaga 1219
>gb|AF043525.1|AF043525 Arabidopsis thaliana 20S proteasome subunit PAE2 (PAE2) mRNA, complete cds Length = 983 Score = 129 bits (65), Expect = 1e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 488 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 547 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 599 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 540 Query: 548 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 607 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 539 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 480 Query: 608 tcatcatgaccagcaat 624 |||||||| |||||||| Sbjct: 479 tcatcatgcccagcaat 463 Score = 79.8 bits (40), Expect = 1e-11 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 343 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 401 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 744 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 686 Query: 402 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 453 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 685 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 634
>gb|BT014224.1| Lycopersicon esculentum clone 133419F, mRNA sequence Length = 1119 Score = 121 bits (61), Expect = 3e-24 Identities = 118/137 (86%) Strand = Plus / Minus Query: 488 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 547 |||||||| |||||||| || || ||||||||||| |||||||| || |||||||| || Sbjct: 622 tccttgttatactgctcctgcaaagagctatcagcaccttcagaacctgacccaatagct 563 Query: 548 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 607 || |||||||| |||||||| || ||||| || || || |||||||||||||| ||||| Sbjct: 562 ttagcattgcattgccagaatgtaccagaaggatcagtatagtacaagctgggaccattc 503 Query: 608 tcatcatgaccagcaat 624 ||||||||||||||||| Sbjct: 502 tcatcatgaccagcaat 486
>gb|AF255338.1|AF255338 Glycine max 20S proteasome subunit mRNA, complete cds Length = 966 Score = 91.7 bits (46), Expect = 3e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 539 ccaattgccttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctg 598 ||||| || ||| ||||||| ||||| || || |||||||| || |||||||| ||||| Sbjct: 519 ccaatagctttgccattgcattgccaaaatgtgccagatggatcagtgtagtataagcta 460 Query: 599 ggtccattttcatcatgaccagcaataaggagagagactcca 640 |||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 459 ggtccattctcatcatgaccagcaatgaggagagatactcca 418 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 398 gcaatgtcaacattgtttggggtcaccttttcttccataacctgcttca 446 ||||||||||| ||||| || || ||||||||||||||||| ||||||| Sbjct: 660 gcaatgtcaacgttgttgggagtgaccttttcttccataacttgcttca 612
>dbj|AB022220.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLN21 Length = 83906 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 489 ccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcct 548 |||||||| | |||||||| | || |||||||||||||| ||||| ||||||||||||| Sbjct: 30134 ccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcct 30075 Query: 549 tggcattgcactgccagaaggtcccagatgggtccgtgtagtac 592 | |||||||| |||||||| || || ||||| || ||||||||| Sbjct: 30074 ttgcattgcattgccagaatgttcccgatggatctgtgtagtac 30031 Score = 48.1 bits (24), Expect = 0.036 Identities = 71/84 (84%), Gaps = 2/84 (2%) Strand = Plus / Minus Query: 343 gatgaccgcttcaacctctgcaggagtgtagaggtggt-agctgggggagacattcgcaa 401 |||||| ||||||||||| ||||||||||||||| | |||| || | ||| || |||| Sbjct: 30467 gatgacggcttcaacctcctgaggagtgtagaggtgataagct-ggtgcgactttggcaa 30409 Query: 402 tgtcaacattgtttggggtcacct 425 |||| ||||||||||| ||||||| Sbjct: 30408 tgtcgacattgtttggagtcacct 30385 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 590 tacaagctgggtccattttcatcatgaccagcaat 624 |||| ||| ||||||||||||||||| |||||||| Sbjct: 29937 tacaggctcggtccattttcatcatgcccagcaat 29903 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 422 accttttcttccataacctgcttcaggataga 453 |||||||||||||| || ||||| |||||||| Sbjct: 30295 accttttcttccattacttgctttaggataga 30264
>gb|AC009324.2| Arabidopsis thaliana chromosome I BAC T18A20 genomic sequence, complete sequence Length = 85413 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 491 ttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgccttg 550 |||||| | |||||||| | |||||||||||||||||||| || || ||||||||||| Sbjct: 39694 ttgttgaattgctcttgaagagagctatcagctccttcagaacctgaaccaattgccttt 39753 Query: 551 gcattgcactgccagaaggtcccagatgggtccgtgtagtac 592 ||||||||||||||||| || || || || || ||||||||| Sbjct: 39754 gcattgcactgccagaatgttcctgaaggatcagtgtagtac 39795 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 590 tacaagctgggtccattttcatcatgaccagcaataaggagagagactcca 640 |||||||| ||||||||||||||||| |||||||| || ||||| |||||| Sbjct: 39885 tacaagcttggtccattttcatcatggccagcaatgagaagagatactcca 39935 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 422 accttttcttccataacctgcttcaggataga 453 ||||||||||||||||| ||||| |||||||| Sbjct: 39529 accttttcttccataacttgctttaggataga 39560
>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041) gene, complete cds Length = 8735 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| || Sbjct: 5706 ttttgctccgtatgtagtcttctagtgaaatacctaaaaggtcttatattttggaacgga 5647 Query: 61 tggagta 67 |||||| Sbjct: 5646 gggagta 5640 Score = 58.0 bits (29), Expect = 4e-05 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 |||||||||||||| |||| || |||||||||||||||||||||||||| || ||||| Sbjct: 5743 tccgtatgtagttta-tagtacaatctctaaaaggtcttatatttaggaacggagggagt 5801 Query: 67 a 67 | Sbjct: 5802 a 5802
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 |||||||||||||||||| ||||| |||| |||||||| | ||||||||||||||| || Sbjct: 76909 ttttgctccgtatgtagtcgtctagcgaaatctctaaaaagacttatatttaggaacgga 76968 Query: 61 tggagta 67 |||||| Sbjct: 76969 gggagta 76975 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 |||| ||||||| | ||||||||| |||||||| | ||||||||||||||| || ||||| Sbjct: 76872 tccgaatgtagtctactagtgaaacctctaaaaagacttatatttaggaacggagggagt 76813 Query: 67 aca 69 ||| Sbjct: 76812 aca 76810 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 ||||||||||||| |||| | ||| ||||| | |||||||||||||||||| |||| || Sbjct: 23147 ttttgctccgtatatagtctcctaatgaaatccctaaaaggtcttatattttagaacgga 23206 Query: 61 tggagtaca 69 |||||||| Sbjct: 23207 gggagtaca 23215 Score = 46.1 bits (23), Expect = 0.14 Identities = 56/67 (83%) Strand = Plus / Plus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 ||||||||||||||||| || |||| ||| | || ||| | ||||||||||| ||| || Sbjct: 29931 ttttgctccgtatgtagattcttagtaaaatcgcttaaaagacttatatttagaaacgga 29990 Query: 61 tggagta 67 ||||||| Sbjct: 29991 tggagta 29997 Score = 44.1 bits (22), Expect = 0.56 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 ||||||||||| ||| |||| || || ||||||||||||||||||| ||| || ||||| Sbjct: 23110 tccgtatgtag-tttatagtacaatctttaaaaggtcttatatttagaaacggagggagt 23052 Query: 67 ac 68 || Sbjct: 23051 ac 23050 Score = 42.1 bits (21), Expect = 2.2 Identities = 48/57 (84%) Strand = Plus / Minus Query: 11 tatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagta 67 ||||||||| ||||| ||| |||||||| | ||||||||||| ||| || |||||| Sbjct: 29890 tatgtagttcactagtaaaacctctaaaaagacttatatttagaaacggagggagta 29834
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 51 |||||||||||||||||| || || ||||| |||||||||||||||||||| Sbjct: 10483 ttttgctccgtatgtagtcttttaatgaaatctctaaaaggtcttatattt 10533 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 33 tctaaaaggtcttatatttaggaaccgatggagta 67 ||||||||||||||||||||||||| || |||||| Sbjct: 10421 tctaaaaggtcttatatttaggaacggagggagta 10387
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 |||||||||||||||||| | ||||||||| |||||||||||||||||| ||||| || Sbjct: 1658 ttttgctccgtatgtagtctcctagtgaaatacctaaaaggtcttatattttggaacgga 1599 Query: 61 tggagta 67 |||||| Sbjct: 1598 gggagta 1592 Score = 58.0 bits (29), Expect = 4e-05 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 |||||||||||||| |||| || |||||||||||||||||||||||||| || ||||| Sbjct: 1695 tccgtatgtagttta-tagtacaatctctaaaaggtcttatatttaggaacggagggagt 1753 Query: 67 a 67 | Sbjct: 1754 a 1754 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 ||||| |||||||||||| | | | ||||| |||||||||||||||||| ||||| || Sbjct: 142787 ttttgttccgtatgtagtctccgaatgaaatacctaaaaggtcttatattttggaacgga 142846 Query: 61 tggagtaca 69 |||| |||| Sbjct: 142847 tggattaca 142855 Score = 44.1 bits (22), Expect = 0.56 Identities = 49/58 (84%) Strand = Plus / Minus Query: 11 tatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagtac 68 |||||||| || || | ||| |||||||||||||||||||| |||| || ||||||| Sbjct: 217225 tatgtagtcttttaataaaatctctaaaaggtcttatattttagaacggagggagtac 217168 Score = 44.1 bits (22), Expect = 0.56 Identities = 46/53 (86%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 7 tccgtatgtagttttctagtgaaaactct--aaaaggtcttatatttaggaac 57 |||||||||||| || |||||||| |||| |||| | ||||||||||||||| Sbjct: 143280 tccgtatgtagtcttgtagtgaaacctctaaaaaaagacttatatttaggaac 143332 Score = 42.1 bits (21), Expect = 2.2 Identities = 48/57 (84%) Strand = Plus / Plus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaac 57 ||||||| ||||||||| |||||||||| | || ||| | ||||||||||||||| Sbjct: 194434 ttttgcttcgtatgtagacatctagtgaaatcgcttaaaagacttatatttaggaac 194490 Score = 40.1 bits (20), Expect = 8.7 Identities = 43/48 (89%), Gaps = 2/48 (4%) Strand = Plus / Minus Query: 7 tccgtatgtagttttctagtgaaaact-ctaaaaggtcttatatttag 53 |||||||||||||| ||| |||||||| ||||||| ||||||||||| Sbjct: 190812 tccgtatgtagtttcctaatgaaaacttctaaaaga-cttatatttag 190766
>gb|AY785888.1| Hordeum vulgare subsp. vulgare cultivar Optic HvCBF10B (CBF10B) mRNA, complete cds Length = 1041 Score = 69.9 bits (35), Expect = 1e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 9 cgtatgtagttttctagtgaaaactctaaaaggtcttatattt 51 |||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 965 cgtatgtagttttctactgaaatctctaaaaggtcttatattt 923
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 65.9 bits (33), Expect = 2e-07 Identities = 55/61 (90%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 |||||||||||||| |||||| | |||||||||||||||||||||||||| || ||||| Sbjct: 66665 tccgtatgtagttta-tagtgagatctctaaaaggtcttatatttaggaacggagggagt 66607 Query: 67 a 67 | Sbjct: 66606 a 66606 Score = 61.9 bits (31), Expect = 2e-06 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 |||||||||||||||||| | |||||||| | ||||||||||||||||||||||| || Sbjct: 66702 ttttgctccgtatgtagtcta-tagtgaaatttgtaaaaggtcttatatttaggaacgga 66760 Query: 61 tggagta 67 |||||| Sbjct: 66761 gggagta 66767 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 |||||||||||| ||||||||| ||||| || | ||||||||||||||| || ||||| Sbjct: 89246 tccgtatgtagtccactagtgaaatctctagaaagacttatatttaggaacggagggagt 89305 Query: 67 ac 68 || Sbjct: 89306 ac 89307 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 |||||||||||| ||||||||| ||||| || | ||||||||||||||| || ||||| Sbjct: 14550 tccgtatgtagtccactagtgaaatctctacaaagacttatatttaggaacggagggagt 14491 Query: 67 a 67 | Sbjct: 14490 a 14490 Score = 46.1 bits (23), Expect = 0.14 Identities = 56/67 (83%) Strand = Plus / Minus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 ||||||||||||||||| | |||| ||| ||||||| | ||||||||||||||| || Sbjct: 81202 ttttgctccgtatgtagccctttagtaaaatttctaaaaagacttatatttaggaacgga 81143 Query: 61 tggagta 67 |||||| Sbjct: 81142 gggagta 81136
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaa 56 ||||||| |||||||||| ||||||||||| |||||||||||||||||| |||| Sbjct: 5462 ttttgcttcgtatgtagtcttctagtgaaattcctaaaaggtcttatattttggaa 5517 Score = 58.0 bits (29), Expect = 4e-05 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 |||||||||||||| |||| || |||||||||||||||||||||||||| || ||||| Sbjct: 5425 tccgtatgtagttta-tagtataatctctaaaaggtcttatatttaggaacggagggagt 5367 Query: 67 a 67 | Sbjct: 5366 a 5366 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 |||||||||| | ||||||||||| |||| || | ||||||||||||||| || ||||| Sbjct: 21917 tccgtatgtaatcttctagtgaaatctctttaaagacttatatttaggaacagagggagt 21858 Query: 67 a 67 | Sbjct: 21857 a 21857 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 23 tagtgaaaactctaaaaggtcttatatttagga 55 |||||||| |||||||| | ||||||||||||| Sbjct: 21976 tagtgaaatctctaaaaagacttatatttagga 22008
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 61.9 bits (31), Expect = 2e-06 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 ||||||||||||| |||||| ||||| || || ||||||||||||||||||||||| || Sbjct: 61105 ttttgctccgtatctagttta-tagtgtaatctttaaaaggtcttatatttaggaacgga 61163 Query: 61 tggagta 67 |||||| Sbjct: 61164 gggagta 61170 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 35 taaaaggtcttatatttaggaaccgatggagta 67 |||||||| |||||||||||||| || |||||| Sbjct: 60970 taaaaggtgttatatttaggaacggagggagta 60938 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 23 tagtgaaaactctaaaaggtcttatatttaggaaccgatggagta 67 |||||||| |||| ||| | ||||||||||||||| || |||||| Sbjct: 47324 tagtgaaatctcttaaaagacttatatttaggaacggagggagta 47280
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 ||||||||||| ||| || ||||| |||||||| | ||||||||||||||| || ||||| Sbjct: 57404 tccgtatgtagatttttaatgaaacctctaaaaagacttatatttaggaacggagggagt 57345 Query: 67 a 67 | Sbjct: 57344 a 57344 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 |||||||||||| ||||||||| ||||||| | ||||||||||||||| || ||||| Sbjct: 52414 tccgtatgtagtcccctagtgaaacatctaaaaagacttatatttaggaacggagggagt 52473 Query: 67 a 67 | Sbjct: 52474 a 52474
>emb|AJ418041.1|PPA418041 Physcomitrella patens mRNA for 20S proteasome subunit alpha V (zeta gene) Length = 952 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 539 ccaattgccttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctg 598 ||||||||||| |||| || ||||| || || |||||||| || |||| |||||||| Sbjct: 586 ccaattgccttagcatcacattgccaaaatgttccagatggatctgtgtggtacaagcat 527 Query: 599 ggtccattttcatcatgaccagcaataaggagagagactcc 639 |||||| | |||||||| |||||||| || ||||| ||||| Sbjct: 526 ggtccactctcatcatggccagcaatgagcagagaaactcc 486
>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1 gene, complete cds Length = 4098 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 23 tagtgaaaactctaaaaggtcttatatttaggaaccgatggagta 67 ||||| || |||||||||||||||||||||||||| || |||||| Sbjct: 747 tagtgtaatctctaaaaggtcttatatttaggaacggagggagta 703 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 23 tagtgaaaactctaaaaggtcttatatttaggaac 57 ||||| || |||||||| ||||||||||||||||| Sbjct: 819 tagtggaatctctaaaatgtcttatatttaggaac 853
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 58.0 bits (29), Expect = 4e-05 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 |||||||||||||| ||||| || |||||||| ||||||||||||||||| || ||||| Sbjct: 287 tccgtatgtagttta-tagtgcaatctctaaaaagtcttatatttaggaacggagggagt 345 Query: 67 a 67 | Sbjct: 346 a 346 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatattt 51 ||||| ||||||| |||| |||||||| || || ||||||||||||||||| Sbjct: 250 ttttgttccgtatatagtcttctagtggaatctttaaaaggtcttatattt 200 Score = 46.1 bits (23), Expect = 0.14 Identities = 56/67 (83%) Strand = Plus / Plus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 ||||| ||||||||||| || |||||||| ||| || | ||||||||||||||| || Sbjct: 8462 ttttggtccgtatgtagattcttagtgaaatatctttaaagacttatatttaggaacgga 8521 Query: 61 tggagta 67 ||||||| Sbjct: 8522 tggagta 8528
>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene, complete cds Length = 15688 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 |||||||||||||| ||||| || |||||||| | ||||||||||||||| || ||||| Sbjct: 8781 tccgtatgtagtttaatagtggaatctctaaaaagacttatatttaggaactgagggagt 8722 Query: 67 a 67 | Sbjct: 8721 a 8721
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 35 taaaaggtcttatatttaggaaccgatggagta 67 ||||||||||||||||||||||| ||||||||| Sbjct: 1249 taaaaggtcttatatttaggaacggatggagta 1217 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 23 tagtgaaaactctaaaaggtcttatatttaggaaccgatggagtacaaa 71 |||| ||| ||||| |||||||||||||||||||| || |||||||||| Sbjct: 1076 tagtaaaatctctagaaggtcttatatttaggaacggagggagtacaaa 1028 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 32 ctctaaaaggtcttatatttaggaac 57 ||||| |||||||||||||||||||| Sbjct: 1343 ctctagaaggtcttatatttaggaac 1368 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 23 tagtgaaaactctaaaaggtcttatatttaggaaccgatggagta 67 |||||||| |||| ||||||||||||||| |||| || |||||| Sbjct: 1150 tagtgaaatgtctacaaggtcttatatttaagaacggagggagta 1194
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 |||||||||||||||||| | |||||||| | || ||| | ||||||||||||||| || Sbjct: 12735 ttttgctccgtatgtagtctcttagtgaaatcgcttaaaagacttatatttaggaacgga 12676 Query: 61 tggagta 67 |||||| Sbjct: 12675 gggagta 12669 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 |||||||||||| |||||||||| |||||||| | |||||||| ||||| || ||||| Sbjct: 12772 tccgtatgtagtcctctagtgaaatctctaaaaagacttatattatggaacggagggagt 12831 Query: 67 a 67 | Sbjct: 12832 a 12832
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 ||||||||||||||||| ||||||||||| ||| ||| | ||||||||||| ||| || Sbjct: 455 ttttgctccgtatgtagacttctagtgaaatatcttaaaagacttatatttagaaacgga 396 Query: 61 tggagta 67 |||||| Sbjct: 395 gggagta 389 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 ||||||||||||| ||| |||| |||| || ||||||||||||||||| || ||||| Sbjct: 492 tccgtatgtagttcactaaagaaacctctttaaagtcttatatttaggaacggagggagt 551 Query: 67 acaaa 71 ||||| Sbjct: 552 acaaa 556
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaac 57 |||||||||||| | |||||||| |||||||| | ||||||||||||||| Sbjct: 91741 tccgtatgtagtcctatagtgaaacctctaaaaagacttatatttaggaac 91691
>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds Length = 8387 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 |||||||||||| | |||||| || ||||| || | ||||||||||||||| || ||||| Sbjct: 356 tccgtatgtagtctactagtggaatctctagaaagacttatatttaggaacggagggagt 415 Query: 67 aca 69 ||| Sbjct: 416 aca 418
>gb|AF189727.1|AF189727 Hordeum vulgare NRT2.3 gene, promoter sequence Length = 1557 Score = 54.0 bits (27), Expect = 6e-04 Identities = 58/67 (86%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 |||||||| ||||||||| | || ||||| ||||||||| |||||||||||||| | || Sbjct: 520 ttttgctctgtatgtagtata-taatgaaatctctaaaagatcttatatttaggaccgga 578 Query: 61 tggagta 67 ||||||| Sbjct: 579 tggagta 585
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 |||||||||||| ||||||||| ||||| || | ||||||||||||||| || ||||| Sbjct: 90834 tccgtatgtagtccactagtgaaatctctacaaagacttatatttaggaacggagggagt 90893 Query: 67 ac 68 || Sbjct: 90894 ac 90895 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 ||||||||||||| |||||||| ||||| || | ||||||||||||||| || ||||| Sbjct: 71794 tccgtatgtagttcaatagtgaaatctctagaaagacttatatttaggaacggagggagt 71853 Query: 67 a 67 | Sbjct: 71854 a 71854 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaac 57 ||||||| |||||||||| |||| ||||| ||||||| | ||||||||||||||| Sbjct: 71757 ttttgcttcgtatgtagtcctctattgaaatgtctaaaaagacttatatttaggaac 71701
>gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1b) pseudogene, complete sequence Length = 1147 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 |||||||||||| ||||||||| ||||| || | ||||||||||||||| || ||||| Sbjct: 380 tccgtatgtagtccactagtgaaatctctacaaagacttatatttaggaacggagggagt 439 Query: 67 ac 68 || Sbjct: 440 ac 441
>gb|AF474923.1| Hordeum vulgare subsp. vulgare chalcone isomerase (CHI) gene, complete cds Length = 11475 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 23 tagtgaaaactctaaaaggtcttatatttaggaa 56 |||||||| |||||||||||||| |||||||||| Sbjct: 10896 tagtgaaatctctaaaaggtcttgtatttaggaa 10863
>gb|DQ324801.1| Hordeum vulgare subsp. vulgare germin B (GerB) gene, promoter and partial cds Length = 1326 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgatggagt 66 ||||||||||||| ||| |||| |||| || ||||||||||||||||| || ||||| Sbjct: 191 tccgtatgtagttcactaaagaaacctctttaaagtcttatatttaggaacggagggagt 250 Query: 67 acaaa 71 ||||| Sbjct: 251 acaaa 255 Score = 46.1 bits (23), Expect = 0.14 Identities = 56/67 (83%) Strand = Plus / Minus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 ||||||||||||||||| ||||| ||||| ||| ||| | ||||||||||| ||| || Sbjct: 154 ttttgctccgtatgtagacttctactgaaatatcttaaaagacttatatttagaaacgga 95 Query: 61 tggagta 67 |||||| Sbjct: 94 gggagta 88
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 50.1 bits (25), Expect = 0.009 Identities = 59/69 (85%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 ||||||| |||||||||| | |||||||| || ||||||| ||| ||||||||||| || Sbjct: 7467 ttttgcttcgtatgtagtcta-tagtgaaatctttaaaaggacttgtatttaggaacgga 7409 Query: 61 tggagtaca 69 |||||||| Sbjct: 7408 gggagtaca 7400
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Minus Query: 32 ctctaaaaggtcttatatttaggaaccgatggagta 67 |||||||| | ||||||||||||||| ||||||||| Sbjct: 4768 ctctaaaaagacttatatttaggaacggatggagta 4733 Score = 44.1 bits (22), Expect = 0.56 Identities = 40/46 (86%) Strand = Plus / Plus Query: 22 ctagtgaaaactctaaaaggtcttatatttaggaaccgatggagta 67 ||||||||| ||||| || | ||||||||||||||| || |||||| Sbjct: 67903 ctagtgaaatctctacaaagacttatatttaggaacggagggagta 67948
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 48.1 bits (24), Expect = 0.036 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 ||||||| ||||||||||| ||||| || ||| |||| ||||||||||||||||| || Sbjct: 178045 ttttgctttgtatgtagttta-tagtgcaatctccaaaatgtcttatatttaggaacgga 177987 Query: 61 tggagtac 68 || ||||| Sbjct: 177986 tgaagtac 177979 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 33 tctaaaaggtcttatatttaggaaccgatggagta 67 ||||||| ||||||||||||||||| || |||||| Sbjct: 178106 tctaaaatgtcttatatttaggaacggagggagta 178140
>gb|U25649.1|ATU25649 Arabidopsis thaliana putative pectin methylesterase (ATPME2) gene, partial cds, and (ATPME1) gene, complete cds Length = 5873 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 422 accttttcttccataacctgcttcaggataga 453 ||||||||||||||||| ||||| |||||||| Sbjct: 5714 accttttcttccataacttgctttaggataga 5745
>gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 phytochelatin synthetase-like protein (PCS-a) pseudogene, complete sequence Length = 5106 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 26 tgaaaactctaaaaggtcttatatttag 53 ||||| |||||||||||||||||||||| Sbjct: 2222 tgaaatctctaaaaggtcttatatttag 2195 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 ctctaaaaggtcttatatttaggaa 56 |||||||||||||||||| |||||| Sbjct: 2307 ctctaaaaggtcttatatctaggaa 2331
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 39 aggtcttatatttaggaaccgatggagtacaa 70 ||||||||||||||||||| || ||||||||| Sbjct: 40538 aggtcttatatttaggaacggagggagtacaa 40507 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 aggtcttatatttaggaaccgatggagta 67 ||||||||||||||||||| || |||||| Sbjct: 40791 aggtcttatatttaggaacggagggagta 40819
>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139, complete sequence Length = 106089 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 41 gtcttatatttaggaaccgatggagtac 68 ||||||||||||||||| |||||||||| Sbjct: 12452 gtcttatatttaggaacggatggagtac 12425 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 aggtcttatatttaggaaccgatggagta 67 ||||||||||||||||||| || |||||| Sbjct: 12738 aggtcttatatttaggaacggagggagta 12766
>gb|AC105744.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0009C07, complete sequence Length = 124266 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 30 aactctaaaaggtcttatatttaggaaccgatggagtac 68 |||||||||| | ||||||||||| ||||||||||||| Sbjct: 115008 aactctaaaactttttatatttagggaccgatggagtac 114970
>gb|AC124464.3| Mus musculus BAC clone RP24-155I15 from chromosome 19, complete sequence Length = 188587 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 443 ttcaggatagaaagggctatggt 465 ||||||||||||||||||||||| Sbjct: 35064 ttcaggatagaaagggctatggt 35086
>gb|AC126266.3| Mus musculus BAC clone RP23-402N17 from chromosome 19, complete sequence Length = 205037 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 443 ttcaggatagaaagggctatggt 465 ||||||||||||||||||||||| Sbjct: 180084 ttcaggatagaaagggctatggt 180106
>gb|L23648.1| Caenorhabditis elegans cosmid F44B9, complete sequence Length = 36327 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 173 ctggctggaatgctgaaaaataattct 199 |||| |||||||||||||||||||||| Sbjct: 15724 ctgggtggaatgctgaaaaataattct 15750
>emb|AJ272313.1|HVU272313 Hordeum vulgare mRNA for gamma tubulin (gtub gene) Length = 2039 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 33 tctaaaaggtcttatatttaggaaccgatggagta 67 ||||||| | ||||||||||||||| ||||||||| Sbjct: 1940 tctaaaaagacttatatttaggaacggatggagta 1906
>gb|AC105746.10| Oryza sativa chromosome 10 BAC OSJNBb0086I08 genomic sequence, complete sequence Length = 126842 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 30 aactctaaaaggtcttatatttaggaaccgatggagtac 68 |||||||||| | ||||||||||| ||||||||||||| Sbjct: 731 aactctaaaactttttatatttagggaccgatggagtac 693
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttag 53 |||||||||||||| || ||||| |||||||| | ||||||||||| Sbjct: 197594 tccgtatgtagtttaataatgaaacctctaaaaagacttatatttag 197640
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 30 aactctaaaaggtcttatatttaggaaccgatggagtac 68 |||||||||| | ||||||||||| ||||||||||||| Sbjct: 5666391 aactctaaaactttttatatttagggaccgatggagtac 5666429
>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds Length = 5163 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 23 tagtgaaaactctaaaaggtcttatatttaggaac 57 ||||| || ||||| |||||||||||||||||||| Sbjct: 3960 tagtggaatctctagaaggtcttatatttaggaac 3994
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 30 aactctaaaaggtcttatatttaggaaccgatggagtac 68 |||||||||| | ||||||||||| ||||||||||||| Sbjct: 5667578 aactctaaaactttttatatttagggaccgatggagtac 5667616
>gb|M60732.1|BLYCLDAA Hordeum vulgare cold-regulated mRNA, 3' end Length = 653 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 33 tctaaaaggtcttatatttaggaaccgatggagtacaaa 71 |||||||| |||||||||||| ||| || |||||||||| Sbjct: 637 tctaaaagatcttatatttagaaacggagggagtacaaa 599
>dbj|AP006146.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34M22, TM0282, complete sequence Length = 107979 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 35 taaaaggtcttatatttaggaac 57 ||||||||||||||||||||||| Sbjct: 62753 taaaaggtcttatatttaggaac 62775
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 35 taaaaggtcttatatttaggaaccgatggagtac 68 |||||||||||||||| |||||| || ||||||| Sbjct: 30831 taaaaggtcttatattcaggaacggagggagtac 30864 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aaaggtcttatatttaggaa 56 |||||||||||||||||||| Sbjct: 30732 aaaggtcttatatttaggaa 30713
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 44.1 bits (22), Expect = 0.56 Identities = 56/66 (84%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 2 tttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccgat 61 |||||||||||||||| ||| || || || |||||||| | |||||||||||| | ||| Sbjct: 8624 tttgctccgtatgtag-tttatattggaatctctaaaaagacttatatttagggatggat 8566 Query: 62 ggagta 67 |||||| Sbjct: 8565 ggagta 8560
>gb|AC110197.9| Mus musculus chromosome 1, clone RP24-405O20, complete sequence Length = 144856 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 30 aactctaaaaggtcttatattt 51 |||||||||||||||||||||| Sbjct: 81121 aactctaaaaggtcttatattt 81100
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 atatttaggaaccgatggagta 67 |||||||||||||||||||||| Sbjct: 17105538 atatttaggaaccgatggagta 17105559 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 41 gtcttatatttaggaaccgatggagtac 68 ||||||||||| ||||| |||||||||| Sbjct: 26776178 gtcttatattttggaacggatggagtac 26776151
>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete sequence Length = 157662 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 atatttaggaaccgatggagta 67 |||||||||||||||||||||| Sbjct: 136284 atatttaggaaccgatggagta 136305
>gb|AC146587.20| Medicago truncatula clone mth2-144j8, complete sequence Length = 113373 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 tacgaaccaaacacacacaaat 151 |||||||||||||||||||||| Sbjct: 56652 tacgaaccaaacacacacaaat 56673
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 atatttaggaaccgatggagta 67 |||||||||||||||||||||| Sbjct: 17099107 atatttaggaaccgatggagta 17099128 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 41 gtcttatatttaggaaccgatggagtac 68 ||||||||||| ||||| |||||||||| Sbjct: 26867501 gtcttatattttggaacggatggagtac 26867474
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 30 aactctaaaaggtcttatatttaggaaccgatggagta 67 |||||||||| ||||||||||| || || ||||||||| Sbjct: 23741644 aactctaaaacgtcttatattttgggacggatggagta 23741681
>gb|AC093765.3| Homo sapiens BAC clone RP11-97F8 from 4, complete sequence Length = 177059 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 513 agctatcagctccttcagagcc 534 |||||||||||||||||||||| Sbjct: 133968 agctatcagctccttcagagcc 133989
>gb|AF308474.1|AF308474 Hordeum vulgare asparaginase gene, complete cds Length = 2659 Score = 44.1 bits (22), Expect = 0.56 Identities = 44/50 (88%), Gaps = 1/50 (2%) Strand = Plus / Minus Query: 7 tccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaa 56 |||||||||||||| ||| ||||| || ||||| | |||||||||||||| Sbjct: 1504 tccgtatgtagttt-ctaatgaaacctttaaaaagacttatatttaggaa 1456
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1058_F07 Length = 95841 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 30 aactctaaaaggtcttatatttaggaaccgatggagta 67 |||||||||| ||||||||||| || || ||||||||| Sbjct: 52228 aactctaaaacgtcttatattttgggacggatggagta 52265
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Minus Query: 23 tagtgaaaactctaaaaggtcttatatttaggaaccgatggagtacaaac 72 |||||||| ||||| || | |||||||||||||| || ||||||||||| Sbjct: 2829 tagtgaaatctctacaaagacttatatttaggaatggagggagtacaaac 2780
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 32 ctctaaaaggtcttatatttaggaaccgatggagtac 68 |||||||| | ||||||||||||||| || ||||||| Sbjct: 1342 ctctaaaaagacttatatttaggaacagagggagtac 1378 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 32 ctctaaaaggtcttatatttaggaaccgatggagta 67 |||||||| | ||||||||||||||| || |||||| Sbjct: 1251 ctctaaaaagacttatatttaggaacggagggagta 1216
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 33 tctaaaaggtcttatatttaggaaccgatggagtaca 69 ||||||| | ||||||||||||||| || |||||||| Sbjct: 49946 tctaaaaagacttatatttaggaacagagggagtaca 49910
>emb|CT009558.5| M.truncatula DNA sequence from clone MTH2-72I11 on chromosome 3, complete sequence Length = 145085 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 43 cttatatttaggaaccgatggagta 67 ||||||||||||||| ||||||||| Sbjct: 112245 cttatatttaggaacggatggagta 112269
>gb|AC133189.3| Mus musculus BAC clone RP23-354M9 from chromosome 15, complete sequence Length = 198577 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 ctctaaaaggtcttatattta 52 ||||||||||||||||||||| Sbjct: 60208 ctctaaaaggtcttatattta 60188
>gb|AC025972.6|AC025972 Homo sapiens chromosome 11, clone RP11-6K5, complete sequence Length = 165962 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 ataacctgcttcaggatagaa 454 ||||||||||||||||||||| Sbjct: 111611 ataacctgcttcaggatagaa 111591
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 43 cttatatttaggaaccgatggagta 67 |||||||||||| |||||||||||| Sbjct: 24765216 cttatatttagggaccgatggagta 24765192 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 341 gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 381 |||||||| || || ||||||| ||| |||||||||||||| Sbjct: 18912624 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 18912664
>gb|BC090701.1| Danio rerio cDNA clone IMAGE:7140566 Length = 2815 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 tttagtagtagagatgtttta 131 ||||||||||||||||||||| Sbjct: 2532 tttagtagtagagatgtttta 2512
>emb|CR854847.7| Zebrafish DNA sequence from clone DKEY-266L9 in linkage group 11, complete sequence Length = 48855 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 tttagtagtagagatgtttta 131 ||||||||||||||||||||| Sbjct: 33052 tttagtagtagagatgtttta 33072
>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds Length = 11462 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 43 cttatatttaggaaccgatggagtacaaa 71 ||||||||||||||| || |||||||||| Sbjct: 3636 cttatatttaggaacggagggagtacaaa 3664
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 43 cttatatttaggaaccgatggagta 67 |||||||||||| |||||||||||| Sbjct: 24693422 cttatatttagggaccgatggagta 24693398 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 341 gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 381 |||||||| || || ||||||| ||| |||||||||||||| Sbjct: 18838851 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 18838891
>emb|AL954829.6|CNS08CD5 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140383 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 43 cttatatttaggaaccgatggagta 67 |||||||||||| |||||||||||| Sbjct: 72373 cttatatttagggaccgatggagta 72349
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 341 gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 381 |||||||| || || ||||||| ||| |||||||||||||| Sbjct: 57755 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 57715
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151203 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 341 gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 381 |||||||| || || ||||||| ||| |||||||||||||| Sbjct: 8741 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 8781
>dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT35C17, TM0399, complete sequence Length = 94919 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 aggtcttatatttaggaaccgatggagta 67 ||||||||||||||||||| || |||||| Sbjct: 78631 aggtcttatatttaggaacggagggagta 78659
>dbj|AP006687.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT41F23, TM0382, complete sequence Length = 99748 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 aggtcttatatttaggaaccgatggagta 67 ||||||||||||||||||| || |||||| Sbjct: 4757 aggtcttatatttaggaacggagggagta 4785 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 aggtcttatatttaggaaccgatggagta 67 ||||||||||||||||||| || |||||| Sbjct: 4505 aggtcttatatttaggaacggagggagta 4477
>dbj|AP006654.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT31E21, TM0340, complete sequence Length = 120480 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 aaaggtcttatatttaggaac 57 ||||||||||||||||||||| Sbjct: 18035 aaaggtcttatatttaggaac 18015
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 aaaggtcttatatttaggaac 57 ||||||||||||||||||||| Sbjct: 26721 aaaggtcttatatttaggaac 26741
>dbj|AP006424.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT13E04, TM0314, complete sequence Length = 126349 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 aaaggtcttatatttaggaac 57 ||||||||||||||||||||| Sbjct: 26891 aaaggtcttatatttaggaac 26871
>dbj|AP006381.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09G09, TM0234, complete sequence Length = 105887 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 aggtcttatatttaggaaccgatggagta 67 ||||||||||||||||||| || |||||| Sbjct: 26351 aggtcttatatttaggaacggagggagta 26323
>dbj|AP006356.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT06I08, TM0082b, complete sequence Length = 93398 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 aggtcttatatttaggaaccgatggagta 67 ||||||||||||||||||| || |||||| Sbjct: 25852 aggtcttatatttaggaacggagggagta 25824
>dbj|AP006143.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L07, TM0254, complete sequence Length = 118592 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 aggtcttatatttaggaaccgatggagta 67 ||||||||||||||||||| || |||||| Sbjct: 68731 aggtcttatatttaggaacggagggagta 68703 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 aggtcttatatttaggaaccgatggagta 67 ||||||||||||||||||| || |||||| Sbjct: 57061 aggtcttatatttaggaacggagggagta 57033
>dbj|AP006135.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT30O01, TM0233, complete sequence Length = 126062 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 aaaggtcttatatttaggaac 57 ||||||||||||||||||||| Sbjct: 113034 aaaggtcttatatttaggaac 113014
>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226, complete sequence Length = 140838 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 aaaggtcttatatttaggaac 57 ||||||||||||||||||||| Sbjct: 127292 aaaggtcttatatttaggaac 127312
>dbj|AP006124.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT15N01, TM0209, complete sequence Length = 104684 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 aaaggtcttatatttaggaac 57 ||||||||||||||||||||| Sbjct: 97355 aaaggtcttatatttaggaac 97375
>dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G09, TM0173b, complete sequence Length = 66866 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 aggtcttatatttaggaaccgatggagta 67 ||||||||||||||||||| || |||||| Sbjct: 3271 aggtcttatatttaggaacggagggagta 3299
>dbj|AP006074.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT40O02, TM0111b, complete sequence Length = 92724 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 aaaggtcttatatttaggaac 57 ||||||||||||||||||||| Sbjct: 18016 aaaggtcttatatttaggaac 17996
>dbj|AP004942.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT43P05, TM0113, complete sequence Length = 101270 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 aaaggtcttatatttaggaac 57 ||||||||||||||||||||| Sbjct: 96897 aaaggtcttatatttaggaac 96877
>dbj|AP004937.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT08M07, TM0096a, complete sequence Length = 24390 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 aaaggtcttatatttaggaac 57 ||||||||||||||||||||| Sbjct: 17197 aaaggtcttatatttaggaac 17217
>dbj|AP004927.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01G01, TM0081a, complete sequence Length = 60689 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 aaaggtcttatatttaggaac 57 ||||||||||||||||||||| Sbjct: 16572 aaaggtcttatatttaggaac 16592
>dbj|AP004629.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT07I01b, TM0091b, complete sequence Length = 59720 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 aaaggtcttatatttaggaac 57 ||||||||||||||||||||| Sbjct: 21750 aaaggtcttatatttaggaac 21730
>dbj|AP004543.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08G20, TM0102b, complete sequence Length = 38490 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 aggtcttatatttaggaaccgatggagta 67 ||||||||||||||||||| || |||||| Sbjct: 37287 aggtcttatatttaggaacggagggagta 37259
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 aggtcttatatttaggaaccgatggagta 67 ||||||||||||||||||| || |||||| Sbjct: 69552 aggtcttatatttaggaacggagggagta 69524
>dbj|AP004520.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT05P01, TM0048, complete sequence Length = 110811 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 aaaggtcttatatttaggaac 57 ||||||||||||||||||||| Sbjct: 51321 aaaggtcttatatttaggaac 51301
>dbj|AP004489.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT04I02, TM0021, complete sequence Length = 83700 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 aggtcttatatttaggaaccgatggagta 67 ||||||||||||||||||| || |||||| Sbjct: 44823 aggtcttatatttaggaacggagggagta 44851
>dbj|AP004482.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT17C05, TM0014, complete sequence Length = 129532 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 aaaggtcttatatttaggaac 57 ||||||||||||||||||||| Sbjct: 115964 aaaggtcttatatttaggaac 115984
>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2) gene, intron 1 Length = 5159 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttag 53 ||||||| |||||||||| | ||| ||||| |||||||| ||||||||||| Sbjct: 1265 ttttgcttcgtatgtagtctcctaatgaaatctctaaaaaaccttatatttag 1213
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 32 ctctaaaaggtcttatatttaggaaccgatggagta 67 |||||||| | ||||||||||||||| || |||||| Sbjct: 1257 ctctaaaaagacttatatttaggaacggagggagta 1222
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 26 tgaaaactctaaaaggtcttatatttaggaac 57 ||||| |||||||| | ||||||||||||||| Sbjct: 260199 tgaaatctctaaaaagacttatatttaggaac 260168
>gb|AC079736.13| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003G23, complete sequence Length = 135931 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 41 gtcttatatttaggaaccgatggagtac 68 ||||||||||| ||||| |||||||||| Sbjct: 58034 gtcttatattttggaacggatggagtac 58061
>gb|AC140680.4| Mus musculus BAC clone RP24-548A12 from chromosome Y, complete sequence Length = 222176 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 62982 aaactctaaaaagtcttatattta 63005 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 1379 aaactctaaaaagtcttatattta 1402
>gb|AC145586.4| Mus musculus BAC clone RP24-167J1 from chromosome Y, complete sequence Length = 158469 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 135065 aaactctaaaaagtcttatattta 135088
>gb|AC140388.3| Mus musculus BAC clone RP24-194N20 from chromosome Y, complete sequence Length = 168850 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 124453 aaactctaaaaagtcttatattta 124430
>gb|AC145267.5| Mus musculus BAC clone RP24-161F7 from chromosome Y, complete sequence Length = 159830 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 134751 aaactctaaaaagtcttatattta 134774
>gb|AC131783.4| Mus musculus BAC clone RP24-377P12 from chromosome Y, complete sequence Length = 223801 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 26072 aaactctaaaaagtcttatattta 26049
>gb|AC129594.3| Mus musculus BAC clone RP24-319J19 from chromosome Y, complete sequence Length = 147674 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 145809 aaactctaaaaagtcttatattta 145832
>gb|AC140371.3| Mus musculus BAC clone RP24-220G21 from chromosome Y, complete sequence Length = 190597 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 52223 aaactctaaaaagtcttatattta 52200 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 46214 aaactctaaaaagtcttatattta 46191
>gb|AC145346.3| Mus musculus BAC clone RP24-76G8 from chromosome Y, complete sequence Length = 207267 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 20528 aaactctaaaaagtcttatattta 20505
>gb|AC140401.4| Mus musculus BAC clone RP24-89O8 from chromosome Y, complete sequence Length = 244637 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 218275 aaactctaaaaagtcttatattta 218298
>gb|AC145742.3| Mus musculus BAC clone RP24-225F21 from chromosome Y, complete sequence Length = 183572 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 1786 aaactctaaaaagtcttatattta 1763
>gb|AC145581.3| Mus musculus BAC clone RP24-151A14 from chromosome Y, complete sequence Length = 155089 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 140461 aaactctaaaaagtcttatattta 140438
>gb|AC140925.4| Mus musculus BAC clone RP24-140B17 from chromosome Y, complete sequence Length = 172606 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 96849 aaactctaaaaagtcttatattta 96826
>gb|AC145605.3| Mus musculus BAC clone RP24-246N9 from chromosome Y, complete sequence Length = 147478 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 12704 aaactctaaaaagtcttatattta 12727
>gb|AC145603.3| Mus musculus BAC clone RP24-319B23 from chromosome Y, complete sequence Length = 149766 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 867 aaactctaaaaagtcttatattta 890
>gb|AC147163.2| Mus musculus BAC clone RP24-317B17 from chromosome Y, complete sequence Length = 208700 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 858 aaactctaaaaagtcttatattta 881
>gb|AC142265.4| Mus musculus BAC clone RP24-360F24 from chromosome Y, complete sequence Length = 164772 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 56849 aaactctaaaaagtcttatattta 56826
>gb|AC144579.2| Mus musculus BAC clone RP24-375M15 from chromosome Y, complete sequence Length = 162972 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 16230 aaactctaaaaagtcttatattta 16207
>gb|AC129289.4| Mus musculus BAC clone RP24-482E11 from chromosome Y, complete sequence Length = 181755 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 1568 aaactctaaaaagtcttatattta 1591
>gb|AC183431.1| Mus musculus BAC clone RP24-128G23 from chromosome y, complete sequence Length = 158633 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 137903 aaactctaaaaagtcttatattta 137880
>gb|AC184101.1| Mus musculus BAC clone RP24-534I7 from chromosome y, complete sequence Length = 147390 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 131475 aaactctaaaaagtcttatattta 131498
>ref|NM_148976.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1 (PSMA1), transcript variant 1, mRNA Length = 1480 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 761 tcatcataaccagcaataaggaga 738
>ref|NM_002786.2| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1 (PSMA1), transcript variant 2, mRNA Length = 1238 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 519 tcatcataaccagcaataaggaga 496
>gb|AC175670.3| Mus musculus BAC clone RP24-304I16 from chromosome y, complete sequence Length = 168071 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 50750 aaactctaaaaagtcttatattta 50727
>gb|AC175494.3| Mus musculus BAC clone RP24-75G20 from chromosome y, complete sequence Length = 229858 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 199615 aaactctaaaaagtcttatattta 199592
>gb|AC147126.2| Mus musculus BAC clone RP24-561J22 from chromosome Y, complete sequence Length = 141049 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 54165 aaactctaaaaagtcttatattta 54142
>gb|AC145299.3| Mus musculus BAC clone RP24-129J23 from chromosome Y, complete sequence Length = 152085 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 114864 aaactctaaaaagtcttatattta 114841
>gb|AC140435.3| Mus musculus BAC clone RP24-172H21 from chromosome Y, complete sequence Length = 191085 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 17303 aaactctaaaaagtcttatattta 17326
>gb|AC141875.4| Mus musculus BAC clone RP24-316O22 from chromosome Y, complete sequence Length = 170988 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 867 aaactctaaaaagtcttatattta 890
>gb|AC145593.3| Mus musculus BAC clone RP24-186P6 from chromosome Y, complete sequence Length = 162710 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 156907 aaactctaaaaagtcttatattta 156884
>gb|AC140258.4| Mus musculus BAC clone RP24-295F23 from chromosome Y, complete sequence Length = 176758 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 17822 aaactctaaaaagtcttatattta 17845
>gb|AC144582.3| Mus musculus BAC clone RP24-323J22 from chromosome Y, complete sequence Length = 214364 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 89124 aaactctaaaaagtcttatattta 89147
>gb|AC142451.4| Mus musculus BAC clone RP24-443M4 from chromosome Y, complete sequence Length = 138426 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 66269 aaactctaaaaagtcttatattta 66292
>gb|AC142412.3| Mus musculus BAC clone RP24-75E18 from chromosome Y, complete sequence Length = 175697 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 148325 aaactctaaaaagtcttatattta 148348
>gb|AC129191.4| Mus musculus BAC clone RP24-81F10 from chromosome Y, complete sequence Length = 241616 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 160416 aaactctaaaaagtcttatattta 160439
>gb|AC130833.3| Mus musculus BAC clone RP24-91H16 from chromosome Y, complete sequence Length = 208378 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 27062 aaactctaaaaagtcttatattta 27085 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 21053 aaactctaaaaagtcttatattta 21076
>gb|AC130834.4| Mus musculus BAC clone RP24-119M1 from chromosome Y, complete sequence Length = 189883 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 139823 aaactctaaaaagtcttatattta 139800
>gb|AC145344.2| Mus musculus BAC clone RP24-134P13 from chromosome Y, complete sequence Length = 183987 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 120370 aaactctaaaaagtcttatattta 120347
>gb|AC130836.4| Mus musculus BAC clone RP24-147P10 from chromosome Y, complete sequence Length = 199089 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 198006 aaactctaaaaagtcttatattta 197983
>gb|AC132341.4| Mus musculus BAC clone RP24-168C11 from chromosome Y, complete sequence Length = 142720 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 95421 aaactctaaaaagtcttatattta 95398
>gb|AC145266.3| Mus musculus BAC clone RP24-174A3 from chromosome Y, complete sequence Length = 143481 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 87339 aaactctaaaaagtcttatattta 87362
>gb|AC140427.3| Mus musculus BAC clone RP24-173G7 from chromosome Y, complete sequence Length = 182766 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 103010 aaactctaaaaagtcttatattta 103033
>gb|AC144855.3| Mus musculus BAC clone RP24-179H2 from chromosome Y, complete sequence Length = 152731 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 75320 aaactctaaaaagtcttatattta 75297
>gb|AC139196.4| Mus musculus BAC clone RP24-189L24 from chromosome Y, complete sequence Length = 143221 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 141850 aaactctaaaaagtcttatattta 141827
>gb|AC145596.3| Mus musculus BAC clone RP24-211L15 from chromosome Y, complete sequence Length = 155644 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 12154 aaactctaaaaagtcttatattta 12177
>gb|AC147159.2| Mus musculus BAC clone RP24-259B7 from chromosome Y, complete sequence Length = 150659 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 18502 aaactctaaaaagtcttatattta 18479
>gb|AC144552.3| Mus musculus BAC clone RP24-271M6 from chromosome Y, complete sequence Length = 166988 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 126606 aaactctaaaaagtcttatattta 126629
>gb|AC141877.3| Mus musculus BAC clone RP24-280M5 from chromosome Y, complete sequence Length = 143283 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 23362 aaactctaaaaagtcttatattta 23385
>gb|AC145564.4| Mus musculus BAC clone RP24-482K19 from chromosome Y, complete sequence Length = 188188 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 99032 aaactctaaaaagtcttatattta 99055
>gb|AC140474.3| Mus musculus BAC clone RP24-406O7 from chromosome Y, complete sequence Length = 123100 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 66020 aaactctaaaaagtcttatattta 65997
>gb|AC144409.3| Mus musculus BAC clone RP24-302I24 from chromosome Y, complete sequence Length = 148555 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 36911 aaactctaaaaagtcttatattta 36888
>gb|AC132285.4| Mus musculus BAC clone RP24-354N13 from chromosome Y, complete sequence Length = 166915 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 94542 aaactctaaaaagtcttatattta 94565
>gb|AC144581.3| Mus musculus BAC clone RP24-341C2 from chromosome Y, complete sequence Length = 162743 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 87208 aaactctaaaaagtcttatattta 87231
>ref|XM_803137.1| Trypanosoma cruzi strain CL Brener proteasome alpha 5 subunit (Tc00.1047053511145.43) partial mRNA Length = 738 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 ttcttccataacctgcttcaggat 450 ||||||||| |||||||||||||| Sbjct: 624 ttcttccatcacctgcttcaggat 601
>ref|XM_806426.1| Trypanosoma cruzi strain CL Brener proteasome alpha 5 subunit (Tc00.1047053504069.53) partial mRNA Length = 738 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 ttcttccataacctgcttcaggat 450 ||||||||| |||||||||||||| Sbjct: 624 ttcttccatcacctgcttcaggat 601
>gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete sequence Length = 120527 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 36 aaaaggtcttatatttaggaaccgatggagta 67 |||||||||||||| ||||||| |||||||| Sbjct: 107407 aaaaggtcttatatataggaacgaatggagta 107438
>gb|AC144389.22| Medicago truncatula clone mth2-25e14, complete sequence Length = 127170 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gtccattttcatcatgacca 619 |||||||||||||||||||| Sbjct: 109939 gtccattttcatcatgacca 109958
>gb|AC119419.9| Medicago truncatula clone mth2-6b12, complete sequence Length = 106395 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 36 aaaaggtcttatatttaggaaccgatggagta 67 ||||||||||||| |||||||| || |||||| Sbjct: 67050 aaaaggtcttataattaggaacggaaggagta 67019
>emb|AL645698.1| Human DNA sequence from clone RP5-1070D5 on chromosome 1, complete sequence Length = 15023 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 cctgcttcaggatagaaagg 457 |||||||||||||||||||| Sbjct: 6684 cctgcttcaggatagaaagg 6703
>emb|AL590115.7| Human DNA sequence from clone RP11-255O17 on chromosome 1 Contains a novel gene, the LHX9 gene for LIM homeobox 9 and a CpG island, complete sequence Length = 182527 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 tgaaaaataattctttttgg 205 |||||||||||||||||||| Sbjct: 37692 tgaaaaataattctttttgg 37711
>gb|AC175667.3| Mus musculus BAC clone RP24-372I14 from chromosome y, complete sequence Length = 167889 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 10929 aaactctaaaaagtcttatattta 10906
>emb|X61969.1|HSMPNU H.sapiens mRNA for macropain subunit nu Length = 1244 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 521 tcatcataaccagcaataaggaga 498
>gb|AC142409.4| Mus musculus BAC clone RP24-185L20 from chromosome y, complete sequence Length = 150886 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 127011 aaactctaaaaagtcttatattta 127034
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 44 ttatatttaggaaccgatggagtacaaa 71 ||||||||||| || ||||||||||||| Sbjct: 68380 ttatatttagggacggatggagtacaaa 68407
>gb|BC022372.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:23915 IMAGE:4770620), complete cds Length = 1167 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 449 tcatcataaccagcaataaggaga 426
>gb|BC009576.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:14575 IMAGE:4105838), complete cds Length = 958 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 470 tcatcataaccagcaataaggaga 447
>gb|BC015105.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:22853 IMAGE:3950568), complete cds Length = 1218 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 496 tcatcataaccagcaataaggaga 473
>gb|BC015356.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:21459 IMAGE:3452219), complete cds Length = 1169 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 465 tcatcataaccagcaataaggaga 442
>gb|BC002577.2| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:1667 IMAGE:3140784), complete cds Length = 1219 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 481 tcatcataaccagcaataaggaga 458
>gb|BC008472.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:14751 IMAGE:4282076), complete cds Length = 1174 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 462 tcatcataaccagcaataaggaga 439
>gb|BC005932.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:14542 IMAGE:4078894), complete cds Length = 1215 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 497 tcatcataaccagcaataaggaga 474
>gb|AC174232.4| Mus musculus BAC clone RP24-66G1 from chromosome y, complete sequence Length = 196032 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 40971 aaactctaaaaagtcttatattta 40994
>emb|AJ295252.1|TCR295252 Trypanosoma cruzi mRNA for proteasome subunit alpha5 (PRCZ gene) Length = 910 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 ttcttccataacctgcttcaggat 450 ||||||||| |||||||||||||| Sbjct: 650 ttcttccatcacctgcttcaggat 627
>gb|BT008064.1| Synthetic construct Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1 mRNA, partial cds Length = 792 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 416 tcatcataaccagcaataaggaga 393
>gb|BT006647.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1 mRNA, complete cds Length = 792 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 416 tcatcataaccagcaataaggaga 393
>emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chromosome 11 Contains the gene for a novel protein (3732413I11Rik), a novel gene (4930597A21Rik), the 5' end of the Ebf1 gene for early B-cell factor 1, a novel gene and a CpG island, complete sequence Length = 215524 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 taaacaaacgaatgactgga 249 |||||||||||||||||||| Sbjct: 158298 taaacaaacgaatgactgga 158279
>gb|AC184105.1| Mus musculus chromosome UNK clone CH35-62A13, complete sequence Length = 168299 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 24712 aaactctaaaaagtcttatattta 24735
>gb|AC184103.1| Mus musculus chromosome UNK clone CH35-73N5, complete sequence Length = 179651 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 70760 aaactctaaaaagtcttatattta 70783
>gb|AC182253.3| Mus musculus BAC clone RP24-320A8 from chromosome y, complete sequence Length = 181955 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 9091 aaactctaaaatgtcttatattta 9068
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 ctatggtctctgcctcagcg 478 |||||||||||||||||||| Sbjct: 2859001 ctatggtctctgcctcagcg 2858982
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 caattccttgttgtactgct 503 |||||||||||||||||||| Sbjct: 735040 caattccttgttgtactgct 735059
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gtttggggtcaccttttctt 431 |||||||||||||||||||| Sbjct: 59604 gtttggggtcaccttttctt 59585
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gtttggggtcaccttttctt 431 |||||||||||||||||||| Sbjct: 157651 gtttggggtcaccttttctt 157632
>emb|CR623849.1| full-length cDNA clone CS0DA006YP22 of Neuroblastoma of Homo sapiens (human) Length = 1156 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 491 tcatcataaccagcaataaggaga 468
>emb|CR620774.1| full-length cDNA clone CS0DI030YJ03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1146 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 454 tcatcataaccagcaataaggaga 431
>emb|CR617103.1| full-length cDNA clone CS0DI052YO22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1129 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 473 tcatcataaccagcaataaggaga 450
>emb|CR612800.1| full-length cDNA clone CS0DA012YD16 of Neuroblastoma of Homo sapiens (human) Length = 1218 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 551 tcatcataaccagcaataaggaga 528
>emb|CR610121.1| full-length cDNA clone CS0DI083YG05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1144 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 457 tcatcataaccagcaataaggaga 434
>emb|CR607472.1| full-length cDNA clone CS0DB001YP20 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1527 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 872 tcatcataaccagcaataaggaga 849
>emb|CR607412.1| full-length cDNA clone CS0DE014YI10 of Placenta of Homo sapiens (human) Length = 1165 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 480 tcatcataaccagcaataaggaga 457
>emb|CR599736.1| full-length cDNA clone CS0DK007YL19 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1105 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 414 tcatcataaccagcaataaggaga 391
>emb|CR599649.1| full-length cDNA clone CS0DI069YC24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1133 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 459 tcatcataaccagcaataaggaga 436
>emb|CR598938.1| full-length cDNA clone CS0DI075YJ10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1090 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 414 tcatcataaccagcaataaggaga 391
>emb|CR597642.1| full-length cDNA clone CL0BB027ZF05 of Neuroblastoma of Homo sapiens (human) Length = 1143 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 454 tcatcataaccagcaataaggaga 431
>gb|AC182448.2| Mus musculus BAC clone RP24-490J20 from chromosome y, complete sequence Length = 222797 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 115744 aaactctaaaaagtcttatattta 115767
>gb|DQ220740.1| Aegilops sharonensis genomic sequence Length = 3804 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 ttttgctccgtatgtagttttcta 24 ||||||||||||| |||||||||| Sbjct: 2724 ttttgctccgtatatagttttcta 2747
>gb|AC182730.2| Mus musculus BAC clone RP24-254G5 from chromosome y, complete sequence Length = 162064 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 110817 aaactctaaaaagtcttatattta 110794
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 tggtggtacaacgtcttagtgcta 226 ||||||||| |||||||||||||| Sbjct: 535253 tggtggtaccacgtcttagtgcta 535276
>ref|NM_079730.2| Drosophila melanogaster klingon CG6669-RA (klg), mRNA Length = 4037 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 attctttttggtggtacaac 214 |||||||||||||||||||| Sbjct: 3269 attctttttggtggtacaac 3250
>gb|AC182761.2| Mus musculus BAC clone RP24-91P5 from chromosome y, complete sequence Length = 212528 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 188019 aaactctaaaaagtcttatattta 188042
>gb|AC175744.2| Mus musculus BAC clone RP24-163J18 from chromosome y, complete sequence Length = 147935 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 139359 aaactctaaaaagtcttatattta 139382
>gb|AC177797.3| Mus musculus BAC clone RP24-558G11 from chromosome y, complete sequence Length = 174066 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 138293 aaactctaaaaagtcttatattta 138316
>gb|AC175381.3| Mus musculus BAC clone RP24-195K22 from chromosome y, complete sequence Length = 159477 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 123479 aaactctaaaaagtcttatattta 123456
>gb|AY060363.1| Drosophila melanogaster LD10776 full length cDNA Length = 4052 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 attctttttggtggtacaac 214 |||||||||||||||||||| Sbjct: 3269 attctttttggtggtacaac 3250
>gb|AC150443.2| Medicago truncatula chromosome 7 BAC clone mth2-71o19, complete sequence Length = 132097 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gtccattttcatcatgacca 619 |||||||||||||||||||| Sbjct: 4086 gtccattttcatcatgacca 4105
>gb|U78177.1|DMU78177 Drosophila melanogaster Klingon (klingon) mRNA, complete cds Length = 3927 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 attctttttggtggtacaac 214 |||||||||||||||||||| Sbjct: 3159 attctttttggtggtacaac 3178
>gb|AC182034.2| Mus musculus BAC clone RP24-188M3 from chromosome y, complete sequence Length = 164621 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 35104 aaactctaaaaagtcttatattta 35127
>gb|AC155301.2| Mus musculus BAC clone RP24-216J21 from chromosome 13, complete sequence Length = 192299 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tagttttctagtgaaaactc 34 |||||||||||||||||||| Sbjct: 138211 tagttttctagtgaaaactc 138192
>gb|AF287726.1|AF287726 Hordeum vulgare clone pFL699 1,4-beta-D xylan xylanohydrolase gene, complete cds Length = 5474 Score = 40.1 bits (20), Expect = 8.7 Identities = 57/68 (83%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 1 ttttgctccgtatgtagttttctagtgaaaactctaaaaggtcttatatttaggaaccga 60 ||||| |||||||||||| | || ||||| || ||||||| || |||||||||||| || Sbjct: 465 ttttgttccgtatgtagtata-tattgaaatctttaaaaggcctgatatttaggaacgga 523 Query: 61 tggagtac 68 ||||||| Sbjct: 524 gggagtac 531 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 ctctaaaaggtcttatattt 51 |||||||||||||||||||| Sbjct: 404 ctctaaaaggtcttatattt 385
>gb|AC181976.2| Mus musculus BAC clone RP24-413C10 from chromosome y, complete sequence Length = 150838 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 127327 aaactctaaaaagtcttatattta 127304
>gb|AC175461.3| Mus musculus BAC clone RP24-64J17 from chromosome y, complete sequence Length = 219754 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 134974 aaactctaaaaagtcttatattta 134997
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 44 ttatatttaggaaccgatggagtacaaa 71 ||||||||||| || ||||||||||||| Sbjct: 26291803 ttatatttagggacggatggagtacaaa 26291830
>gb|AC008199.4|AC008199 Drosophila melanogaster, chromosome 3R, region 94D-94D, BAC clone BACR01K08, complete sequence Length = 177127 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 attctttttggtggtacaac 214 |||||||||||||||||||| Sbjct: 52886 attctttttggtggtacaac 52867
>gb|AC145572.4| Mus musculus BAC clone RP24-95P13 from chromosome y, complete sequence Length = 181745 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 162253 aaactctaaaaagtcttatattta 162276
>gb|AC175389.2| Mus musculus BAC clone RP24-152N3 from chromosome y, complete sequence Length = 123765 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 54941 aaactctaaaaagtcttatattta 54918
>gb|AC175033.2| Mus musculus BAC clone RP24-283I7 from chromosome y, complete sequence Length = 153678 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 46158 aaactctaaaaagtcttatattta 46181
>gb|AC140452.4| Mus musculus BAC clone RP24-120F24 from chromosome unknown, complete sequence Length = 199125 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 120466 aaactctaaaaagtcttatattta 120489 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaactctaaaaggtcttatattta 52 ||||||||||| |||||||||||| Sbjct: 114457 aaactctaaaaagtcttatattta 114480
>gb|AC147927.3| Ovis aries clone CH243-129I22, complete sequence Length = 187152 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 tttctagtgaaaactctaaaaggt 42 ||||||||||||||| |||||||| Sbjct: 70256 tttctagtgaaaactttaaaaggt 70233
>gb|AY892634.1| Synthetic construct Homo sapiens clone FLH015536.01L proteasome alpha type subunit 1 (PSMA1) mRNA, partial cds Length = 792 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 416 tcatcataaccagcaataaggaga 393
>gb|AY890152.1| Synthetic construct Homo sapiens clone FLH015541.01X proteasome subunit alpha type 1 (PSMA1) mRNA, complete cds Length = 792 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 416 tcatcataaccagcaataaggaga 393
>gb|AY890151.1| Synthetic construct Homo sapiens clone FLH015540.01X proteasome subunit alpha type 1 (PSMA1) mRNA, complete cds Length = 792 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 416 tcatcataaccagcaataaggaga 393
>emb|BX322587.10| Zebrafish DNA sequence from clone RP71-36A1 in linkage group 22, complete sequence Length = 104515 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tatgtagttttctagtgaaa 30 |||||||||||||||||||| Sbjct: 74866 tatgtagttttctagtgaaa 74885
>gb|AC155881.2| Medicago truncatula chromosome 7 BAC clone mte1-60d3, complete sequence Length = 100208 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 36 aaaaggtcttatatttaggaaccgatggagta 67 |||||||||||||| ||||||| |||||||| Sbjct: 46070 aaaaggtcttatatataggaacgaatggagta 46039
>gb|AE003741.2| Drosophila melanogaster chromosome 3R, section 79 of 118 of the complete sequence Length = 233356 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 attctttttggtggtacaac 214 |||||||||||||||||||| Sbjct: 80784 attctttttggtggtacaac 80765
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 gtttggggtcaccttttctt 431 |||||||||||||||||||| Sbjct: 85095 gtttggggtcaccttttctt 85114
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 accgcttcaacctctgcagg 366 |||||||||||||||||||| Sbjct: 1363782 accgcttcaacctctgcagg 1363801
>dbj|D00759.1|HUMPSC2 Homo sapiens mRNA for proteasome subunit C2, complete cds Length = 1105 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 tcatcatgaccagcaataaggaga 631 ||||||| |||||||||||||||| Sbjct: 457 tcatcataaccagcaataaggaga 434
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ttcaggatagaaagggctat 462 |||||||||||||||||||| Sbjct: 775357 ttcaggatagaaagggctat 775338
>emb|CT010471.11| Mouse DNA sequence from clone RP23-20A5 on chromosome 13, complete sequence Length = 219145 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tagttttctagtgaaaactc 34 |||||||||||||||||||| Sbjct: 104944 tagttttctagtgaaaactc 104925 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,627,158 Number of Sequences: 3902068 Number of extensions: 6627158 Number of successful extensions: 123290 Number of sequences better than 10.0: 263 Number of HSP's better than 10.0 without gapping: 265 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 122079 Number of HSP's gapped (non-prelim): 1194 length of query: 640 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 617 effective length of database: 17,143,297,704 effective search space: 10577414683368 effective search space used: 10577414683368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
