>FILA_MOUSE (P11088) Filaggrin (Fragment)|
          Length = 336

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 387 HHDYTSTQEHQAGYSYTQQTNQEHQESSQH 476
           H +  S  +HQ G+ + QQ   +HQ   QH
Sbjct: 157 HSEEESDSQHQHGHQHEQQRGHQHQHQHQH 186

>SHH_RAT (Q63673) Sonic hedgehog protein precursor (SHH) [Contains: Sonic|
           hedgehog protein N-product; Sonic hedgehog protein
           C-product]
          Length = 437

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 188 VSAGIDWVYTKRKASVNDQIKAGFFSFSYPSEGC 87
           V AG DWVY + KA ++  +KA   S +  S+GC
Sbjct: 167 VEAGFDWVYYESKARIHCSVKAE-NSVAAKSDGC 199

>Y241_METJA (Q57693) Hypothetical protein MJ0241|
          Length = 145

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 664 LCIVCVDRKGMMAEVTSALTACGITICSCVAERD 563
           L IV  DR G++A++TS ++  G  I S V ER+
Sbjct: 79  LQIVAKDRIGLLADITSRISKIGGNITSTVLERE 112

>ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing protein ZFN-like 4|
          Length = 404

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 469 LNTGACAHLQLCSHSHQSPQNGTAAHPFLFCYLSLP 576
           L TGAC +   C + H   +NG  A P +F  + LP
Sbjct: 100 LKTGACKYGPTCKYHHPKDRNG--AQPVMFNVIGLP 133

>SI1L2_RAT (Q5JCS6) Signal-induced proliferation-associated 1-like protein 2|
            (Serine-rich synapse-associated protein)
          Length = 1722

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +2

Query: 521  PLKMEQQHTHSSSVISLCHTRTYGDSASCQSRSNFSHHPFSINTHYAK 664
            P KM   H ++S++ S     + GD +   S S+ SH   S +TH +K
Sbjct: 1311 PAKMYTLHGYASAISSSAADGSMGDLSEVSSHSSGSHRSGSPSTHCSK 1358


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,042,479
Number of Sequences: 219361
Number of extensions: 1979659
Number of successful extensions: 4803
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4795
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)