ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags31f16 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ011807.1|HVU011807 Hordeum vulgare chloroplast tRNA-fMet and tRNA-Gly (UCC and GCC) genes Length = 2975 Score = 1267 bits (639), Expect = 0.0 Identities = 639/639 (100%) Strand = Plus / Minus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1927 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 1868 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1867 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 1808 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1807 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 1748 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1747 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 1688 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1687 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 1628 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1627 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 1568 Query: 437 aaaactatcgttttttagctatttggcttccttatcctttaacaaaagaagatttagtta 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1567 aaaactatcgttttttagctatttggcttccttatcctttaacaaaagaagatttagtta 1508 Query: 497 cgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttcaaaa 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1507 cgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttcaaaa 1448 Query: 557 ttggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcatatcataatc 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1447 ttggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcatatcataatc 1388 Query: 617 caatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatgtata 676 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1387 caatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatgtata 1328 Query: 677 ttcttcctcaatatgctattgagaggaaaaggatttaat 715 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1327 ttcttcctcaatatgctattgagaggaaaaggatttaat 1289
>emb|X02560.1|CHTATRN1 Wheat chloroplast genes for tRNA-Gly (GCC), tRNA-Met (CAU) and tRNA-Gly (UCC) Length = 2358 Score = 1148 bits (579), Expect = 0.0 Identities = 625/639 (97%), Gaps = 6/639 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1362 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 1421 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1422 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 1481 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1482 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 1541 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1542 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 1601 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1602 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 1661 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1662 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 1721 Query: 437 aaaactatcgttttttagctatttggcttccttatcctttaacaaaagaagatttagtta 496 ||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| Sbjct: 1722 aaaactatcgttttttagctatttggcttccttattccttattttaagaagatttagtta 1781 Query: 497 cgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttcaaaa 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1782 cgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttcaaaa 1841 Query: 557 ttggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcatatcataatc 616 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1842 ttggaatactt-aatccaatgcaaaattatgcttcgcgactctgtac-----tcataatc 1895 Query: 617 caatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatgtata 676 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1896 caatttttattttggatgcaatttaaattagtctttggatacaaatcgccagaatgtata 1955 Query: 677 ttcttcctcaatatgctattgagaggaaaaggatttaat 715 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1956 ttcttcctcaatatgctattgagaggaaaaggatttaat 1994
>dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragment bearing RNA polymerase subunit (rpo) genes Length = 21245 Score = 1148 bits (579), Expect = 0.0 Identities = 625/639 (97%), Gaps = 6/639 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1803 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 1862 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1863 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 1922 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1923 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 1982 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1983 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 2042 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2043 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 2102 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2103 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 2162 Query: 437 aaaactatcgttttttagctatttggcttccttatcctttaacaaaagaagatttagtta 496 ||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| Sbjct: 2163 aaaactatcgttttttagctatttggcttccttattccttattttaagaagatttagtta 2222 Query: 497 cgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttcaaaa 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2223 cgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttcaaaa 2282 Query: 557 ttggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcatatcataatc 616 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2283 ttggaatactt-aatccaatgcaaaattatgcttcgcgactctgtac-----tcataatc 2336 Query: 617 caatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatgtata 676 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 2337 caatttttattttggatgcaatttaaattagtctttggatacaaatcgccagaatgtata 2396 Query: 677 ttcttcctcaatatgctattgagaggaaaaggatttaat 715 ||||||||||||||||||||||||||||||||||||||| Sbjct: 2397 ttcttcctcaatatgctattgagaggaaaaggatttaat 2435
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1148 bits (579), Expect = 0.0 Identities = 625/639 (97%), Gaps = 6/639 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13157 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 13216 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13217 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 13276 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13277 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 13336 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13337 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 13396 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13397 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 13456 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13457 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 13516 Query: 437 aaaactatcgttttttagctatttggcttccttatcctttaacaaaagaagatttagtta 496 ||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| Sbjct: 13517 aaaactatcgttttttagctatttggcttccttattccttattttaagaagatttagtta 13576 Query: 497 cgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttcaaaa 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13577 cgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttcaaaa 13636 Query: 557 ttggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcatatcataatc 616 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 13637 ttggaatactt-aatccaatgcaaaattatgcttcgcgactctgtac-----tcataatc 13690 Query: 617 caatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatgtata 676 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 13691 caatttttattttggatgcaatttaaattagtctttggatacaaatcgccagaatgtata 13750 Query: 677 ttcttcctcaatatgctattgagaggaaaaggatttaat 715 ||||||||||||||||||||||||||||||||||||||| Sbjct: 13751 ttcttcctcaatatgctattgagaggaaaaggatttaat 13789 Score = 44.1 bits (22), Expect = 0.63 Identities = 28/30 (93%) Strand = Plus / Plus Query: 84 atggagcgggtagcgggaatcgaacccgca 113 ||||||| ||||| |||||||||||||||| Sbjct: 36539 atggagccggtagtgggaatcgaacccgca 36568
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 926 bits (467), Expect = 0.0 Identities = 598/637 (93%), Gaps = 6/637 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12927 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 12986 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12987 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 13046 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 13047 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 13106 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 13107 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 13166 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 13167 aatt-tgcctaaatctatctaatctaattacttcgttccctaatttcatttaagagatcc 13225 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 13226 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 13285 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 13286 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagaagatttag 13345 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | Sbjct: 13346 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatattttaa 13405 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 13406 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcca 13464 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 13465 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 13524 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 13525 catattcttcctcaatatgctattgagagaaaaagga 13561 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 84 atggagcgggtagcgggaatcgaacccgca 113 ||||||||||||| |||||||||||||||| Sbjct: 36030 atggagcgggtagtgggaatcgaacccgca 36059
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 926 bits (467), Expect = 0.0 Identities = 598/637 (93%), Gaps = 6/637 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96342 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 96401 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 96402 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 96461 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 96462 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 96521 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 96522 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 96581 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 96582 aatt-tgcctaaatctatctaatctaattacttcgttccctaatttcatttaagagatcc 96640 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 96641 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 96700 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 96701 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagaagatttag 96760 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | Sbjct: 96761 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatattttaa 96820 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 96821 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcca 96879 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 96880 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 96939 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 96940 catattcttcctcaatatgctattgagagaaaaagga 96976 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 84 atggagcgggtagcgggaatcgaacccgca 113 ||||||||||||| |||||||||||||||| Sbjct: 41355 atggagcgggtagtgggaatcgaacccgca 41384
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 926 bits (467), Expect = 0.0 Identities = 598/637 (93%), Gaps = 6/637 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242221 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 9242280 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9242281 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 9242340 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 9242341 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 9242400 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 9242401 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 9242460 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 9242461 aatt-tgcctaaatctatctaatctaattacttcgttccctaatttcatttaagagatcc 9242519 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9242520 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 9242579 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 9242580 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagaagatttag 9242639 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | Sbjct: 9242640 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatattttaa 9242699 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9242700 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcca 9242758 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 9242759 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 9242818 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 9242819 catattcttcctcaatatgctattgagagaaaaagga 9242855 Score = 926 bits (467), Expect = 0.0 Identities = 598/637 (93%), Gaps = 6/637 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9138316 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 9138375 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9138376 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 9138435 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 9138436 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 9138495 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 9138496 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 9138555 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 9138556 aatt-tgcctaaatctatctaatctaattacttcgttccctaatttcatttaagagatcc 9138614 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9138615 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 9138674 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 9138675 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagaagatttag 9138734 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | Sbjct: 9138735 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatattttaa 9138794 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9138795 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcca 9138853 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 9138854 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 9138913 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 9138914 catattcttcctcaatatgctattgagagaaaaagga 9138950 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 84 atggagcgggtagcgggaatcgaacccgca 113 ||||||||||||| |||||||||||||||| Sbjct: 9083429 atggagcgggtagtgggaatcgaacccgca 9083458 Score = 46.1 bits (23), Expect = 0.16 Identities = 65/75 (86%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 338 atctacttacttcgttccctaatttcattcaagagatcctgaggaaaagaattgggtttc 397 ||||| |||||| ||||| |||||||||| |||||||| |||| |||| |||| |||||| Sbjct: 20404915 atctaattactt-gttccttaatttcatttaagagatc-tgag-aaaataattaggtttc 20404859 Query: 398 caccgagctgaaaca 412 || ||||||||||| Sbjct: 20404858 tacggagctgaaaca 20404844
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 926 bits (467), Expect = 0.0 Identities = 598/637 (93%), Gaps = 6/637 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12930 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 12989 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12990 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 13049 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 13050 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 13109 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 13110 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 13169 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 13170 aatt-tgcctaaatctatctaatctaattacttcgttccctaatttcatttaagagatcc 13228 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 13229 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 13288 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 13289 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagaagatttag 13348 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | Sbjct: 13349 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatattttaa 13408 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 13409 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcca 13467 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 13468 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 13527 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 13528 catattcttcctcaatatgctattgagagaaaaagga 13564 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 84 atggagcgggtagcgggaatcgaacccgca 113 ||||||||||||| |||||||||||||||| Sbjct: 36004 atggagcgggtagtgggaatcgaacccgca 36033
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 918 bits (463), Expect = 0.0 Identities = 597/637 (93%), Gaps = 6/637 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12994 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 13053 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 13054 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 13113 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 13114 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 13173 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 13174 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 13233 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 13234 aatt-tgcctaaatctatctaatctaattacttcgttccctaatttcatttaagagatcc 13292 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 13293 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 13352 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 13353 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagaagatttag 13412 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| | Sbjct: 13413 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatatttaaa 13472 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 13473 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcca 13531 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 13532 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 13591 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 13592 catattcttcctcaatatgctattgagagaaaaagga 13628 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 84 atggagcgggtagcgggaatcgaacccgca 113 ||||||||||||| |||||||||||||||| Sbjct: 36072 atggagcgggtagtgggaatcgaacccgca 36101
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 918 bits (463), Expect = 0.0 Identities = 597/637 (93%), Gaps = 6/637 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12994 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 13053 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 13054 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 13113 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 13114 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 13173 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 13174 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 13233 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 13234 aatt-tgcctaaatctatctaatctaattacttcgttccctaatttcatttaagagatcc 13292 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 13293 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 13352 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 13353 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagaagatttag 13412 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| | Sbjct: 13413 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatatttaaa 13472 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 13473 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcca 13531 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 13532 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 13591 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 13592 catattcttcctcaatatgctattgagagaaaaagga 13628 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 84 atggagcgggtagcgggaatcgaacccgca 113 ||||||||||||| |||||||||||||||| Sbjct: 36072 atggagcgggtagtgggaatcgaacccgca 36101
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 918 bits (463), Expect = 0.0 Identities = 597/637 (93%), Gaps = 6/637 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7761208 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 7761267 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 7761268 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 7761327 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 7761328 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 7761387 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 7761388 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 7761447 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 7761448 aatt-tgcctaaatctatctaatctaattacttcgttccctaatttcatttaagagatcc 7761506 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 7761507 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 7761566 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 7761567 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagaagatttag 7761626 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| | Sbjct: 7761627 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatatttaaa 7761686 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 7761687 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcca 7761745 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 7761746 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 7761805 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 7761806 catattcttcctcaatatgctattgagagaaaaagga 7761842 Score = 902 bits (455), Expect = 0.0 Identities = 596/637 (93%), Gaps = 7/637 (1%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33565005 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 33565064 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 33565065 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 33565124 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 33565125 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 33565184 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 33565185 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 33565244 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 33565245 aatt-tgcctaaatctatctaatctaattacttcgttccctaatttcatttaagagatcc 33565303 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 33565304 tga-gaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 33565362 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 33565363 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagaagatttag 33565422 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| | Sbjct: 33565423 ttacgattggaaataaatttttttgtatctttatccatagatcctttactcatattttaa 33565482 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 33565483 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcca 33565541 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 33565542 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 33565601 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 33565602 catattcttcctcaatatgctattgagagaaaaagga 33565638 Score = 500 bits (252), Expect = e-138 Identities = 321/342 (93%), Gaps = 4/342 (1%) Strand = Plus / Plus Query: 167 cgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatggatatt 226 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 33498180 cgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgggtatt 33498239 Query: 227 ctcaccacttaacatctatgtcagcttttctatttgaatggaaccaaagctctctgcttt 286 |||||||||||||||||| |||||||||| | | ||||||||||||| |||||||||||| Sbjct: 33498240 ctcaccacttaacatctaagtcagcttttttgtctgaatggaaccaaggctctctgcttt 33498299 Query: 287 ctagatgatccttatagagtaggagatagaaattctatctaaatccatctaatctactta 346 ||||||||||| || ||||||||||||||||||| | ||||||| |||||||||| ||| Sbjct: 33498300 ctagatgatccctaaagagtaggagatagaaatt-tgcctaaatctatctaatctaatta 33498358 Query: 347 cttcgttccctaatttcattcaagagatcctgaggaaaagaattgggtttccaccgagct 406 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 33498359 cttcgttccctaatttcatttaagagatcctgaggaaaagaattgggtttccaccgagct 33498418 Query: 407 gaaacaatatgcggatggttctagtaaaccaaaactatcgttttttagctatttggcttc 466 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 33498419 gaaacaatatgctgatggttctagtaaaccaaaactaccgttttttagctatttggcttc 33498478 Query: 467 cttatcc---tttaacaaaagaagatttagttacgattggaa 505 | | ||| |||||||||||||||||||||||||||||||| Sbjct: 33498479 catttccttttttaacaaaagaagatttagttacgattggaa 33498520 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 356 ctaatttcattcaagagatcc 376 ||||||||||||||||||||| Sbjct: 23726614 ctaatttcattcaagagatcc 23726594
>dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0010K01 Length = 144404 Score = 918 bits (463), Expect = 0.0 Identities = 597/637 (93%), Gaps = 6/637 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63789 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 63848 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 63849 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 63908 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 63909 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 63968 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 63969 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 64028 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 64029 aatt-tgcctaaatctatctaatctaattacttcgttccctaatttcatttaagagatcc 64087 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 64088 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 64147 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 64148 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagaagatttag 64207 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| | Sbjct: 64208 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatatttaaa 64267 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 64268 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcca 64326 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 64327 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 64386 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 64387 catattcttcctcaatatgctattgagagaaaaagga 64423
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 910 bits (459), Expect = 0.0 Identities = 596/637 (93%), Gaps = 6/637 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11212 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 11271 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 11272 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 11331 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 11332 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 11391 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 11392 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 11451 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| |||||| |||||||||||||||| ||||||||| Sbjct: 11452 aatt-tgcctaaatctatctaatctaattactttgttccctaatttcatttaagagatcc 11510 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 11511 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 11570 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| ||||||||||| |||||||| Sbjct: 11571 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagtagatttag 11630 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | Sbjct: 11631 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatattttaa 11690 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 11691 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcca 11749 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 11750 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 11809 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 11810 catattcttcctcaatatgctattgagagaaaaagga 11846 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 84 atggagcgggtagcgggaatcgaacccgca 113 ||||||||||||| |||||||||||||||| Sbjct: 34319 atggagcgggtagtgggaatcgaacccgca 34348
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 910 bits (459), Expect = 0.0 Identities = 596/637 (93%), Gaps = 6/637 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86145 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 86204 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 86205 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 86264 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 86265 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 86324 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 86325 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 86384 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| |||||| |||||||||||||||| ||||||||| Sbjct: 86385 aatt-tgcctaaatctatctaatctaattactttgttccctaatttcatttaagagatcc 86443 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 86444 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 86503 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| ||||||||||| |||||||| Sbjct: 86504 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagtagatttag 86563 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | Sbjct: 86564 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatattttaa 86623 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 86624 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcca 86682 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 86683 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 86742 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 86743 catattcttcctcaatatgctattgagagaaaaagga 86779 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 84 atggagcgggtagcgggaatcgaacccgca 113 ||||||||||||| |||||||||||||||| Sbjct: 109252 atggagcgggtagtgggaatcgaacccgca 109281
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 910 bits (459), Expect = 0.0 Identities = 596/637 (93%), Gaps = 6/637 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10304820 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 10304879 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10304880 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 10304939 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 10304940 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 10304999 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 10305000 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 10305059 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| |||||| |||||||||||||||| ||||||||| Sbjct: 10305060 aatt-tgcctaaatctatctaatctaattactttgttccctaatttcatttaagagatcc 10305118 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10305119 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 10305178 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| ||||||||||| |||||||| Sbjct: 10305179 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagtagatttag 10305238 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | Sbjct: 10305239 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatattttaa 10305298 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 10305299 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcca 10305357 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 10305358 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 10305417 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 10305418 catattcttcctcaatatgctattgagagaaaaagga 10305454 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 84 atggagcgggtagcgggaatcgaacccgca 113 ||||||||||||| |||||||||||||||| Sbjct: 19958529 atggagcgggtagtgggaatcgaacccgca 19958500 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 84 atggagcgggtagcgggaatcgaacccgca 113 ||||||||||||| |||||||||||||||| Sbjct: 10327927 atggagcgggtagtgggaatcgaacccgca 10327956 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 caaagctctctgctttctagatgat 295 |||||||| |||||||||||||||| Sbjct: 21068700 caaagctcgctgctttctagatgat 21068724
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 910 bits (459), Expect = 0.0 Identities = 596/637 (93%), Gaps = 6/637 (0%) Strand = Plus / Minus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14383325 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 14383266 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 14383265 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 14383206 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 14383205 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 14383146 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 14383145 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 14383086 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 14383085 aatt-tgcctaaatctatctaatctaattacttcgttccctaatttcatttaagagatcc 14383027 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 14383026 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggctctagtaaacc 14382967 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 14382966 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagaagatttag 14382907 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| | Sbjct: 14382906 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatatttaaa 14382847 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 14382846 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcga 14382788 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 14382787 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 14382728 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 14382727 catattcttcctcaatatgctattgagagaaaaagga 14382691 Score = 149 bits (75), Expect = 1e-32 Identities = 125/139 (89%), Gaps = 2/139 (1%) Strand = Plus / Plus Query: 535 tcctttactcatattttcaaaattggaatacttaaatccaatgcaaaattatgcttcgcg 594 ||||||||| ||||||| ||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 12182901 tcctttactgatattttaaaaattggaatccttaa-tcgaatgcaaaattatgcttcgcg 12182959 Query: 595 actctgtactcata-tcataatccaatttttattttggatgcaatttaaattagtttttg 653 |||||||||||||| || |||| ||||| | ||||||||||||||| ||||||| || | Sbjct: 12182960 actctgtactcataatccaaatctaatttgttttttggatgcaattttaattagtcttcg 12183019 Query: 654 ggtacaaatcgccagaatg 672 ||||||||||||||||||| Sbjct: 12183020 ggtacaaatcgccagaatg 12183038
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 910 bits (459), Expect = 0.0 Identities = 596/637 (93%), Gaps = 6/637 (0%) Strand = Plus / Minus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105247 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 105188 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 105187 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 105128 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 105127 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 105068 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 105067 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 105008 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 105007 aatt-tgcctaaatctatctaatctaattacttcgttccctaatttcatttaagagatcc 104949 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 104948 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggctctagtaaacc 104889 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 104888 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagaagatttag 104829 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| | Sbjct: 104828 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatatttaaa 104769 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104768 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcga 104710 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 104709 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 104650 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 104649 catattcttcctcaatatgctattgagagaaaaagga 104613
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 910 bits (459), Expect = 0.0 Identities = 596/637 (93%), Gaps = 6/637 (0%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10310859 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 10310918 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10310919 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 10310978 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 10310979 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 10311038 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 10311039 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 10311098 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| |||||| |||||||||||||||| ||||||||| Sbjct: 10311099 aatt-tgcctaaatctatctaatctaattactttgttccctaatttcatttaagagatcc 10311157 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10311158 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 10311217 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| ||||||||||| |||||||| Sbjct: 10311218 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagtagatttag 10311277 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | Sbjct: 10311278 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatattttaa 10311337 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 10311338 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcca 10311396 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 10311397 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 10311456 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 10311457 catattcttcctcaatatgctattgagagaaaaagga 10311493 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 84 atggagcgggtagcgggaatcgaacccgca 113 ||||||||||||| |||||||||||||||| Sbjct: 19969805 atggagcgggtagtgggaatcgaacccgca 19969776 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 84 atggagcgggtagcgggaatcgaacccgca 113 ||||||||||||| |||||||||||||||| Sbjct: 10333966 atggagcgggtagtgggaatcgaacccgca 10333995 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 caaagctctctgctttctagatgat 295 |||||||| |||||||||||||||| Sbjct: 21079964 caaagctcgctgctttctagatgat 21079988
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 902 bits (455), Expect = 0.0 Identities = 596/637 (93%), Gaps = 7/637 (1%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12992 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 13051 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 13052 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 13111 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 13112 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 13171 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 13172 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 13231 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 13232 aatt-tgcctaaatctatctaatctaattacttcgttccctaatttcatttaagagatcc 13290 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 13291 tgaggaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 13350 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 13351 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagaagatttag 13410 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| | Sbjct: 13411 ttacgattggaaataaatttttttgtatcttcatccatagatcctttactcatatttaaa 13470 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| |||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 13471 aaattggaatcctt-aatccaatgcaaaattat-cttcgcgactctgtactcataatcca 13528 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 13529 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 13588 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 13589 catattcttcctcaatatgctattgagagaaaaagga 13625 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 84 atggagcgggtagcgggaatcgaacccgca 113 ||||||||||||| |||||||||||||||| Sbjct: 36070 atggagcgggtagtgggaatcgaacccgca 36099
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 902 bits (455), Expect = 0.0 Identities = 596/637 (93%), Gaps = 7/637 (1%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110202 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 110261 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 110262 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 110321 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 110322 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 110381 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 110382 tgtctgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagataga 110441 Query: 317 aattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatcc 376 |||| | ||||||| |||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 110442 aatt-tgcctaaatctatctaatctaattacttcgttccctaatttcatttaagagatcc 110500 Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110501 tga-gaaaagaattgggtttccaccgagctgaaacaatatgctgatggttctagtaaacc 110559 Query: 437 aaaactatcgttttttagctatttggcttccttatcc---tttaacaaaagaagatttag 493 ||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 110560 aaaactaccgttttttagctatttggcttccatttccttttttaacaaaagaagatttag 110619 Query: 494 ttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatattttca 553 |||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| | Sbjct: 110620 ttacgattggaaataaatttttttgtatctttatccatagatcctttactcatattttaa 110679 Query: 554 aaattggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcat-atcat 612 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110680 aaattggaatcctt-aatccaatgcaaaattatgcttcgcgactctgtactcataatcca 110738 Query: 613 aatccaatttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatg 672 ||||| |||| | ||||||||||||||| ||||||| |||||||||||||||| | |||| Sbjct: 110739 aatcctatttgttttttggatgcaatttcaattagtctttgggtacaaatcgcgaaaatg 110798 Query: 673 tatattcttcctcaatatgctattgagaggaaaagga 709 |||||||||||||||||||||||||||| ||||||| Sbjct: 110799 catattcttcctcaatatgctattgagagaaaaagga 110835 Score = 500 bits (252), Expect = e-138 Identities = 321/342 (93%), Gaps = 4/342 (1%) Strand = Plus / Plus Query: 167 cgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatggatatt 226 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 43377 cgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgggtatt 43436 Query: 227 ctcaccacttaacatctatgtcagcttttctatttgaatggaaccaaagctctctgcttt 286 |||||||||||||||||| |||||||||| | | ||||||||||||| |||||||||||| Sbjct: 43437 ctcaccacttaacatctaagtcagcttttttgtctgaatggaaccaaggctctctgcttt 43496 Query: 287 ctagatgatccttatagagtaggagatagaaattctatctaaatccatctaatctactta 346 ||||||||||| || ||||||||||||||||||| | ||||||| |||||||||| ||| Sbjct: 43497 ctagatgatccctaaagagtaggagatagaaatt-tgcctaaatctatctaatctaatta 43555 Query: 347 cttcgttccctaatttcattcaagagatcctgaggaaaagaattgggtttccaccgagct 406 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 43556 cttcgttccctaatttcatttaagagatcctgaggaaaagaattgggtttccaccgagct 43615 Query: 407 gaaacaatatgcggatggttctagtaaaccaaaactatcgttttttagctatttggcttc 466 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 43616 gaaacaatatgctgatggttctagtaaaccaaaactaccgttttttagctatttggcttc 43675 Query: 467 cttatcc---tttaacaaaagaagatttagttacgattggaa 505 | | ||| |||||||||||||||||||||||||||||||| Sbjct: 43676 catttccttttttaacaaaagaagatttagttacgattggaa 43717
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 724 bits (365), Expect = 0.0 Identities = 456/483 (94%), Gaps = 10/483 (2%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75265 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 75324 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 75325 ttatagtcgacgttggttgattatttttgacgtctctaattcaaaaccgaacatgaaatt 75384 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75385 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 75444 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 75445 tgtctgaatggaaccaaagctctccgctttctagatgatccctatagagtaggagataga 75504 Query: 317 aattctatctaaat--ccatctaatctacttacttcgttccctaatttcattcaagagat 374 |||||| |||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 75505 aattctc-ctaaatatctatctaatctacttacttcgttccctaatttcattcaagagat 75563 Query: 375 cctgaggaaaagaattgggtttccaccgagctgaaacaatatg-----cggatggttcta 429 ||||||||||||| |||||||||||||||||||||||||||| | |||||||||| Sbjct: 75564 cctgaggaaaagagttgggtttccaccgagctgaaacaatataatatactgatggttcta 75623 Query: 430 gtaaaccaaaactatcgttttttagctatttggcttccttatcct--ttaacaaaagaag 487 |||||||||||| ||||||||||||||||| ||||||| | |||| ||||||||||| Sbjct: 75624 gtaaaccaaaaccatcgttttttagctattgggcttccatttcctacaaaacaaaagaag 75683 Query: 488 atttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcata 547 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 75684 atttagttacgattggaaataaacttttttgtatcttcatccatagatcctttactcata 75743 Query: 548 ttt 550 ||| Sbjct: 75744 ttt 75746 Score = 145 bits (73), Expect = 2e-31 Identities = 134/153 (87%), Gaps = 6/153 (3%) Strand = Plus / Plus Query: 559 ggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcatatcataatcca 618 ||||||||||| |||||||||||||| |||||||||||| |||||| || ||| | Sbjct: 75767 ggaatacttaa-tccaatgcaaaattttgcttcgcgactacgtactccta-----atcga 75820 Query: 619 atttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatgtatatt 678 |||| |||||| ||||||| || ||||||| ||||| ||| |||||| |||||||||||| Sbjct: 75821 atttgtattttagatgcaaattcaattagtctttggatactaatcgcgagaatgtatatt 75880 Query: 679 cttcctcaatatgctattgagaggaaaaggatt 711 ||||||||||||||||||||||||||||||||| Sbjct: 75881 cttcctcaatatgctattgagaggaaaaggatt 75913
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 724 bits (365), Expect = 0.0 Identities = 456/483 (94%), Gaps = 10/483 (2%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13638 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 13697 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 13698 ttatagtcgacgttggttgattatttttgacgtctctaattcaaaaccgaacatgaaatt 13757 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13758 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 13817 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 13818 tgtctgaatggaaccaaagctctccgctttctagatgatccctatagagtaggagataga 13877 Query: 317 aattctatctaaat--ccatctaatctacttacttcgttccctaatttcattcaagagat 374 |||||| |||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 13878 aattctc-ctaaatatctatctaatctacttacttcgttccctaatttcattcaagagat 13936 Query: 375 cctgaggaaaagaattgggtttccaccgagctgaaacaatatg-----cggatggttcta 429 ||||||||||||| |||||||||||||||||||||||||||| | |||||||||| Sbjct: 13937 cctgaggaaaagagttgggtttccaccgagctgaaacaatataatatactgatggttcta 13996 Query: 430 gtaaaccaaaactatcgttttttagctatttggcttccttatcct--ttaacaaaagaag 487 |||||||||||| ||||||||||||||||| ||||||| | |||| ||||||||||| Sbjct: 13997 gtaaaccaaaaccatcgttttttagctattgggcttccatttcctacaaaacaaaagaag 14056 Query: 488 atttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcata 547 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 14057 atttagttacgattggaaataaacttttttgtatcttcatccatagatcctttactcata 14116 Query: 548 ttt 550 ||| Sbjct: 14117 ttt 14119 Score = 145 bits (73), Expect = 2e-31 Identities = 134/153 (87%), Gaps = 6/153 (3%) Strand = Plus / Plus Query: 559 ggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcatatcataatcca 618 ||||||||||| |||||||||||||| |||||||||||| |||||| || ||| | Sbjct: 14140 ggaatacttaa-tccaatgcaaaattttgcttcgcgactacgtactccta-----atcga 14193 Query: 619 atttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatgtatatt 678 |||| |||||| ||||||| || ||||||| ||||| ||| |||||| |||||||||||| Sbjct: 14194 atttgtattttagatgcaaattcaattagtctttggatactaatcgcgagaatgtatatt 14253 Query: 679 cttcctcaatatgctattgagaggaaaaggatt 711 ||||||||||||||||||||||||||||||||| Sbjct: 14254 cttcctcaatatgctattgagaggaaaaggatt 14286
>gb|AY941128.1| Paspalum haumanii tRNA-Gly (trnG) gene, intron; chloroplast Length = 604 Score = 722 bits (364), Expect = 0.0 Identities = 513/560 (91%), Gaps = 17/560 (3%) Strand = Plus / Plus Query: 162 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 60 Query: 222 atattctcaccacttaacatctatgtcagcttttctatttgaatggaaccaaagctctct 281 ||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 61 atattctcaccgcttaacatctatgtcagcttttctgtctgaatggaaccaaagctctct 120 Query: 282 gctttctagatgatccttatagagtaggagatagaaattctatctaaat--ccatctaat 339 |||||||||||||||| |||||| ||||||||||||||| | |||||| | ||||||| Sbjct: 121 gctttctagatgatccctatagaataggagatagaaattatc-ctaaatatctatctaat 179 Query: 340 ctacttacttcgttccctaatttcattcaagagatcctgaggaaaagaattgggtttcca 399 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 180 ctacttacttcgttccctaatttcattcaagagatcctgaggagaagaattgggtttccg 239 Query: 400 ccgagctgaaacaatatgcggatggttctagtaaaccaaaactatcgttttttagctatt 459 ||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||| Sbjct: 240 ccgagctgaaacaatatactgatggttctagtaaaccaaaacccttgttttttagctatt 299 Query: 460 tggcttccttatccttt--------aacaaaagaagatttagttacgattggaaatcaac 511 ||||||| | |||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 300 gggcttccatttcctttttaaacaaaacaaaagaagatttagttacgattggaaataaac 359 Query: 512 ttttttgtatcttcatccatagatcctttactcatattttcaaaattggaatacttaaat 571 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 360 ttttttgtatcttcatccatagatcctttactcatatttttaaaatcggaatactt-aat 418 Query: 572 ccaatgcaaaattatgcttcgcgactctgtactcatatcataatccaatttttattttgg 631 ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| Sbjct: 419 ccaatgcaaaattatgcttcgcgactccgtac-----tcataatcgaatttttattttgg 473 Query: 632 atgcaatttaaattagtttttgggtacaaatcgccagaatgtatattcttcctcaatatg 691 |||||| || ||||| | ||||| ||| |||||| ||||||||||||||||||||||||| Sbjct: 474 atgcaaattcaattattctttggatactaatcgcgagaatgtatattcttcctcaatatg 533 Query: 692 ctattgagaggaaaaggatt 711 |||||||||||||||||||| Sbjct: 534 ctattgagaggaaaaggatt 553
>gb|AY941133.1| Paspalum quarinii tRNA-Gly (trnG) gene, intron; chloroplast Length = 604 Score = 714 bits (360), Expect = 0.0 Identities = 512/560 (91%), Gaps = 17/560 (3%) Strand = Plus / Plus Query: 162 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 60 Query: 222 atattctcaccacttaacatctatgtcagcttttctatttgaatggaaccaaagctctct 281 ||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 61 atattctcaccgcttaacatctatgtcagcttttctgtctgaatggaaccaaagctctct 120 Query: 282 gctttctagatgatccttatagagtaggagatagaaattctatctaaat--ccatctaat 339 |||||||||||||||| |||||| ||||||||||||||| | |||||| | ||||||| Sbjct: 121 gctttctagatgatccctatagaataggagatagaaattatc-ctaaatatctatctaat 179 Query: 340 ctacttacttcgttccctaatttcattcaagagatcctgaggaaaagaattgggtttcca 399 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 180 ctacttacttcgttccctaatttcattcaagagatcctgaggagaagaattgggtttccg 239 Query: 400 ccgagctgaaacaatatgcggatggttctagtaaaccaaaactatcgttttttagctatt 459 ||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||| Sbjct: 240 ccgagctgaaacaatatactgatggttctagtaaaccaaaacccttgttttttagctatt 299 Query: 460 tggcttccttatccttt--------aacaaaagaagatttagttacgattggaaatcaac 511 ||||||| | |||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 300 gggcttccatttcctttttaaacaaaacaaaagaagatttagttacgattggaaataaac 359 Query: 512 ttttttgtatcttcatccatagatcctttactcatattttcaaaattggaatacttaaat 571 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 360 ttttttgtatcttcatccatagatcctttactcatattttaaaaatcggaatactt-aat 418 Query: 572 ccaatgcaaaattatgcttcgcgactctgtactcatatcataatccaatttttattttgg 631 ||||||||||||||||||||||||||| |||| |||||||| ||||| |||||||| Sbjct: 419 ccaatgcaaaattatgcttcgcgactccgtac-----tcataatcgaatttgtattttgg 473 Query: 632 atgcaatttaaattagtttttgggtacaaatcgccagaatgtatattcttcctcaatatg 691 |||||| || ||||| | ||||| ||| |||||| ||||||||||||||||||||||||| Sbjct: 474 atgcaaattcaattattctttggatactaatcgcgagaatgtatattcttcctcaatatg 533 Query: 692 ctattgagaggaaaaggatt 711 |||||||||||||||||||| Sbjct: 534 ctattgagaggaaaaggatt 553
>gb|AY941131.1| Paspalum quadrifarium tRNA-Gly (trnG) gene, intron; chloroplast Length = 604 Score = 714 bits (360), Expect = 0.0 Identities = 512/560 (91%), Gaps = 17/560 (3%) Strand = Plus / Plus Query: 162 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 60 Query: 222 atattctcaccacttaacatctatgtcagcttttctatttgaatggaaccaaagctctct 281 ||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 61 atattctcaccgcttaacatctatgtcagcttttctgtctgaatggaaccaaagctctct 120 Query: 282 gctttctagatgatccttatagagtaggagatagaaattctatctaaat--ccatctaat 339 |||||||||||||||| |||||| ||||||||||||||| | |||||| | ||||||| Sbjct: 121 gctttctagatgatccctatagaataggagatagaaattatc-ctaaatatctatctaat 179 Query: 340 ctacttacttcgttccctaatttcattcaagagatcctgaggaaaagaattgggtttcca 399 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 180 ctacttacttcgttccctaatttcattcaagagatcctgaggagaagaattgggtttccg 239 Query: 400 ccgagctgaaacaatatgcggatggttctagtaaaccaaaactatcgttttttagctatt 459 ||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||| Sbjct: 240 ccgagctgaaacaatatactgatggttctagtaaaccaaaacccttgttttttagctatt 299 Query: 460 tggcttccttatccttt--------aacaaaagaagatttagttacgattggaaatcaac 511 ||||||| | |||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 300 gggcttccatttcctttttaaacaaaacaaaagaagatttagttacgattggaaataaac 359 Query: 512 ttttttgtatcttcatccatagatcctttactcatattttcaaaattggaatacttaaat 571 |||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||| Sbjct: 360 ttttttgtatcttcatccatagatcctttactcatattttttaaatcggaatactt-aat 418 Query: 572 ccaatgcaaaattatgcttcgcgactctgtactcatatcataatccaatttttattttgg 631 ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| Sbjct: 419 ccaatgcaaaattatgcttcgcgactccgtac-----tcataatcgaatttttattttgg 473 Query: 632 atgcaatttaaattagtttttgggtacaaatcgccagaatgtatattcttcctcaatatg 691 |||||| || ||||| | ||||| ||| |||||| ||||||||||||||||||||||||| Sbjct: 474 atgcaaattcaattattctttggatactaatcgcgagaatgtatattcttcctcaatatg 533 Query: 692 ctattgagaggaaaaggatt 711 |||||||||||||||||||| Sbjct: 534 ctattgagaggaaaaggatt 553
>gb|AY941129.1| Paspalum intermedium tRNA-Gly (trnG) gene, intron; chloroplast Length = 604 Score = 714 bits (360), Expect = 0.0 Identities = 512/560 (91%), Gaps = 17/560 (3%) Strand = Plus / Plus Query: 162 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 60 Query: 222 atattctcaccacttaacatctatgtcagcttttctatttgaatggaaccaaagctctct 281 ||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 61 atattctcaccgcttaacatctatgtcagcttttctgtctgaatggaaccaaagctctct 120 Query: 282 gctttctagatgatccttatagagtaggagatagaaattctatctaaat--ccatctaat 339 |||||||||||||||| |||||| ||||||||||||||| | |||||| | ||||||| Sbjct: 121 gctttctagatgatccctatagaataggagatagaaattatc-ctaaatatctatctaat 179 Query: 340 ctacttacttcgttccctaatttcattcaagagatcctgaggaaaagaattgggtttcca 399 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 180 ctacttacttcgttccctaatttcattcaagagatcctgaggagaagaattgggtttccg 239 Query: 400 ccgagctgaaacaatatgcggatggttctagtaaaccaaaactatcgttttttagctatt 459 ||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||| Sbjct: 240 ccgagctgaaacaatatactgatggttctagtaaaccaaaacccttgttttttagctatt 299 Query: 460 tggcttccttatccttt--------aacaaaagaagatttagttacgattggaaatcaac 511 ||||||| | |||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 300 gggcttccatttcctttttaaacaaaacaaaagaagatttagttacgattggaaataaac 359 Query: 512 ttttttgtatcttcatccatagatcctttactcatattttcaaaattggaatacttaaat 571 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 360 ttttttgtatcttcatccatagatcctttactcatattttaaaaatcggaatactt-aat 418 Query: 572 ccaatgcaaaattatgcttcgcgactctgtactcatatcataatccaatttttattttgg 631 ||||||||||||||||||||||||||| |||| |||||||| ||||| |||||||| Sbjct: 419 ccaatgcaaaattatgcttcgcgactccgtac-----tcataatcgaatttgtattttgg 473 Query: 632 atgcaatttaaattagtttttgggtacaaatcgccagaatgtatattcttcctcaatatg 691 |||||| || ||||| | ||||| ||| |||||| ||||||||||||||||||||||||| Sbjct: 474 atgcaaattcaattattctttggatactaatcgcgagaatgtatattcttcctcaatatg 533 Query: 692 ctattgagaggaaaaggatt 711 |||||||||||||||||||| Sbjct: 534 ctattgagaggaaaaggatt 553
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 708 bits (357), Expect = 0.0 Identities = 454/483 (93%), Gaps = 10/483 (2%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13234 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 13293 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 13294 ttatagtcgacgttggttgattatttttgacgtctctaattcaaaaccgaacatgaaatt 13353 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13354 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 13413 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||||| Sbjct: 13414 tgtctgaatggaaccaaagctctccgctttctagatgatccctatagaataggagataga 13473 Query: 317 aattctatctaaat--ccatctaatctacttacttcgttccctaatttcattcaagagat 374 |||||| |||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 13474 aattctc-ctaaatatctatctaatctacttacttcgttccctaatttcattcaagagat 13532 Query: 375 cctgaggaaaagaattgggtttccaccgagctgaaacaatatg-----cggatggttcta 429 ||||||||||||| |||||||||||||||||||||||||||| | |||||||||| Sbjct: 13533 cctgaggaaaagagttgggtttccaccgagctgaaacaatataatatactgatggttcta 13592 Query: 430 gtaaaccaaaactatcgttttttagctatttggcttccttatcct--ttaacaaaagaag 487 |||||||||||| ||||||||||||||||| ||||||| | |||| ||||||||||| Sbjct: 13593 gtaaaccaaaaccatcgttttttagctattgggcttccatttcctacaaaacaaaagaag 13652 Query: 488 atttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcata 547 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 13653 atttagttacgattggaaataaccttttttgtatcttcatccatagatcctttactcata 13712 Query: 548 ttt 550 ||| Sbjct: 13713 ttt 13715 Score = 137 bits (69), Expect = 6e-29 Identities = 133/153 (86%), Gaps = 6/153 (3%) Strand = Plus / Plus Query: 559 ggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcatatcataatcca 618 ||||||||||| |||||||||||||||| ||||||||| |||| |||||||| | Sbjct: 13736 ggaatacttaa-tccaatgcaaaattatcgttcgcgactacgtac-----tcataatcga 13789 Query: 619 atttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatgtatatt 678 |||| |||||| ||||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 13790 atttgtattttagatgcaaattcaattagtctttggatactaatcgggagaatgtatatt 13849 Query: 679 cttcctcaatatgctattgagaggaaaaggatt 711 ||||||||||||||||||||||||||||||||| Sbjct: 13850 cttcctcaatatgctattgagaggaaaaggatt 13882
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 708 bits (357), Expect = 0.0 Identities = 454/483 (93%), Gaps = 10/483 (2%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13228 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 13287 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 13288 ttatagtcgacgttggttgattatttttgacgtctctaattcaaaaccgaacatgaaatt 13347 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13348 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 13407 Query: 257 tatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagataga 316 | | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||||| Sbjct: 13408 tgtctgaatggaaccaaagctctccgctttctagatgatccctatagaataggagataga 13467 Query: 317 aattctatctaaat--ccatctaatctacttacttcgttccctaatttcattcaagagat 374 |||||| |||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 13468 aattctc-ctaaatatctatctaatctacttacttcgttccctaatttcattcaagagat 13526 Query: 375 cctgaggaaaagaattgggtttccaccgagctgaaacaatatg-----cggatggttcta 429 ||||||||||||| |||||||||||||||||||||||||||| | |||||||||| Sbjct: 13527 cctgaggaaaagagttgggtttccaccgagctgaaacaatataatatactgatggttcta 13586 Query: 430 gtaaaccaaaactatcgttttttagctatttggcttccttatcct--ttaacaaaagaag 487 |||||||||||| ||||||||||||||||| ||||||| | |||| ||||||||||| Sbjct: 13587 gtaaaccaaaaccatcgttttttagctattgggcttccatttcctacaaaacaaaagaag 13646 Query: 488 atttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcata 547 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 13647 atttagttacgattggaaataaccttttttgtatcttcatccatagatcctttactcata 13706 Query: 548 ttt 550 ||| Sbjct: 13707 ttt 13709 Score = 153 bits (77), Expect = 9e-34 Identities = 135/153 (88%), Gaps = 6/153 (3%) Strand = Plus / Plus Query: 559 ggaatacttaaatccaatgcaaaattatgcttcgcgactctgtactcatatcataatcca 618 ||||||||||| ||||||||||||||||||||||||||| |||| |||||||| | Sbjct: 13730 ggaatacttaa-tccaatgcaaaattatgcttcgcgactacgtac-----tcataatcga 13783 Query: 619 atttttattttggatgcaatttaaattagtttttgggtacaaatcgccagaatgtatatt 678 |||| |||||| ||||||| || ||||||| ||||| ||| ||||| |||||||||||| Sbjct: 13784 atttgtattttagatgcaaattcaattagtctttggatactaatcgggagaatgtatatt 13843 Query: 679 cttcctcaatatgctattgagaggaaaaggatt 711 ||||||||||||||||||||||||||||||||| Sbjct: 13844 cttcctcaatatgctattgagaggaaaaggatt 13876
>gb|AY941135.1| Paspalum quadrifarium tRNA-Gly (trnG) gene, intron; chloroplast Length = 604 Score = 706 bits (356), Expect = 0.0 Identities = 511/560 (91%), Gaps = 17/560 (3%) Strand = Plus / Plus Query: 162 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 60 Query: 222 atattctcaccacttaacatctatgtcagcttttctatttgaatggaaccaaagctctct 281 ||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 61 atattctcaccgcttaacatctatgtcagcttttctgtctgaatggaaccaaagctctct 120 Query: 282 gctttctagatgatccttatagagtaggagatagaaattctatctaaat--ccatctaat 339 |||||||||||||||| |||||| ||||||||||||||| | |||||| | ||||||| Sbjct: 121 gctttctagatgatccctatagaataggagatagaaattatc-ctaaatatctatctaat 179 Query: 340 ctacttacttcgttccctaatttcattcaagagatcctgaggaaaagaattgggtttcca 399 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 180 ctacttacttcgttccctaatttcattcaagagatcctgaggagaagaattgggtttccg 239 Query: 400 ccgagctgaaacaatatgcggatggttctagtaaaccaaaactatcgttttttagctatt 459 ||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||| Sbjct: 240 ccgagctgaaacaatatactgatggttctagtaaaccaaaacccttgttttttagctatt 299 Query: 460 tggcttccttatccttt--------aacaaaagaagatttagttacgattggaaatcaac 511 ||||||| | |||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 300 gggcttccatttcctttttaaacaaaacaaaagaagatttagttacgattggaaataaac 359 Query: 512 ttttttgtatcttcatccatagatcctttactcatattttcaaaattggaatacttaaat 571 ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 360 ttttttgtatcttcatccatagatcctttactcatatttaaaaaatcggaatactt-aat 418 Query: 572 ccaatgcaaaattatgcttcgcgactctgtactcatatcataatccaatttttattttgg 631 ||||||||||||||||||||||||||| |||| |||||||| ||||| |||||||| Sbjct: 419 ccaatgcaaaattatgcttcgcgactccgtac-----tcataatcgaatttgtattttgg 473 Query: 632 atgcaatttaaattagtttttgggtacaaatcgccagaatgtatattcttcctcaatatg 691 |||||| || ||||| | ||||| ||| |||||| ||||||||||||||||||||||||| Sbjct: 474 atgcaaattcaattattctttggatactaatcgcgagaatgtatattcttcctcaatatg 533 Query: 692 ctattgagaggaaaaggatt 711 |||||||||||||||||||| Sbjct: 534 ctattgagaggaaaaggatt 553
>gb|AY941134.1| Paspalum exaltatum tRNA-Gly (trnG) gene, intron; chloroplast Length = 604 Score = 706 bits (356), Expect = 0.0 Identities = 511/560 (91%), Gaps = 17/560 (3%) Strand = Plus / Plus Query: 162 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 60 Query: 222 atattctcaccacttaacatctatgtcagcttttctatttgaatggaaccaaagctctct 281 ||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 61 atattctcaccgcttaacatctatgtcagcttttctgtctgaatggaaccaaagctctct 120 Query: 282 gctttctagatgatccttatagagtaggagatagaaattctatctaaat--ccatctaat 339 |||||||||||||||| |||||| ||||||||||||||| | |||||| | ||||||| Sbjct: 121 gctttctagatgatccctatagaataggagatagaaattatc-ctaaatatctatctaat 179 Query: 340 ctacttacttcgttccctaatttcattcaagagatcctgaggaaaagaattgggtttcca 399 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 180 ctacttacttcgttccctaatttcattcaagagatcctgaggagaagaattgggtttccg 239 Query: 400 ccgagctgaaacaatatgcggatggttctagtaaaccaaaactatcgttttttagctatt 459 ||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||| Sbjct: 240 ccgagctgaaacaatatactgatggttctagtaaaccaaaacccttgttttttagctatt 299 Query: 460 tggcttccttatccttt--------aacaaaagaagatttagttacgattggaaatcaac 511 ||||||| | |||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 300 gggcttccatttcctttttaaacaaaacaaaagaagatttagttacgattggaaataaac 359 Query: 512 ttttttgtatcttcatccatagatcctttactcatattttcaaaattggaatacttaaat 571 ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 360 ttttttgtatcttcatccatagatcctttactcatatttaaaaaatcggaatactt-aat 418 Query: 572 ccaatgcaaaattatgcttcgcgactctgtactcatatcataatccaatttttattttgg 631 ||||||||||||||||||||||||||| |||| |||||||| ||||| |||||||| Sbjct: 419 ccaatgcaaaattatgcttcgcgactccgtac-----tcataatcgaatttgtattttgg 473 Query: 632 atgcaatttaaattagtttttgggtacaaatcgccagaatgtatattcttcctcaatatg 691 |||||| || ||||| | ||||| ||| |||||| ||||||||||||||||||||||||| Sbjct: 474 atgcaaattcaattattctttggatactaatcgcgagaatgtatattcttcctcaatatg 533 Query: 692 ctattgagaggaaaaggatt 711 |||||||||||||||||||| Sbjct: 534 ctattgagaggaaaaggatt 553
>gb|AY941132.1| Axonopus rosengurttii tRNA-Gly (trnG) gene, intron; chloroplast Length = 603 Score = 694 bits (350), Expect = 0.0 Identities = 511/561 (91%), Gaps = 19/561 (3%) Strand = Plus / Plus Query: 162 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 60 Query: 222 atattctcaccacttaacatctatgtcagcttttctatttgaatggaaccaaagctctct 281 ||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 61 atattctcaccgcttaacatctatgtcagcttttctgtctgaatggaaccaaagctctct 120 Query: 282 gctttctagatgatccttatagagtaggagatagaaattctatctaa--atccatctaat 339 |||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||| Sbjct: 121 gctttctagatgatccctatagagtaggagatagaaattct-cctaaatatctatctaat 179 Query: 340 ctacttacttcgttccctaatttcattcaagagatcctgaggaaaagaattgggtttcca 399 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 ccacttacttcgttccctaatttcattcaagagatcctgaggaaaagaattgggtttccg 239 Query: 400 ccgagctgaaacaatatgcggatggttctagtaaaccaaaactatcgttttttagctatt 459 ||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||| Sbjct: 240 ccgagctgaaacaatatactgatggttctagtaaaccaaaaccctcgttttttagctatt 299 Query: 460 tggcttccttatccttt--------aacaaaagaagatttagttacgattggaaatcaac 511 ||||||| | |||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 300 gggcttccatttcctttttaaacaaaacaaaagaagatttagttacgattggaaataaac 359 Query: 512 ttttttgtatcttcatccatagatcctttactcatattttcaaaattggaatacttaaat 571 ||||||||||||||||||||||||||||||||| ||||| ||| ||||||||| ||| Sbjct: 360 ttttttgtatcttcatccatagatcctttactcgtatttattcaatcggaatactt-aat 418 Query: 572 ccaatgcaaaattatgcttcgcgactctgtactcata-tcataatccaatttttattttg 630 |||| ||||||||||||||||||||| ||||| |||||||| ||||| ||||||| Sbjct: 419 ccaaagcaaaattatgcttcgcgact------tcatactcataatcgaatttgtattttg 472 Query: 631 gatgcaatttaaattagtttttgggtacaaatcgccagaatgtatattcttcctcaatat 690 ||||||| || ||||||| ||||| ||| |||||| |||||||||||||||||||||||| Sbjct: 473 gatgcaaattcaattagtctttggatactaatcgcgagaatgtatattcttcctcaatat 532 Query: 691 gctattgagaggaaaaggatt 711 ||||||||||||||||||||| Sbjct: 533 gctattgagaggaaaaggatt 553
>gb|AY941130.1| Paspalum rufum tRNA-Gly (trnG) gene, intron; chloroplast Length = 604 Score = 668 bits (337), Expect = 0.0 Identities = 509/561 (90%), Gaps = 19/561 (3%) Strand = Plus / Plus Query: 162 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 60 Query: 222 atattctcaccacttaacatctatgtcagcttttctatttgaatggaaccaaagctctct 281 ||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 61 atattctcaccgcttaacatctatgtcagcttttccgtctgaatggaaccaaagctctct 120 Query: 282 gctttctagatgatccttatagagtaggagatagaaattctatctaaat--ccatctaat 339 |||||||||||||||| |||||| ||||||||||||||| | |||||| | ||||||| Sbjct: 121 gctttctagatgatccctatagaataggagatagaaattatc-ctaaatatctatctaat 179 Query: 340 ctacttacttcgttccctaatttcattcaagagatcctgaggaaaagaattgggtttcca 399 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 180 ctacttacttcgttccctaatttcattcaagagatcctgaggagaagaattgggtttccg 239 Query: 400 ccgagctgaaacaatatgcggatggttctagtaaaccaaaactatcgttttttagctatt 459 ||||||||||||||||| | |||||||||||||||||||||| |||||||| ||||||| Sbjct: 240 ccgagctgaaacaatatactgatggttctagtaaaccaaaaccctcgttttt-agctatt 298 Query: 460 tggcttccttatccttt--------aacaaaagaagatttagttacgattggaaatcaac 511 ||||||| | |||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 299 gggcttccatttcctttttgaacaaaacaaaagaagatttagttacgattggaaataaac 358 Query: 512 ttttttgtatcttcatccatagatcctttactcatattttcaaaattggaatacttaaat 571 ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 359 ttttttgtatcctcatccatagatcctttactcatatttttaaaatcggaatactt-aat 417 Query: 572 ccaatgcaaaattatgcttcgcgactctgtactcatatcataatccaatttttattttgg 631 ||||||||||||||||||||||||||| |||| |||||||| ||||| |||||||| Sbjct: 418 ccaatgcaaaattatgcttcgcgactccgtac-----tcataatcgaatttgtattttgg 472 Query: 632 atg-caatttaaattagtttttgggtacaaatcgccagaatgtatattcttcctcaatat 690 ||| ||| || ||||| | |||| ||| |||||| |||||||||||||||||||||||| Sbjct: 473 atgccaaattcaattattccttggatactaatcgcgagaatgtatattcttcctcaatat 532 Query: 691 gctattgagaggaaaaggatt 711 ||||||||||||||||||||| Sbjct: 533 gctattgagaggaaaaggatt 553
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 664 bits (335), Expect = 0.0 Identities = 455/492 (92%), Gaps = 6/492 (1%) Strand = Plus / Minus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||| | | ||||||||| |||||||||||||||||||||||| || Sbjct: 19332689 atacagaatggagcgggtggtgagaatcgaactcgcatcgttagcttggaaggctagagg 19332630 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 19332629 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 19332570 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagc-tttt 255 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| Sbjct: 19332569 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 19332510 Query: 256 ctatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagatag 315 | | ||||||||||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 19332509 ttgtatgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagatag 19332450 Query: 316 aaattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatc 375 ||||| | ||||||| |||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 19332449 aaatt-tgcctaaatctatctaatctaattacttcgttctctaatttcatttaagagatc 19332391 Query: 376 ctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaac 435 ||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| Sbjct: 19332390 atgaggaaaagaattgggtttccaccaagctgaaacaatatgctgatggttcttgtaaac 19332331 Query: 436 caaaactatcgttttttagctatttggcttccttatcc----tttaacaaaagaagattt 491 |||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||| Sbjct: 19332330 caaaactaccgttttttagctatttggcttccatttcctttttttaacaaaagaagattt 19332271 Query: 492 agttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatatttt 551 ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 19332270 agttatgattggaaataaatttttttgtatcttcatccatagatcctttactcatatttt 19332211 Query: 552 caaaattggaat 563 ||||||||||| Sbjct: 19332210 aaaaattggaat 19332199 Score = 131 bits (66), Expect = 3e-27 Identities = 112/126 (88%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 585 atgcttcgcgactctgtactcata-tcataatccaatttttattttggatgcaatttaaa 643 |||||||| |||||||||||| || || |||||||||| | ||||| ||||||||| || Sbjct: 19332196 atgcttcgtgactctgtactcgtaatccaaatccaatttgttttttgcatgcaatttcaa 19332137 Query: 644 ttagtttttgggtacaaatcgccagaatgtatattcttcctcaatatgctattgagagga 703 ||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||| | Sbjct: 19332136 ttagtctttgggtacaaatcgcgaaaatgcatattcttcctcaatatgctattgagagaa 19332077 Query: 704 aaagga 709 |||||| Sbjct: 19332076 aaagga 19332071
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 664 bits (335), Expect = 0.0 Identities = 455/492 (92%), Gaps = 6/492 (1%) Strand = Plus / Minus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||| | | ||||||||| |||||||||||||||||||||||| || Sbjct: 19258916 atacagaatggagcgggtggtgagaatcgaactcgcatcgttagcttggaaggctagagg 19258857 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 19258856 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 19258797 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagc-tttt 255 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| Sbjct: 19258796 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 19258737 Query: 256 ctatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagatag 315 | | ||||||||||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 19258736 ttgtatgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagatag 19258677 Query: 316 aaattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatc 375 ||||| | ||||||| |||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 19258676 aaatt-tgcctaaatctatctaatctaattacttcgttctctaatttcatttaagagatc 19258618 Query: 376 ctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaac 435 ||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| Sbjct: 19258617 atgaggaaaagaattgggtttccaccaagctgaaacaatatgctgatggttcttgtaaac 19258558 Query: 436 caaaactatcgttttttagctatttggcttccttatcc----tttaacaaaagaagattt 491 |||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||| Sbjct: 19258557 caaaactaccgttttttagctatttggcttccatttcctttttttaacaaaagaagattt 19258498 Query: 492 agttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatatttt 551 ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 19258497 agttatgattggaaataaatttttttgtatcttcatccatagatcctttactcatatttt 19258438 Query: 552 caaaattggaat 563 ||||||||||| Sbjct: 19258437 aaaaattggaat 19258426 Score = 131 bits (66), Expect = 3e-27 Identities = 112/126 (88%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 585 atgcttcgcgactctgtactcata-tcataatccaatttttattttggatgcaatttaaa 643 |||||||| |||||||||||| || || |||||||||| | ||||| ||||||||| || Sbjct: 19258423 atgcttcgtgactctgtactcgtaatccaaatccaatttgttttttgcatgcaatttcaa 19258364 Query: 644 ttagtttttgggtacaaatcgccagaatgtatattcttcctcaatatgctattgagagga 703 ||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||| | Sbjct: 19258363 ttagtctttgggtacaaatcgcgaaaatgcatattcttcctcaatatgctattgagagaa 19258304 Query: 704 aaagga 709 |||||| Sbjct: 19258303 aaagga 19258298
>emb|BX119952.3|CNS09S4V Oryza sativa chromosome 12, . BAC OSJNBb0022A20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131975 Score = 664 bits (335), Expect = 0.0 Identities = 455/492 (92%), Gaps = 6/492 (1%) Strand = Plus / Minus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||| | | ||||||||| |||||||||||||||||||||||| || Sbjct: 38300 atacagaatggagcgggtggtgagaatcgaactcgcatcgttagcttggaaggctagagg 38241 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 38240 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 38181 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagc-tttt 255 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| Sbjct: 38180 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 38121 Query: 256 ctatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagatag 315 | | ||||||||||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 38120 ttgtatgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagatag 38061 Query: 316 aaattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatc 375 ||||| | ||||||| |||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 38060 aaatt-tgcctaaatctatctaatctaattacttcgttctctaatttcatttaagagatc 38002 Query: 376 ctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaac 435 ||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| Sbjct: 38001 atgaggaaaagaattgggtttccaccaagctgaaacaatatgctgatggttcttgtaaac 37942 Query: 436 caaaactatcgttttttagctatttggcttccttatcc----tttaacaaaagaagattt 491 |||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||| Sbjct: 37941 caaaactaccgttttttagctatttggcttccatttcctttttttaacaaaagaagattt 37882 Query: 492 agttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatatttt 551 ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 37881 agttatgattggaaataaatttttttgtatcttcatccatagatcctttactcatatttt 37822 Query: 552 caaaattggaat 563 ||||||||||| Sbjct: 37821 aaaaattggaat 37810 Score = 131 bits (66), Expect = 3e-27 Identities = 112/126 (88%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 585 atgcttcgcgactctgtactcata-tcataatccaatttttattttggatgcaatttaaa 643 |||||||| |||||||||||| || || |||||||||| | ||||| ||||||||| || Sbjct: 37807 atgcttcgtgactctgtactcgtaatccaaatccaatttgttttttgcatgcaatttcaa 37748 Query: 644 ttagtttttgggtacaaatcgccagaatgtatattcttcctcaatatgctattgagagga 703 ||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||| | Sbjct: 37747 ttagtctttgggtacaaatcgcgaaaatgcatattcttcctcaatatgctattgagagaa 37688 Query: 704 aaagga 709 |||||| Sbjct: 37687 aaagga 37682
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 664 bits (335), Expect = 0.0 Identities = 455/492 (92%), Gaps = 6/492 (1%) Strand = Plus / Minus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||| | | ||||||||| |||||||||||||||||||||||| || Sbjct: 10383 atacagaatggagcgggtggtgagaatcgaactcgcatcgttagcttggaaggctagagg 10324 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10323 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 10264 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagc-tttt 255 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| Sbjct: 10263 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 10204 Query: 256 ctatttgaatggaaccaaagctctctgctttctagatgatccttatagagtaggagatag 315 | | ||||||||||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 10203 ttgtatgaatggaaccaaggctctctgctttctagatgatccctaaagagtaggagatag 10144 Query: 316 aaattctatctaaatccatctaatctacttacttcgttccctaatttcattcaagagatc 375 ||||| | ||||||| |||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 10143 aaatt-tgcctaaatctatctaatctaattacttcgttctctaatttcatttaagagatc 10085 Query: 376 ctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaac 435 ||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| Sbjct: 10084 atgaggaaaagaattgggtttccaccaagctgaaacaatatgctgatggttcttgtaaac 10025 Query: 436 caaaactatcgttttttagctatttggcttccttatcc----tttaacaaaagaagattt 491 |||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||| Sbjct: 10024 caaaactaccgttttttagctatttggcttccatttcctttttttaacaaaagaagattt 9965 Query: 492 agttacgattggaaatcaacttttttgtatcttcatccatagatcctttactcatatttt 551 ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 9964 agttatgattggaaataaatttttttgtatcttcatccatagatcctttactcatatttt 9905 Query: 552 caaaattggaat 563 ||||||||||| Sbjct: 9904 aaaaattggaat 9893 Score = 131 bits (66), Expect = 3e-27 Identities = 112/126 (88%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 585 atgcttcgcgactctgtactcata-tcataatccaatttttattttggatgcaatttaaa 643 |||||||| |||||||||||| || || |||||||||| | ||||| ||||||||| || Sbjct: 9890 atgcttcgtgactctgtactcgtaatccaaatccaatttgttttttgcatgcaatttcaa 9831 Query: 644 ttagtttttgggtacaaatcgccagaatgtatattcttcctcaatatgctattgagagga 703 ||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||| | Sbjct: 9830 ttagtctttgggtacaaatcgcgaaaatgcatattcttcctcaatatgctattgagagaa 9771 Query: 704 aaagga 709 |||||| Sbjct: 9770 aaagga 9765
>dbj|AK062877.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-D01, full insert sequence Length = 553 Score = 371 bits (187), Expect = 2e-99 Identities = 208/215 (96%) Strand = Plus / Minus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 156 Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 155 ttatagtcgacgttggttgattattattaacgtctctaattcaaaaccgaacatgaaatt 96 Query: 197 ttgatttcattcggctcctttatggatattctcaccacttaacatctatgtcagcttttc 256 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 95 ttgatttcattcggctcctttatgggtattctcaccacttaacatctaagtcagcttttt 36 Query: 257 tatttgaatggaaccaaagctctctgctttctaga 291 | | ||||||||||||| ||||||||||||||||| Sbjct: 35 tgtctgaatggaaccaaggctctctgctttctaga 1
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 242 bits (122), Expect = 1e-60 Identities = 134/138 (97%) Strand = Plus / Minus Query: 85 tggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtc 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10533 tggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtc 10474 Query: 145 gacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttc 204 ||||||||||||| ||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct: 10473 gacgttggttgatcatttttaacatctctaattcaaaaccgaacatgagattttggtttc 10414 Query: 205 attcggctcctttatgga 222 |||||||||||||||||| Sbjct: 10413 attcggctcctttatgga 10396 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 |||||| ||||||| |||| ||||| |||||||| ||| || | | || ||||||||| Sbjct: 10224 gatcctaaggaaaataattttgtttctaccgagctcaaataaaaagtcgagggttctagt 10165 Query: 432 aaaccaaaactatcgttttttagctattt 460 |||||||||| ||| |||| |||||||| Sbjct: 10164 aaaccaaaaccatcattttagagctattt 10136 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 37893 gcggatagcgggaatcgaacccgcatc 37867 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 10357 taacatctatgtcagctttt 10338
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 238 bits (120), Expect = 2e-59 Identities = 132/136 (97%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9987 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 9928 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||||| || |||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 9927 cgttgattcattatttttagcgtctctaattcaaaaccgaacatgaaattttggtttcat 9868 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 9867 tcggctcctttatgga 9852 Score = 52.0 bits (26), Expect = 0.003 Identities = 77/94 (81%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||| ||||||| |||||| ||| ||| ||||||| Sbjct: 9633 atccttaggaaaagcattttgtttccgccgagctaaaacaagatgtaaatgtctctagta 9574 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||||||| |||||||| ||||||||| ||||| Sbjct: 9573 aaccaaagttatcgtttaatagctattttgcttc 9540 Score = 44.1 bits (22), Expect = 0.63 Identities = 28/30 (93%) Strand = Plus / Minus Query: 658 caaatcgccagaatgtatattcttcctcaa 687 |||||| | ||||||||||||||||||||| Sbjct: 9324 caaatcacgagaatgtatattcttcctcaa 9295 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/64 (84%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||| || |||| |||||| |||||| |||| ||| || Sbjct: 9517 gaagatttagttacgattagaaat--acacttttatatctttatccatggatcttttcct 9460 Query: 544 cata 547 |||| Sbjct: 9459 cata 9456 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgc 112 |||| ||||||||||||||||||| Sbjct: 38715 gcggatagcgggaatcgaacccgc 38692
>dbj|AB206658.1| Symplocarpus nabekuraensis chloroplast tRNA-Gly (UCC) gene, partial sequence Length = 847 Score = 236 bits (119), Expect = 8e-59 Identities = 134/139 (96%) Strand = Plus / Minus Query: 84 atggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagt 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 atggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagt 690 Query: 144 cgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgattt 203 |||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 689 cgacgtcggttgagcatttttaacgtctctaattcaaaaccgaacatgaaatttttgttt 630 Query: 204 cattcggctcctttatgga 222 ||||||||||||||||||| Sbjct: 629 cattcggctcctttatgga 611 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 |||||||||||||||||| ||||| |||||||||||| ||||||| ||||| ||||||| Sbjct: 398 atcctgaggaaaagaattttgtttctaccgagctgaaagaatatgccgatggctctagta 339 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||||||| ||| |||| ||||||||||||||| Sbjct: 338 aaccaaagtcatcattttctagctatttggcttc 305 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/64 (84%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||| ||||||||||| ||||| ||| |||| | |||| |||||| ||| ||||||| Sbjct: 278 gaagatctagttacgattagaaataaac--ttttctctctttatccatggattctttact 221 Query: 544 cata 547 |||| Sbjct: 220 cata 217
>dbj|AB206657.1| Symplocarpus nipponicus chloroplast tRNA-Gly (UCC) gene, partial sequence Length = 846 Score = 236 bits (119), Expect = 8e-59 Identities = 134/139 (96%) Strand = Plus / Minus Query: 84 atggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagt 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 atggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagt 689 Query: 144 cgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgattt 203 |||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 688 cgacgtcggttgagcatttttaacgtctctaattcaaaaccgaacatgaaatttttgttt 629 Query: 204 cattcggctcctttatgga 222 ||||||||||||||||||| Sbjct: 628 cattcggctcctttatgga 610 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 |||||||||||||||||| ||||| |||||||||||| ||||||| ||||| ||||||| Sbjct: 397 atcctgaggaaaagaattttgtttctaccgagctgaaagaatatgccgatggctctagta 338 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||||||| ||| |||| ||||||||||||||| Sbjct: 337 aaccaaagtcatcattttctagctatttggcttc 304 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaactttt 515 |||||| ||||||||||| ||||| ||||||| Sbjct: 277 gaagatctagttacgattagaaataaactttt 246
>dbj|AB206656.1| Symplocarpus foetidus chloroplast tRNA-Gly (UCC) gene, partial sequence Length = 847 Score = 236 bits (119), Expect = 8e-59 Identities = 134/139 (96%) Strand = Plus / Minus Query: 84 atggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagt 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 atggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagt 690 Query: 144 cgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgattt 203 |||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 689 cgacgtcggttgagcatttttaacgtctctaattcaaaaccgaacatgaaatttttgttt 630 Query: 204 cattcggctcctttatgga 222 ||||||||||||||||||| Sbjct: 629 cattcggctcctttatgga 611 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||||||||||| |||| ||||| |||||||||||| ||||||| ||||| ||||||| Sbjct: 398 atcctgaggaaaataattttgtttctaccgagctgaaagaatatgccgatggctctagta 339 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||||||| ||| |||| ||||||||||||||| Sbjct: 338 aaccaaagtcatcattttctagctatttggcttc 305 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/64 (85%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||| ||||||||||| ||||| ||| |||| |||||| |||||| ||| ||||||| Sbjct: 278 gaagatctagttacgattagaaataaac--ttttctatctttatccatggattctttact 221 Query: 544 cata 547 |||| Sbjct: 220 cata 217
>dbj|AB206655.1| Lysichiton camtschatcensis chloroplast tRNA-Gly (UCC) gene, partial sequence Length = 847 Score = 236 bits (119), Expect = 8e-59 Identities = 134/139 (96%) Strand = Plus / Minus Query: 84 atggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagt 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 atggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagt 690 Query: 144 cgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgattt 203 |||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 689 cgacgtcggttgagcatttttaacgtctctaattcaaaaccgaacatgaaatttttgttt 630 Query: 204 cattcggctcctttatgga 222 ||||||||||||||||||| Sbjct: 629 cattcggctcctttatgga 611 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||||||||||| |||| ||||| |||||||||||| ||||||| ||||| ||||||| Sbjct: 398 atcctgaggaaaataattttgtttctaccgagctgaaagaatatgccgatggctctagta 339 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||||||| ||| |||| ||||||||||||||| Sbjct: 338 aaccaaagtcatcattttctagctatttggcttc 305 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/64 (85%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||| ||||||||||| ||||| ||| |||| |||||| |||||| ||| ||||||| Sbjct: 278 gaagatctagttacgattagaaataaac--ttttctatctttatccatggattctttact 221 Query: 544 cata 547 |||| Sbjct: 220 cata 217
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 234 bits (118), Expect = 3e-58 Identities = 136/142 (95%) Strand = Plus / Minus Query: 81 agaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttat 140 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10632 agaatagagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttat 10573 Query: 141 agtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttga 200 ||||||||||| || || |||||||||||||||||||||||||||||||||||| |||| Sbjct: 10572 agtcgacgttgattcatcatttttaacgtctctaattcaaaaccgaacatgaaactttgg 10513 Query: 201 tttcattcggctcctttatgga 222 |||||||||||||||||||||| Sbjct: 10512 tttcattcggctcctttatgga 10491 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| |||||||| Sbjct: 10421 taacatctatgtcagcttttctgtttgaatg 10391 Score = 42.1 bits (21), Expect = 2.5 Identities = 51/60 (85%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||| || |||| ||| || |||||| ||||||||||| Sbjct: 10141 gaagatttagttacgattagaaat--acgcttttctatatttatccatggatcctttact 10084 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgc 112 |||| ||||||||||||||||||| Sbjct: 40052 gcggatagcgggaatcgaacccgc 40029
>gb|BT013143.1| Lycopersicon esculentum clone 134137F, mRNA sequence Length = 5922 Score = 230 bits (116), Expect = 5e-57 Identities = 131/136 (96%) Strand = Plus / Plus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1949 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 2008 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | || ||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 2009 cgtcgattcattatttttaacgtctctaattcaaaaccgaacatgaaactttggtttcat 2068 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 2069 tcggctcctttatgga 2084 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||| ||| |||||||||||||| |||||||||| |||| |||||| Sbjct: 2275 gatcctgaggaaaaggattttgtttccaccgagctaaaacaatatgttgatgtctctagt 2334 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 2335 aaaccaaagtcatcgtttaatagctattttgcttc 2369 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||| ||| ||| ||||||||||||| ||||||||| | Sbjct: 2396 gaagatttagttacgattagaaataaac---tttctatcttcatccatggatcctttatt 2452 Query: 544 cata 547 |||| Sbjct: 2453 cata 2456
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 230 bits (116), Expect = 5e-57 Identities = 131/136 (96%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10266 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 10207 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | || ||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 10206 cgtcgattcattatttttaacgtctctaattcaaaaccgaacatgaaactttggtttcat 10147 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 10146 tcggctcctttatgga 10131 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||| || |||||||||||||| |||||||||| |||| |||||| Sbjct: 9943 gatcctgaggaaaagggttttgtttccaccgagctaaaacaatatgttgatgtctctagt 9884 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 9883 aaaccaaagtcatcgtttaatagctattttgcttc 9849 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 9822 gaagatttagttacgattagaaatcaac---tttctatcttcatccatggatcctttatt 9766 Query: 544 cata 547 |||| Sbjct: 9765 cata 9762 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 38132 gcggatagcgggaatcgaacccgcatc 38106 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 10067 taacatctatgtcagctttt 10048
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 230 bits (116), Expect = 5e-57 Identities = 131/136 (96%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10042 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 9983 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | || ||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 9982 cgtcgattcattatttttaacgtctctaattcaaaaccgaacatgaaactttggtttcat 9923 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 9922 tcggctcctttatgga 9907 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||| ||| |||||||||||||| |||||||||| |||| |||||| Sbjct: 9721 gatcctgaggaaaaggattttgtttccaccgagctaaaacaatatgttgatgtctctagt 9662 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 9661 aaaccaaagtcatcgtttaatagctattttgcttc 9627 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 9600 gaagatttagttacgattagaaatcaac---tttctatcttcatccatggatcctttatt 9544 Query: 544 cata 547 |||| Sbjct: 9543 cata 9540 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 37866 gcggatagcgggaatcgaacccgcatc 37840 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 9845 taacatctatgtcagctttt 9826
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 230 bits (116), Expect = 5e-57 Identities = 131/136 (96%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9948 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 9889 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | || ||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 9888 cgtcgattcattatttttaacgtctctaattcaaaaccgaacatgaaactttggtttcat 9829 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 9828 tcggctcctttatgga 9813 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||| || |||||||||||||| |||||||||| |||| |||||| Sbjct: 9625 gatcctgaggaaaagggttttgtttccaccgagctaaaacaatatgttgatgtctctagt 9566 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 9565 aaaccaaagtcatcgtttaatagctattttgcttc 9531 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||| ||| ||| ||||||||||||| ||||||||| | Sbjct: 9504 gaagatttagttacgattagaaataaac---tttctatcttcatccatggatcctttatt 9448 Query: 544 cata 547 |||| Sbjct: 9447 cata 9444 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 37383 gcggatagcgggaatcgaacccgcatc 37357 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 9749 taacatctatgtcagctttt 9730
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 230 bits (116), Expect = 5e-57 Identities = 131/136 (96%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9850 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 9791 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | || ||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 9790 cgtcgattcattatttttaacgtctctaattcaaaaccgaacatgaaactttggtttcat 9731 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 9730 tcggctcctttatgga 9715 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||| ||| |||||||||||||| |||||||||| |||| |||||| Sbjct: 9524 gatcctgaggaaaaggattttgtttccaccgagctaaaacaatatgttgatgtctctagt 9465 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 9464 aaaccaaagtcatcgtttaatagctattttgcttc 9430 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||| ||| ||| ||||||||||||| ||||||||| | Sbjct: 9403 gaagatttagttacgattagaaataaac---tttctatcttcatccatggatcctttatt 9347 Query: 544 cata 547 |||| Sbjct: 9346 cata 9343 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 37243 gcggatagcgggaatcgaacccgcatc 37217
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 230 bits (116), Expect = 5e-57 Identities = 131/136 (96%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9847 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 9788 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | || ||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 9787 cgtcgattcattatttttaacgtctctaattcaaaaccgaacatgaaactttggtttcat 9728 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 9727 tcggctcctttatgga 9712 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||| ||| |||||||||||||| |||||||||| |||| |||||| Sbjct: 9521 gatcctgaggaaaaggattttgtttccaccgagctaaaacaatatgttgatgtctctagt 9462 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 9461 aaaccaaagtcatcgtttaatagctattttgcttc 9427 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||| ||| ||| ||||||||||||| ||||||||| | Sbjct: 9400 gaagatttagttacgattagaaataaac---tttctatcttcatccatggatcctttatt 9344 Query: 544 cata 547 |||| Sbjct: 9343 cata 9340 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 37239 gcggatagcgggaatcgaacccgcatc 37213
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 230 bits (116), Expect = 5e-57 Identities = 131/136 (96%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9858 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 9799 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | || ||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 9798 cgtcgattcattatttttaacgtctctaattcaaaaccgaacatgaaactttggtttcat 9739 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 9738 tcggctcctttatgga 9723 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||| ||| |||||||||||||| |||||||||| |||| |||||| Sbjct: 9536 gatcctgaggaaaaggattttgtttccaccgagctaaaacaatatgttgatgtctctagt 9477 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 9476 aaaccaaagtcatcgtttaatagctattttgcttc 9442 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||| ||| ||| ||||||||||||| ||||||||| | Sbjct: 9415 gaagatttagttacgattagaaataaac---tttctatcttcatccatggatcctttatt 9359 Query: 544 cata 547 |||| Sbjct: 9358 cata 9355 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 37264 gcggatagcgggaatcgaacccgcatc 37238 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 9660 taacatctatgtcagctttt 9641
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 230 bits (116), Expect = 5e-57 Identities = 131/136 (96%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10003 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 9944 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | ||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9943 cgtcgattgatcttttttaacgtctctaattcaaaaccgaacatgaaattttggtttcat 9884 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 9883 tcggctcctttatgga 9868 Score = 83.8 bits (42), Expect = 7e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 |||||||||||||||||| |||||||||||||||| || |||||| ||||| |||||| Sbjct: 9628 atcctgaggaaaagaatttggtttccaccgagctggaagaatatgttgatggcgctagta 9569 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||| ||| | ||||||| ||||||||| ||||| Sbjct: 9568 aactaaagccgtcgttttctagctattttgcttc 9535 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/64 (87%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||| ||||||||||| |||||| |||||| | ||||| |||||| ||||||||||| Sbjct: 9508 gaagatctagttacgattagaaatccactttt--gaatctttatccatggatcctttact 9451 Query: 544 cata 547 |||| Sbjct: 9450 cata 9447 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 36976 gcggatagcgggaatcgaacccgcatc 36950 Score = 46.1 bits (23), Expect = 0.16 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand = Plus / Minus Query: 236 taacatctatgtcagcttttctatttgaatggaaccaaagct-ctctgctttctagatga 294 |||||||||||||||||||||| | | |||| | | |||||| ||| ||||||||||||| Sbjct: 9754 taacatctatgtcagcttttctctctaaatgcatctaaagctactc-gctttctagatga 9696 Query: 295 tcc 297 ||| Sbjct: 9695 tcc 9693 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 656 tacaaatcgccagaatgtatattcttcctcaa 687 |||||||| | ||||| ||||||||||||||| Sbjct: 9344 tacaaatcacgagaatttatattcttcctcaa 9313
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 230 bits (116), Expect = 5e-57 Identities = 131/136 (96%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10264 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 10205 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | || ||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 10204 cgtcgattcattatttttaacgtctctaattcaaaaccgaacatgaaactttggtttcat 10145 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 10144 tcggctcctttatgga 10129 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||| || |||||||||||||| |||||||||| |||| |||||| Sbjct: 9941 gatcctgaggaaaagggttttgtttccaccgagctaaaacaatatgttgatgtctctagt 9882 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 9881 aaaccaaagtcatcgtttaatagctattttgcttc 9847 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 9820 gaagatttagttacgattagaaatcaac---tttctatcttcatccatggatcctttatt 9764 Query: 544 cata 547 |||| Sbjct: 9763 cata 9760 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 38129 gcggatagcgggaatcgaacccgcatc 38103 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 10065 taacatctatgtcagctttt 10046
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 222 bits (112), Expect = 1e-54 Identities = 130/136 (95%) Strand = Plus / Plus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30209 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 30268 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | || || |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 30269 cgtcgattcatcatttttaacgtctctaattcaaaaccgaacatgaaactttggtttcat 30328 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 30329 tcggctcctttatgga 30344 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgc 112 |||| ||||||||||||||||||| Sbjct: 36106 gcggatagcgggaatcgaacccgc 36083 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 484 gaagatttagttacgattggaaat 507 |||||||||||||||||| ||||| Sbjct: 30660 gaagatttagttacgattagaaat 30683 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 30405 taacatctatgtcagctttt 30424
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 222 bits (112), Expect = 1e-54 Identities = 130/136 (95%) Strand = Plus / Plus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30306 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 30365 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | || || |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 30366 cgtcgattcatcatttttaacgtctctaattcaaaaccgaacatgaaactttggtttcat 30425 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 30426 tcggctcctttatgga 30441 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgc 112 |||| ||||||||||||||||||| Sbjct: 36183 gcggatagcgggaatcgaacccgc 36160 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 30519 taacatctatgtcagctttt 30538
>gb|AY865171.1| Lactuca sativa chloroplast inversion region Length = 28722 Score = 222 bits (112), Expect = 1e-54 Identities = 130/136 (95%) Strand = Plus / Plus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24146 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 24205 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | || || |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 24206 cgtcgattcatcatttttaacgtctctaattcaaaaccgaacatgaaactttggtttcat 24265 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 24266 tcggctcctttatgga 24281 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 484 gaagatttagttacgattggaaat 507 |||||||||||||||||| ||||| Sbjct: 24597 gaagatttagttacgattagaaat 24620 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 24342 taacatctatgtcagctttt 24361
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 222 bits (112), Expect = 1e-54 Identities = 130/136 (95%) Strand = Plus / Plus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30209 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 30268 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | || || |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 30269 cgtcgattcatcatttttaacgtctctaattcaaaaccgaacatgaaactttggtttcat 30328 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 30329 tcggctcctttatgga 30344 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgc 112 |||| ||||||||||||||||||| Sbjct: 36105 gcggatagcgggaatcgaacccgc 36082 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 484 gaagatttagttacgattggaaat 507 |||||||||||||||||| ||||| Sbjct: 30660 gaagatttagttacgattagaaat 30683 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 30405 taacatctatgtcagctttt 30424
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 222 bits (112), Expect = 1e-54 Identities = 130/136 (95%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10202 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttatagtcga 10143 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | || ||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 10142 cgtcgattcattatttttaacgtctctaattcaaaaccgaacatgaaactttggtttcat 10083 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 10082 tcggctcctttatgga 10067 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||| ||| |||||||||||||| |||||||||| |||| |||||| Sbjct: 9881 gatcctgaggaaaaggattttgtttccaccgagctaaaacaatatgttgatgtctctagt 9822 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 9821 aaaccaaagtcatcgtttaatagctattttgcttc 9787 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 9760 gaagatttagttacgattagaaatcaac---tttctatcttcatccatggatcctttatt 9704 Query: 544 cata 547 |||| Sbjct: 9703 cata 9700 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 38058 gcggatagcgggaatcgaacccgcatc 38032 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 694 attgagaggaaaaggatttaat 715 |||||||||||||||||||||| Sbjct: 9572 attgagaggaaaaggatttaat 9551 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 10005 taacatctatgtcagctttt 9986
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 222 bits (112), Expect = 1e-54 Identities = 130/136 (95%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9949 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 9890 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | || |||||||||||||||| |||||||||||||||||||||| |||| |||||| Sbjct: 9889 cgtcgattcattatttttaacgtctttaattcaaaaccgaacatgaaactttggtttcat 9830 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 9829 tcggctcctttatgga 9814 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||| || |||||||||||||| |||||||||| |||| |||||| Sbjct: 9626 gatcctgaggaaaagggttttgtttccaccgagctaaaacaatatgttgatgtctctagt 9567 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 9566 aaaccaaagtcatcgtttaatagctattttgcttc 9532 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||| ||| ||| ||||||||||||| ||||||||| | Sbjct: 9505 gaagatttagttacgattagaaataaac---tttctatcttcatccatggatcctttatt 9449 Query: 544 cata 547 |||| Sbjct: 9448 cata 9445 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 37387 gcggatagcgggaatcgaacccgcatc 37361 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 9750 taacatctatgtcagctttt 9731
>gb|K02396.1|TOBCPTGG Tobacco chloroplast Gly-tRNA and Arg-tRNA genes and the 3' end of the proton-translocating ATPase alpha-subunit Length = 1553 Score = 222 bits (112), Expect = 1e-54 Identities = 130/136 (95%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1052 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 993 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 || | || ||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 992 cgacgattcattatttttaacgtctctaattcaaaaccgaacatgaaactttggtttcat 933 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 932 tcggctcctttatgga 917 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||| || |||||||||||||| |||||||||| |||| |||||| Sbjct: 730 gatcctgaggaaaagggttttgtttccaccgagctaaaacaatatgttgatgtctctagt 671 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 670 aaaccaaagtcatcgtttaatagctattttgcttc 636 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 609 gaagatttagttacgattagaaatcaac---tttctatcttcatccatggatcctttatt 553 Query: 544 cata 547 |||| Sbjct: 552 cata 549 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 853 taacatctatgtcagctttt 834
>dbj|AB168040.1| Alnus sieboldiana chloroplast trnG gene, partial sequence, haplotype:B Length = 1019 Score = 216 bits (109), Expect = 8e-53 Identities = 127/133 (95%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 678 Query: 148 gttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcatt 207 |||| || || |||||||||||||||||||||||||||||| ||||| |||| ||||||| Sbjct: 677 gttgattcatcatttttaacgtctctaattcaaaaccgaacgtgaaactttggtttcatt 618 Query: 208 cggctcctttatg 220 ||||||||||||| Sbjct: 617 cggctcctttatg 605 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 236 taacatctatgtcagcttttctatttgaatggaaccaaagctctctgctttctagatgat 295 |||||||||||||||||||||| |||||||| | |||| | | |||||||||||||| Sbjct: 532 taacatctatgtcagcttttctgtttgaatgcattcaaaacaacccgctttctagatgat 473 Query: 296 ccttataga 304 || |||||| Sbjct: 472 ccctataga 464 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 379 aggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaaccaa 438 |||||||| ||| |||||||||||||| |||||||||| |||| ||||||||||||| Sbjct: 400 aggaaaagcattttgtttccaccgagctaaaacaatatgtcgatgtctctagtaaaccaa 341 Query: 439 a 439 | Sbjct: 340 a 340 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaat 507 |||||||||||||||||| ||||| Sbjct: 281 gaagatttagttacgattagaaat 258
>dbj|AB168039.1| Alnus sieboldiana chloroplast trnG gene, partial sequence, haplotype:A Length = 1019 Score = 216 bits (109), Expect = 8e-53 Identities = 127/133 (95%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 678 Query: 148 gttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcatt 207 |||| || || |||||||||||||||||||||||||||||| ||||| |||| ||||||| Sbjct: 677 gttgattcatcatttttaacgtctctaattcaaaaccgaacgtgaaactttggtttcatt 618 Query: 208 cggctcctttatg 220 ||||||||||||| Sbjct: 617 cggctcctttatg 605 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 236 taacatctatgtcagcttttctatttgaatggaaccaaagctctctgctttctagatgat 295 |||||||||||||||||||||| |||||||| | |||| | | |||||||||||||| Sbjct: 532 taacatctatgtcagcttttctgtttgaatgcattcaaaacaacccgctttctagatgat 473 Query: 296 ccttataga 304 || |||||| Sbjct: 472 ccctataga 464 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 379 aggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaaccaa 438 |||||||| ||| |||||||||||||| |||||||||| |||| ||||||||||||| Sbjct: 400 aggaaaagcattttgtttccaccgagctaaaacaatatgtcgatgtctctagtaaaccaa 341 Query: 439 a 439 | Sbjct: 340 a 340 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaat 507 |||||||||||||||||| ||||| Sbjct: 281 gaagatttagttacgattagaaat 258
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 214 bits (108), Expect = 3e-52 Identities = 129/136 (94%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 8935 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttatagtcga 8876 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||||| || || ||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 8875 cgttgatttcttctttttaacgtctctaattcaaaaccgaacatgaaactttggtttcat 8816 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 8815 tcggctcctttatgga 8800 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/54 (87%), Gaps = 2/54 (3%) Strand = Plus / Minus Query: 483 agaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatc 536 ||||||||||||||||||| |||| | |||||| ||||||||||||| |||| Sbjct: 8481 agaagatttagttacgattagaaacc--tttttttatatcttcatccatggatc 8430 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgc 112 |||||| ||||||||||||||||||| Sbjct: 35230 gagcggatagcgggaatcgaacccgc 35205 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaa 413 ||||| |||||||| ||| |||||||||||||| |||||| Sbjct: 8605 atcctaaggaaaagtattttgtttccaccgagctaaaacaa 8565 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 8734 taacatctatgtcagctttt 8715
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 212 bits (107), Expect = 1e-51 Identities = 131/138 (94%), Gaps = 2/138 (1%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11307 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 11248 Query: 147 cgttggttga--ttatttttaacgtctctaattcaaaaccgaacatgaaattttgatttc 204 ||| | || | |||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 11247 cgtcgattcattttatttttaacgtctctaattcaaaaccgaacatgaaactttggtttc 11188 Query: 205 attcggctcctttatgga 222 |||||||||||||||||| Sbjct: 11187 attcggctcctttatgga 11170 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 |||||||||||||| ||| |||||||||||||| ||||||||| |||| ||||||| Sbjct: 10986 atcctgaggaaaagcattttgtttccaccgagctaaaacaatatttcgatgtctctagta 10927 Query: 433 aaccaaa 439 ||||||| Sbjct: 10926 aaccaaa 10920 Score = 61.9 bits (31), Expect = 3e-06 Identities = 55/62 (88%), Gaps = 2/62 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||| |||||| | |||||||||||| ||||||||||| Sbjct: 10856 gaagatttagttacgattagaaatacacttttct--atcttcatccatggatcctttact 10799 Query: 544 ca 545 || Sbjct: 10798 ca 10797 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 40184 gcggatagcgggaatcgaacccgcatc 40158 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagcttttct 257 |||||||||||||||||||||| Sbjct: 11112 taacatctatgtcagcttttct 11091
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 212 bits (107), Expect = 1e-51 Identities = 128/135 (94%) Strand = Plus / Minus Query: 86 ggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcg 145 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12546 ggagcgggcggcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcg 12487 Query: 146 acgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttca 205 ||||| || ||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 12486 acgttaattcattatttttaacgtctctaattcaaaaccgaacatgaaactttggtttca 12427 Query: 206 ttcggctcctttatg 220 ||||||||||||||| Sbjct: 12426 ttcggctcctttatg 12412 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||| | ||||||||||||||||||| ||||| ||||| Sbjct: 12040 gaagatttagttacgattagaaataga--tttttgtatcttcatccatggatcccttact 11983 Query: 544 cata 547 |||| Sbjct: 11982 cata 11979 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 41559 gcggatagcgggaatcgaacccgcatc 41533 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 12283 taacatctatgtcagcttttctgtatgaatg 12253
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 212 bits (107), Expect = 1e-51 Identities = 128/135 (94%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11010 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 10951 Query: 148 gttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcatt 207 || | || | |||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 10950 gtcgattcagcatttttaacgtctctaattcaaaaccgaacatgaaactttggtttcatt 10891 Query: 208 cggctcctttatgga 222 ||||||||||||||| Sbjct: 10890 cggctcctttatgga 10876 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| |||||| || |||| ||||| ||||||| ||||||||||| Sbjct: 10564 gaagatttagttacgattagaaatctac--ttttctatctccatccatggatcctttact 10507 Query: 544 cata 547 |||| Sbjct: 10506 cata 10503 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgc 112 |||| ||||||||||||||||||| Sbjct: 38490 gcggatagcgggaatcgaacccgc 38467 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 10819 taacatctatgtcagctttt 10800
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 208 bits (105), Expect = 2e-50 Identities = 129/137 (94%) Strand = Plus / Plus Query: 86 ggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17788 ggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcg 17847 Query: 146 acgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttca 205 ||| ||||| | ||||| | |||||||||||||||||||||||||||| |||| ||||| Sbjct: 17848 acgctggtttttaattttgagcgtctctaattcaaaaccgaacatgaaactttggtttca 17907 Query: 206 ttcggctcctttatgga 222 ||||||||||||||||| Sbjct: 17908 ttcggctcctttatgga 17924 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 tgctttctagatgatccttataga 304 ||||||||||||||||||| |||| Sbjct: 18030 tgctttctagatgatccttctaga 18053 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 17981 taacatctatgtcagctttt 18000
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 206 bits (104), Expect = 7e-50 Identities = 128/136 (94%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11453 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 11394 Query: 147 cgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcat 206 ||| | || || | | |||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 11393 cgtcgattcatcactattaacgtctctaattcaaaaccgaacatgaaactttggtttcat 11334 Query: 207 tcggctcctttatgga 222 |||||||||||||||| Sbjct: 11333 tcggctcctttatgga 11318 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/64 (87%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||| ||||||||||| ||||| |||||| |||||||||||||| |||| |||||| Sbjct: 10932 gaagatctagttacgattagaaatacactttt--gtatcttcatccatggatcttttact 10875 Query: 544 cata 547 |||| Sbjct: 10874 cata 10871 Score = 54.0 bits (27), Expect = 7e-04 Identities = 56/63 (88%), Gaps = 2/63 (3%) Strand = Plus / Minus Query: 236 taacatctatgtcagcttttctatttgaatggaaccaaagct-ctctgctttctagatga 294 ||||| |||||||||||||||| | |||||| | |||||||| ||| ||||||||||||| Sbjct: 11175 taacacctatgtcagcttttctgtctgaatgtatccaaagctactc-gctttctagatga 11117 Query: 295 tcc 297 ||| Sbjct: 11116 tcc 11114 Score = 48.1 bits (24), Expect = 0.040 Identities = 39/44 (88%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatat 416 ||||| ||||||||||| | |||| |||||||||||||||||| Sbjct: 11049 atccttaggaaaagaatctgatttctaccgagctgaaacaatat 11006 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 40006 gcggatagcgggaatcgaacccgcatc 39980
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 204 bits (103), Expect = 3e-49 Identities = 127/135 (94%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10243 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 10184 Query: 148 gttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcatt 207 |||| || || ||||||||||||||||| |||||||||||||||| |||| ||||||| Sbjct: 10183 gttgattcatcgtttttaacgtctctaatacaaaaccgaacatgaatttttcgtttcatt 10124 Query: 208 cggctcctttatgga 222 ||||||||||||||| Sbjct: 10123 cggctcctttatgga 10109 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 394 tttccaccgagctgaaacaatatgcggatggttctagtaaaccaaaactatcgtttttta 453 |||||||||||||||||||||||| || || ||| |||||||||| |||||| || Sbjct: 9838 tttccaccgagctgaaacaatatgtcgacggctctggtaaaccaaagtcatcgttcaata 9779 Query: 454 gctatttggcttc 466 ||||||||||||| Sbjct: 9778 gctatttggcttc 9766 Score = 54.0 bits (27), Expect = 7e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 649 ttttgggtacaaatcgccagaatgtatattcttcctcaa 687 |||||| |||||||| | ||||||||||||||||||||| Sbjct: 9577 ttttggatacaaatcacgagaatgtatattcttcctcaa 9539 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||| ||||||||||| ||||| |||||| || ||||||||||| ||||||||||| Sbjct: 9739 gaagatctagttacgattagaaatatactttt--gtctcttcatccatggatcctttact 9682 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 37521 gcggatagcgggaatcgaacccgcatc 37495 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 9986 taacatctatgtcagctttt 9967
>emb|AJ577577.1|OEU577577 Olea europaea subsp. cuspidata chloroplast tRNA-Gln (UUG) gene (partial), psbK gene, tRNA-Ser (GCU) gene, tRNA-Gly (UCC) gene and tRNA-Arg (UCU) gene (partial) Length = 2967 Score = 204 bits (103), Expect = 3e-49 Identities = 127/135 (94%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2752 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 2693 Query: 148 gttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcatt 207 || | || | ||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 2692 gtcgattcagcattttgaacgtctctaattcaaaaccgaacatgaaactttggtttcatt 2633 Query: 208 cggctcctttatgga 222 ||||||||||||||| Sbjct: 2632 cggctcctttatgga 2618 Score = 63.9 bits (32), Expect = 7e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 379 aggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaaccaa 438 |||||||| ||| |||||||||||||| |||||||||| |||| ||||||||||||| Sbjct: 2440 aggaaaaggattttgtttccaccgagctaaaacaatatgtcgatgtctctagtaaaccaa 2381 Query: 439 aactatcgttttttagctatttggcttc 466 | ||||||| ||||||||| ||||| Sbjct: 2380 agtcatcgtttaatagctattttgcttc 2353 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| |||||| || ||| |||||||| |||| ||||||||||| Sbjct: 2325 gaagatttagttacgattagaaatctac---tttctatcttcagccatggatcctttact 2269 Query: 544 cata 547 |||| Sbjct: 2268 cata 2265
>emb|AJ577576.1|OEU577576 Olea europaea subsp. cuspidata chloroplast tRNA-Gln (UUG) gene (partial), psbK gene, tRNA-Ser (GCU) gene, tRNA-Gly (UCC) gene and tRNA-Arg (UCU) gene (partial) Length = 2967 Score = 204 bits (103), Expect = 3e-49 Identities = 127/135 (94%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2753 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 2694 Query: 148 gttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcatt 207 || | || | ||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 2693 gtcgattcagcattttgaacgtctctaattcaaaaccgaacatgaaactttggtttcatt 2634 Query: 208 cggctcctttatgga 222 ||||||||||||||| Sbjct: 2633 cggctcctttatgga 2619 Score = 63.9 bits (32), Expect = 7e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 379 aggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaaccaa 438 |||||||| ||| |||||||||||||| |||||||||| |||| ||||||||||||| Sbjct: 2441 aggaaaaggattttgtttccaccgagctaaaacaatatgtcgatgtctctagtaaaccaa 2382 Query: 439 aactatcgttttttagctatttggcttc 466 | ||||||| ||||||||| ||||| Sbjct: 2381 agtcatcgtttaatagctattttgcttc 2354 Score = 60.0 bits (30), Expect = 1e-05 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| |||||| || ||| |||||||| |||| ||||||||||| Sbjct: 2326 gaagatttagttacgattagaaatctac---tttctatcttcagccatggatcctttact 2270 Query: 544 cata 547 |||| Sbjct: 2269 cata 2266
>emb|AJ577575.1|OEU577575 Olea europaea subsp. laperrinei chloroplast tRNA-Gln (UUG) gene (partial), psbK gene, tRNA-Ser (GCU) gene, tRNA-Gly (UCC) gene and tRNA-Arg (UCU) gene (partial) Length = 2959 Score = 204 bits (103), Expect = 3e-49 Identities = 127/135 (94%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2745 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 2686 Query: 148 gttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcatt 207 || | || | ||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 2685 gtcgattcagcattttgaacgtctctaattcaaaaccgaacatgaaactttggtttcatt 2626 Query: 208 cggctcctttatgga 222 ||||||||||||||| Sbjct: 2625 cggctcctttatgga 2611 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| |||||| ||||| | |||||||||||| ||||||||||| Sbjct: 2318 gaagatttagttacgattagaaatctactttct---atcttcatccatggatcctttact 2262 Query: 544 cata 547 |||| Sbjct: 2261 cata 2258 Score = 63.9 bits (32), Expect = 7e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 379 aggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaaccaa 438 |||||||| ||| |||||||||||||| |||||||||| |||| ||||||||||||| Sbjct: 2433 aggaaaaggattttgtttccaccgagctaaaacaatatgtcgatgtctctagtaaaccaa 2374 Query: 439 aactatcgttttttagctatttggcttc 466 | ||||||| ||||||||| ||||| Sbjct: 2373 agtcatcgtttaatagctattttgcttc 2346
>emb|AJ577578.2|OEU577578 Olea europaea subsp. europaea chloroplast tRNA-Gln (UUG) gene (partial), psbK gene, tRNA-Ser (GCU) gene, tRNA-Gly (UCC) gene and tRNA-Arg (UCU) gene (partial) Length = 2963 Score = 204 bits (103), Expect = 3e-49 Identities = 127/135 (94%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2749 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 2690 Query: 148 gttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcatt 207 || | || | ||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 2689 gtcgattcagcattttgaacgtctctaattcaaaaccgaacatgaaactttggtttcatt 2630 Query: 208 cggctcctttatgga 222 ||||||||||||||| Sbjct: 2629 cggctcctttatgga 2615 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| |||||| ||||| | |||||||||||| ||||||||||| Sbjct: 2322 gaagatttagttacgattagaaatctactttct---atcttcatccatggatcctttact 2266 Query: 544 cata 547 |||| Sbjct: 2265 cata 2262 Score = 63.9 bits (32), Expect = 7e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 379 aggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaaccaa 438 |||||||| ||| |||||||||||||| |||||||||| |||| ||||||||||||| Sbjct: 2437 aggaaaaggattttgtttccaccgagctaaaacaatatgtcgatgtctctagtaaaccaa 2378 Query: 439 aactatcgttttttagctatttggcttc 466 | ||||||| ||||||||| ||||| Sbjct: 2377 agtcatcgtttaatagctattttgcttc 2350
>gb|AY796182.1| Lepidium appelianum haplotype 56 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 403 Score = 176 bits (89), Expect = 7e-41 Identities = 128/142 (90%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 254 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 195 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 194 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 135 Query: 199 gatttcattcggctcctttatg 220 |||||||||||||||||||||| Sbjct: 134 gatttcattcggctcctttatg 113
>gb|AY796181.1| Lepidium appelianum haplotype 54 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 403 Score = 176 bits (89), Expect = 7e-41 Identities = 128/142 (90%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 254 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 195 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 194 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 135 Query: 199 gatttcattcggctcctttatg 220 |||||||||||||||||||||| Sbjct: 134 gatttcattcggctcctttatg 113
>gb|AY796177.1| Lepidium appelianum haplotype 50 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 176 bits (89), Expect = 7e-41 Identities = 128/142 (90%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 |||||||||||||||||||||| Sbjct: 133 gatttcattcggctcctttatg 112
>gb|AY796175.1| Lepidium appelianum haplotype 48 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 176 bits (89), Expect = 7e-41 Identities = 128/142 (90%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 |||||||||||||||||||||| Sbjct: 133 gatttcattcggctcctttatg 112
>gb|AY796172.1| Lepidium appelianum haplotype 45 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 403 Score = 176 bits (89), Expect = 7e-41 Identities = 128/142 (90%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 254 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 195 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 194 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 135 Query: 199 gatttcattcggctcctttatg 220 |||||||||||||||||||||| Sbjct: 134 gatttcattcggctcctttatg 113
>gb|AY796171.1| Lepidium appelianum haplotype 44 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 401 Score = 176 bits (89), Expect = 7e-41 Identities = 128/142 (90%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 |||||||||||||||||||||| Sbjct: 133 gatttcattcggctcctttatg 112
>gb|AY796144.1| Lepidium appelianum haplotype 17 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 176 bits (89), Expect = 7e-41 Identities = 128/142 (90%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 |||||||||||||||||||||| Sbjct: 133 gatttcattcggctcctttatg 112
>gb|AY796142.1| Lepidium appelianum haplotype 15 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 394 Score = 176 bits (89), Expect = 7e-41 Identities = 128/142 (90%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 |||||||||||||||||||||| Sbjct: 133 gatttcattcggctcctttatg 112
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 176 bits (89), Expect = 7e-41 Identities = 128/142 (90%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 9432 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 9373 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| | ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9372 cgtcgattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 9313 Query: 199 gatttcattcggctcctttatg 220 | |||||||||||||||||||| Sbjct: 9312 ggtttcattcggctcctttatg 9291 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgc 112 |||| ||||||||||||||||||| Sbjct: 36559 gcggatagcgggaatcgaacccgc 36536 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 tgctttctagatgatccttataga 304 ||||||||||||||||||| |||| Sbjct: 9184 tgctttctagatgatccttctaga 9161
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 174 bits (88), Expect = 3e-40 Identities = 127/140 (90%), Gaps = 5/140 (3%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10242 agcggatagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 10183 Query: 148 gttggttgattattt-----ttaacgtctctaattcaaaaccgaacatgaaattttgatt 202 |||| || || |||| | |||||||||||||||||||||||| ||||| |||| || Sbjct: 10182 gttgattcatcattttgaactgaacgtctctaattcaaaaccgaacgtgaaactttggtt 10123 Query: 203 tcattcggctcctttatgga 222 |||||||||||||||||||| Sbjct: 10122 tcattcggctcctttatgga 10103 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 38652 gcggatagcgggaatcgaacccgcatc 38626
>emb|X66734.1|APCHLOG Allium porrum chloroplast genes for tRNA-Gly, tRNA-Arg and CF1 ATPase alpha subunit Length = 1029 Score = 172 bits (87), Expect = 1e-39 Identities = 127/139 (91%), Gaps = 1/139 (0%) Strand = Plus / Minus Query: 84 atggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagt 143 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 atggggcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagt 247 Query: 144 cgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgattt 203 ||||||| | || ||| |||||||||||||||| ||||||||||| ||| ||| ||| Sbjct: 246 cgacgttaacttatcattcttaacgtctctaattc-aaaccgaacattaaaattttgttt 188 Query: 204 cattcggctcctttatgga 222 ||||||||||||||||||| Sbjct: 187 cattcggctcctttatgga 169 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 aaatccatctaatctacttacttcgttcccta 358 |||||| ||||||||| ||||||||||||||| Sbjct: 43 aaatccgtctaatctagttacttcgttcccta 12 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagcttttc 256 ||||||||||||||||||||| Sbjct: 132 taacatctatgtcagcttttc 112
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 172 bits (87), Expect = 1e-39 Identities = 120/131 (91%) Strand = Plus / Plus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 51449 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttatagtagac 51508 Query: 148 gttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcatt 207 ||| ||| ||||| || |||||||||||||||||||||||| ||||| ||| ||||||| Sbjct: 51509 gttcgttcattatcttgaacgtctctaattcaaaaccgaacgtgaaacttttgtttcatt 51568 Query: 208 cggctccttta 218 | ||||||||| Sbjct: 51569 cagctccttta 51579 Score = 48.1 bits (24), Expect = 0.040 Identities = 68/80 (85%), Gaps = 2/80 (2%) Strand = Plus / Plus Query: 485 aagatttagttacgattggaaatcaacttttttgtatcttca-tccatagatcctttact 543 ||||||||||||||||| ||||| ||| ||| | |||||| | ||||| ||||||||||| Sbjct: 51896 aagatttagttacgattagaaataaac-tttctatatctttattccatggatcctttact 51954 Query: 544 catattttcaaaattggaat 563 ||| || ||||||||||| Sbjct: 51955 tatacttaaaaaattggaat 51974 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gcgggtagcgggaatcgaacccgc 112 |||| ||||||||||||||||||| Sbjct: 24307 gcggatagcgggaatcgaacccgc 24330
>gb|AY796183.1| Lepidium draba haplotype 57 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796179.1| Lepidium draba haplotype 52 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796178.1| Lepidium draba haplotype 51 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796176.1| Lepidium draba haplotype 49 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796173.1| Lepidium draba haplotype 46 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796170.1| Lepidium draba haplotype 43 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 396 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796169.1| Lepidium draba haplotype 42 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796168.1| Lepidium draba haplotype 41 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796167.1| Lepidium draba haplotype 40 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796166.1| Lepidium draba haplotype 39 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796163.1| Lepidium draba haplotype 36 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796160.1| Lepidium draba haplotype 33 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796159.1| Lepidium draba haplotype 32 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796158.1| Lepidium draba haplotype 31 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796157.1| Lepidium draba haplotype 30 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 386 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796156.1| Lepidium draba haplotype 29 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796155.1| Lepidium draba haplotype 28 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796154.1| Lepidium draba haplotype 27 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796153.1| Lepidium draba haplotype 26 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796152.1| Lepidium draba haplotype 25 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796151.1| Lepidium draba haplotype 24 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796150.1| Lepidium draba haplotype 23 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796149.1| Lepidium draba haplotype 22 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796148.1| Lepidium draba haplotype 21 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796147.1| Lepidium draba haplotype 20 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796146.1| Lepidium draba haplotype 19 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796145.1| Lepidium draba haplotype 18 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796143.1| Lepidium draba haplotype 16 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796141.1| Lepidium draba haplotype 14 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796140.1| Lepidium draba haplotype 12 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796139.1| Lepidium draba haplotype 11 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796138.1| Lepidium draba haplotype 10 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796137.1| Lepidium draba haplotype 9 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796136.1| Lepidium draba haplotype 8 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796135.1| Lepidium draba haplotype 7 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796133.1| Lepidium draba haplotype 5 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796132.1| Lepidium draba haplotype 4 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796131.1| Lepidium draba haplotype 3 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796130.1| Lepidium draba haplotype 2 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|AY796129.1| Lepidium draba haplotype 1 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 9179 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 9120 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| | | ||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9119 cgtcgatcgatcagttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 9060 Query: 199 gatttcattcggctcctttatg 220 | |||||||||||||||||||| Sbjct: 9059 ggtttcattcggctcctttatg 9038 Score = 48.1 bits (24), Expect = 0.040 Identities = 39/44 (88%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatat 416 ||||| |||||||| ||| |||||||||||||| ||||||||| Sbjct: 8842 atccttaggaaaagtattttgtttccaccgagctaaaacaatat 8799 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgc 112 |||| ||||||||||||||||||| Sbjct: 35689 gcggatagcgggaatcgaacccgc 35666 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaactttt 515 |||||||||||||||||| |||| ||||||| Sbjct: 8711 gaagatttagttacgattagaaagaaactttt 8680
>emb|X54725.1|CHSATRNG Sinapis alba chloroplast trnG gene for transfer RNA-Gly Length = 996 Score = 168 bits (85), Expect = 2e-38 Identities = 127/142 (89%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 912 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 853 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 || | ||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 852 cgacgattgatcagttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 793 Query: 199 gatttcattcggctcctttatg 220 | |||||||||||||||||||| Sbjct: 792 ggtttcattcggctcctttatg 771 Score = 40.1 bits (20), Expect = 9.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatat 416 ||||| |||||||| ||| ||||||||||||| ||||||||| Sbjct: 575 atccttaggaaaagtattttttttccaccgagctaaaacaatat 532 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaactttt 515 |||||||||||||||||| |||| ||||||| Sbjct: 444 gaagatttagttacgattagaaagaaactttt 413
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 167 bits (84), Expect = 6e-38 Identities = 126/140 (90%), Gaps = 5/140 (3%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10232 agcggatagcgggaatcgaacccgcatcgttagcttggaaggctaggggtaatagtcgac 10173 Query: 148 gttggttgattattt-----ttaacgtctctaattcaaaaccgaacatgaaattttgatt 202 |||| || || |||| | |||||||||||||||||||||||| ||||| |||| || Sbjct: 10172 gttgattcatcattttgaactgaacgtctctaattcaaaaccgaacgtgaaactttggtt 10113 Query: 203 tcattcggctcctttatgga 222 |||||||||||||||||||| Sbjct: 10112 tcattcggctcctttatgga 10093 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||| |||||||||||||||||||||| Sbjct: 38635 gcggatagcgggaatcgaacccgcatc 38609
>gb|AY796180.1| Lepidium propinquum haplotype 53 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 161 bits (81), Expect = 4e-36 Identities = 126/142 (88%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgattattttta--------acgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||| | ||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattggtcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 |||||||||||||||||||||| Sbjct: 133 gatttcattcggctcctttatg 112
>gb|AY796174.1| Lepidium propinquum haplotype 47 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 161 bits (81), Expect = 4e-36 Identities = 126/142 (88%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgattattttta--------acgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||| | ||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattggtcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 |||||||||||||||||||||| Sbjct: 133 gatttcattcggctcctttatg 112
>gb|AY796165.1| Lepidium propinquum haplotype 38 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 161 bits (81), Expect = 4e-36 Identities = 126/142 (88%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgattattttta--------acgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||| | ||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattggtcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 |||||||||||||||||||||| Sbjct: 133 gatttcattcggctcctttatg 112
>gb|AY796164.1| Lepidium propinquum haplotype 37 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 161 bits (81), Expect = 4e-36 Identities = 126/142 (88%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgattattttta--------acgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||| | ||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattggtcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 |||||||||||||||||||||| Sbjct: 133 gatttcattcggctcctttatg 112
>gb|AY796162.1| Lepidium propinquum haplotype 35 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 161 bits (81), Expect = 4e-36 Identities = 126/142 (88%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgattattttta--------acgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||| | ||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattggtcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 |||||||||||||||||||||| Sbjct: 133 gatttcattcggctcctttatg 112
>gb|AY796161.1| Lepidium propinquum haplotype 34 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 161 bits (81), Expect = 4e-36 Identities = 126/142 (88%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgattattttta--------acgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||| | ||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattggtcatttttatatttttaacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 |||||||||||||||||||||| Sbjct: 133 gatttcattcggctcctttatg 112
>gb|AY796134.1| Lepidium draba haplotype 6 tRNA-Gly (trnG) gene and trnG-trnR intergenic spacer, partial sequence; chloroplast Length = 395 Score = 161 bits (81), Expect = 4e-36 Identities = 126/142 (88%), Gaps = 8/142 (5%) Strand = Plus / Minus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 253 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttttagtcga 194 Query: 147 cgttggttgat--------tatttttaacgtctctaattcaaaaccgaacatgaaatttt 198 ||| ||||| ||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 193 cgtcaattgatcatttttatatttttcacgtctctaattcaaaaccgaacatgaaacttt 134 Query: 199 gatttcattcggctcctttatg 220 ||||||||||||||||||||| Sbjct: 133 aatttcattcggctcctttatg 112
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 161 bits (81), Expect = 4e-36 Identities = 123/136 (90%), Gaps = 2/136 (1%) Strand = Plus / Plus Query: 87 gagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 56731 gagcgggtagctggaatcgaacccgcatcgttagcttggaaggctatcggttatagtcga 56790 Query: 147 cgttggttgattattt--ttaacgtctctaattcaaaaccgaacatgaaattttgatttc 204 |||| || || |||| | ||| |||||||||||||||||||||||||| |||| |||| Sbjct: 56791 tgttgattcatcatttaatgaacatctctaattcaaaaccgaacatgaaactttggtttc 56850 Query: 205 attcggctcctttatg 220 |||||||||||||||| Sbjct: 56851 attcggctcctttatg 56866 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/64 (85%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| |||||| || ||| |||||| |||||| |||| |||||| Sbjct: 57278 gaagatttagttacgattagaaatccac--ctttctatctttatccatggatcttttact 57335 Query: 544 cata 547 |||| Sbjct: 57336 cata 57339 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 atctatgtcagcttttctatttgaat 265 |||||||||||||||||| ||||||| Sbjct: 56947 atctatgtcagcttttctctttgaat 56972 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gcgggtagcgggaatcgaacccgc 112 |||| ||||||||||||||||||| Sbjct: 28755 gcggatagcgggaatcgaacccgc 28778
>gb|S70467.1| Allium porrum tRNA-Gly gene, partial sequence; tRNA-Arg gene, complete sequence; and CF1ATPase alpha-subunit gene, partial cds; chloroplast genes for chloroplast products Length = 1030 Score = 159 bits (80), Expect = 2e-35 Identities = 127/140 (90%), Gaps = 2/140 (1%) Strand = Plus / Minus Query: 84 atggagcgggtagcgggaatcgaacccgcatcgtt-agcttggaaggctaggggttatag 142 |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 307 atggggcgggtagcgggaatcgaacccgcatcgttaagcttggaaggctaggggttatag 248 Query: 143 tcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatt 202 |||||||| | || ||| |||||||||||||||| ||||||||||| ||| ||| || Sbjct: 247 tcgacgttaacttatcattcttaacgtctctaattc-aaaccgaacattaaaattttgtt 189 Query: 203 tcattcggctcctttatgga 222 |||||||||||||||||||| Sbjct: 188 tcattcggctcctttatgga 169 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 aaatccatctaatctacttacttcgttcccta 358 |||||| ||||||||| ||||||||||||||| Sbjct: 43 aaatccgtctaatctagttacttcgttcccta 12 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagcttttc 256 ||||||||||||||||||||| Sbjct: 132 taacatctatgtcagcttttc 112
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 155 bits (78), Expect = 2e-34 Identities = 124/141 (87%), Gaps = 10/141 (7%) Strand = Plus / Plus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51973 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 52032 Query: 148 gttggttgattatttt----------taacgtctctaattcaaaaccgaacatgaaattt 197 |||| || || ||||| ||||||||||||||||||||||||| ||||| || Sbjct: 52033 gttgattcatcattttgatttcaatttaacgtctctaattcaaaaccgaacgtgaaactt 52092 Query: 198 tgatttcattcggctccttta 218 | |||||||||||||||||| Sbjct: 52093 ttgtttcattcggctccttta 52113 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 gcgggtagcgggaatcgaacccgc 112 |||| ||||||||||||||||||| Sbjct: 24242 gcggatagcgggaatcgaacccgc 24265
>gb|U48233.1|OHU48233 Oenothera elata subsp. hookeri chloroplast spacer between (trnG) and (trnH) genes Length = 540 Score = 149 bits (75), Expect = 1e-32 Identities = 112/123 (91%), Gaps = 1/123 (0%) Strand = Plus / Minus Query: 99 ggaatcgaacccgcatcgttagcttgg-aaggctaggggttatagtcgacgttggttgat 157 ||||||||||||||||||||||||||| ||||||| |||||||||||| |||| || || Sbjct: 255 ggaatcgaacccgcatcgttagcttgggaaggctatcggttatagtcgatgttgattcat 196 Query: 158 tatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctccttt 217 ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 195 cattttgaacatctctaattcaaaaccgaacatgaaactttggtttcattcggctccttt 136 Query: 218 atg 220 ||| Sbjct: 135 atg 133 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Minus Query: 240 atctatgtcagcttttctatttgaat 265 |||||||||||||||||| ||||||| Sbjct: 52 atctatgtcagcttttctctttgaat 27
>dbj|AP005607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_D08 Length = 88854 Score = 149 bits (75), Expect = 1e-32 Identities = 125/139 (89%), Gaps = 2/139 (1%) Strand = Plus / Plus Query: 535 tcctttactcatattttcaaaattggaatacttaaatccaatgcaaaattatgcttcgcg 594 ||||||||| ||||||| ||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 6362 tcctttactgatattttaaaaattggaatccttaa-tcgaatgcaaaattatgcttcgcg 6420 Query: 595 actctgtactcata-tcataatccaatttttattttggatgcaatttaaattagtttttg 653 |||||||||||||| || |||| ||||| | ||||||||||||||| ||||||| || | Sbjct: 6421 actctgtactcataatccaaatctaatttgttttttggatgcaattttaattagtcttcg 6480 Query: 654 ggtacaaatcgccagaatg 672 ||||||||||||||||||| Sbjct: 6481 ggtacaaatcgccagaatg 6499
>gb|AY727225.1| Trillium ovatum tRNA-Gly (trnG), intron; chloroplast Length = 674 Score = 147 bits (74), Expect = 6e-32 Identities = 83/86 (96%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 674 ttatagtcgacgttggttgatcatttttaacgtctctaattcaaaaccgaacatgaaatt 615 Query: 197 ttgatttcattcggctcctttatgga 222 || |||||||||||||||||||||| Sbjct: 614 tttctttcattcggctcctttatgga 589 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| Sbjct: 428 gatcctgaggaaaagaatttggtttccaccgagcggaaacaatatgccgatggttctagt 369 Query: 432 aaaccaaaactatcgttttttagcta 457 |||||||||| | |||||| |||||| Sbjct: 368 aaaccaaaaccaccgttttctagcta 343 Score = 69.9 bits (35), Expect = 1e-08 Identities = 57/63 (90%), Gaps = 1/63 (1%) Strand = Plus / Minus Query: 650 tttgggtacaaatcgccagaatgtatattcttcctc-aatatgctattgagaggaaaagg 708 ||||| ||||||||| ||||||||||||||||||| ||||||| ||||||||| ||||| Sbjct: 154 tttggatacaaatcgtgagaatgtatattcttcctcaaatatgccattgagaggtaaagg 95 Query: 709 att 711 ||| Sbjct: 94 att 92 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/64 (85%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||| ||||||||||||||||| ||| ||| ||||||| |||||| |||||| ||| Sbjct: 308 gaagatctagttacgattggaaataaac--tttcgtatctttatccatgtatccttgact 251 Query: 544 cata 547 |||| Sbjct: 250 cata 247 Score = 44.1 bits (22), Expect = 0.63 Identities = 28/30 (93%) Strand = Plus / Minus Query: 236 taacatctatgtcagcttttctatttgaat 265 |||||||||||||||||||| ||| ||||| Sbjct: 553 taacatctatgtcagcttttttatctgaat 524
>gb|AY727224.1| Trillium texanum tRNA-Gly (trnG), intron; chloroplast Length = 680 Score = 147 bits (74), Expect = 6e-32 Identities = 83/86 (96%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 680 ttatagtcgacgttggttgatcatttttaacgtctctaattcaaaaccgaacatgaaatt 621 Query: 197 ttgatttcattcggctcctttatgga 222 || |||||||||||||||||||||| Sbjct: 620 tttctttcattcggctcctttatgga 595 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| Sbjct: 434 gatcctgaggaaaagaatttggtttccaccgagcggaaacaatatgccgatggttctagt 375 Query: 432 aaaccaaaactatcgttttttagcta 457 ||||||||| | |||||| |||||| Sbjct: 374 aaaccaaaatcaccgttttctagcta 349 Score = 69.9 bits (35), Expect = 1e-08 Identities = 57/63 (90%), Gaps = 1/63 (1%) Strand = Plus / Minus Query: 650 tttgggtacaaatcgccagaatgtatattcttcctc-aatatgctattgagaggaaaagg 708 ||||| ||||||||| ||||||||||||||||||| ||||||| ||||||||| ||||| Sbjct: 160 tttggatacaaatcgtgagaatgtatattcttcctcaaatatgccattgagaggtaaagg 101 Query: 709 att 711 ||| Sbjct: 100 att 98 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/64 (87%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||| ||||||||||||||||| ||| ||||||||||| |||||| |||||| ||| Sbjct: 314 gaagatctagttacgattggaaataaac--ttttgtatctttatccatgtatccttgact 257 Query: 544 cata 547 |||| Sbjct: 256 cata 253 Score = 44.1 bits (22), Expect = 0.63 Identities = 28/30 (93%) Strand = Plus / Minus Query: 236 taacatctatgtcagcttttctatttgaat 265 |||||||||||||||||||| ||| ||||| Sbjct: 559 taacatctatgtcagcttttttatctgaat 530
>gb|AY727223.1| Pseudotrillium rivale tRNA-Gly (trnG), intron; chloroplast Length = 674 Score = 147 bits (74), Expect = 6e-32 Identities = 83/86 (96%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 674 ttatagtcgacgttggttgatcatttttaacgtctctaattcaaaaccgaacatgaaatt 615 Query: 197 ttgatttcattcggctcctttatgga 222 || |||||||||||||||||||||| Sbjct: 614 tttctttcattcggctcctttatgga 589 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| Sbjct: 428 gatcctgaggaaaagaatttggtttccaccgagcagaaacaatatgccgatggttctagt 369 Query: 432 aaaccaaaactatcgttttttagcta 457 |||||||||| | |||||| |||||| Sbjct: 368 aaaccaaaaccaccgttttctagcta 343 Score = 69.9 bits (35), Expect = 1e-08 Identities = 57/63 (90%), Gaps = 1/63 (1%) Strand = Plus / Minus Query: 650 tttgggtacaaatcgccagaatgtatattcttcctc-aatatgctattgagaggaaaagg 708 ||||| ||||||||| ||||||||||||||||||| ||||||| ||||||||| ||||| Sbjct: 154 tttggatacaaatcgtgagaatgtatattcttcctcaaatatgccattgagaggtaaagg 95 Query: 709 att 711 ||| Sbjct: 94 att 92 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/64 (87%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||| ||||||||||||||||| ||| ||||||||||| |||||| |||||| ||| Sbjct: 308 gaagatctagttacgattggaaataaac--ttttgtatctttatccatgtatccttgact 251 Query: 544 cata 547 |||| Sbjct: 250 cata 247 Score = 44.1 bits (22), Expect = 0.63 Identities = 28/30 (93%) Strand = Plus / Minus Query: 236 taacatctatgtcagcttttctatttgaat 265 |||||||||||||||||||| ||| ||||| Sbjct: 553 taacatctatgtcagcttttttatctgaat 524
>gb|AY727505.1| Hibiscus macrophyllus trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1765 Score = 147 bits (74), Expect = 6e-32 Identities = 83/86 (96%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1765 ttatagtcgacgttgattcattatttttaacgtctctaattcaaaaccgaacatgaaatt 1706 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 1705 ttggtttcattcggctcctttatgga 1680 Score = 52.0 bits (26), Expect = 0.003 Identities = 77/94 (81%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||| ||||||| |||||| ||| ||| ||||||| Sbjct: 1402 atccttaggaaaagcattttgtttcccccgagctaaaacaagatgtaaatgtctctagta 1343 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||||||| |||||||| ||||||||| ||||| Sbjct: 1342 aaccaaagttatcgtttaatagctattttgcttc 1309 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 483 agaagatttagttacgattggaaatcaactttt 515 ||||||||||||||||||| ||||| ||||||| Sbjct: 1262 agaagatttagttacgattagaaataaactttt 1230 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 667 agaatgtatattcttcctcaa 687 ||||||||||||||||||||| Sbjct: 1031 agaatgtatattcttcctcaa 1011
>gb|L02941.1|MZETRNA Zea mays chloroplast transfer RNA-Gly (tRNA-Gly) gene, tRNA-Gly pseudogene,transfer RNA-fMet initiator (tRNA-fMet) gene Length = 874 Score = 141 bits (71), Expect = 4e-30 Identities = 71/71 (100%) Strand = Plus / Plus Query: 77 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 804 atacagaatggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctagggg 863 Query: 137 ttatagtcgac 147 ||||||||||| Sbjct: 864 ttatagtcgac 874
>gb|AY727506.1| Hibiscus mechowii trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1767 Score = 139 bits (70), Expect = 1e-29 Identities = 82/86 (95%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1767 ttatagtcgacgttgattcattattttgaacgtctctaattcaaaaccgaacatgaaatt 1708 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 1707 ttggtttcattcggctcctttatgga 1682 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| |||||| ||| ||| ||||||| Sbjct: 1446 atccttaggaaaagcattttgtttccaccgagctaaaacaagatgtaaatgtctctagta 1387 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||||||| |||||||| ||||||||| ||||| Sbjct: 1386 aaccaaagttatcgtttaatagctattttgcttc 1353 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 651 ttgggtacaaatcgccagaatgtatattcttcctcaa 687 |||| |||||||| | ||||||||||||||||||||| Sbjct: 1106 ttggatacaaatcacgagaatgtatattcttcctcaa 1070 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaactttt 515 |||||||||||||||||| ||||| ||||||| Sbjct: 1310 gaagatttagttacgattagaaataaactttt 1279
>gb|AY727504.1| Hibiscus cannabinus trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1902 Score = 139 bits (70), Expect = 1e-29 Identities = 82/86 (95%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1902 ttatagtcgacgttgattcattattttgaacgtctctaattcaaaaccgaacatgaaatt 1843 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 1842 ttggtttcattcggctcctttatgga 1817 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 651 ttgggtacaaatcgccagaatgtatattcttcctcaa 687 |||| |||||||| | ||||||||||||||||||||| Sbjct: 1136 ttggatacaaatcacgagaatgtatattcttcctcaa 1100 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaactttt 515 |||||||||||||||||| ||||| ||||||| Sbjct: 1443 gaagatttagttacgattagaaataaactttt 1412
>dbj|AB020794.1| Abies sachalinensis chloroplast DNA, trnS, psaM and trnG genes region Length = 2632 Score = 139 bits (70), Expect = 1e-29 Identities = 119/134 (88%), Gaps = 6/134 (4%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2420 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 2361 Query: 148 gttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcatt 207 ||||||| || || | |||||||||| |||||||||||||| ||| || ||||| Sbjct: 2360 ----attgatta--ttaaatgcctctaattcagaaccgaacatgaaaatttcatgtcatt 2307 Query: 208 cggctcctttatgg 221 ||||||||| |||| Sbjct: 2306 cggctccttcatgg 2293
>dbj|AB020790.1| Abies homolepis chloroplast DNA, trnS, psaM and trnG genes region Length = 2681 Score = 139 bits (70), Expect = 1e-29 Identities = 119/134 (88%), Gaps = 6/134 (4%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2467 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 2408 Query: 148 gttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcatt 207 ||||||| || || | |||||||||| |||||||||||||| ||| || ||||| Sbjct: 2407 ----attgatta--ttaaatgcctctaattcagaaccgaacatgaaaatttcatgtcatt 2354 Query: 208 cggctcctttatgg 221 ||||||||| |||| Sbjct: 2353 cggctccttcatgg 2340
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 135 bits (68), Expect = 2e-28 Identities = 207/247 (83%), Gaps = 11/247 (4%) Strand = Plus / Minus Query: 369 agagatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttct 428 |||||||| |||||||| |||| |||||||| | ||| ||||||||| |||| |||| Sbjct: 23509213 agagatcccgaggaaaataattaggtttccatctagcataaacaatataatgatgattct 23509154 Query: 429 agtaaaccaaaactatcgtttttta-gctatttggcttccttatccttt-----aacaaa 482 ||||||| ||||||| | || |||| |||| |||| || ||| |||||| |||||| Sbjct: 23509153 agtaaactaaaactacctttgtttaagctacttggatttcttttccttttctttaacaaa 23509094 Query: 483 agaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttac 542 | |||||||||||||||||| |||| | |||| | ||||||| |||||||||||||||| Sbjct: 23509093 acaagatttagttacgattgaaaataa--ttttctttatcttcttccatagatcctttac 23509036 Query: 543 tcatattttcaaaattggaatacttaaatccaatgcaaaattatgcttcgcgactc-tgt 601 ||||||||| |||||||| |||||| ||| ||||||||||||||||||| ||||| ||| Sbjct: 23509035 tcatatttttaaaattgg-atactt-aatacaatgcaaaattatgcttcctgactcttgt 23508978 Query: 602 actcata 608 ||||||| Sbjct: 23508977 actcata 23508971
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 135 bits (68), Expect = 2e-28 Identities = 207/247 (83%), Gaps = 11/247 (4%) Strand = Plus / Minus Query: 369 agagatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttct 428 |||||||| |||||||| |||| |||||||| | ||| ||||||||| |||| |||| Sbjct: 69606 agagatcccgaggaaaataattaggtttccatctagcataaacaatataatgatgattct 69547 Query: 429 agtaaaccaaaactatcgtttttta-gctatttggcttccttatccttt-----aacaaa 482 ||||||| ||||||| | || |||| |||| |||| || ||| |||||| |||||| Sbjct: 69546 agtaaactaaaactacctttgtttaagctacttggatttcttttccttttctttaacaaa 69487 Query: 483 agaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttac 542 | |||||||||||||||||| |||| | |||| | ||||||| |||||||||||||||| Sbjct: 69486 acaagatttagttacgattgaaaataa--ttttctttatcttcttccatagatcctttac 69429 Query: 543 tcatattttcaaaattggaatacttaaatccaatgcaaaattatgcttcgcgactc-tgt 601 ||||||||| |||||||| |||||| ||| ||||||||||||||||||| ||||| ||| Sbjct: 69428 tcatatttttaaaattgg-atactt-aatacaatgcaaaattatgcttcctgactcttgt 69371 Query: 602 actcata 608 ||||||| Sbjct: 69370 actcata 69364
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 135 bits (68), Expect = 2e-28 Identities = 207/247 (83%), Gaps = 11/247 (4%) Strand = Plus / Minus Query: 369 agagatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttct 428 |||||||| |||||||| |||| |||||||| | ||| ||||||||| |||| |||| Sbjct: 129110 agagatcccgaggaaaataattaggtttccatctagcataaacaatataatgatgattct 129051 Query: 429 agtaaaccaaaactatcgtttttta-gctatttggcttccttatccttt-----aacaaa 482 ||||||| ||||||| | || |||| |||| |||| || ||| |||||| |||||| Sbjct: 129050 agtaaactaaaactacctttgtttaagctacttggatttcttttccttttctttaacaaa 128991 Query: 483 agaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttac 542 | |||||||||||||||||| |||| | |||| | ||||||| |||||||||||||||| Sbjct: 128990 acaagatttagttacgattgaaaataa--ttttctttatcttcttccatagatcctttac 128933 Query: 543 tcatattttcaaaattggaatacttaaatccaatgcaaaattatgcttcgcgactc-tgt 601 ||||||||| |||||||| |||||| ||| ||||||||||||||||||| ||||| ||| Sbjct: 128932 tcatatttttaaaattgg-atactt-aatacaatgcaaaattatgcttcctgactcttgt 128875 Query: 602 actcata 608 ||||||| Sbjct: 128874 actcata 128868
>gb|AY727518.1| Liriodendron tulipifera trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1484 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || |||||||||||||||||||||||||||||||||||| | Sbjct: 1484 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaaccgaacatgaaact 1425 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 1424 ttggtttcattcggctcctttatgga 1399 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 236 taacatctatgtcagcttttctatttgaatggaaccaaagctctctgctttctagatgat 295 |||||||||||||||||||||| | |||||| | ||||| | | ||||||||||||||| Sbjct: 1275 taacatctatgtcagcttttctgtctgaatgcatccaaaacgatttgctttctagatgat 1216 Query: 296 cc 297 || Sbjct: 1215 cc 1214 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/134 (82%), Gaps = 6/134 (4%) Strand = Plus / Minus Query: 339 tctacttacttcgttccctaatttcattcaagaga-tcctgaggaaaagaattgggtttc 397 |||| ||||||||||||||| || | ||| |||| || |||||||||||||| |||| Sbjct: 1183 tctagttacttcgttccctatttctactcacgagaatcttgaggaaaagaattttctttc 1124 Query: 398 caccgagctgaaacaatatg-cg----gatggttctagtaaaccaaaactatcgtttttt 452 ||||||||||||| |||||| || ||||| |||||||||| ||| ||||||| | Sbjct: 1123 caccgagctgaaaaaatatgtcgatgcgatggctctagtaaactaaagtcatcgtttaat 1064 Query: 453 agctatttggcttc 466 |||||||||||||| Sbjct: 1063 agctatttggcttc 1050 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/60 (86%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||| ||||||||||| ||||| |||||| | |||||||||||| ||||||||||| Sbjct: 1023 gaagatctagttacgattagaaatacactttt--ggatcttcatccatggatcctttact 966 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 649 ttttgggtacaaatcgccagaatgtatattcttcctc 685 |||||| |||||||| | ||||||||||||||||||| Sbjct: 865 ttttggatacaaatcacgagaatgtatattcttcctc 829
>gb|AY727517.1| Magnolia tripetala trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1463 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || |||||||||||||||||||||||||||||||||||| | Sbjct: 1463 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaaccgaacatgaaact 1404 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 1403 ttggtttcattcggctcctttatgga 1378 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/60 (90%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||| ||||||||||| ||||| || ||||||||||||||||||| ||||||||||| Sbjct: 1004 gaagatctagttacgattagaaat--acatttttgtatcttcatccatggatcctttact 947 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatg 417 |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 1131 atcctgaggaaaagaattttctttccaccgagctgaaaaaatatg 1087 Score = 50.1 bits (25), Expect = 0.010 Identities = 50/57 (87%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 656 tacaaatcgccagaatgtatattcttcctc-aatatgctattgagaggaaaaggatt 711 |||||||| | ||||||||||||||||||| |||||| |||||| || |||||||| Sbjct: 841 tacaaatcacgagaatgtatattcttcctcgaatatggcattgaggggtaaaggatt 785 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 1258 taacatctatgtcagcttttctgtctgaatg 1228
>gb|AY727516.1| Magnolia acuminata trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1460 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || |||||||||||||||||||||||||||||||||||| | Sbjct: 1460 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaaccgaacatgaaact 1401 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 1400 ttggtttcattcggctcctttatgga 1375 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/60 (90%), Gaps = 2/60 (3%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||| ||||||||||| ||||| || ||||||||||||||||||| ||||||||||| Sbjct: 1002 gaagatctagttacgattagaaat--acatttttgtatcttcatccatggatcctttact 945 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatg 417 |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 1127 atcctgaggaaaagaattttctttccaccgagctgaaaaaatatg 1083 Score = 50.1 bits (25), Expect = 0.010 Identities = 50/57 (87%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 656 tacaaatcgccagaatgtatattcttcctc-aatatgctattgagaggaaaaggatt 711 |||||||| | ||||||||||||||||||| |||||| |||||| || |||||||| Sbjct: 842 tacaaatcacgagaatgtatattcttcctcgaatatggcattgaggggtaaaggatt 786
>gb|AY727509.1| Solanum physalifolium trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1383 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||| | || ||||||||||||||||||||||||||||||||||||||| | Sbjct: 1383 ttatagtcgacgtcgattcattatttttaacgtctctaattcaaaaccgaacatgaaact 1324 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 1323 ttggtttcattcggctcctttatgga 1298 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||| ||| |||||||||||||| |||||||||| |||| |||||| Sbjct: 1104 gatcctgaggaaaaggattttgtttccaccgagctaaaacaatatgttgatgtctctagt 1045 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 1044 aaaccaaagtcatcgtttaatagctattttgcttc 1010 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 983 gaagatttagttacgattagaaatcaac---tttctatcttcatccatggatcctttatt 927 Query: 544 cata 547 |||| Sbjct: 926 cata 923 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 694 attgagaggaaaaggatttaat 715 |||||||||||||||||||||| Sbjct: 795 attgagaggaaaaggatttaat 774 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 1235 taacatctatgtcagctttt 1216
>gb|AY727508.1| Solanum americanum trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1384 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||| | || ||||||||||||||||||||||||||||||||||||||| | Sbjct: 1384 ttatagtcgacgtcgattcattatttttaacgtctctaattcaaaaccgaacatgaaact 1325 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 1324 ttggtttcattcggctcctttatgga 1299 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||| ||| |||||||||||||| |||||||||| |||| |||||| Sbjct: 1104 gatcctgaggaaaaggattttgtttccaccgagctaaaacaatatgttgatgtctctagt 1045 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 1044 aaaccaaagtcatcgtttaatagctattttgcttc 1010 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 983 gaagatttagttacgattagaaatcaac---tttctatcttcatccatggatcctttatt 927 Query: 544 cata 547 |||| Sbjct: 926 cata 923 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 694 attgagaggaaaaggatttaat 715 |||||||||||||||||||||| Sbjct: 795 attgagaggaaaaggatttaat 774 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 1235 taacatctatgtcagctttt 1216
>gb|AY727507.1| Solanum ptychanthum trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1384 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||| | || ||||||||||||||||||||||||||||||||||||||| | Sbjct: 1384 ttatagtcgacgtcgattcattatttttaacgtctctaattcaaaaccgaacatgaaact 1325 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 1324 ttggtttcattcggctcctttatgga 1299 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 ||||||||||||||| ||| |||||||||||||| |||||||||| |||| |||||| Sbjct: 1104 gatcctgaggaaaaggattttgtttccaccgagctaaaacaatatgttgatgtctctagt 1045 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 1044 aaaccaaagtcatcgtttaatagctattttgcttc 1010 Score = 67.9 bits (34), Expect = 4e-08 Identities = 57/64 (89%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 983 gaagatttagttacgattagaaatcaac---tttctatcttcatccatggatcctttatt 927 Query: 544 cata 547 |||| Sbjct: 926 cata 923 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 1235 taacatctatgtcagctttt 1216
>dbj|AB020796.2| Tsuga diversifolia chloroplast DNA, trnS, psaM and trnG genes region Length = 2523 Score = 131 bits (66), Expect = 3e-27 Identities = 118/134 (88%), Gaps = 6/134 (4%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2343 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 2284 Query: 148 gttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcatt 207 ||||||| || || | |||||||||| |||||||||||| | ||| || ||||| Sbjct: 2283 ----attgatta--ttcaatgcctctaattcagaaccgaacatgagaatttcatgtcatt 2230 Query: 208 cggctcctttatgg 221 ||||||||| |||| Sbjct: 2229 cggctccttcatgg 2216 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 ctttctagatgatccttataga 304 |||||||||||||||||||||| Sbjct: 1995 ctttctagatgatccttataga 1974
>dbj|AB020788.1| Abies veitchii chloroplast DNA, trnS, psaM and trnG genes region Length = 2690 Score = 131 bits (66), Expect = 3e-27 Identities = 118/134 (88%), Gaps = 6/134 (4%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2477 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 2418 Query: 148 gttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcatt 207 ||||||| || || | |||| ||||| |||||||||||||| ||| || ||||| Sbjct: 2417 ----attgatta--ttaaatgcctctgattcagaaccgaacatgaaaatttcatgtcatt 2364 Query: 208 cggctcctttatgg 221 ||||||||| |||| Sbjct: 2363 cggctccttcatgg 2350
>dbj|AB020786.1| Abies firma chloroplast DNA, trnS, psaM and trnG genes region Length = 2687 Score = 131 bits (66), Expect = 3e-27 Identities = 116/132 (87%), Gaps = 6/132 (4%) Strand = Plus / Minus Query: 90 cgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgacgt 149 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2472 cgggtagcgggaatcnaacccgcatcgttagcttggaaggctaggggttatagtcgac-- 2415 Query: 150 tggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcg 209 ||||||| || || | |||||||||| |||||||||||||| ||| || ||||||| Sbjct: 2414 --attgatta--ttaaatgcctctaattcanaaccgaacatgaaaatttcatgtcattcg 2359 Query: 210 gctcctttatgg 221 ||||||| |||| Sbjct: 2358 gctccttcatgg 2347
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 125 bits (63), Expect = 2e-25 Identities = 118/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgacg 148 |||||||| ||||||||||||| |||| |||||||||||||||| ||||||||||||||| Sbjct: 61690 gcgggtagtgggaatcgaacccacatcattagcttggaaggctaagggttatagtcgacg 61631 Query: 149 ttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcattc 208 || || |||| | ||| || ||||| |||||||||||| |||||||||| || |||| | Sbjct: 61630 tt--tttatta-tattatcgcctctatttcaaaaccgaatatgaaattttaatatcatac 61574 Query: 209 ggctcctttatgga 222 |||||||||||||| Sbjct: 61573 ggctcctttatgga 61560 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Plus Query: 89 gcgggtagcgggaatcgaacccgcat 114 |||||||||||||||||||||||||| Sbjct: 41093 gcgggtagcgggaatcgaacccgcat 41118 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 176 ttcaaaaccgaacatgaaattttgatttcattcggct 212 |||||||||| |||||||||||| ||||||| ||||| Sbjct: 34428 ttcaaaaccgtacatgaaattttcatttcatacggct 34392
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 125 bits (63), Expect = 2e-25 Identities = 115/131 (87%), Gaps = 1/131 (0%) Strand = Plus / Minus Query: 86 ggagcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcg 145 |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct: 15396 ggagcgggtagcgggaatcgaacccgcatcattagcttggaaggctaagggttatagtcg 15337 Query: 146 acgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttca 205 | | | || | | || ||||| ||||||||||| |||||||||||||| | | ||||| Sbjct: 15336 atgct-attaagtcttattaacatctctaattcagaaccgaacatgaaaatctcttttca 15278 Query: 206 ttcggctcctt 216 ||||||||||| Sbjct: 15277 ttcggctcctt 15267 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Plus Query: 89 gcgggtagcgggaatcgaacccgcat 114 ||||||||||||||| |||||||||| Sbjct: 34148 gcgggtagcgggaattgaacccgcat 34173
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 123 bits (62), Expect = 8e-25 Identities = 117/134 (87%), Gaps = 6/134 (4%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9470 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 9411 Query: 148 gttggttgattatttttaacgtctctaattcaaaaccgaacatgaaattttgatttcatt 207 ||||||| || || | |||||||||| |||||||||||| | ||| || ||||| Sbjct: 9410 ----attgatta--ttcaatgcctctaattcagaaccgaacatgagaatttcatgtcatt 9357 Query: 208 cggctcctttatgg 221 | ||||||| |||| Sbjct: 9356 cagctccttcatgg 9343 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||||||||||| |||||||||||||| Sbjct: 76960 gcgggtagcggggatcgaacccgcatc 76986
>gb|AY727221.1| Trilisa paniculata tRNA-Gly (trnG), intron; chloroplast Length = 709 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||| | || || |||||||||||||||||||||||||||||||||||| | Sbjct: 709 ttatagtcgacgtcgattcatcatttttaacgtctctaattcaaaaccgaacatgaaact 650 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 649 ttggtttcattcggctcctttatgga 624 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 567 taacatctatgtcagctttt 548
>gb|AY727220.1| Carphephorus corymbosus tRNA-Gly (trnG), intron; chloroplast Length = 709 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||| | || || |||||||||||||||||||||||||||||||||||| | Sbjct: 709 ttatagtcgacgtcgattcatcatttttaacgtctctaattcaaaaccgaacatgaaact 650 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 649 ttggtttcattcggctcctttatgga 624 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 567 taacatctatgtcagctttt 548
>gb|AY727219.1| Eupatorium hyssopifolium tRNA-Gly (trnG), intron; chloroplast Length = 717 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||| | || || |||||||||||||||||||||||||||||||||||| | Sbjct: 717 ttatagtcgacgtcgattcatcatttttaacgtctctaattcaaaaccgaacatgaaact 658 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 657 ttggtttcattcggctcctttatgga 632 Score = 44.1 bits (22), Expect = 0.63 Identities = 52/62 (83%) Strand = Plus / Minus Query: 374 tcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaa 433 |||| |||||||| ||| | ||||||||||||| ||| |||||| |||| |||||||| Sbjct: 429 tcctaaggaaaaggatttgatttccaccgagctaaaataatatgtcgatgtctctagtaa 370 Query: 434 ac 435 || Sbjct: 369 ac 368 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 560 taacatctatgtcagctttt 541 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaat 507 |||||||||||||||||| ||||| Sbjct: 305 gaagatttagttacgattagaaat 282
>gb|AY727218.1| Eupatorium capillifolium tRNA-Gly (trnG) gene, intron; chloroplast Length = 725 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||| | || || |||||||||||||||||||||||||||||||||||| | Sbjct: 725 ttatagtcgacgtcgattcatcatttttaacgtctctaattcaaaaccgaacatgaaact 666 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 665 ttggtttcattcggctcctttatgga 640 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 560 taacatctatgtcagctttt 541 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaat 507 |||||||||||||||||| ||||| Sbjct: 305 gaagatttagttacgattagaaat 282
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 119 bits (60), Expect = 1e-23 Identities = 60/60 (100%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9656 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 9597 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 168 gtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgg 221 |||||||||||| |||||||||||| | ||| || |||||||||||||| |||| Sbjct: 9582 gtctctaattcagaaccgaacatgagaatttaatgtcattcggctccttcatgg 9529 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 89 gcgggtagcgggaatcgaacccgcatc 115 |||||||||||| |||||||||||||| Sbjct: 79090 gcgggtagcggggatcgaacccgcatc 79116
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 117 bits (59), Expect = 5e-23 Identities = 62/63 (98%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 72202 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaagggttatagtcgac 72143 Query: 148 gtt 150 ||| Sbjct: 72142 gtt 72140 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 165 aacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctccttta 218 ||||||||||||||||||| |||| ||||| ||| |||||||| ||||||||| Sbjct: 72131 aacgtctctaattcaaaactgaacgtgaaacttttgtttcattcagctccttta 72078 Score = 52.0 bits (26), Expect = 0.003 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 ||||||||||||||||||||||| ||| |||| | |||| | ||| | ||||||||||| Sbjct: 71765 gaagatttagttacgattggaaa-caaattttctatatcattctccctggatcctttact 71707 Query: 544 catatt 549 |||||| Sbjct: 71706 catatt 71701 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgc 112 |||| ||||||||||||||||||| Sbjct: 99963 gcggatagcgggaatcgaacccgc 99940
>gb|AY500742.1| Physocarpus opulifolius voucher JSh1015 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1372 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatgga 86 Score = 54.0 bits (27), Expect = 7e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || |||| ||||||| Sbjct: 272 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcgatgtctctagta 331 Query: 433 aaccaaa 439 ||||||| Sbjct: 332 aaccaaa 338 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Plus Query: 651 ttgggtacaaatcgccagaatgtatattcttcctc 685 |||| |||||||| | ||||||||||||||||||| Sbjct: 539 ttggatacaaatcacgagaatgtatattcttcctc 573 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtatgaatg 174 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 519 tatcttcatccatagatcctttactcata 547 |||||| |||||| ||||||||||||||| Sbjct: 424 tatctttatccatggatcctttactcata 452
>gb|AY500741.1| Prunus caroliniana voucher E.Lickey tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1361 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatgga 86 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||||||| |||||||||||||| ||||||| || |||| ||||||| Sbjct: 271 atccttaggaaaagaattttgtttccaccgagctaaaacaatttgtcgatgtctctagta 330 Query: 433 aaccaaa 439 ||||||| Sbjct: 331 aaccaaa 337 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 142 taacatctatgtcagcttttctgtctgaatg 172
>gb|AY500740.1| Prunus laurocerasus voucher JSh1014 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1344 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatgga 86 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||||||| |||||||||||||| ||||||| || |||| ||||||| Sbjct: 273 atccttaggaaaagaattttgtttccaccgagctaaaacaatttgtcgatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AY500739.1| Prunus virginiana voucher JSh871 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1353 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatgga 86 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||||||| |||||||||||||| ||||||| || |||| ||||||| Sbjct: 272 atccttaggaaaagaattttgtttccaccgagctaaaacaatttgtcgatgtctctagta 331 Query: 433 aaccaaa 439 ||||||| Sbjct: 332 aaccaaa 338 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 143 taacatctatgtcagcttttctgtctgaatg 173
>gb|AY500738.1| Prunus serotina voucher JSh1013 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1349 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatgga 222 ||| |||||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatgga 86 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||||||| |||||||||||||| ||||||| || |||| ||||||| Sbjct: 272 atccttaggaaaagaattttgtttccaccgagctaaaacaatttgtcgatgtctctagta 331 Query: 433 aaccaaa 439 ||||||| Sbjct: 332 aaccaaa 338 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 143 taacatctatgtcagcttttctgtctgaatg 173
>gb|AY727513.1| Minuartia uniflora trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1353 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 |||||||||||| ||||| || |||||||||||| ||||||||||||||||||||||| | Sbjct: 1353 ttatagtcgacgctggtttatgatttttaacgtcgctaattcaaaaccgaacatgaaact 1294 Query: 197 ttgatttcattcggctcctttatgga 222 || |||||||||||||||||||||| Sbjct: 1293 ttagtttcattcggctcctttatgga 1268
>gb|AY500737.1| Prunus pensylvanica voucher JSh865 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1093 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 272 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 331 Query: 433 aaccaaa 439 ||||||| Sbjct: 332 aaccaaa 338 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 143 taacatctatgtcagcttttctgtctgaatg 173 Score = 44.1 bits (22), Expect = 0.63 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 651 ttgggtacaaatcgccagaatgtatattcttcctc-aatatgctattgagaggaaaagga 709 |||| |||||||| | |||||||||||| |||||| ||| | |||||||||| |||||| Sbjct: 558 ttggatacaaatcacgagaatgtatattattcctcgaattttttattgagaggtaaagga 617 Query: 710 tt 711 || Sbjct: 618 tt 619
>gb|AY500736.1| Prunus mahaleb voucher JSh966 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1094 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 272 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 331 Query: 433 aaccaaa 439 ||||||| Sbjct: 332 aaccaaa 338 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 143 taacatctatgtcagcttttctgtctgaatg 173 Score = 44.1 bits (22), Expect = 0.63 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 651 ttgggtacaaatcgccagaatgtatattcttcctc-aatatgctattgagaggaaaagga 709 |||| |||||||| | |||||||||||| |||||| ||| | |||||||||| |||||| Sbjct: 557 ttggatacaaatcacgagaatgtatattattcctcgaattttttattgagaggtaaagga 616 Query: 710 tt 711 || Sbjct: 617 tt 618
>gb|AY500735.1| Prunus fasciculata voucher DPRU2033 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1397 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 273 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AY500734.1| Prunus tenella voucher DPRU2225.6 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1414 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 145 taacatctatgtcagcttttctgtctgaatg 175
>gb|AY500733.1| Prunus persica voucher JSh992 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1129 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 271 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 330 Query: 433 aaccaaa 439 ||||||| Sbjct: 331 aaccaaa 337 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 142 taacatctatgtcagcttttctgtctgaatg 172
>gb|AY500732.1| Prunus mira voucher DPRU2228.3 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1129 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 271 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 330 Query: 433 aaccaaa 439 ||||||| Sbjct: 331 aaccaaa 337 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 142 taacatctatgtcagcttttctgtctgaatg 172
>gb|AY500731.1| Prunus davidiana voucher DPRU581 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1422 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 273 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AY500730.1| Prunus dulcis voucher DPRU1463.5 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1410 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 139 taacatctatgtcagcttttctgtctgaatg 169 Score = 44.1 bits (22), Expect = 0.63 Identities = 37/42 (88%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaat 414 ||||| |||||||| ||| |||||||||||||| ||||||| Sbjct: 268 atccttaggaaaagcattttgtttccaccgagctaaaacaat 309
>gb|AY500729.1| Prunus tomentosa voucher DPRU2316.4 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1446 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 272 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 331 Query: 433 aaccaaa 439 ||||||| Sbjct: 332 aaccaaa 338 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 143 taacatctatgtcagcttttctgtctgaatg 173
>gb|AY500728.1| Prunus pumila voucher Horn 2001-02 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1420 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 273 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AY500727.1| Prunus glandulosa voucher DPRU403.1 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1418 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 273 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AY500726.1| Prunus mume voucher DPRU1588 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1420 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 271 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 330 Query: 433 aaccaaa 439 ||||||| Sbjct: 331 aaccaaa 337 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 142 taacatctatgtcagcttttctgtctgaatg 172
>gb|AY500725.1| Prunus armeniaca voucher DPRU1372.2 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1415 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 272 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 331 Query: 433 aaccaaa 439 ||||||| Sbjct: 332 aaccaaa 338 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 143 taacatctatgtcagcttttctgtctgaatg 173
>gb|AY500724.1| Prunus mandshurica voucher DPRU2311.1 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1418 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 274 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 333 Query: 433 aaccaaa 439 ||||||| Sbjct: 334 aaccaaa 340 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 145 taacatctatgtcagcttttctgtctgaatg 175
>gb|AY500723.1| Prunus simonii voucher DPRU545 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1415 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 272 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 331 Query: 433 aaccaaa 439 ||||||| Sbjct: 332 aaccaaa 338 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 143 taacatctatgtcagcttttctgtctgaatg 173
>gb|AY500722.1| Prunus salicina voucher DPRU791 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1419 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 278 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 337 Query: 433 aaccaaa 439 ||||||| Sbjct: 338 aaccaaa 344 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 143 taacatctatgtcagcttttctgtctgaatg 173
>gb|AY500721.1| Prunus cerasifera voucher DPRU563 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1442 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 277 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 336 Query: 433 aaccaaa 439 ||||||| Sbjct: 337 aaccaaa 343 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 148 taacatctatgtcagcttttctgtctgaatg 178
>gb|AY500720.1| Prunus spinosa voucher DPRU2289.22 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1418 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 275 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 334 Query: 433 aaccaaa 439 ||||||| Sbjct: 335 aaccaaa 341 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 146 taacatctatgtcagcttttctgtctgaatg 176
>gb|AY500719.1| Prunus domestica voucher 350 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1417 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 277 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 336 Query: 433 aaccaaa 439 ||||||| Sbjct: 337 aaccaaa 343 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 148 taacatctatgtcagcttttctgtctgaatg 178
>gb|AY500718.1| Prunus insititia voucher DPRU2054 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1417 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 277 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 336 Query: 433 aaccaaa 439 ||||||| Sbjct: 337 aaccaaa 343 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 148 taacatctatgtcagcttttctgtctgaatg 178
>gb|AY500717.1| Prunus subcordata voucher J.Syring tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1425 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 54.0 bits (27), Expect = 7e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| |||||||| Sbjct: 271 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtttctagta 330 Query: 433 aaccaaa 439 ||||||| Sbjct: 331 aaccaaa 337 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 142 taacatctatgtcagcttttctgtctgaatg 172
>gb|AY500716.1| Prunus texana voucher JSh924 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1416 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 273 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AY500715.1| Prunus maritima var. gravesii voucher JSh002 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1425 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 273 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AY500714.1| Prunus maritima voucher JSh877 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1425 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 273 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AY500713.1| Prunus geniculata voucher JSh898 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1410 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 273 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AY500712.1| Prunus alleghaniensis voucher JSh837 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1416 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 273 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AY500711.1| Prunus alleghaniensis var. davisii voucher G.Schmidt tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1417 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 273 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AY500710.1| Prunus nigra voucher JSh979 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1417 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 273 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AY500709.1| Prunus umbellata voucher JSh774 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1417 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 273 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AY500708.1| Prunus gracilis voucher JSh936 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1417 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 273 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AY500707.1| Prunus munsoniana voucher JSh810 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1417 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 273 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AY500706.1| Prunus angustifolia voucher JSh785 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1417 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 ||| |||||||||||||||||||| Sbjct: 61 ttggtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 273 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 332 Query: 433 aaccaaa 439 ||||||| Sbjct: 333 aaccaaa 339 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 144 taacatctatgtcagcttttctgtctgaatg 174
>gb|AC124958.13| Medicago truncatula clone mth2-18i11, complete sequence Length = 120562 Score = 107 bits (54), Expect = 5e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 89 gcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgacg 148 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 25737 gcgggtagcgggaatcgaacccacatcgttagcttggaaggctaagggttatagtcgacg 25796 Query: 149 tt 150 || Sbjct: 25797 tt 25798 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 165 aacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctccttta 218 |||||||||||||||||| ||||| ||||| ||| |||||||| ||||||||| Sbjct: 25807 aacgtctctaattcaaaatcgaacgtgaaacttttgtttcattcagctccttta 25860 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 484 gaagatttagttacgattggaaa 506 ||||||||||||||||||||||| Sbjct: 26174 gaagatttagttacgattggaaa 26196
>gb|AC144474.22| Medicago truncatula clone mth2-15l5, complete sequence Length = 142202 Score = 107 bits (54), Expect = 5e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 89 gcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgacg 148 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 94826 gcgggtagcgggaatcgaacccacatcgttagcttggaaggctaagggttatagtcgacg 94767 Query: 149 tt 150 || Sbjct: 94766 tt 94765 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 165 aacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctccttta 218 |||||||||||||||||| ||||| ||||| ||| |||||||| ||||||||| Sbjct: 94756 aacgtctctaattcaaaatcgaacgtgaaacttttgtttcattcagctccttta 94703 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaa 506 ||||||||||||||||||||||| Sbjct: 94389 gaagatttagttacgattggaaa 94367
>gb|AY727515.1| Minuartia glabra trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1297 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 |||||||||||| ||||| | |||||||||||| ||||||||||||||||||||||| | Sbjct: 1297 ttatagtcgacgctggtttctcatttttaacgtcgctaattcaaaaccgaacatgaaact 1238 Query: 197 ttgatttcattcggctcctttatgga 222 || |||||||||||||||||||||| Sbjct: 1237 ttagtttcattcggctcctttatgga 1212
>gb|AY500705.1| Prunus hortulana voucher JSh821 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1412 Score = 103 bits (52), Expect = 8e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 || |||||||||||||||||||| Sbjct: 61 tttgtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 274 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 333 Query: 433 aaccaaa 439 ||||||| Sbjct: 334 aaccaaa 340 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 145 taacatctatgtcagcttttctgtctgaatg 175
>gb|AY500704.1| Prunus mexicana voucher JSh919 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1411 Score = 103 bits (52), Expect = 8e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 || |||||||||||||||||||| Sbjct: 61 tttgtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 274 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 333 Query: 433 aaccaaa 439 ||||||| Sbjct: 334 aaccaaa 340 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 145 taacatctatgtcagcttttctgtctgaatg 175
>gb|AY500703.1| Prunus umbellata var. injucunda voucher JSh958 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1412 Score = 103 bits (52), Expect = 8e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 || |||||||||||||||||||| Sbjct: 61 tttgtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 274 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 333 Query: 433 aaccaaa 439 ||||||| Sbjct: 334 aaccaaa 340 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 145 taacatctatgtcagcttttctgtctgaatg 175
>gb|AY500702.1| Prunus rivularis voucher Endquist3372 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1417 Score = 103 bits (52), Expect = 8e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 || |||||||||||||||||||| Sbjct: 61 tttgtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 274 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 333 Query: 433 aaccaaa 439 ||||||| Sbjct: 334 aaccaaa 340 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 145 taacatctatgtcagcttttctgtctgaatg 175
>gb|AY500701.1| Prunus americana var. lanata voucher J.Beck4955 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1412 Score = 103 bits (52), Expect = 8e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 || |||||||||||||||||||| Sbjct: 61 tttgtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 274 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 333 Query: 433 aaccaaa 439 ||||||| Sbjct: 334 aaccaaa 340 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 145 taacatctatgtcagcttttctgtctgaatg 175
>gb|AY500700.1| Prunus americana voucher JSh038 tRNA-Gly (trnG) gene and trnS-trnG intergenic spacer, partial sequence; chloroplast Length = 1419 Score = 103 bits (52), Expect = 8e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 ||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||| | Sbjct: 1 ttatagtcgacgttgattcatcatttttaacgtctctaattcaaaactgaacgtgaaact 60 Query: 197 ttgatttcattcggctcctttatg 220 || |||||||||||||||||||| Sbjct: 61 tttgtttcattcggctcctttatg 84 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Plus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 ||||| |||||||| ||| |||||||||||||| ||||||| || ||| ||||||| Sbjct: 275 atccttaggaaaagcattttgtttccaccgagctaaaacaatttgtcaatgtctctagta 334 Query: 433 aaccaaa 439 ||||||| Sbjct: 335 aaccaaa 341 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 taacatctatgtcagcttttctatttgaatg 266 |||||||||||||||||||||| | |||||| Sbjct: 146 taacatctatgtcagcttttctgtctgaatg 176
>emb|X05917.1|CHPSATPC Pea plastid genes rps2, atpI, atpH, atpF, atpA, trnR and trnG coding for ribosomal protein S2, one CF(1) and three CF(O) subunits of ATP synthase and tRNA-Arg and tRNA-Gly Length = 5865 Score = 103 bits (52), Expect = 8e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgac 147 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 5806 agcgggtagcgggaatcgaacccgcatcattagcttggaaggctaagggttatagtcgac 5865
>gb|DQ352355.1| Altingia excelsa voucher E. A. Widjaja. s.n. tRNA-Gly (trnG) gene, intron; chloroplast Length = 641 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 641 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 583 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 395 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 336 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 335 aaagtcatcgtttaatagctattttgcttc 306 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||||||||||||||| Sbjct: 247 ttttctatcttcatccatggatcctttactcata 214
>gb|DQ352353.1| Liquidambar orientalis voucher Aksoy 5203 tRNA-Gly (trnG) gene, intron; chloroplast Length = 638 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 638 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 580 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 |||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||| Sbjct: 397 atcctgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagta 338 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||||||| ||||||| ||||||||| ||||| Sbjct: 337 aaccaaagtcatcgtttaatagctattttgcttc 304 Score = 56.0 bits (28), Expect = 2e-04 Identities = 56/64 (87%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| |||| || |||| ||||||||||||| ||||||||||| Sbjct: 277 gaagatttagttacgattagaaaaaaaacttttc-tatcttcatccatggatcctttact 219 Query: 544 cata 547 |||| Sbjct: 218 cata 215
>gb|DQ352352.1| Liquidambar orientalis voucher Aksoy 5204 tRNA-Gly (trnG) gene, intron; chloroplast Length = 638 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 638 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 580 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 |||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||| Sbjct: 397 atcctgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagta 338 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||||||| ||||||| ||||||||| ||||| Sbjct: 337 aaccaaagtcatcgtttaatagctattttgcttc 304 Score = 56.0 bits (28), Expect = 2e-04 Identities = 56/64 (87%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| |||| || |||| ||||||||||||| ||||||||||| Sbjct: 277 gaagatttagttacgattagaaaaaaaacttttc-tatcttcatccatggatcctttact 219 Query: 544 cata 547 |||| Sbjct: 218 cata 215
>gb|DQ352351.1| Liquidambar orientalis voucher WA 138656 tRNA-Gly (trnG) gene, intron; chloroplast Length = 639 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 639 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 581 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 |||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||| Sbjct: 397 atcctgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagta 338 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||||||| ||||||| ||||||||| ||||| Sbjct: 337 aaccaaagtcatcgtttaatagctattttgcttc 304 Score = 56.0 bits (28), Expect = 2e-04 Identities = 56/64 (87%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| |||| || |||| ||||||||||||| ||||||||||| Sbjct: 277 gaagatttagttacgattagaaaaaaaacttttc-tatcttcatccatggatcctttact 219 Query: 544 cata 547 |||| Sbjct: 218 cata 215
>gb|DQ352349.1| Liquidambar formosana voucher Ickert-Bond 1291 tRNA-Gly (trnG) gene, intron; chloroplast Length = 642 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 642 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 584 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 395 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 336 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 335 aaagtcatcgtttaatagctattttgcttc 306 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||||||||||||||| Sbjct: 247 ttttatatcttcatccatggatcctttactcata 214
>gb|DQ352348.1| Liquidambar macrophylla voucher Ickert-Bond 1383 tRNA-Gly (trnG) gene, intron; chloroplast Length = 639 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 639 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 581 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 |||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||| Sbjct: 399 atcctgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagta 340 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||||||| ||||||| ||||||||| ||||| Sbjct: 339 aaccaaagtcatcgtttaatagctattttgcttc 306 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||||||||||||||| Sbjct: 248 ttttctatcttcatccatggatcctttactcata 215
>gb|DQ352346.1| Liquidambar styraciflua voucher Wen 7169 tRNA-Gly (trnG) gene, intron; chloroplast Length = 639 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 639 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 581 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 |||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||| Sbjct: 398 atcctgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagta 339 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||||||| ||||||| ||||||||| ||||| Sbjct: 338 aaccaaagtcatcgtttaatagctattttgcttc 305 Score = 63.9 bits (32), Expect = 7e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| |||| || |||| ||||||||||||| ||||||||||| Sbjct: 278 gaagatttagttacgattagaaaaaaaaacttttctatcttcatccatggatcctttact 219 Query: 544 cata 547 |||| Sbjct: 218 cata 215
>gb|DQ352344.1| Liquidambar acalycina voucher WA 8590 tRNA-Gly (trnG) gene, intron; chloroplast Length = 642 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 642 taacgtctctaattcaaaaccgaacatgaaaatttggtttcattcggctcctttatgga 584 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 395 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 336 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 335 aaagtcatcgtttaatagctattttgcttc 306 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||||||||||||||| Sbjct: 247 ttttatatcttcatccatggatcctttactcata 214
>gb|DQ352343.1| Altingia sp. WP 227 tRNA-Gly (trnG) gene, intron; chloroplast Length = 642 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 642 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 584 Score = 63.9 bits (32), Expect = 7e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| |||| || |||| ||||||||||||| ||||||||||| Sbjct: 277 gaagatttagttacgattagaaaaaaaaacttttctatcttcatccatggatcctttact 218 Query: 544 cata 547 |||| Sbjct: 217 cata 214 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 393 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 334 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 333 aaagtcatcgtttaatagctattttgcttc 304
>gb|DQ352342.1| Altingia siamensis voucher Ickert-Bond 1280 tRNA-Gly (trnG) gene, intron; chloroplast Length = 644 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 644 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 586 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 395 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 336 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 335 aaagtcatcgtttaatagctattttgcttc 306 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||||||||||||||| Sbjct: 247 ttttctatcttcatccatggatcctttactcata 214
>gb|DQ352341.1| Altingia siamensis voucher Ickert-Bond 1281 tRNA-Gly (trnG) gene, intron; chloroplast Length = 643 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 643 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 585 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 395 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 336 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 335 aaagtcatcgtttaatagctattttgcttc 306 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||||||||||||||| Sbjct: 247 ttttctatcttcatccatggatcctttactcata 214
>gb|DQ352340.1| Altingia yunnanensis voucher Ickert-Bond 1295 tRNA-Gly (trnG) gene, intron; chloroplast Length = 636 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 636 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 578 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 |||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||| Sbjct: 396 atcctgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagta 337 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||||||| ||||||| ||||||||| ||||| Sbjct: 336 aaccaaagtcatcgtttaatagctattttgcttc 303 Score = 56.0 bits (28), Expect = 2e-04 Identities = 56/64 (87%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| |||| || |||| ||||||||||||| ||||||||||| Sbjct: 276 gaagatttagttacgattagaaaaaaaacttttc-tatcttcatccatggatcctttact 218 Query: 544 cata 547 |||| Sbjct: 217 cata 214
>gb|DQ352339.1| Altingia poilanei voucher Ickert-Bond 1296 tRNA-Gly (trnG) gene, intron; chloroplast Length = 647 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 647 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 589 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 |||||||||||||||||| ||||||||||||| ||||||||| |||| ||||||| Sbjct: 396 atcctgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagta 337 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||||||| ||||||| ||||||||| ||||| Sbjct: 336 aaccaaagtcatcgtttaatagctattttgcttc 303 Score = 56.0 bits (28), Expect = 2e-04 Identities = 56/64 (87%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| |||| || |||| ||||||||||||| ||||||||||| Sbjct: 276 gaagatttagttacgattagaaaaaaaacttttc-tatcttcatccatggatcctttact 218 Query: 544 cata 547 |||| Sbjct: 217 cata 214
>gb|DQ352338.1| Altingia obovata voucher Ickert-Bond 1356_5 tRNA-Gly (trnG) gene, intron; chloroplast Length = 638 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 638 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 580 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 394 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 335 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 334 aaagtcatcgtttaatagctattttgcttc 305 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||||||||||||||| Sbjct: 247 ttttatatcttcatccatggatcctttactcata 214
>gb|DQ352337.1| Altingia obovata voucher Ickert-Bond 1372 tRNA-Gly (trnG) gene, intron; chloroplast Length = 649 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 649 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 591 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 394 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 335 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 334 aaagtcatcgtttaatagctattttgcttc 305 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||||||||||||||| Sbjct: 247 ttttatatcttcatccatggatcctttactcata 214
>gb|DQ352336.1| Altingia gracilipes voucher Ickert-Bond 1379 tRNA-Gly (trnG) gene, intron; chloroplast Length = 647 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 647 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 589 Score = 63.9 bits (32), Expect = 7e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaatcaacttttttgtatcttcatccatagatcctttact 543 |||||||||||||||||| |||| || |||| ||||||||||||| ||||||||||| Sbjct: 277 gaagatttagttacgattagaaaaaaaaacttttatatcttcatccatggatcctttact 218 Query: 544 cata 547 |||| Sbjct: 217 cata 214 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 393 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 334 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 333 aaagtcatcgtttaatagctattttgcttc 304
>gb|DQ352335.1| Altingia gracilipes voucher Ickert-Bond 1344 tRNA-Gly (trnG) gene, intron; chloroplast Length = 645 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 645 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 587 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 396 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 337 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 336 aaagtcatcgtttaatagctattttgcttc 307 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||||||||||||||| Sbjct: 247 ttttatatcttcatccatggatcctttactcata 214
>gb|DQ352333.1| Altingia obovata voucher Ickert-Bond 1366 tRNA-Gly (trnG) gene, intron; chloroplast Length = 638 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 638 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 580 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 394 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 335 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 334 aaagtcatcgtttaatagctattttgcttc 305 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||||||||||||||| Sbjct: 247 ttttatatcttcatccatggatcctttactcata 214
>gb|DQ352332.1| Altingia chinensis voucher Ickert-Bond 1294 tRNA-Gly (trnG) gene, intron; chloroplast Length = 641 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 641 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 583 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 394 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 335 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 334 aaagtcatcgtttaatagctattttgcttc 305 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||||||||||||||| Sbjct: 247 ttttatatcttcatccatggatcctttactcata 214
>gb|DQ352331.1| Altingia chinensis voucher Ickert-Bond 1261 tRNA-Gly (trnG) gene, intron; chloroplast Length = 650 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 650 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 592 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 395 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 336 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 335 aaagtcatcgtttaatagctattttgcttc 306 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||||||||||||||| Sbjct: 247 ttttatatcttcatccatggatcctttactcata 214
>gb|DQ352330.1| Semiliquidambar cathayensis voucher Ickert-Bond 1323 tRNA-Gly (trnG) gene, intron; chloroplast Length = 652 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 652 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 594 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 395 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 336 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 335 aaagtcatcgtttaatagctattttgcttc 306 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||||||||||||||| Sbjct: 247 ttttatatcttcatccatggatcctttactcata 214
>gb|DQ352329.1| Semiliquidambar cathayensis voucher Ickert-Bond 1322 tRNA-Gly (trnG) gene, intron; chloroplast Length = 651 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 651 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 593 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 395 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 336 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 335 aaagtcatcgtttaatagctattttgcttc 306 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||||||||||||||| Sbjct: 247 ttttatatcttcatccatggatcctttactcata 214
>gb|DQ352327.1| Semiliquidambar caudata voucher Ickert-Bond 1367 tRNA-Gly (trnG) gene, intron; chloroplast Length = 649 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 649 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 591 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 377 tgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagtaaacc 436 |||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| Sbjct: 394 tgaggaaaagaattttctttccaccgagctaaaacaatatatcgatgtctctagtaaacc 335 Query: 437 aaaactatcgttttttagctatttggcttc 466 ||| ||||||| ||||||||| ||||| Sbjct: 334 aaagtcatcgtttaatagctattttgcttc 305 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||||||||||||||| Sbjct: 247 ttttatatcttcatccatggatcctttactcata 214
>gb|DQ352326.1| Exbucklandia tonkinensis voucher Ickert-Bond 1269 tRNA-Gly (trnG) gene, intron; chloroplast Length = 650 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 164 taacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 650 taacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 592 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 373 atcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagta 432 |||||||||||||| ||| ||||||||||||| |||||||||| |||| ||||||| Sbjct: 399 atcctgaggaaaagcattttctttccaccgagctaaaacaatatgtcgatgtctctagta 340 Query: 433 aaccaaaactatcgttttttagctatttggcttc 466 ||||||| ||||||| ||||||||| ||||| Sbjct: 339 aaccaaagtcatcgtttaatagctattttgcttc 306 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 240 atctatgtcagcttttctatttgaatg 266 |||||||||||||||||| |||||||| Sbjct: 521 atctatgtcagcttttctgtttgaatg 495 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 514 ttttgtatcttcatccatagatcctttactcata 547 |||| ||||||||||||| ||| ||||||||||| Sbjct: 246 ttttctatcttcatccatggatactttactcata 213
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 20973 agcgggtagcgggaatcgaacccgcatcattagcttggaaggctaagggttatagtcga 21031 Score = 54.0 bits (27), Expect = 7e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 178 caaaaccgaacatgaaattttgatttcattcggctcctt 216 |||||||| |||||||||||| ||||||| ||||||||| Sbjct: 3225 caaaaccgtacatgaaatttttatttcatacggctcctt 3187
>emb|AJ007720.1|OMI007720 Orobanche minor chloroplast psbI gene, trnS(GCU) gene, intron containing pseudo-trnG(UUC) & trnR(UCU) gene Length = 934 Score = 101 bits (51), Expect = 3e-18 Identities = 54/55 (98%) Strand = Plus / Minus Query: 98 gggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcgacgttgg 152 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 679 gggaatcgaacccgcatcgttagcttggaaggctatgggttatagtcgacgttgg 625 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 408 aaacaatatgcggatggttctagtaaaccaaa 439 ||||||||||| ||| ||||||||||||||| Sbjct: 359 aaacaatatgctaatgattctagtaaaccaaa 328
>gb|M16866.1|PEACPTGGR Pea chloroplast gene encoding Gly-tRNA, 3' end, and Arg-tRNA Length = 835 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 88 agcgggtagcgggaatcgaacccgcatcgttagcttggaaggctaggggttatagtcga 146 |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 59 agcgggtagcgggaatcgaacccgcatcattagcttggaaggctaagggttatagtcga 1
>gb|AY727222.1| Eupatorium rotundifolium tRNA-Gly (trnG), intron; chloroplast Length = 727 Score = 99.6 bits (50), Expect = 1e-17 Identities = 59/62 (95%) Strand = Plus / Minus Query: 161 ttttaacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatg 220 |||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| Sbjct: 704 ttttaacgtctctaattcaaaaccgagcatgaaactttggtttcattcggctcctttatg 645 Query: 221 ga 222 || Sbjct: 644 ga 643 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taacatctatgtcagctttt 255 |||||||||||||||||||| Sbjct: 561 taacatctatgtcagctttt 542 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaat 507 |||||||||||||||||| ||||| Sbjct: 306 gaagatttagttacgattagaaat 283
>gb|AY727514.1| Minuartia cumberlandensis trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1284 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 137 ttatagtcgacgttggttgattatttttaacgtctctaattcaaaaccgaacatgaaatt 196 |||||||||||| || || | |||||||||||| ||||||||||||||||||||||| | Sbjct: 1284 ttatagtcgacgctgatttctcatttttaacgtcgctaattcaaaaccgaacatgaaact 1225 Query: 197 ttgatttcattcggctcctttatgga 222 || |||||||||||||||||||||| Sbjct: 1224 ttagtttcattcggctcctttatgga 1199
>gb|AY727512.1| Gratiola virginiana trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Minus Query: 165 aacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 1492 aacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 1435 Score = 46.1 bits (23), Expect = 0.16 Identities = 77/95 (81%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 |||||| |||||||| ||| ||||||||| |||| |||||||| | |||| | |||| Sbjct: 1242 gatcctaaggaaaagtattttgtttccaccaagctaaaacaataaggcgatgtctttagt 1183 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 1182 aaaccaaagtcatcgtttaatagctattttgcttc 1148 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaat 507 |||||||||||||||||| ||||| Sbjct: 1115 gaagatttagttacgattagaaat 1092
>gb|AY727511.1| Gratiola neglecta trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1537 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Minus Query: 165 aacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 1508 aacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 1451 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 372 gatcctgaggaaaagaattgggtttccaccgagctgaaacaatatgcggatggttctagt 431 |||||| |||||||| |||| ||||||||| |||| |||||||| | |||| | |||| Sbjct: 1254 gatcctaaggaaaaggattgtgtttccaccaagctaaaacaataaggcgatgtctttagt 1195 Query: 432 aaaccaaaactatcgttttttagctatttggcttc 466 |||||||| ||||||| ||||||||| ||||| Sbjct: 1194 aaaccaaagacatcgtttaatagctattttgcttc 1160 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaat 507 |||||||||||||||||| ||||| Sbjct: 1126 gaagatttagttacgattagaaat 1103
>gb|AY727510.1| Gratiola brevifolia trnS-trnG intergenic spacer and tRNA-Gly (trnG) gene, partial sequence; chloroplast Length = 1500 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Minus Query: 165 aacgtctctaattcaaaaccgaacatgaaattttgatttcattcggctcctttatgga 222 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 1471 aacgtctctaattcaaaaccgaacatgaaactttggtttcattcggctcctttatgga 1414 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gaagatttagttacgattggaaat 507 |||||||||||||||||| ||||| Sbjct: 1086 gaagatttagttacgattagaaat 1063 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,174,194 Number of Sequences: 3902068 Number of extensions: 8174194 Number of successful extensions: 186439 Number of sequences better than 10.0: 1141 Number of HSP's better than 10.0 without gapping: 1145 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 178286 Number of HSP's gapped (non-prelim): 7883 length of query: 715 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 692 effective length of database: 17,143,297,704 effective search space: 11863162011168 effective search space used: 11863162011168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
