ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags31f13 |
|---|---|
| Clone Library Name | barley_pub |
>GANAB_MOUSE (Q8BHN3) Neutral alpha-glucosidase AB precursor (EC 3.2.1.84)| (Glucosidase II alpha subunit) (Alpha glucosidase 2) Length = 944 Score = 33.1 bits (74), Expect = 0.62 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -1 Query: 455 ETQVPVEA--AAETNTPAQGDKPDEVKREAEKDNP 357 E++ P E A TP GDKP+E + +AEKD P Sbjct: 189 ESKDPAEGNGAQPEATPGDGDKPEETQEKAEKDEP 223
>HIPK1_MOUSE (O88904) Homeodomain-interacting protein kinase 1 (EC 2.7.11.1)| (Protein kinase Myak) (Nuclear body-associated kinase 2) Length = 1210 Score = 32.7 bits (73), Expect = 0.81 Identities = 17/35 (48%), Positives = 18/35 (51%) Frame = +2 Query: 395 ACLLELEY*FQQQPPLELEFHPRLFPAAAQLPQQP 499 A L + Y FQ PL HP L PA A LP QP Sbjct: 1075 APLSQAPYAFQHGSPLHSTGHPHLAPAPAHLPSQP 1109
>GANAB_HUMAN (Q14697) Neutral alpha-glucosidase AB precursor (EC 3.2.1.84)| (Glucosidase II alpha subunit) Length = 944 Score = 32.7 bits (73), Expect = 0.81 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -1 Query: 461 GDETQVPVEAAAETNTPAQGDKPDEVKREAEKDNP 357 G + + A TP GDKP+E + +AEKD P Sbjct: 189 GSKDPAEGDGAQPEETPRDGDKPEETQGKAEKDEP 223
>GANAB_PIG (P79403) Neutral alpha-glucosidase AB precursor (EC 3.2.1.84)| (Glucosidase II alpha subunit) Length = 944 Score = 32.3 bits (72), Expect = 1.1 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -1 Query: 461 GDETQVPVEAAAETNTPAQGDKPDEVKREAEKDNP 357 G + + A P GDKP+E++ +AEKD P Sbjct: 189 GSKDPAEGDGAQPEEAPGDGDKPEEIQGKAEKDEP 223
>TILS_TROWT (Q83MT2) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 415 Score = 30.0 bits (66), Expect = 5.3 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = -2 Query: 358 PRTESTSWASSP*C--LRGSAPQLTRRKTSSVFRVAELPDLSICLHEN*MACIWGACGVD 185 PR E+ S+ P C + GSA + T S F V P L I HE C + G+D Sbjct: 211 PRNENRSYFPHPSCKCVEGSATRFTNADIDSRFGVFIRPFLDITRHETGKICEF--YGLD 268 Query: 184 GW 179 W Sbjct: 269 YW 270
>HIPK1_HUMAN (Q86Z02) Homeodomain-interacting protein kinase 1 (EC 2.7.11.1)| Length = 1210 Score = 30.0 bits (66), Expect = 5.3 Identities = 16/34 (47%), Positives = 17/34 (50%) Frame = +2 Query: 395 ACLLELEY*FQQQPPLELEFHPRLFPAAAQLPQQ 496 A L + Y FQ PL HP L PA A LP Q Sbjct: 1075 APLSQAPYTFQHGSPLHSTGHPHLAPAPAHLPSQ 1108
>TILS_TROW8 (Q83I94) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 407 Score = 30.0 bits (66), Expect = 5.3 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = -2 Query: 358 PRTESTSWASSP*C--LRGSAPQLTRRKTSSVFRVAELPDLSICLHEN*MACIWGACGVD 185 PR E+ S+ P C + GSA + T S F V P L I HE C + G+D Sbjct: 203 PRNENRSYFPHPSCKCVEGSATRFTNADIDSRFGVFIRPFLDITRHETGKICEF--YGLD 260 Query: 184 GW 179 W Sbjct: 261 YW 262
>ALBU_RAT (P02770) Serum albumin precursor| Length = 608 Score = 30.0 bits (66), Expect = 5.3 Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 14/73 (19%) Frame = -1 Query: 464 TGDETQVPVEAAAETNT-----PAQGDKPDEVKR-----EAEKDNPKNRID----FVGFF 327 T DET VP E AET T DK ++K+ E K PK D +G F Sbjct: 516 TVDETYVPKEFKAETFTFHSDICTLPDKEKQIKKQTALAELVKHKPKATEDQLKTVMGDF 575 Query: 326 AMMFERFCSPADK 288 A ++ C ADK Sbjct: 576 AQFVDKCCKAADK 588
>SOX7_HUMAN (Q9BT81) Transcription factor SOX-7| Length = 388 Score = 30.0 bits (66), Expect = 5.3 Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 5/52 (9%) Frame = +2 Query: 401 LLELEY*FQQQPPLELEFHPRLFPAAAQLPQQPEFLPRP-----GLGCLSLG 541 +LE E F P E HPR P P PE+ P P LG L+LG Sbjct: 212 VLEPEQTFFSSPCQEEHGHPRRIPHLPGHPYSPEYAPSPLHCSHPLGSLALG 263
>FLVC1_MUSDU (Q9ES43) Feline leukemia virus subgroup C receptor-related protein| 1 Length = 560 Score = 29.6 bits (65), Expect = 6.9 Identities = 18/58 (31%), Positives = 28/58 (48%) Frame = -3 Query: 372 RERQPQEPNRLRGLLRHDV*EVLLPS*QEERLVPSSVWQSCRIYPFVFMKTEWPAYGV 199 +E+ P P++ + +LR S EE SS+W CR PFV + +YG+ Sbjct: 302 KEKPPLPPSQAQAILRD--------SPPEEYSYKSSIWNLCRNIPFVLLLV---SYGI 348
>RL12_AERPE (Q9Y9W9) 50S ribosomal protein L12P| Length = 111 Score = 29.6 bits (65), Expect = 6.9 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = -1 Query: 446 VPVEAAAETNTPAQGDKPDEVKREAEKDNPKNRIDFVGFFAM 321 V AAA PA +K +E K+E E++ + +D G M Sbjct: 67 VAAAAAAPAAAPAAEEKAEEEKKEEEEEKKEEEVDLSGLSGM 108
>NFAT5_HUMAN (O94916) Nuclear factor of activated T-cells 5 (T-cell transcription| factor NFAT5) (NF-AT5) (Tonicity-responsive enhancer-binding protein) (TonE-binding protein) (TonEBP) Length = 1531 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/37 (45%), Positives = 19/37 (51%) Frame = +2 Query: 422 FQQQPPLELEFHPRLFPAAAQLPQQPEFLPRPGLGCL 532 FQQQ P+ P L AQ PQQ F P+ LG L Sbjct: 1182 FQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSL 1218 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,367,890 Number of Sequences: 219361 Number of extensions: 1491439 Number of successful extensions: 4167 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3959 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4163 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
